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Tytuł pozycji:

Phylogenetic analysis of brine shrimp (Artemia) in China using DNA barcoding.

Tytuł:
Phylogenetic analysis of brine shrimp (Artemia) in China using DNA barcoding.
Autorzy:
Wang W; Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100029, China.
Luo Q
Guo H
Bossier P
Van Stappen G
Sorgeloos P
Xin N
Sun Q
Hu S
Yu J
Źródło:
Genomics, proteomics & bioinformatics [Genomics Proteomics Bioinformatics] 2008 Dec; Vol. 6 (3-4), pp. 155-62.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
Język:
English
Imprint Name(s):
Original Publication: Beijing, China : Science Press and Elsevier
MeSH Terms:
Phylogeny*
Artemia/*genetics
DNA, Mitochondrial/*genetics
Electron Transport Complex IV/*genetics
Animals ; Artemia/classification ; Base Sequence ; China ; DNA, Mitochondrial/chemistry ; Genetic Variation ; Molecular Sequence Data ; Selection, Genetic ; Sequence Analysis, DNA ; Sequence Homology, Nucleic Acid ; Tibet
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Substance Nomenclature:
0 (DNA, Mitochondrial)
EC 1.9.3.1 (Electron Transport Complex IV)
Entry Date(s):
Date Created: 20090331 Date Completed: 20090529 Latest Revision: 20211020
Update Code:
20240104
PubMed Central ID:
PMC5054130
DOI:
10.1016/S1672-0229(09)60003-6
PMID:
19329066
Czasopismo naukowe
DNA barcoding is a powerful approach for characterizing species of organisms, especially those with almost identical morphological features, thereby helping to to establish phylogenetic relationships and reveal evolutionary histories. In this study, we chose a 648-bp segment of the mitochondrial gene, cytochrome c oxidase subunit 1 (COI), as a standard barcode region to establish phylogenetic relationships among brine shrimp (Artemia) species from major habitats around the world and further focused on the biodiversity of Artemia species in China, especially in the Tibetan Plateau. Samples from five major salt lakes of the Tibetan Plateau located at altitudes over 4,000 m showed clear differences from other Artemia populations in China. We also observed two consistent amino acid changes, 153A/V and 183L/F, in the COI gene between the high and low altitude species in China. Moreover, indels in the COI sequence were identified in cyst and adult samples unique to the Co Qen population from the Tibetan Plateau, demonstrating the need for additional investigations of the mitochondrial genome among Tibetan Artemia populations.

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