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Tytuł pozycji:

Using genetic evaluation to guide conservation of remnant Juniperus communis (Cupressaceae) populations.

Tytuł:
Using genetic evaluation to guide conservation of remnant Juniperus communis (Cupressaceae) populations.
Autorzy:
Jacquemart AL; Earth and Life Institute-Agronomy - UCLouvain, Croix du Sud 2, Box L7.05.14, B-1348, Louvain-la-Neuve, Belgium.
Buyens C; Earth and Life Institute-Agronomy - UCLouvain, Croix du Sud 2, Box L7.05.14, B-1348, Louvain-la-Neuve, Belgium.
Delescaille LM; Direction générale opérationnelle Agriculture, Ressources naturelles et Environnement (DGARNE), Département de l'Etude du Milieu naturel et agricole (DEMNA), Avenue Maréchal Juin 23, B-5030, Gembloux, Belgium.
Van Rossum F; Meise Botanic Garden, Nieuwelaan 38, B-1860, Meise, Belgium.; Fédération Wallonie-Bruxelles, Rue A. Lavallée 1, B-1080, Brussels, Belgium.
Źródło:
Plant biology (Stuttgart, Germany) [Plant Biol (Stuttg)] 2021 Jan; Vol. 23 (1), pp. 193-204. Date of Electronic Publication: 2020 Oct 26.
Typ publikacji:
Journal Article
Język:
English
Imprint Name(s):
Publication: Oxford, England : Wiley
Original Publication: Stuttgart : New York, NY : G. Thieme Verlag ; Thieme New York, c1999-
MeSH Terms:
Conservation of Natural Resources*
Genetics, Population*
Juniperus*/genetics
Belgium ; Europe ; Microsatellite Repeats ; Polymorphism, Single Nucleotide
References:
Aguilar R., Ashworth L., Galetto L., Aizen M.A. (2006) Plant reproductive susceptibility to habitat fragmentation: review and synthesis through a meta-analysis. Ecology Letters, 9, 968-980.
Aguilar R., Quesada M., Ashworth L., Herrerias-Diego Y., Lobo J. (2008) Genetic consequences of habitat fragmentation in plant populations: susceptible signals in plant traits and methodological approaches. Molecular Ecology, 17, 5177-5188.
Angeloni F., Ouborg N.J., Leimu R. (2011) Meta-analysis on the association of population size and life history with inbreeding depression in plants. Biological Conservation, 144, 35-43.
Basey A.C., Fant J.B., Kramer A.T. (2015) Producing native plant materials for restoration: 10 rules to collect and maintain genetic diversity. Native Plants Journal, 16, 37-53.
Berjano R., Gauthier P., Fisogni A., Doblas D., Pons V., Thompson J.D. (2013) Mate limitation in populations of the endangered Convolvulus lineatus L.: a case for genetic rescue? Journal of Nature Conservation, 21, 334-341.
Bettencourt S.X., Mendonça D., Lopes M.S., Rocha S., Monjardino P., Monteiro L., da Câmara A. (2015) Genetic diversity and population structure of the endemic Azorean juniper, Juniperus brevifolia (Seub.) Antoine, inferred from SSRs and ISSR markers. Biochemical Systematics and Ecology, 59, 314-324.
Betz C., Scheuerer M., Reisch C. (2013) Population reinforcement - a glimmer of hope for the conservation of the highly endangered Spring Pasque flower (Pulsatilla vernalis). Biological Conservation, 168, 161-167.
Bowles M.L., McBride J.L., Bell T.J. (2015) Long-term processes affecting restoration and viability of the federal threatened Mead’s milkweed (Asclepias meadii). Ecosphere, 6, 11.
Breed M.F., Marklund M.H.K., Ottewell K.M., Gardner M.G., Harris J.B.C., Lowe A.J. (2012) Pollen diversity matters: Revealing the neglected effect of pollen diversity on fitness in fragmented landscapes. Molecular Ecology, 21, 5955-5968.
Broome A., Long D., Ward L.K., Park K.J. (2017) Promoting natural regeneration for the restoration of Juniperus communis: a synthesis of knowledge and evidence for conservation practitioners. Applied Vegetation Science, 20, 397-409.
Cavalli-Sforza L.L., Edwards A.W.F. (1967) Phylogenetic analysis: models and estimation procedures. American Journal of Human Genetics, 19, 233-257.
Chapuis M.-P., Estoup A. (2007) Microsatellite null alleles and estimation of population differentiation. Molecular Biology and Evolution, 24, 621-631.
Chybicki I.J., Burczyk J. (2009) Simultaneous estimation of null alleles and inbreeding coefficients. Journal of Heredity, 100, 106-113.
Colas B., Kirchner F., Riba M., Olivieri I., Mignot A., Imbert E., Beltrame C., Carbonell D., Fréville H. (2008) Restoration demography: a 10-year demographic comparison between introduced and natural populations of endemic Centaurea corymbosa (Asteraceae). Journal of Applied Ecology, 45, 1468-1476.
De Vriendt L., Lemay M.-A., Jean M., Renaut S., Pellerin S., Joly S., Belzile F., Poulin M. (2017) Population isolation shapes plant genetics, phenotype and germination in naturally patchy ecosystems. Journal of Plant Ecology, 10, 649-659.
Delescaille L.-M. (2015) Observations sur la régénération du genévrier commun (Juniperus communis L.) dans la région de Lesse et Lomme (communes de Tellin et Rochefort). Parcs Nationaux, 70, 16-25.
Dell Inc. (2015) STATISTICA (data analysis software system), version 12. Available from http:www.statsoft.com (accessed August 2019).
Earl D.A., von Holdt B.M. (2012) STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conservation Genetics Resources, 4, 359-361.
Edmands S. (2007) Between a rock and a hard place: evaluating the relative risks of inbreeding and outbreeding for conservation and management. Molecular Ecology, 16, 463-475.
Evanno G., Regnaut S., Goudet J. (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology, 14, 2611-2620.
Falush D., Stephens M., Pritchard J.K. (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Molecular Ecology Notes, 7, 574-578.
Farwig N., Böhning-Gaese K., Bleher B. (2006) Enhanced seed dispersal of Prunus africana in fragmented and disturbed forests? Oecologia, 147, 238-252.
Frankham R., Ballou J.D., Briscoe D.A. (2004) A primer of conservation genetics. Cambridge University Press, Cambridge, UK, p 220.
García D. (2001) Effects of seed dispersal on Juniperus communis recruitment on a Mediterranean mountain. Acta Oecologica, 19, 517-525.
García D., Zamora R., Gómez J.M., Hódar J.A. (1999) Bird rejection of unhealthy fruits reinforces the mutualism between juniper and its avian dispersers. Oikos, 85, 536-544.
Gentili R., Solari A., Diekmann M., Duprè C., Monti G.S., Armiraglio S., Assini S., Citterio S. (2018) Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb. PeerJ, 6, e4929.
Godefroid S., Le Pajolec S., Van Rossum F. (2016) Pre-translocation considerations in rare plant reintroductions: implications for designing protocols. Plant Ecology, 217, 169-182.
Godefroid S., Piazza C., Rossi G., Buord S., Stevens A.-D., Aguraiuja R., Cowell C., Weekley C. W., Vogg G., Iriondo J. M., Johnson I., Dixon B., Gordon D., Magnanon S., Valentin B., Bjureke K., Koopman R., Vicens M., Virevaire M., Vanderborght T. (2011) How successful are plant species reintroductions? Biological Conservation, 144, 672-682.
Goudet J. (2003) Fstat (version 2.9.4), a program to estimate and test population genetics parameters. Updated from Goudet (1995). Available from http://www.unil.ch/izea/softwares/fstat.html (accessed October 2019).
Gruwez R., De Frenne P., De Schrijver A., Leroux O., Vangansbeke P., Verheyen K. (2014) Negative effects of temperature and atmospheric depositions on the seed viability of common juniper (Juniperus communis). Annals of Botany, 113, 489-500.
Gruwez R., Leroux O., De Frenne P., Tack W., Viane R., Verheyen K.(2013) Critical phases in the seed development of common juniper (Juniperus communis). Plant Biology, 15, 210-219.
Hardy O.J., Vekemans X. (2002) SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Molecular Ecology Notes, 2, 618-620.
Hufford K.M., Mazer S.J. (2003) Plant ecotypes: genetic differentiation in the age of ecological restoration. Trends in Ecology & Evolution, 18, 147-155.
Jakobsson M., Rosenberg N.A. (2007) CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics, 23, 1801-1806.
Keller L.F., Waller D.M. (2002) Inbreeding effects in wild populations. Trends in Ecology & Evolution, 17, 230-241.
Kramer A.T., Ison J.L., Ashley M.V., Howe H.F. (2008) The paradox of forest fragmentation genetics. Conservation Biology, 22, 878-885.
Maschinski J., Albrecht M.A. (2017) Center for Plant Conservation's Best Practice Guidelines for the reintroduction of rare plants. Plant Diversity, 39, 390-395.
Maschinski J., Wright S.J., Koptur S., Pinto-Torres E.C. (2013) When is local the best paradigm? Breeding history influences conservation reintroduction survival and population trajectories in times of extreme climate events. Biological Conservation, 159, 277-284.
McCartan S.A., Gosling P.G. (2013) Guidelines for seed collection and stratification of common juniper (Juniperus communis L.). Tree Planter's Notes, 26, 24-29.
McKay J.K., Christian C.E., Harrison S., Rice K.J. (2005) ‘How local is local?’ - A review of practical and conceptual issues in the genetics of restoration. Restoration Ecology, 13, 432-440.
Menges E.S. (2008) Restoration demography and genetics of plants: when is a translocation successful? Australian Journal of Botany, 56, 187-196.
Michalczyk I.M., Sebastiani F., Buonamici A., Cremer E., Mengel C., Ziegenhagen B., Vendramin G.G. (2006) Characterization of highly polymorphic nuclear microsatellite loci in Juniperus communis L. Molecular Ecology Resources, 6, 346-348.
Naydenov K., Tremblay M.F., Fenton N. (2005) Chloroplast microsatellite differentiation in jack pine (Pinus banksiana) populations in Quebec. Belgian Journal of Botany, 138, 181-191.
Nei M. (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583-590.
Nei M., Chesser R.K. (1983) Estimation of fixation indices and diversities. Annals of Human Genetics, 47, 253-259.
Oostermeijer J.G.B., De Knegt B. (2004) Genetic population structure of the wind-pollinated, dioecious shrub Juniperus communis in fragmented Dutch heathlands. Plant Species Biology, 19, 175-184.
Orsenigo S., Gentili R., Smolders A.J.P., Efremov A., Rossi G., Ardenghi N.M.G., Citterio S., Abeli T. (2017) Reintroduction of a dioecious aquatic macrophyte (Stratiotes aloides L.) regionally extinct in the wild. Interesting answers from genetics. Aquatic Conservation: Marine and Freshwater Ecosystems, 27, 10-23.
Ottewell K.M., Bickerton D.C., Byrne M., Lowe A.J. (2016) Bridging the gap: a genetic assessment framework for population-level threatened plant conservation prioritization and decision-making. Diversity and Distribution, 22, 174-188.
Pack D.A. (1921) After-ripening and germination of Juniperus seeds. Botanical Gazette, 71, 32-60.
Parks J.C., Werth C.R. (1993) A study of spatial features of clones in a population of bracken fern, Pteridium aquilinum (Dennstaedtiaceae). American Journal of Botany, 80, 537-544.
Peakall R., Smouse P. (2012) GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research - an update. Bioinformatics, 28, 2537-2539.
Pers-Kamczyc E., Tyrala-Wierucka Z., Rabska M., Wrońska-Pilarek D., Kamczyc J. (2020) The higher availability of nutrients increases the production but decreases the quality of pollen grains in Juniperus communis L. Journal of Plant Physiology, 248, 153156.
Petit R.J., Dumimil J., Fineschi S., Hampe A., Salvini D., Vendramin G.G. (2005) Comparative organization of chloroplast, mitochondrial and nuclear diversity in plant populations. Molecular Ecology, 14, 689-701.
Pritchard J.K., Stephens M., Donnelly P. (2000) Inference of population structure using multilocus genotype data. Genetics, 155, 949-959.
Provan J., Beatty G.E., Hunter A.M., McDonald R.A., McLaughlin E., Preston S.J., Wilson S. (2008) Restricted gene flow in fragmented populations of a wind-pollinated tree. Conservation Genetics, 9, 1521-1532.
Raabová J., Van Rossum F., Jacquemart A.-L., Raspé O. (2015) Population size affects genetic diversity and fine-scale spatial genetic structure in the clonal distylous herb Menyanthes trifoliata. Perspectives in Plant Ecology, Systematics and Evolution, 17, 193-200.
Rambaut A. (2016) FigTree Tree Figure Drawing Tool Version 1.4.3. Available from http://tree.bio.ed.ac.uk/software/figtree/.
Rascle P., Bioret F., Magnanon S., Glemarec E., Gautier C., Guillevic Y., Gallet S. (2018) Identification of success factors for the reintroduction of the critically endangered species Eryngium viviparum J. Gay (Apiaceae). Ecological Engineering, 122, 112-119.
Rassart A. (2019) Etude des causes du déclin du genévrier en Région wallonne. Master thesis, Université Catholique de Louvain.
Reim S., Lochschmidt F., Proft A., Tröber U., Wolf H. (2016) Genetic structure and diversity in Juniperus communis populations in Saxony, Germany. Biodiversity: Research and Conservation, 42, 9-18.
Rice W.R. (1989) Analysing tables of statistical tests. Evolution, 43, 223-225.
Richardson B.A., Brunsfield J., Klopfenstein N.B. (2002) DNA from bird dispersed seed and wind-disseminated pollen provides insights into postglacial colonization and population genetic structure of whitebark pine (Pinus albicaulis). Molecular Ecology, 11, 215-227.
Ritland C., Pape T., Ritland K. (2001) Genetic structure of yellow cedar (Chamaecyparis nootkatensis). Canadian Journal of Botany, 79, 822-828.
Rosenberg N.A. (2004) DISTRUCT: a program for the graphical display of population structure. Molecular Ecology Notes, 4, 137-138.
Rozenfeld A.F., Arnaud-Haond S., Hernández-García E., Eguíluz V.M., Matías M.A., Serrão E., Duarte C.M. (2007) Spectrum of genetic diversity and networks of clonal organisms. Journal of the Royal Society Interface, 4, 1093-1102.
Sgrò C.M., Andrew J., Lowe A.J., Hoffmann A.A. (2011) Building evolutionary resilience for conserving biodiversity under climate change. Evolutionary Applications, 4, 326-337.
Somme L., Mayer C., Raspé O., Jacquemart A.-L. (2014) Influence of spatial distribution and size of clones on the realized outcrossing rate of the marsh cinquefoil (Comarum palustre). Annals of Botany, 113, 477-487.
Thomas P.A., El-Barghathi M., Polwart A. (2007) Biological flora of the British Isles: Juniperus communis L. Journal of Ecology, 95, 1404-1440.
Tylkowski T. (2009) Improving seed germination and seedling emergence in the Juniperus communis. Dendrobiology, 61, 47-53.
Van der Merwe M., Winfield M.O., Arnold G.M., Parker J.S. (2000) Spatial and temporal aspects of the genetic structure of Juniperus communis populations. Molecular Ecology, 9, 379-386.
Van Geert A., Van Rossum F., Triest L. (2008) Genetic diversity in adult and seedling populations of Primula vulgaris in a fragmented agricultural landscape. Conservation Genetics, 9, 845-853.
Van Geert A., Van Rossum F., Triest L. (2015) Perspectives for genetic rescue of the extremely fragmented Primula vulgaris populations in The Netherlands: reflecting the future of Belgian populations? Plant Ecology and Evolution, 148, 329-334.
Van Rossum F. (2008) Conservation of long-lived perennial forest herbs in an urban context: Primula elatior as study case. Conservation Genetics, 9, 119-128.
Van Rossum F., Michez D., Van der Beeten I., Van de Vyver A., Robb L., Raspé O. (2017) Preserving the only endemic vascular plant taxon in Belgium in a highly anthropogenic landscape. Plant Ecology and Evolution, 150, 4-12.
Van Rossum F., Raspé O. (2018) Contribution of genetics for implementing population translocation of the threatened Arnica montana. Conservation Genetics, 19, 1185-1198.
Van Rossum F., Triest L. (2012) Stepping-stone populations in linear landscape elements increase pollen dispersal between urban forest fragments. Plant Ecology and Evolution, 145, 332-340.
Vanden Broeck A., Gruwez R., Cox K., Adriaenssens S., Michalczyk I.M., Verheyen K. (2011) Genetic structure and seed-mediated dispersal rates of an endangered shrub in a fragmented landscape: a case study for Juniperus communis in northwestern Europe. BMC Genetics, 12, 73.
Vekemans X., Lefèbvre C. (1997) On the evolution of heavy-metal tolerant populations in Armeria maritima: evidence from allozyme variation and reproductive barriers. Journal of Evolutionary Biology, 10, 175-191.
Vendramin G.G., Anzidei M., Madaghiele A., Bucci G. (1998) Distribution of genetic diversity in Pinus pinaster Ait. as revealed by chloroplast microsatellites. Theoretical and Applied Genetics, 97, 456-463.
Vergeer P., Sonderen E., Ouborg N.J. (2004) Introduction strategies put to the test: local adaptation versus heterosis. Conservation Biology, 18, 812-821.
Verheyen K., Adriaenssens S., Gruwez R., Michalczyk I.M., Ward L.K., Rosseel Y., Van den Broeck A., García D. (2009) Juniperus communis: victim of the combined action of climate warming and nitrogen deposition? Plant Biology, 11, 49-59.
Verheyen K., Schreurs K., Vanholen B., Hermy M. (2005) Intensive management fails to promote recruitment in the last large population of Juniperus communis (L.) in Flanders (Belgium). Biological Conservation, 124, 113-121.
Vilcinskas R., Jociene L., Rekasius T., Marozas V., Paulauskas A., Kupcinskiene E. (2016) Genetic diversity of Lithuanian populations of Juniperus communis L. in relation to abiotic and biotic factors. Dendrobiology, 76, 61-71.
Vranckx G., Jacquemyn H., Muys B., Honnay O. (2012) Meta-analysis of susceptibility of woody plants to loss of genetic diversity through habitat fragmentation. Conservation Biology, 26, 228-237.
Vranckx G., Mergeay J., Cox K., Muys B., Jacquemyn H., Honnay O. (2014) Tree density and population size affect pollen flow and mating patterns in small fragmented forest stands of pedunculate oak (Quercus robur L.). Forest Ecology and Management, 328, 254-261.
Ward L.K. (1982) The conservation of juniper: longevity and old age. Journal of Applied Ecology, 19, 917-928.
Ward L.K. (2007) Juniperus communis L. Plantlife International, Salisbury, UK. 46.
Weeks A.R., Sgro C.M., Young A.G., Frankham R., Mitchell N.L., Miller K.A., Byrne M., Coates D.J., Eldridge M.D.B., Sunnuck P., Breed M.F., James E.A., Hoffmann A.A. (2011) Assessing the benefits and risks of translocations in changing environments: a genetic perspective. Evolutionary Applications, 4, 709-725.
Weir B.S., Cockerham C.C. (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-1370.
Zavodna M., Abdelkrim J., Pellissier V., Machon N. (2015) A long-term genetic study reveals complex population dynamics of multiple-source plant reintroductions. Biological Conservation, 192, 1-9.
Grant Information:
LIFE Belgian Nature Integrated Project
Contributed Indexing:
Keywords: Juniperus communis; germination; inbreeding; microsatellites; plant translocation; population restoration
Entry Date(s):
Date Created: 20200929 Date Completed: 20210302 Latest Revision: 20210302
Update Code:
20240105
DOI:
10.1111/plb.13188
PMID:
32991026
Czasopismo naukowe
Many critically endangered plant species exist in small, genetically depauperate or inbred populations, making assisted gene flow interventions necessary for long-term population viability. However, before such interventions are implemented, conservation practitioners must consider the genetic and demographic status of extant populations, which are strongly affected by species' life-history traits. In northwestern Europe, Juniperus communis, a dioecious, wind-pollinated and bird-dispersed gymnosperm, has been declining for the past century and largely exists in small, isolated and senescent populations. To provide useful recommendations for a recovery plan involving translocation of plants, we investigated genetic diversity and structure of populations in Belgium using four microsatellite and five plastid single-nucleotide polymorphism (SNP) markers. We detected no clonality in the populations, suggesting predominantly sexual reproduction. Populations exhibited high genetic diversity (H e  = 0.367-0.563) and low to moderate genetic differentiation (F ST  ≤ 0.133), with no clear geographic structure. Highly positive inbreeding coefficients (F IS  = 0.221-0.507) were explained by null alleles, population substructuring and biparental inbreeding. No isolation by distance was observed among distant populations, but isolation at close geographic proximity was found. Patterns were consistent with high historical gene flow through pollen and seed dispersal at both short and long distances. We also tested four pre-germination treatments among populations to improve germination rates; however, germination rates remained low and only cold-stratification treatments induced germination in some populations. To bolster population regeneration, introductions of cuttings from several source populations are recommended, in combination with in situ management practices that improve seedling survival and with ex situ propagation.
(© 2020 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.)

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