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Wyszukujesz frazę ""Ackerman, E. J."" wg kryterium: Autor


Tytuł :
Monte Carlo simulation of base and nucleotide excision repair of clustered DNA damage sites. I. Model properties and predicted trends.
Autorzy :
Semenenko VA; Purdue University, School of Health Sciences, West Lafayette, Indiana 47907-2051, USA.
Stewart RD
Ackerman EJ
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Źródło :
Radiation research [Radiat Res] 2005 Aug; Vol. 164 (2), pp. 180-93.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
DNA Damage*
DNA Repair*
Monte Carlo Method*
DNA/biosynthesis ; Linear Energy Transfer
Czasopismo naukowe
Tytuł :
Single-molecule conformational dynamics of fluctuating noncovalent DNA-protein interactions in DNA damage recognition.
Autorzy :
Lu HP; Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, P.O. Box 999, Richland, WA 99352, USA. />Iakoucheva LM
Ackerman EJ
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Źródło :
Journal of the American Chemical Society [J Am Chem Soc] 2001 Sep 19; Vol. 123 (37), pp. 9184-5.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
DNA Damage*
DNA/*chemistry
DNA-Binding Proteins/*chemistry
Animals ; Binding Sites ; Fluorescein ; Fluorometry ; Nucleic Acid Conformation ; Protein Conformation ; Xenopus ; Xeroderma Pigmentosum Group A Protein
Czasopismo naukowe
Tytuł :
DNA repair of a single UV photoproduct in a designed nucleosome.
Autorzy :
Kosmoski JV; Biochemistry and Biophysics, School of Molecular Biosciences, Washington State University, Pullman, WA 99164-4660, USA.
Ackerman EJ
Smerdon MJ
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2001 Aug 28; Vol. 98 (18), pp. 10113-8. Date of Electronic Publication: 2001 Aug 21.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.
MeSH Terms :
DNA Repair*
Nucleosomes/*metabolism
Animals ; Base Sequence ; DNA Damage ; DNA Ligases/metabolism ; Female ; In Vitro Techniques ; Nucleosomes/radiation effects ; Oligodeoxyribonucleotides/genetics ; Oligodeoxyribonucleotides/metabolism ; Oligodeoxyribonucleotides/radiation effects ; Photochemistry ; Ultraviolet Rays ; Xenopus
Czasopismo naukowe
Tytuł :
Photoaffinity labeling of mouse fibroblast enzymes by a base excision repair intermediate. Evidence for the role of poly(ADP-ribose) polymerase-1 in DNA repair.
Autorzy :
Lavrik OI; Laboratory of Structural Biology, NIEHS, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.
Prasad R
Sobol RW
Horton JK
Ackerman EJ
Wilson SH
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Źródło :
The Journal of biological chemistry [J Biol Chem] 2001 Jul 06; Vol. 276 (27), pp. 25541-8. Date of Electronic Publication: 2001 May 04.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.
MeSH Terms :
DNA Repair*
Fibroblasts/*enzymology
Isoenzymes/*metabolism
Photoaffinity Labels/*metabolism
Poly(ADP-ribose) Polymerases/*metabolism
Animals ; Base Sequence ; Binding, Competitive ; Cell Line ; Deoxycytosine Nucleotides/metabolism ; Humans ; In Situ Nick-End Labeling ; Methyl Methanesulfonate/pharmacology ; Mice ; Molecular Sequence Data ; Nucleic Acid Conformation ; Spectrophotometry, Ultraviolet
Czasopismo naukowe
Tytuł :
Aberrant mobility phenomena of the DNA repair protein XPA.
Autorzy :
Iakoucheva LM; Pacific Northwest National Laboratory (PNNL), Molecular Biosciences Department, Richland, Washington 99352, USA.
Kimzey AL
Masselon CD
Smith RD
Dunker AK
Ackerman EJ
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Źródło :
Protein science : a publication of the Protein Society [Protein Sci] 2001 Jul; Vol. 10 (7), pp. 1353-62.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Electrophoresis, Polyacrylamide Gel*
DNA-Binding Proteins/*chemistry
RNA-Binding Proteins/*chemistry
Amino Acid Sequence ; Animals ; Chromatography, Gel ; Cisplatin/metabolism ; Cisplatin/pharmacology ; Cross-Linking Reagents ; DNA-Binding Proteins/metabolism ; Molecular Sequence Data ; Molecular Weight ; Oligonucleotides/metabolism ; Peptide Fragments/chemistry ; RNA-Binding Proteins/metabolism ; Spectrometry, Mass, Electrospray Ionization ; Sulfhydryl Compounds ; Xenopus ; Xeroderma Pigmentosum Group A Protein
Czasopismo naukowe
Tytuł :
Identification of intrinsic order and disorder in the DNA repair protein XPA.
Autorzy :
Iakoucheva LM; Pacific Northwest National Laboratory, Molecular Biosciences Department, Richland, WA 99352, USA.
Kimzey AL
Masselon CD
Bruce JE
Garner EC
Brown CJ
Dunker AK
Smith RD
Ackerman EJ
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Źródło :
Protein science : a publication of the Protein Society [Protein Sci] 2001 Mar; Vol. 10 (3), pp. 560-71.
Typ publikacji :
Journal Article
MeSH Terms :
DNA Repair/*physiology
DNA-Binding Proteins/*chemistry
DNA-Binding Proteins/*physiology
Amino Acid Motifs/genetics ; Amino Acid Motifs/physiology ; Amino Acid Sequence ; Animals ; Electrophoresis, Polyacrylamide Gel ; Hydrolysis ; Neural Networks, Computer ; Protein Structure, Secondary ; Spectrometry, Mass, Electrospray Ionization ; Spectroscopy, Fourier Transform Infrared ; Trypsin ; Xenopus laevis ; Xeroderma Pigmentosum Group A Protein
Czasopismo naukowe
Tytuł :
An integrated confocal and magnetic resonance microscope for cellular research.
Autorzy :
Wind RA; Pacific Northwest National Laboratory, Richland, Washington 99352, USA. />Minard KR
Holtom GR
Majors PD
Ackerman EJ
Colson SD
Cory DG
Daly DS
Ellis PD
Metting NF
Parkinson CI
Price JM
Tang XW
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Źródło :
Journal of magnetic resonance (San Diego, Calif. : 1997) [J Magn Reson] 2000 Dec; Vol. 147 (2), pp. 371-7.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Magnetic Resonance Imaging*
Microscopy, Confocal*
Oocytes/*ultrastructure
Animals ; Equipment Design ; Microscopy, Fluorescence ; Xenopus
Czasopismo naukowe
Tytuł :
Nucleotide excision repair in oocyte nuclear extracts from Xenopus laevis.
Autorzy :
Ackerman EJ; Pacific Northwest National Laboratory, Richland, Washington, 99352-0999, USA.
Iakoucheva LM
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Źródło :
Methods (San Diego, Calif.) [Methods] 2000 Oct; Vol. 22 (2), pp. 188-93.
Typ publikacji :
Journal Article
MeSH Terms :
DNA Repair*
Biochemistry/*methods
Cell Nucleus/*metabolism
Oocytes/*metabolism
Xenopus/*embryology
Animals ; Electrophoresis, Agar Gel ; Recombinant Proteins/metabolism ; Time Factors ; Ultraviolet Rays
Czasopismo naukowe
Tytuł :
The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells.
Autorzy :
Brooks PJ; Laboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, Bethesda, Maryland 20892, USA. />Wise DS
Berry DA
Kosmoski JV
Smerdon MJ
Somers RL
Mackie H
Spoonde AY
Ackerman EJ
Coleman K
Tarone RE
Robbins JH
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Źródło :
The Journal of biological chemistry [J Biol Chem] 2000 Jul 21; Vol. 275 (29), pp. 22355-62.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.
MeSH Terms :
DNA Repair*/*genetics
Gene Expression Regulation*
Adult ; Animals ; CHO Cells ; Cricetinae ; DNA Damage ; Deoxyadenosines ; Humans ; Oxidative Stress ; Rats ; Xeroderma Pigmentosum
Czasopismo naukowe
Tytuł :
Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene.
Autorzy :
Conconi A; Department of Biochemistry and Biophysics, Washington State University, Pullman, WA 99164-4660, USA.
Liu X
Koriazova L
Ackerman EJ
Smerdon MJ
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Źródło :
The EMBO journal [EMBO J] 1999 Mar 01; Vol. 18 (5), pp. 1387-96.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, U.S. Gov't, P.H.S.
MeSH Terms :
DNA Repair/*genetics
DNA, Ribosomal/*genetics
DNA-Binding Proteins/*genetics
RNA, Ribosomal, 5S/*genetics
Transcription Factors/*genetics
Animals ; Binding Sites ; DNA Damage/genetics ; Kinetics ; Nuclear Proteins/genetics ; Oocytes/metabolism ; Promoter Regions, Genetic/genetics ; Regulatory Sequences, Nucleic Acid/genetics ; Transcription Factor TFIIIA ; Transcription, Genetic ; Xenopus
Czasopismo naukowe
Tytuł :
Extended X-ray absorption fine structure evidence for a single metal binding domain in Xenopus laevis nucleotide excision repair protein XPA.
Autorzy :
Buchko GW; Biosciences Department, Pacific Northwest National Laboratories, Richland, Washington, 99352, USA.
Iakoucheva LM
Kennedy MA
Ackerman EJ
Hess NJ
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Źródło :
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 1999 Jan 08; Vol. 254 (1), pp. 109-13.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
DNA-Binding Proteins/*chemistry
Metals/*chemistry
Amino Acid Sequence ; Animals ; Binding Sites ; DNA-Binding Proteins/metabolism ; Humans ; Metals/metabolism ; Molecular Sequence Data ; Protein Binding ; Sequence Alignment ; Spectrum Analysis ; X-Rays ; Xenopus laevis ; Xeroderma Pigmentosum Group A Protein
Czasopismo naukowe
Tytuł :
Nucleotide excision repair in nuclear extracts from Xenopus oocytes.
Autorzy :
Ackerman EJ; Pacific Northwest National Laboratory, Richland, WA, USA.
Koriazova LK
Saxena JK
Spoonde AY
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 1999; Vol. 113, pp. 347-55.
Typ publikacji :
Journal Article
MeSH Terms :
DNA Damage*
DNA Repair*
Cell Nucleus/*metabolism
DNA/*genetics
Oocytes/*metabolism
Pyrimidine Dimers/*metabolism
Animals ; Cell Fractionation/methods ; DNA/isolation & purification ; DNA/metabolism ; DNA Replication ; DNA, Viral/genetics ; Electrophoresis, Agar Gel/methods ; Endodeoxyribonucleases/metabolism ; Female ; Multienzyme Complexes/metabolism ; N-Glycosyl Hydrolases/metabolism ; Plasmids/genetics ; Plasmids/metabolism ; Plasmids/radiation effects ; Ultraviolet Rays ; Xenopus laevis
Czasopismo naukowe
Tytuł :
Arrested DNA replication in Xenopus and release by Escherichia coli mutagenesis proteins.
Autorzy :
Oda N; Office of Scientific Director, National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), National Institutes of Health, Bethesda, Maryland 20892, USA.
Levin JD
Spoonde AY
Frank EG
Levine AS
Woodgate R
Ackerman EJ
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Źródło :
Science (New York, N.Y.) [Science] 1996 Jun 14; Vol. 272 (5268), pp. 1644-6.
Typ publikacji :
Journal Article
MeSH Terms :
DNA Replication*
Escherichia coli Proteins*
Bacterial Proteins/*physiology
Escherichia coli/*genetics
Oocytes/*metabolism
Animals ; Bacteriophage M13/genetics ; Bacteriophage phi X 174/genetics ; DNA/biosynthesis ; DNA Damage ; DNA Repair ; DNA, Single-Stranded/biosynthesis ; DNA-Directed DNA Polymerase ; Ultraviolet Rays ; Xenopus
Czasopismo naukowe
Tytuł :
DNA polymerases alpha and beta are required for DNA repair in an efficient nuclear extract from Xenopus oocytes.
Autorzy :
Oda N; Office of Scientific Director, NIDDK, National Institutes of Health, Bethesda, Maryland 20892, USA.
Saxena JK
Jenkins TM
Prasad R
Wilson SH
Ackerman EJ
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Źródło :
The Journal of biological chemistry [J Biol Chem] 1996 Jun 07; Vol. 271 (23), pp. 13816-20.
Typ publikacji :
Comparative Study; Journal Article
MeSH Terms :
DNA Polymerase I/*metabolism
DNA Polymerase II/*metabolism
DNA Repair/*physiology
Animals ; Antibodies/pharmacology ; Aphidicolin/pharmacology ; Cell Nucleus/metabolism ; DNA Polymerase I/antagonists & inhibitors ; DNA Polymerase II/antagonists & inhibitors ; Enzyme Inhibitors/pharmacology ; Female ; Humans ; In Vitro Techniques ; Oocytes/metabolism ; Pyrimidine Dimers/metabolism ; Pyrimidine Dimers/radiation effects ; Ultraviolet Rays ; Xenopus
Czasopismo naukowe

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