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Tytuł pozycji:

Annotating the human proteome: the Human Proteome Survey Database (HumanPSD) and an in-depth target database for G protein-coupled receptors (GPCR-PD) from Incyte Genomics.

Tytuł :
Annotating the human proteome: the Human Proteome Survey Database (HumanPSD) and an in-depth target database for G protein-coupled receptors (GPCR-PD) from Incyte Genomics.
Autorzy :
Hodges PE; Incyte Genomics, Proteome Division, 100 Cummings Center, Suite 435M, Beverly, MA 01915, USA. />Carrico PM
Hogan JD
O'Neill KE
Owen JJ
Mangan M
Davis BP
Brooks JE
Garrels JI
Pokaż więcej
Źródło :
Nucleic acids research [Nucleic Acids Res] 2002 Jan 01; Vol. 30 (1), pp. 137-41.
Typ publikacji :
Journal Article
Język :
English
Imprint Name(s) :
Publication: 1992- : Oxford : Oxford University Press
Original Publication: London, Information Retrieval ltd.
MeSH Terms :
Databases, Protein*
Heterotrimeric GTP-Binding Proteins/*metabolism
Proteome/*genetics
Receptors, Cell Surface/*genetics
Amino Acid Sequence ; Animals ; Humans ; Information Storage and Retrieval ; Internet ; Ligands ; Mice ; Mutation ; Phenotype ; Protein Structure, Tertiary ; Proteome/chemistry ; Proteome/physiology ; Rats ; Receptors, Cell Surface/chemistry ; Receptors, Cell Surface/physiology ; Sequence Alignment ; Signal Transduction ; Vocabulary, Controlled
References :
Nucleic Acids Res. 2000 Jan 1;28(1):45-8. (PMID: 10592178)
Nucleic Acids Res. 2000 Jan 1;28(1):73-6. (PMID: 10592185)
Nucleic Acids Res. 2000 Jan 1;28(1):235-42. (PMID: 10592235)
Nucleic Acids Res. 2000 Jan 1;28(1):263-6. (PMID: 10592242)
Nature. 2001 Feb 15;409(6822):860-921. (PMID: 11237011)
Nat Genet. 2000 May;25(1):25-9. (PMID: 10802651)
Nucleic Acids Res. 2001 Jan 1;29(1):29-32. (PMID: 11125041)
Nucleic Acids Res. 2001 Jan 1;29(1):137-40. (PMID: 11125071)
Science. 2001 Feb 16;291(5507):1304-51. (PMID: 11181995)
Trends Genet. 2000 Jan;16(1):44-7. (PMID: 10637631)
Substance Nomenclature :
0 (Ligands)
0 (Proteome)
0 (Receptors, Cell Surface)
EC 3.6.5.1 (Heterotrimeric GTP-Binding Proteins)
Entry Date(s) :
Date Created: 20011226 Date Completed: 20020121 Latest Revision: 20190501
Update Code :
20210623
PubMed Central ID :
PMC99168
DOI :
10.1093/nar/30.1.137
PMID :
11752275
Czasopismo naukowe
The Proteome Division of Incyte Genomics has released new volumes to the BioKnowledge Library to add human, mouse and rat protein information to its rich collection of model organism Proteome Databases. The Human Proteome Survey Database (HumanPSD) compiles the fundamental properties of more than 25 000 characterized mammalian proteins. HumanPSD includes clear, concise and current protein descriptions (Title Lines), the protein sequence, calculated physical properties, precomputed BLAST alignments, controlled-vocabulary protein properties and Gene Ontology terms, and a list of published references. Each report also contains expression data, Pfam domain information and an associated Mouse Mutant Phenotype section describing behavioral, physiological and cellular phenotypes for over 1500 mouse mutant phenotypes. GPCR-PD contains more than 3200 Protein Reports from the three mammalian species for G protein-coupled receptors, their protein ligands, associated G-proteins and their downstream signaling proteins. In addition to the features described above, each GPCR-PD Protein Report displays annotations of experimental findings from over 10 000 publications. These databases provide important new volumes of Proteome's BioKnowledge Library (http://www.incyte.com), integrating protein information from model organisms with the human proteome.

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