Autor: "Šafář, Jan" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: In-Depth Sequence Analysis of Bread Wheat VRN1 Genes.
Autorzy:: Strejčková B; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.; Department of Cell Biology and Genetics, Faculty of Science, Palacký University, 78371 Olomouc, Czech Republic.
Milec Z; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.
Holušová K; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.
Cápal P; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.
Vojtková T; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.
Čegan R; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.; Department of Plant Developmental Genetics, Institute of Biophysics of the Czech Academy of Sciences, 61200 Brno, Czech Republic.
Šafář J; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany of the Czech Academy of Sciences, 77900 Olomouc, Czech Republic.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2021 Nov 13; Vol. 22 (22). Date of Electronic Publication: 2021 Nov 13.
Typ publikacji:: Journal Article
MeSH Terms:: Alleles*
Gene Dosage*
Genetic Variation*
Polyploidy*
Repressor Proteins/*genetics
Triticum/*genetics
Alternative Splicing ; Bread ; Mutagenesis, Insertional ; Sequence Analysis, DNA

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Skocz do pozycji: 2.

Tytuł:: Fundamentally different repetitive element composition of sex chromosomes in Rumex acetosa.
Autorzy:: Jesionek W; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.; Department of Experimental Biology, Faculty of Science, Masaryk University, Kamenice, Brno, Czech Republic.
Bodláková M; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.
Kubát Z; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.
Čegan R; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.
Vyskot B; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.
Vrána J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů, Olomouc-Holice, Czech Republic.
Šafář J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů, Olomouc-Holice, Czech Republic.
Puterova J; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.; Brno University of Technology, Faculty of Information Technology, Centre of Excellence IT4Innovations, Bozetechova, Brno, Czech Republic.
Hobza R; Department of Plant Developmental Genetics, The Czech Academy of Sciences, Institute of Biophysics, Královopolská, Brno, Czech Republic.; Pokaż więcej
Źródło:: Annals of botany [Ann Bot] 2021 Jan 01; Vol. 127 (1), pp. 33-47.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Rumex*/genetics
Chromosomes, Plant ; Evolution, Molecular ; In Situ Hybridization, Fluorescence ; Retroelements ; Sex Chromosomes

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Skocz do pozycji: 3.

Tytuł:: Identification of polycomb repressive complex 1 and 2 core components in hexaploid bread wheat.
Autorzy:: Strejčková B; Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.
Čegan R; Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.; Department of Plant Developmental Genetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, 61200, Brno, Czech Republic.
Pecinka A; Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.
Milec Z; Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic.
Šafář J; Institute of Experimental Botany, Czech Academy of Sciences, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, 77900, Olomouc, Czech Republic. .; Pokaż więcej
Źródło:: BMC plant biology [BMC Plant Biol] 2020 Oct 14; Vol. 20 (Suppl 1), pp. 175. Date of Electronic Publication: 2020 Oct 14.
Typ publikacji:: Journal Article
MeSH Terms:: Polycomb Repressive Complex 1/*genetics
Polycomb Repressive Complex 2/*genetics
Triticum/*genetics
Chromosome Mapping ; Chromosomes, Plant ; Computer Simulation ; Evolution, Molecular ; Gene Expression Profiling ; Phylogeny ; RNA, Plant ; RNA-Seq

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Skocz do pozycji: 4.

Tytuł:: Correction: Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.
Autorzy:: Ivaničová Z
Valárik M
Pánková K
Trávníčková M
Doležel J
Šafář J
Milec Z; Pokaż więcej
Źródło:: PloS one [PLoS One] 2018 Feb 12; Vol. 13 (2), pp. e0192989. Date of Electronic Publication: 2018 Feb 12 (Print Publication: 2018).
Typ publikacji:: Journal Article; Published Erratum

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Skocz do pozycji: 5.

Tytuł:: Features of the organization of bread wheat chromosome 5BS based on physical mapping.
Autorzy:: Salina EA; Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia. .
Nesterov MA; Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia.
Frenkel Z; University of Haifa, Haifa, Israel.
Kiseleva AA; Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia.
Timonova EM; Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia.
Magni F; Istituto di Genomica Applicata, Udine, Italy.
Vrána J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Šafář J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Šimková H; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Doležel J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Olomouc, Czech Republic.
Korol A; University of Haifa, Haifa, Israel.
Sergeeva EM; Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, Russia.; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2018 Feb 09; Vol. 19 (Suppl 3), pp. 80. Date of Electronic Publication: 2018 Feb 09.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Bread*
Physical Chromosome Mapping*
Chromosomes, Plant/*genetics
Triticum/*genetics
Chromosomes, Artificial, Bacterial/genetics ; Polymerase Chain Reaction

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Skocz do pozycji: 6.

Tytuł:: Heritable heading time variation in wheat lines with the same number of Ppd-B1 gene copies.
Autorzy:: Ivaničová Z; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, CZ Olomouc, Czech Republic.
Valárik M; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, CZ Olomouc, Czech Republic.
Pánková K; Crop Research Institute, Drnovská 507, Prague, Czech Republic.
Trávníčková M; Crop Research Institute, Drnovská 507, Prague, Czech Republic.; Czech University of Life Sciences Prague, Kamýcká 129, Prague 6, Czech Republic.
Doležel J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, CZ Olomouc, Czech Republic.
Šafář J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, CZ Olomouc, Czech Republic.
Milec Z; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 31, CZ Olomouc, Czech Republic.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2017 Aug 28; Vol. 12 (8), pp. e0183745. Date of Electronic Publication: 2017 Aug 28 (Print Publication: 2017).
Typ publikacji:: Journal Article
MeSH Terms:: Genes, Plant*
Genetic Variation*
Triticum/*genetics
DNA Copy Number Variations ; DNA Methylation ; Photoperiod ; Promoter Regions, Genetic ; Quantitative Trait Loci ; Triticum/physiology

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Skocz do pozycji: 7.

Tytuł:: A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.
Autorzy:: Kobayashi F; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Wu J; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Kanamori H; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Tanaka T; Bioinformatics Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Katagiri S; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Karasawa W; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Kaneko S; Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. kaneko_.
Watanabe S; Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. .
Sakaguchi T; Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. .
Hanawa Y; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Fujisawa H; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Kurita K; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Abe C; Cereal Science Research Center of Tsukuba, Nisshin Flour Milling Inc., Tsukuba, 300-2611, Japan. .
Iehisa JC; Laboratory of Plant Genetics, Graduate School of Agricultural Science, Kobe University, Kobe, 657-8501, Japan. masaru_.
Ohno R; Core Research Division, Organization of Advanced Science and Technology, Kobe University, Kobe, 657-8501, Japan. .
Šafář J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, CZ-78371, Olomouc, Czech Republic. .
Šimková H; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, CZ-78371, Olomouc, Czech Republic. .
Mukai Y; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Hamada M; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Saito M; Wheat Breeding Group, NARO Tohoku Agricultural Research Center, Morioka, 020-0198, Japan. .
Ishikawa G; Wheat Breeding Group, NARO Tohoku Agricultural Research Center, Morioka, 020-0198, Japan. .
Katayose Y; Advanced Genomics Laboratory, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Endo TR; Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. .
Takumi S; Laboratory of Plant Genetics, Graduate School of Agricultural Science, Kobe University, Kobe, 657-8501, Japan. .
Nakamura T; Wheat Breeding Group, NARO Tohoku Agricultural Research Center, Morioka, 020-0198, Japan. .
Sato K; Institute of Plant Science and Resources, Okayama University, Kurashiki, 710-0046, Japan. .
Ogihara Y; Kihara Institute for Biological Research, Yokohama City University, Yokohama, 244-0813, Japan. .
Hayakawa K; Cereal Science Research Center of Tsukuba, Nisshin Flour Milling Inc., Tsukuba, 300-2611, Japan. .
Doležel J; Institute of Experimental Botany, Centre of the Region Haná for Biotechnological and Agricultural Research, CZ-78371, Olomouc, Czech Republic. .
Nasuda S; Laboratory of Plant Genetics, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan. .
Matsumoto T; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .
Handa H; Plant Genome Research Unit, National Institute of Agrobiological Sciences, Tsukuba, 305-8602, Japan. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2015 Aug 12; Vol. 16, pp. 595. Date of Electronic Publication: 2015 Aug 12.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosomes, Artificial, Bacterial/*genetics
Physical Chromosome Mapping/*methods
Triticum/*genetics
Chromosomes, Plant ; Evolution, Molecular ; Gene Order ; Gene Rearrangement ; Genetic Markers ; Nucleolus Organizer Region

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Skocz do pozycji: 8.

Tytuł:: The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements.
Autorzy:: Akpinar BA; Sabanci University Nanotechnology Research and Application Centre (SUNUM), Sabanci University, Universite Cad. Orta Mah. No: 27, Tuzla, 34956, Istanbul, Turkey. .
Magni F; Instituto di Genomica Applicata, Via J.Linussio 51, Udine, 33100, Italy. .
Yuce M; Sabanci University Nanotechnology Research and Application Centre (SUNUM), Sabanci University, Universite Cad. Orta Mah. No: 27, Tuzla, 34956, Istanbul, Turkey. .
Lucas SJ; Sabanci University Nanotechnology Research and Application Centre (SUNUM), Sabanci University, Universite Cad. Orta Mah. No: 27, Tuzla, 34956, Istanbul, Turkey. .
Šimková H; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, CZ-78371, Olomouc, Czech Republic. .
Šafář J; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, CZ-78371, Olomouc, Czech Republic. .
Vautrin S; Centre Nationales Ressources Génomiques Végétales, INRA UPR 1258, 24 Chemin de Borde Rouge - Auzeville 31326, Castanet-Tolosan, France. .
Bergès H; Centre Nationales Ressources Génomiques Végétales, INRA UPR 1258, 24 Chemin de Borde Rouge - Auzeville 31326, Castanet-Tolosan, France. .
Cattonaro F; Instituto di Genomica Applicata, Via J.Linussio 51, Udine, 33100, Italy. .
Doležel J; Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, CZ-78371, Olomouc, Czech Republic. .
Budak H; Sabanci University Nanotechnology Research and Application Centre (SUNUM), Sabanci University, Universite Cad. Orta Mah. No: 27, Tuzla, 34956, Istanbul, Turkey. .; Molecular Biology, Genetics and Bioengineering Program, Sabanci University, 34956, Istanbul, Turkey. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2015 Jun 13; Vol. 16, pp. 453. Date of Electronic Publication: 2015 Jun 13.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Duplication*
Gene Rearrangement*
Contig Mapping/*methods
Triticum/*genetics
Chromosomes, Plant ; DNA, Plant/analysis ; Evolution, Molecular ; Physical Chromosome Mapping/methods

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Skocz do pozycji: 9.

Tytuł:: Genomic diversity in two related plant species with and without sex chromosomes--Silene latifolia and S. vulgaris.
Autorzy:: Cegan R; Department of Plant Developmental Genetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, v.v.i., Brno, Czech Republic.
Vyskot B
Kejnovsky E
Kubat Z
Blavet H
Šafář J
Doležel J
Blavet N
Hobza R; Pokaż więcej
Źródło:: PloS one [PLoS One] 2012; Vol. 7 (2), pp. e31898. Date of Electronic Publication: 2012 Feb 29.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Genome Size*
Silene/*classification
Silene/*genetics
Chromosomes, Plant ; Computational Biology/methods ; DNA, Satellite/genetics ; Evolution, Molecular ; Genes, Plant ; Genetic Variation ; Genome, Plant ; Genomics ; In Situ Hybridization, Fluorescence ; Magnoliopsida/genetics ; Microsatellite Repeats/genetics ; Models, Genetic ; Nucleic Acid Hybridization ; Plant Proteins/genetics ; Polyploidy ; Repetitive Sequences, Nucleic Acid/genetics

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