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Tytuł pozycji:

Immunoaffinity-Based Liquid Chromatography Mass Spectrometric Assay to Accurately Quantify the Protein Concentration of HMGB1 in EDTA Plasma.

Tytuł:
Immunoaffinity-Based Liquid Chromatography Mass Spectrometric Assay to Accurately Quantify the Protein Concentration of HMGB1 in EDTA Plasma.
Autorzy:
Anselm V; Signatope GmbH, Reutlingen, Germany.
Steinhilber A; Signatope GmbH, Reutlingen, Germany.
Sommersdorf C; Signatope GmbH, Reutlingen, Germany.
Poetz O; Signatope GmbH, Reutlingen, Germany. .
Źródło:
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2261, pp. 277-289.
Typ publikacji:
Journal Article
Język:
English
Imprint Name(s):
Publication: Totowa, NJ : Humana Press
Original Publication: Clifton, N.J. : Humana Press,
MeSH Terms:
Analytic Sample Preparation Methods*
Blood Specimen Collection*
Chromatography, Affinity*
Proteomics*
Tandem Mass Spectrometry*
Edetic Acid/*pharmacology
HMGB1 Protein/*blood
Anticoagulants/pharmacology ; Humans ; Immunoprecipitation ; Proteolysis
References:
Aebersold R, Mann M (2016) Mass-spectrometric exploration of proteome structure and function. Nature 537(7620):347–355. https://doi.org/10.1038/nature19949. (PMID: 10.1038/nature1994927629641)
Gillette MA, Carr SA (2013) Quantitative analysis of peptides and proteins in biomedicine by targeted mass spectrometry. Nat Methods 10(1):28–34. https://doi.org/10.1038/nmeth.2309. (PMID: 10.1038/nmeth.2309232693743943160)
Geyer PE, Kulak NA, Pichler G, Holdt LM, Teupser D, Mann M (2016) Plasma proteome profiling to assess human health and disease. Cell Syst 2(3):185–195. https://doi.org/10.1016/j.cels.2016.02.015. (PMID: 10.1016/j.cels.2016.02.01527135364)
Rissin DM, Kan CW, Campbell TG, Howes SC, Fournier DR, Song L, Piech T, Patel PP, Chang L, Rivnak AJ, Ferrell EP, Randall JD, Provuncher GK, Walt DR, Duffy DC (2010) Single-molecule enzyme-linked immunosorbent assay detects serum proteins at subfemtomolar concentrations. Nat Biotechnol 28(6):595–599. https://doi.org/10.1038/nbt.1641. (PMID: 10.1038/nbt.1641204955502919230)
Baker M (2015) Reproducibility crisis: blame it on the antibodies. Nature 521(7552):274–276. https://doi.org/10.1038/521274a. (PMID: 10.1038/521274a25993940)
Uhlen M, Bandrowski A, Carr S, Edwards A, Ellenberg J, Lundberg E, Rimm DL, Rodriguez H, Hiltke T, Snyder M, Yamamoto T (2016) A proposal for validation of antibodies. Nat Methods 13(10):823–827. https://doi.org/10.1038/nmeth.3995. (PMID: 10.1038/nmeth.399527595404)
Anderson NL, Anderson NG, Haines LR, Hardie DB, Olafson RW, Pearson TW (2004) Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA). J Proteome Res 3(2):235–244. (PMID: 10.1021/pr034086h)
Gautier JC, Zhou X, Yang Y, Gury T, Qu Z, Palazzi X, Leonard JF, Slaoui M, Veeranagouda Y, Guizon I, Boitier E, Filali-Ansary A, van den Berg BHJ, Poetz O, Joos T, Zhang T, Wang J, Detilleux P, Li B (2016) Evaluation of novel biomarkers of nephrotoxicity in Cynomolgus monkeys treated with gentamicin. Toxicol Appl Pharmacol 303:1–10. https://doi.org/10.1016/j.taap.2016.04.012. (PMID: 10.1016/j.taap.2016.04.01227105553)
Neubert H, Shuford CM, Olah TV, Garofolo F, Schultz GA, Jones BR, Amaravadi L, Laterza OF, Xu K, Ackermann BL (2020) Protein biomarker quantification by Immunoaffinity liquid chromatography-tandem mass spectrometry: current state and future vision. Clin Chem 66(2):282–301. https://doi.org/10.1093/clinchem/hvz022. (PMID: 10.1093/clinchem/hvz02232040572)
Anderson NL, Anderson NG, Pearson TW, Borchers CH, Paulovich AG, Patterson SD, Gillette M, Aebersold R, Carr SA (2009) A human proteome detection and quantitation project. Mol Cell Proteomics 8(5):883–886. https://doi.org/10.1074/mcp.R800015-MCP200. (PMID: 10.1074/mcp.R800015-MCP200191313272689772)
Klune JR, Dhupar R, Cardinal J, Billiar TR, Tsung A (2008) HMGB1: endogenous danger signaling. Mol Med 14(7-8):476–484. https://doi.org/10.2119/2008-00034.Klune. (PMID: 10.2119/2008-00034.Klune184314612323334)
Huebener P, Pradere JP, Hernandez C, Gwak GY, Caviglia JM, Mu X, Loike JD, Schwabe RF (2015) The HMGB1/RAGE axis triggers neutrophil-mediated injury amplification following necrosis. J Clin Invest 125(2):539–550. https://doi.org/10.1172/JCI76887. (PMID: 10.1172/JCI7688725562324)
Andersson U, Tracey KJ (2011) HMGB1 is a therapeutic target for sterile inflammation and infection. Annu Rev Immunol 29:139–162. https://doi.org/10.1146/annurev-immunol-030409-101323. (PMID: 10.1146/annurev-immunol-030409-101323212191814536551)
Sims GP, Rowe DC, Rietdijk ST, Herbst R, Coyle AJ (2010) HMGB1 and RAGE in inflammation and cancer. Annu Rev Immunol 28:367–388. https://doi.org/10.1146/annurev.immunol.021908.132603. (PMID: 10.1146/annurev.immunol.021908.13260320192808)
Church RJ, Watkins PB (2017) The transformation in biomarker detection and management of drug-induced liver injury. Liver Int 37(11):1582–1590. https://doi.org/10.1111/liv.13441. (PMID: 10.1111/liv.13441283869975632128)
Abdulahad DA, Westra J, Bijzet J, Limburg PC, Kallenberg CG, Bijl M (2011) High mobility group box 1 (HMGB1) and anti-HMGB1 antibodies and their relation to disease characteristics in systemic lupus erythematosus. Arthritis Res Ther 13(3):R71. https://doi.org/10.1186/ar3332. (PMID: 10.1186/ar3332215489243218880)
Urbonaviciute V, Furnrohr BG, Weber C, Haslbeck M, Wilhelm S, Herrmann M, Voll RE (2007) Factors masking HMGB1 in human serum and plasma. J Leukoc Biol 81(1):67–74. https://doi.org/10.1189/jlb.0306196. (PMID: 10.1189/jlb.030619617060363)
Xu D, Young J, Song D, Esko JD (2011) Heparan sulfate is essential for high mobility group protein 1 (HMGB1) signaling by the receptor for advanced glycation end products (RAGE). J Biol Chem 286(48):41736–41744. https://doi.org/10.1074/jbc.M111.299685. (PMID: 10.1074/jbc.M111.299685219903623308882)
Contributed Indexing:
Keywords: Antibody; HMGB1; Immunoaffinity liquid chromatography mass spectrometric assay; Immunoprecipitation; Parallel reaction monitoring; Peptide quantification
Substance Nomenclature:
0 (Anticoagulants)
0 (HMGB1 Protein)
0 (HMGB1 protein, human)
9G34HU7RV0 (Edetic Acid)
Entry Date(s):
Date Created: 20210109 Date Completed: 20210331 Latest Revision: 20210331
Update Code:
20240105
DOI:
10.1007/978-1-0716-1186-9_17
PMID:
33420996
Czasopismo naukowe
Targeted protein quantification can be challenging in body fluids such as plasma with regard to sensitivity and selectivity. In this chapter, we present a protocol for the quantification of high mobility group box 1 protein (HMGB1) in plasma using an immunoaffinity liquid chromatography mass spectrometric assay (IA-LC-MSMS). The protocol provides detailed assay instructions involving sample proteolysis, peptide-targeted immunoprecipitation, and LC-MSMS-based read out.

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