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Wyszukujesz frazę ""Amino Acid Sequence"" wg kryterium: Temat


Tytuł :
Predicting structural class for protein sequences of 40% identity based on features of primary and secondary structure using Random Forest algorithm.
Autorzy :
Apurva M; Dharmsinh Desai University, Department of Computer Engineering, Faculty of Technology, D D University, Nadiad, 387001, India. Electronic address: .
Mazumdar H; Research and Development Center, Faculty of Technology, Dharmsinh Desai University, Nadiad, 387001, India. Electronic address: .
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Źródło :
Computational biology and chemistry [Comput Biol Chem] 2020 Feb; Vol. 84, pp. 107164. Date of Electronic Publication: 2019 Nov 15.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier Country of Publication: England NLM ID: 101157394 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-928X (Electronic) Linking ISSN: 14769271 NLM ISO Abbreviation: Comput Biol Chem Subsets: MEDLINE
MeSH Terms :
Algorithms*
Amino Acid Sequence*
Protein Structure, Secondary*
Proteins/*chemistry
Datasets as Topic
Czasopismo naukowe
Tytuł :
Mass spectrometry of in-gel digests reveals differences in amino acid sequences of high-molecular-weight glutenin subunits in spelt and emmer compared to common wheat.
Autorzy :
Geisslitz S; Leibniz-Institute for Food Systems Biology at the Technical University of Munich, 85354, Freising, Germany.
America AHP; Wageningen Plant Research, Wageningen University & Research, 6708 PB, Wageningen, The Netherlands.
Scherf KA; Leibniz-Institute for Food Systems Biology at the Technical University of Munich, 85354, Freising, Germany. .; Department of Bioactive and Functional Food Chemistry, Institute of Applied Biosciences, Karlsruhe Institute of Technology (KIT), 76131, Karlsruhe, Germany. .
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Źródło :
Analytical and bioanalytical chemistry [Anal Bioanal Chem] 2020 Feb; Vol. 412 (6), pp. 1277-1289. Date of Electronic Publication: 2020 Jan 11.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 101134327 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1618-2650 (Electronic) Linking ISSN: 16182642 NLM ISO Abbreviation: Anal Bioanal Chem Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Electrophoresis, Polyacrylamide Gel/*methods
Glutens/*chemistry
Tandem Mass Spectrometry/*methods
Triticum/*chemistry
Databases, Protein ; Glutens/isolation & purification ; Molecular Weight ; Sequence Homology, Amino Acid ; Triticum/classification
Czasopismo naukowe
Tytuł :
Genetic polymorphism of histidine rich protein 2 in Plasmodium falciparum isolates from different infection sources in Yunnan Province, China.
Autorzy :
Dong Y; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China. .
Liu S; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China.; School of Basic Medical Sciences, Dali University, Dali, 667000, China.
Deng Y; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China.
Xu Y; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China.
Chen M; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China.
Liu Y; Yunnan Institute of Parasitic Diseases Control, Yunnan Provincial Key Laboratory, Yunnan Centre of Malaria Research, Academician Workstation of Professor Jin Ningyi, Pu'er, 665000, China.
Xue J; National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention, Shanghai, 200025, China.
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Źródło :
Malaria journal [Malar J] 2019 Dec 30; Vol. 18 (1), pp. 446. Date of Electronic Publication: 2019 Dec 30.
Typ publikacji :
Journal Article
Journal Info :
Publisher: BioMed Central Country of Publication: England NLM ID: 101139802 Publication Model: Electronic Cited Medium: Internet ISSN: 1475-2875 (Electronic) Linking ISSN: 14752875 NLM ISO Abbreviation: Malar. J. Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Polymorphism, Genetic*
Sequence Deletion*
Antigens, Protozoan/*genetics
Plasmodium falciparum/*genetics
Protozoan Proteins/*genetics
China ; Humans ; Malaria, Falciparum/diagnosis
Czasopismo naukowe
Tytuł :
Prediction of Protein-Ligand Interaction Based on the Positional Similarity Scores Derived from Amino Acid Sequences.
Autorzy :
Karasev D; Department of Bioinformatics, Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Sobolev B; Department of Bioinformatics, Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Lagunin A; Department of Bioinformatics, Institute of Biomedical Chemistry, 119121 Moscow, Russia.; Department of Bioinformatics, Russian National Research Medical University, 117997 Moscow, Russia.
Filimonov D; Department of Bioinformatics, Institute of Biomedical Chemistry, 119121 Moscow, Russia.
Poroikov V; Department of Bioinformatics, Institute of Biomedical Chemistry, 119121 Moscow, Russia.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2019 Dec 18; Vol. 21 (1). Date of Electronic Publication: 2019 Dec 18.
Typ publikacji :
Journal Article
Journal Info :
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Ligands*
Models, Molecular*
Proteins/*chemistry
Algorithms ; Area Under Curve ; Binding Sites ; Computational Biology ; Databases, Protein ; Humans ; Phylogeny ; Protein Binding ; Protein Conformation ; Proteins/metabolism ; ROC Curve
Czasopismo naukowe
Tytuł :
CombLabel: rational design of optimized sequence-specific combinatorial labeling schemes. Application to backbone assignment of membrane proteins with low stability.
Autorzy :
Myshkin MY; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997. .; Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701. .
Dubinnyi MA; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.; Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701.
Kulbatskii DS; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.; Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.
Lyukmanova EN; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.; Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701.; Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.
Kirpichnikov MP; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.; Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.
Shenkarev ZO; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997. .; Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701. .
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Źródło :
Journal of biomolecular NMR [J Biomol NMR] 2019 Nov; Vol. 73 (10-11), pp. 531-544. Date of Electronic Publication: 2019 Jul 08.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Springer Country of Publication: Netherlands NLM ID: 9110829 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1573-5001 (Electronic) Linking ISSN: 09252738 NLM ISO Abbreviation: J. Biomol. NMR Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Membrane Proteins/*chemistry
Nuclear Magnetic Resonance, Biomolecular/*methods
Humans ; NAV1.4 Voltage-Gated Sodium Channel/chemistry ; Proof of Concept Study ; Protein Binding ; Protein Domains ; Software ; Staining and Labeling ; Time Factors
Czasopismo naukowe
Tytuł :
Visualization of protein sequence space with force-directed graphs, and their application to the choice of target-template pairs for homology modelling.
Autorzy :
Mead DJT; Division of Biomedical & Life Sciences, Faculty of Health & Medicine, Lancaster University, Lancaster, LA1 4YT, UK. Electronic address: .
Lunagomez S; Department of Mathematics & Statistics, Lancaster University, Lancaster, LA1 4YF, UK. Electronic address: .
Gatherer D; Division of Biomedical & Life Sciences, Faculty of Health & Medicine, Lancaster University, Lancaster, LA1 4YT, UK. Electronic address: .
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Źródło :
Journal of molecular graphics & modelling [J Mol Graph Model] 2019 Nov; Vol. 92, pp. 180-191. Date of Electronic Publication: 2019 Jul 26.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier Science, Inc Country of Publication: United States NLM ID: 9716237 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-4243 (Electronic) Linking ISSN: 10933263 NLM ISO Abbreviation: J. Mol. Graph. Model. Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Molecular Dynamics Simulation*
Proteins/*chemistry
Algorithms ; Humans ; Models, Molecular
Czasopismo naukowe
Tytuł :
Function determinants of TET proteins: the arrangements of sequence motifs with specific codes.
Autorzy :
Liu D; The State key Laboratory of Reproductive Regulation and Breeding of Grassland Livestock, College of Life Sciences, Inner Mongolia University, Hohhot, China.
Li G; The State key Laboratory of Reproductive Regulation and Breeding of Grassland Livestock, College of Life Sciences, Inner Mongolia University, Hohhot, China.
Zuo Y; The State key Laboratory of Reproductive Regulation and Breeding of Grassland Livestock, College of Life Sciences, Inner Mongolia University, Hohhot, China.
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Źródło :
Briefings in bioinformatics [Brief Bioinform] 2019 Sep 27; Vol. 20 (5), pp. 1826-1835.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
Journal Info :
Publisher: H. Stewart Publications Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief. Bioinformatics Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
DNA-Binding Proteins/*metabolism
Chromatin/metabolism ; DNA-Binding Proteins/chemistry
Czasopismo naukowe
Tytuł :
Comprehensive Detection of Isopeptides between Human Tissue Transglutaminase and Gluten Peptides.
Autorzy :
Lexhaller B; Leibniz-Institute for Food Systems Biology at the Technical University of Munich, Lise-Meitner-Str. 34, 85354 Freising, Germany. .
Ludwig C; Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich, Gregor-Mendel-Str. 4, 85354 Freising, Germany. .
Scherf KA; Leibniz-Institute for Food Systems Biology at the Technical University of Munich, Lise-Meitner-Str. 34, 85354 Freising, Germany. .; Department of Bioactive and Functional Food Chemistry, Institute of Applied Biosciences, Karlsruhe Institute of Technology (KIT), Adenauerring 20a, 76131 Karlsruhe, Germany. .
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Źródło :
Nutrients [Nutrients] 2019 Sep 20; Vol. 11 (10). Date of Electronic Publication: 2019 Sep 20.
Typ publikacji :
Journal Article
Journal Info :
Publisher: MDPI Publishing Country of Publication: Switzerland NLM ID: 101521595 Publication Model: Electronic Cited Medium: Internet ISSN: 2072-6643 (Electronic) Linking ISSN: 20726643 NLM ISO Abbreviation: Nutrients Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
GTP-Binding Proteins/*chemistry
Glutens/*chemistry
Peptides/*chemistry
Transglutaminases/*chemistry
Autoantibodies/chemistry ; Autoantibodies/immunology ; B-Lymphocytes/immunology ; Celiac Disease/immunology ; GTP-Binding Proteins/immunology ; Glutamine/chemistry ; Glutens/immunology ; Humans ; Lysine/chemistry ; Proteomics ; Transglutaminases/immunology
Czasopismo naukowe
Tytuł :
Sequence and Structural Analysis of AA9 and AA10 LPMOs: An Insight into the Basis of Substrate Specificity and Regioselectivity.
Autorzy :
Zhou X; State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China. .
Qi X; State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China. .
Huang H; State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China. .
Zhu H; State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, China. .
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2019 Sep 17; Vol. 20 (18). Date of Electronic Publication: 2019 Sep 17.
Typ publikacji :
Journal Article
Journal Info :
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Models, Molecular*
Mixed Function Oxygenases/*chemistry
Binding Sites ; Mixed Function Oxygenases/metabolism ; Molecular Docking Simulation ; Molecular Dynamics Simulation ; Protein Binding ; Protein Conformation ; Structure-Activity Relationship ; Substrate Specificity
Czasopismo naukowe
Tytuł :
Hemorrhagic stroke and renovascular hypertension with Grange syndrome arising from a novel pathogenic variant in YY1AP1.
Autorzy :
Saida K; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Kim CA; Genetics Unit, Instituto da Crianca, Faculdade de Medicina, Universidade de Sao Paulo, SP, Brazil.
Ceroni JRM; Genetics Unit, Instituto da Crianca, Faculdade de Medicina, Universidade de Sao Paulo, SP, Brazil.
Bertola DR; Genetics Unit, Instituto da Crianca, Faculdade de Medicina, Universidade de Sao Paulo, SP, Brazil.
Honjo RS; Genetics Unit, Instituto da Crianca, Faculdade de Medicina, Universidade de Sao Paulo, SP, Brazil.
Mitsuhashi S; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Takata A; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Mizuguchi T; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Miyatake S; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan.
Miyake N; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan. .
Matsumoto N; Department of Human Genetics, Graduate School of Medicine, Yokohama City University, Yokohama, Japan. .
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Źródło :
Journal of human genetics [J Hum Genet] 2019 Sep; Vol. 64 (9), pp. 885-890. Date of Electronic Publication: 2019 Jul 04.
Typ publikacji :
Case Reports; Journal Article
Journal Info :
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 9808008 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1435-232X (Electronic) Linking ISSN: 14345161 NLM ISO Abbreviation: J. Hum. Genet. Subsets: MEDLINE
MeSH Terms :
Amino Acid Sequence*
Sequence Deletion*
Arterial Occlusive Diseases/*genetics
Bone and Bones/*abnormalities
Brachydactyly/*genetics
Cell Cycle Proteins/*genetics
Heart Defects, Congenital/*genetics
Hypertension/*genetics
Hypertension, Renovascular/*genetics
Intracranial Hemorrhages/*genetics
Stroke/*genetics
Syndactyly/*genetics
Transcription Factors/*genetics
Arterial Occlusive Diseases/pathology ; Arterial Occlusive Diseases/physiopathology ; Bone and Bones/pathology ; Bone and Bones/physiopathology ; Brachydactyly/pathology ; Brachydactyly/physiopathology ; Child ; Female ; Heart Defects, Congenital/pathology ; Heart Defects, Congenital/physiopathology ; Homozygote ; Humans ; Hypertension/pathology ; Hypertension/physiopathology ; Hypertension, Renovascular/pathology ; Hypertension, Renovascular/physiopathology ; Intracranial Hemorrhages/pathology ; Intracranial Hemorrhages/physiopathology ; Stroke/pathology ; Stroke/physiopathology ; Syndactyly/pathology ; Syndactyly/physiopathology
SCR Disease Name :
Arterial Occlusive Disease, Progressive, with Hypertension, Heart Defects, Bone Fragility, and Brachysyndactyly
Czasopismo naukowe
Tytuł :
Development of a brain-permeable peptide nanofiber that prevents aggregation of Alzheimer pathogenic proteins.
Autorzy :
Tanaka, Naoki (AUTHOR)
Okuda, Michiaki (AUTHOR)
Nishigaki, Tatsutoshi (AUTHOR)
Tsuchiya, Nobuhiko (AUTHOR)
Kobayashi, Yukako (AUTHOR)
Uemura, Takuya (AUTHOR)
Kumo, Sayaka (AUTHOR)
Sugimoto, Hachiro (AUTHOR)
Miyata, Seiji (AUTHOR)
Waku, Tomonori (AUTHOR)
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Źródło :
PLoS ONE. 7/24/2020, Vol. 15 Issue 7, p1-22. 22p.
Czasopismo naukowe
Tytuł :
Plasmodium falciparum histidine-rich protein 2 diversity in Ghana.
Autorzy :
Addai-Mensah, Otchere (AUTHOR)
Dinko, Bismarck (AUTHOR)
Noagbe, Mark (AUTHOR)
Ameke, Selassie Louis (AUTHOR)
Annani-Akollor, Max Efui (AUTHOR)
Owiredu, Eddie-Williams (AUTHOR)
Mensah, Kofi (AUTHOR)
Tackie, Richmond (AUTHOR)
Togbe, Eliezer (AUTHOR)
Agyare-Kwabi, Comfort (AUTHOR)
Gyasi, Charles (AUTHOR)
Adu-Gyamfi, Constance (AUTHOR)
Debrah, Alexander Yaw (AUTHOR)
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Źródło :
Malaria Journal. 7/16/2020, Vol. 19 Issue 1, p1-8. 8p. 2 Diagrams, 5 Charts.
Czasopismo naukowe
Tytuł :
Molecular evolution of the ATP-binding cassette subfamily G member 2 gene subfamily and its paralogs in birds.
Autorzy :
Ma, Shengchao (AUTHOR)
Liu, Hehe (AUTHOR)
Sun, Wenqiang (AUTHOR)
Mustafa, Ahsan (AUTHOR)
Xi, Yang (AUTHOR)
Pu, Fajun (AUTHOR)
Li, Yanying (AUTHOR)
Han, Chunchun (AUTHOR)
Bai, Lili (AUTHOR)
Hua, He (AUTHOR)
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Źródło :
BMC Evolutionary Biology. 7/14/2020, Vol. 20 Issue 1, p1-14. 14p.
Czasopismo naukowe
Tytuł :
Functional characterization of a new terpene synthase from Plectranthus amboinicus.
Autorzy :
Ashaari, Nur Suhanawati (AUTHOR)
Ab. Rahim, Mohd Hairul (AUTHOR)
Sabri, Suriana (AUTHOR)
Lai, Kok Song (AUTHOR)
Song, Adelene Ai-Lian (AUTHOR)
Abdul Rahim, Raha (AUTHOR)
Wan Abdullah, Wan Muhamad Asrul Nizam (AUTHOR)
Ong Abdullah, Janna (AUTHOR)
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Źródło :
PLoS ONE. 7/2/2020, Vol. 15 Issue 7, p1-22. 22p.
Czasopismo naukowe

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