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Tytuł pozycji:

Identification, Classification and Characterization Analysis of FBXL Gene in Cotton.

Tytuł:
Identification, Classification and Characterization Analysis of FBXL Gene in Cotton.
Autorzy:
Pan J; College of Agronomy, Tarim University, Alar 843300, China.; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Ahmad MZ; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Zhu S; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Chen W; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Yao J; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Li Y; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Fang S; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Li T; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Yeboah A; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
He L; College of Agronomy, Tarim University, Alar 843300, China.
Zhang Y; College of Agronomy, Tarim University, Alar 843300, China.; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China.
Źródło:
Genes [Genes (Basel)] 2022 Nov 23; Vol. 13 (12). Date of Electronic Publication: 2022 Nov 23.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
Język:
English
Imprint Name(s):
Original Publication: Basel : MDPI
MeSH Terms:
Multigene Family*
F-Box Proteins*/genetics
Gene Duplication ; Phylogeny ; Genes, Plant ; Stress, Physiological/genetics
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Contributed Indexing:
Keywords: FBXL family; cotton; gene expression; phylogenetic
Substance Nomenclature:
0 (F-Box Proteins)
Entry Date(s):
Date Created: 20221223 Date Completed: 20221226 Latest Revision: 20230110
Update Code:
20240104
PubMed Central ID:
PMC9777894
DOI:
10.3390/genes13122194
PMID:
36553463
Czasopismo naukowe
F-box/LR ( FBXL ), Leucine-rich repeats in F-box proteins, belongs to the Skp1-Cullin1-F-box protein (SCF) E3 ligase family. FBXL genes play important roles in plant growth, such as plant hormones, responses to environmental stress, and floral organ development. Here, a total of 518 FBXL genes were identified and analyzed in six plant species. Phylogenetic analysis showed that AtFBXL s, VvFBXL s, and GrFBXL s were clustered into three subfamilies (Ⅰ-Ⅲ). Based on the composition of the F-box domain and carboxyl-terminal amino acid sequence, FBXL proteins were classified into three types (Type-A/-B/-C). Whole-genome duplication (WGD) along with tandem duplications and segmental contributed to the expansion of this gene family. The result indicates that four cotton species are also divided into three subfamilies. FBXL s in cotton were classified into three clades by phylogenetic and structural analyses. Furthermore, expression analyses indicated that the expression patterns of GhFBXL s in different cotton tissues were different. The highly expressed of GH_A07G2363 in 5-8 mm anthers, indicates that this gene might play a role in the reproductive process, providing candidate genes for future studies on cotton fertility materials. This study provides an original functional opinion and a useful interpretation of the FBXL protein family in cotton.

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