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Tytuł:
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Transcriptomic data recover a new superfamily-level phylogeny of Cucujiformia (Coleoptera, Polyphaga).
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Autorzy:
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Yuan ML; State Key Laboratory of Grassland Agro-Ecosystems, Lanzhou University, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agricultural Science and Technology, Lanzhou University, Lanzhou 730020, People's Republic of China. Electronic address: .
Chen WT; State Key Laboratory of Grassland Agro-Ecosystems, Lanzhou University, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agricultural Science and Technology, Lanzhou University, Lanzhou 730020, People's Republic of China.
Zhang QL; Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, People's Republic of China.
Li M; State Key Laboratory of Grassland Agro-Ecosystems, Lanzhou University, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agricultural Science and Technology, Lanzhou University, Lanzhou 730020, People's Republic of China.
Zhang L; State Key Laboratory of Grassland Agro-Ecosystems, Lanzhou University, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agricultural Science and Technology, Lanzhou University, Lanzhou 730020, People's Republic of China.
Tang PA; Collaborative Innovation Center for Modern Grain Circulation and Safety, College of Food Science and Engineering, Nanjing University of Finance and Economics, Nanjing 210023, People's Republic of China. Electronic address: .
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Źródło:
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Molecular phylogenetics and evolution [Mol Phylogenet Evol] 2023 Feb; Vol. 179, pp. 107679. Date of Electronic Publication: 2022 Dec 17.
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Typ publikacji:
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Journal Article; Research Support, Non-U.S. Gov't
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Język:
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English
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Imprint Name(s):
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Publication: San Diego, CA ; Orlando, FL : Academic Press
Original Publication: San Diego : Academic Press, c1992-
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MeSH Terms:
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Transcriptome*
Coleoptera*/genetics
Animals ; Phylogeny ; Bayes Theorem ; Amino Acids
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Contributed Indexing:
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Keywords: Beetles; Molecular dating; Phylogenomics; Phylogeny; Transcriptomes
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Substance Nomenclature:
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0 (Amino Acids)
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Entry Date(s):
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Date Created: 20221220 Date Completed: 20230103 Latest Revision: 20230209
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Update Code:
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20240104
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DOI:
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10.1016/j.ympev.2022.107679
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PMID:
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36539017
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Cucujiformia, the largest taxon in the order Coleoptera, exhibits extraordinary morphological, ecological, and behavioral diversity. This infraorder is currently divided into seven superfamilies, but considerably incongruent relationships among superfamilies have been reported by recent phylogenomic studies. Here, we combined the 21 newly sequenced transcriptomes representing six superfamilies with nine previously published cucujiform genomes/transcriptomes to elucidate the phylogeny and evolution of Cucujiformia. The monophyly of each of five superfamilies were consistently supported by all phylogenetic analyses based on the twelve datasets (matrix occupancy, amino acid and nucleotide data) and the two analytical methods (maximum likelihood method and Bayesian inference). Both the amino acid datasets and the RY recoded nucleotide datasets recovered the monophyly of Cucujoidea. Topology test results statistically supported the following robust superfamily-level phylogeny in Cucujiformia: (Coccinelloidea, (Cleroidea, (Tenebrionoidea, (Cucujoidea, (Chrysomeloidea, Curculionoidea))))). Our divergence time analyses recovered a Permian origin of Cucujiformia and a Jurassic-Cretaceous origin of most superfamilies. The diversification of phytophagous beetles that occurred in the Cretaceous can be attributed to its co-evolution with angiosperms, supporting the hypothesis of a Cretaceous Terrestrial Revolution.
Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
(Copyright © 2022 Elsevier Inc. All rights reserved.)
