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Tytuł pozycji:

New Frontiers for Site-Directed RNA Editing: Harnessing Endogenous ADARs.

Tytuł:
New Frontiers for Site-Directed RNA Editing: Harnessing Endogenous ADARs.
Autorzy:
Merkle T; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany.
Stafforst T; Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany. .
Źródło:
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2181, pp. 331-349.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
Język:
English
Imprint Name(s):
Publication: Totowa, NJ : Humana Press
Original Publication: Clifton, N.J. : Humana Press,
MeSH Terms:
Adenosine Deaminase/*physiology
Mutagenesis, Site-Directed/*methods
RNA Editing/*physiology
RNA-Binding Proteins/*physiology
A549 Cells ; Adenosine Deaminase/genetics ; Cells, Cultured ; HEK293 Cells ; HeLa Cells ; Hep G2 Cells ; Humans ; Mutagenesis, Site-Directed/trends ; RNA-Binding Proteins/genetics
Contributed Indexing:
Keywords: ADAR; Antisense oligonucleotide; In vitro transcription—therapeutic RNA editing; RESTORE; RNA editing; RNA ligation; Site-directed RNA editing
Substance Nomenclature:
0 (RNA-Binding Proteins)
EC 3.5.4.37 (ADAR protein, human)
EC 3.5.4.4 (Adenosine Deaminase)
Entry Date(s):
Date Created: 20200731 Date Completed: 20210226 Latest Revision: 20210226
Update Code:
20240104
DOI:
10.1007/978-1-0716-0787-9_19
PMID:
32729089
Czasopismo naukowe
RNA editing activity can be exploited for the restoration of disease-causing nonsense and missense mutations and as a tool to manipulate the transcriptome in a simple and programmable way. The general concept is called site-directed RNA editing and has high potential for translation into the clinics. Due to its different mode of action RNA editing may well complement gene editing and other gene therapy options. In this method chapter, we particularly highlight RNA editing strategies that harness endogenous ADARs. Such strategies circumvent the delivery and expression of engineered editases and are notably precise and simple. This is particularly true if endogenous ADARs are recruited with chemically modified antisense oligonucleotides, an approach we call RESTORE (recruiting endogenous ADAR to specific transcripts for oligonucleotide-mediated RNA editing). To foster the research and development of RESTORE we now report a detailed protocol for the procedure of editing reactions, and a protocol for the generation of partly chemically modified RESTORE ASOs with a combination of in vitro transcription and ligation.

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