Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN.

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Tytuł:: Complete Genome Sequence of Lactobacillus hilgardii LMG 7934, Carrying the Gene Encoding for the Novel PII-Like Protein PotN.
Autorzy:: Zhuravleva DE; Kazan Federal University, Kazan, Russia.
Iskhakova ZI; Kazan Federal University, Kazan, Russia.
Ozhegov GD; Kazan Federal University, Kazan, Russia.
Gogoleva NE; Kazan Federal University, Kazan, Russia.; Kazan Institute of Biochemistry and Biophysics, Kazan Science Centre, Russian Academy of Sciences, Kazan, Russia.
Khusnutdinova DR; Kazan Federal University, Kazan, Russia.
Shagimardanova EI; Kazan Federal University, Kazan, Russia.
Forchhammer K; Eberhard Karls University Tübingen, Tübingen, Germany.
Kayumov AR; Kazan Federal University, Kazan, Russia. .
Źródło:: Current microbiology [Curr Microbiol] 2020 Nov; Vol. 77 (11), pp. 3538-3545. Date of Electronic Publication: 2020 Aug 14.
Typ publikacji:: Journal Article
Język:: English
Imprint Name(s):: Original Publication: New York, Springer International.
MeSH Terms:: Lactobacillus*/genetics
Operon*
Bacterial Proteins/genetics ; Base Sequence
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Grant Information:: MD- 572.2020.4 Council on grants of the President of the Russian Federation; EXC 2124 Deutsche Forschungsgemeinschaft; 075-02-2020-1478 Ministry of science and higher education of Russian Federation
Substance Nomenclature:: 0 (Bacterial Proteins)
SCR Organism:: Lactobacillus hilgardii
Entry Date(s):: Date Created: 20200818 Date Completed: 20210514 Latest Revision: 20211208
Update Code:: 20240105
DOI:: 10.1007/s00284-020-02161-6
PMID:: 32803419
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Lactic acid bacteria are widespread in various ecological niches with the excess of nutrients and have reduced capabilities to adapt to starvation. Among more than 280 Lactobacillus species known to the date, only five, including Lactobacillus hilgardii, carry in their genome the gene encoding for PII-like protein, one of the central regulators of cellular metabolism generally responding to energy- and carbon-nitrogen status in many free-living Bacteria, Archaea and in plant chloroplasts. In contrast to the classical PII encoding genes, in L. hilgardii genome the gene for PII homologue is located within the potABCD operon, encoding the ABC transporter for polyamines. Based on the unique genetic context and low sequence identity with genes of any other so-far characterized PII subfamilies, we termed this gene potN (Pot-protein, Nucleotide-binding). The second specific feature of L. hilgardii genome is that many genes encoding the proteins with similar function are present in two copies, while with low mutual identity. Thus, L. hilgardii LMG 7934 genome carries two genes of glutamine synthetase with 55% identity. One gene is located within classical glnRA operon with the gene of GlnR-like transcriptional regulator, while the second is monocistronic. Together with the relative large genome of L. hilgardii as compared to other Lactobacilli (2.771.862 bp vs ~ 2.2 Mbp in median), these data suggest significant re-arrangements of the genome and a wider range of adaptive capabilities of L. hilgardii in comparison to other bacteria of the genus Lactobacillus.

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