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Wyszukujesz frazę ""Amino Acid Sequence"" wg kryterium: Temat


Starter badań:

Tytuł:
Linking protein structural and functional change to mutation using amino acid networks.
Autorzy:
Sotomayor-Vivas C; Department of Computational Genomics, National Institute of Genomic Medicine, Mexico City, Mexico.
Hernández-Lemus E; Department of Computational Genomics, National Institute of Genomic Medicine, Mexico City, Mexico.; Center for Complexity Sciences (C3), Universidad Nacional Autónoma de México, Mexico City, Mexico.
Dorantes-Gilardi R; Center for Complex Network Research and Department of Physics, Northeastern University, Boston, MA, United States of America.
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Źródło:
PloS one [PLoS One] 2022 Jan 21; Vol. 17 (1), pp. e0261829. Date of Electronic Publication: 2022 Jan 21 (Print Publication: 2022).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Amino Acid Sequence*
Amino Acids*/chemistry
Amino Acids*/genetics
Evolution, Molecular*
Models, Molecular*
Mutation*
Proteins*/chemistry
Proteins*/genetics
Protein Conformation
Czasopismo naukowe
Tytuł:
A novel sequence-based predictor for identifying and characterizing thermophilic proteins using estimated propensity scores of dipeptides.
Autorzy:
Charoenkwan P; Modern Management and Information Technology, College of Arts, Media and Technology, Chiang Mai University, Chiang Mai, 50200, Thailand.
Chotpatiwetchkul W; Applied Computational Chemistry Research Unit, Department of Chemistry, School of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok, 10520, Thailand.
Lee VS; Department of Chemistry, Centre of Theoretical and Computational Physics, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Nantasenamat C; Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, Bangkok, 10700, Thailand.
Shoombuatong W; Center of Data Mining and Biomedical Informatics, Faculty of Medical Technology, Mahidol University, Bangkok, 10700, Thailand. .
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Źródło:
Scientific reports [Sci Rep] 2021 Dec 10; Vol. 11 (1), pp. 23782. Date of Electronic Publication: 2021 Dec 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Amino Acid Sequence*
Computational Biology/*methods
Dipeptides/*chemistry
Heat-Shock Proteins/*chemistry
Algorithms ; Amino Acids ; Databases, Protein ; Dipeptides/metabolism ; Heat-Shock Proteins/metabolism ; Machine Learning ; Models, Molecular ; Propensity Score ; Protein Conformation ; Reproducibility of Results ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł:
Sequence, Structure, and Binding Site Analysis of Kirkiin in Comparison with Ricin and Other Type 2 RIPs.
Autorzy:
Maiello S; Department of Experimental, Diagnostic and Specialty Medicine-DIMES, Alma Mater Studiorum-University of Bologna, Via S. Giacomo 14, 40126 Bologna, Italy.
Iglesias R; Department of Biochemistry and Molecular Biology and Physiology, Faculty of Sciences, University of Valladolid, 47011 Valladolid, Spain.
Polito L; Department of Experimental, Diagnostic and Specialty Medicine-DIMES, Alma Mater Studiorum-University of Bologna, Via S. Giacomo 14, 40126 Bologna, Italy.
Citores L; Department of Biochemistry and Molecular Biology and Physiology, Faculty of Sciences, University of Valladolid, 47011 Valladolid, Spain.
Bortolotti M; Department of Experimental, Diagnostic and Specialty Medicine-DIMES, Alma Mater Studiorum-University of Bologna, Via S. Giacomo 14, 40126 Bologna, Italy.
Ferreras JM; Department of Biochemistry and Molecular Biology and Physiology, Faculty of Sciences, University of Valladolid, 47011 Valladolid, Spain.
Bolognesi A; Department of Experimental, Diagnostic and Specialty Medicine-DIMES, Alma Mater Studiorum-University of Bologna, Via S. Giacomo 14, 40126 Bologna, Italy.
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Źródło:
Toxins [Toxins (Basel)] 2021 Dec 03; Vol. 13 (12). Date of Electronic Publication: 2021 Dec 03.
Typ publikacji:
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Amino Acid Sequence*
Binding Sites*
Ribosome Inactivating Proteins, Type 2/*chemistry
Ribosome Inactivating Proteins, Type 2/*genetics
Catalytic Domain ; Molecular Docking Simulation ; Passifloraceae/chemistry ; Passifloraceae/genetics ; Plant Proteins/chemistry ; Protein Domains ; Ricin/chemistry ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł:
Conformational flexibility of the conserved hydrophobic pocket of HIV-1 gp41. Implications for the discovery of small-molecule fusion inhibitors.
Autorzy:
Cano-Muñoz M; Departamento de Química Física, Instituto de Biotecnología y Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain. Electronic address: .
Jurado S; Departamento de Química Física, Instituto de Biotecnología y Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain.
Morel B; Departamento de Química Física, Instituto de Biotecnología y Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain.
Conejero-Lara F; Departamento de Química Física, Instituto de Biotecnología y Unidad de Excelencia de Química Aplicada a Biomedicina y Medioambiente (UEQ), Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain. Electronic address: .
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Źródło:
International journal of biological macromolecules [Int J Biol Macromol] 2021 Dec 01; Vol. 192, pp. 90-99. Date of Electronic Publication: 2021 Oct 05.
Typ publikacji:
Journal Article
MeSH Terms:
Amino Acid Sequence*
Catalytic Domain*
Conserved Sequence*
Hydrophobic and Hydrophilic Interactions*
Models, Molecular*
Protein Conformation*
HIV Envelope Protein gp41/*chemistry
Binding Sites ; Drug Design ; HIV Envelope Protein gp41/antagonists & inhibitors ; HIV Fusion Inhibitors/chemistry ; HIV Fusion Inhibitors/pharmacology ; Humans ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Peptide Fragments/chemistry ; Protein Binding ; Spectrum Analysis ; Thermodynamics
Czasopismo naukowe
Tytuł:
Lung cancer prediction using multi-gene genetic programming by selecting automatic features from amino acid sequences.
Autorzy:
Sattar M; Biomedical Informatics Research Lab, Department of Computer and Information Sciences, Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan; MIS Division, Pakistan Institute of Nuclear Science and Technology, Islamabad, Pakistan.
Majid A; Biomedical Informatics Research Lab, Department of Computer and Information Sciences, Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan. Electronic address: .
Kausar N; Department of Computing and Technology, Iqra University, Islamabad, Pakistan.
Bilal M; Biomedical Informatics Research Lab, Department of Computer and Information Sciences, Pakistan Institute of Engineering and Applied Sciences, Islamabad, Pakistan.
Kashif M; MIS Division, Pakistan Institute of Nuclear Science and Technology, Islamabad, Pakistan.
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Źródło:
Computational biology and chemistry [Comput Biol Chem] 2022 Jun; Vol. 98, pp. 107638. Date of Electronic Publication: 2022 Feb 03.
Typ publikacji:
Journal Article
MeSH Terms:
Lung Neoplasms*/diagnosis
Lung Neoplasms*/genetics
Algorithms ; Amino Acid Sequence ; Humans ; ROC Curve
Czasopismo naukowe
Tytuł:
Prediction of structural alphabet protein blocks using data mining.
Autorzy:
Maljković MM; Faculty of Mathematics, University of Belgrade, Studentski Trg 16, 11000, Belgrade, Serbia. Electronic address: .
Mitić NS; Faculty of Mathematics, University of Belgrade, Studentski Trg 16, 11000, Belgrade, Serbia.
de Brevern AG; Université de Paris, INSERM UMR_S 1134, DSIMB, Université de la Réunion, INTS6, Rue Alexandre Cabanel, 75015, Paris, France.
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Źródło:
Biochimie [Biochimie] 2022 Jun; Vol. 197, pp. 74-85. Date of Electronic Publication: 2022 Feb 07.
Typ publikacji:
Journal Article
MeSH Terms:
Data Mining*
Proteins*/chemistry
Algorithms ; Amino Acid Sequence ; Amino Acids ; Databases, Protein ; Protein Conformation
Czasopismo naukowe
Tytuł:
Palaeoproteomics guidelines to identify proteinaceous binders in artworks following the study of a 15th-century painting by Sandro Botticelli's workshop.
Autorzy:
Di Gianvincenzo, F. (AUTHOR)
Peggie, D. (AUTHOR)
Mackie, M. (AUTHOR)
Granzotto, C. (AUTHOR)
Higgitt, C. (AUTHOR)
Cappellini, E. (AUTHOR)
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Źródło:
Scientific Reports. 8/2/2022, Vol. 12 Issue 1, p1-13. 13p.
Czasopismo naukowe
Tytuł:
Characterization of binding interactions of SARS-CoV-2 spike protein and DNA-peptide nanostructures.
Autorzy:
Kruse, Marlen (AUTHOR)
Altattan, Basma (AUTHOR)
Laux, Eva-Maria (AUTHOR)
Grasse, Nico (AUTHOR)
Heinig, Lars (AUTHOR)
Möser, Christin (AUTHOR)
Smith, David M. (AUTHOR)
Hölzel, Ralph (AUTHOR)
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Źródło:
Scientific Reports. 7/27/2022, Vol. 12 Issue 1, p1-12. 12p.
Czasopismo naukowe
Tytuł:
Structure-based prediction of BRAF mutation classes using machine-learning approaches.
Autorzy:
Krebs, Fanny S. (AUTHOR)
Britschgi, Christian (AUTHOR)
Pradervand, Sylvain (AUTHOR)
Achermann, Rita (AUTHOR)
Tsantoulis, Petros (AUTHOR)
Haefliger, Simon (AUTHOR)
Wicki, Andreas (AUTHOR)
Michielin, Olivier (AUTHOR)
Zoete, Vincent (AUTHOR)
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Źródło:
Scientific Reports. 7/22/2022, Vol. 12 Issue 1, p1-8. 8p.
Czasopismo naukowe
Tytuł:
Potential of the Liquid Fermentation of Fishery Waste by Paenibacillus elgii for Metalloprotease Production.
Autorzy:
Doan, Chien Thang (AUTHOR)
Tran, Thi Ngoc (AUTHOR)
Nguyen, Minh Trung (AUTHOR)
Nguyen, Huu Kien (AUTHOR)
Tran, Thi Kim Thi (AUTHOR)
Nguyen, Thi Hanh (AUTHOR)
Tran, Thi Phuong Hanh (AUTHOR)
Nguyen, Van Bon (AUTHOR)
Nguyen, Anh Dzung (AUTHOR)
Wang, San-Lang (AUTHOR)
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Źródło:
Polymers (20734360). Jul2022, Vol. 14 Issue 13, p2741-N.PAG. 14p.
Czasopismo naukowe
Tytuł:
Unsupervised Learning for Feature Representation Using Spatial Distribution of Amino Acids in Aldehyde Dehydrogenase (ALDH2) Protein Sequences.
Autorzy:
Khandelwal, Monika (AUTHOR)
Sheikh, Sabha (AUTHOR)
Rout, Ranjeet Kumar (AUTHOR)
Umer, Saiyed (AUTHOR)
Mallik, Saurav (AUTHOR)
Zhao, Zhongming (AUTHOR)
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Źródło:
Mathematics (2227-7390). Jul2022, Vol. 10 Issue 13, p2228-N.PAG. 20p.
Czasopismo naukowe

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