Temat: "Amino Acid Substitution" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: A single amino acid substitution in aromatic hydroxylase (HpaB) of Escherichia coli alters substrate specificity of the structural isomers of hydroxyphenylacetate.
Autorzy:: Kim H; Department of Bioscience and Biotechnology, Konkuk University, Seoul, 05029, Republic of Korea.
Kim S; Department of Bioscience and Biotechnology, Konkuk University, Seoul, 05029, Republic of Korea.
Kim D; Department of Bioscience and Biotechnology, Konkuk University, Seoul, 05029, Republic of Korea.
Yoon SH; Department of Bioscience and Biotechnology, Konkuk University, Seoul, 05029, Republic of Korea. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2020 May 06; Vol. 20 (1), pp. 109. Date of Electronic Publication: 2020 May 06.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acid Substitution*
Escherichia coli/*growth & development
Mixed Function Oxygenases/*genetics
Mixed Function Oxygenases/*metabolism
Binding Sites ; Catalytic Domain ; Escherichia coli/classification ; Escherichia coli/enzymology ; Escherichia coli/genetics ; Isomerism ; Mixed Function Oxygenases/chemistry ; Models, Molecular ; Phenylacetates/chemistry ; Phenylacetates/metabolism ; Phylogeny ; Protein Structure, Secondary ; Species Specificity ; Substrate Specificity

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Skocz do pozycji: 2.

Tytuł:: Whole genome sequencing and characteristics of Escherichia coli with co-existence of ESBL and mcr genes from pigs.
Autorzy:: Trongjit S; Research Unit in Microbial Food Safety and Antimicrobial Resistance, Department of Veterinary Public Health, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand.
Chuanchuen R; Research Unit in Microbial Food Safety and Antimicrobial Resistance, Department of Veterinary Public Health, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2021 Nov 16; Vol. 16 (11), pp. e0260011. Date of Electronic Publication: 2021 Nov 16 (Print Publication: 2021).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Escherichia coli/*classification
Escherichia coli Infections/*veterinary
Escherichia coli Proteins/*genetics
Swine Diseases/*microbiology
Whole Genome Sequencing/*methods
Amino Acid Substitution ; Animals ; Drug Resistance, Bacterial ; Escherichia coli/genetics ; Escherichia coli/immunology ; Escherichia coli/isolation & purification ; High-Throughput Nucleotide Sequencing ; Interspersed Repetitive Sequences ; Phylogeny ; Plasmids/genetics ; Serogroup ; Swine ; Thailand

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Skocz do pozycji: 3.

Tytuł:: Fine-tuning the activity and stability of an evolved enzyme active-site through noncanonical amino-acids.
Autorzy:: Wilkinson HC; Department of Biochemical Engineering, University College London, London, UK.
Dalby PA; Department of Biochemical Engineering, University College London, London, UK.; Pokaż więcej
Źródło:: The FEBS journal [FEBS J] 2021 Mar; Vol. 288 (6), pp. 1935-1955. Date of Electronic Publication: 2020 Sep 24.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acids/*genetics
Enzyme Stability/*genetics
Escherichia coli/*genetics
Escherichia coli Proteins/*genetics
Transketolase/*genetics
Amino Acid Substitution ; Amino Acids/chemistry ; Amino Acids/metabolism ; Binding Sites/genetics ; Biocatalysis ; Catalytic Domain ; Escherichia coli/enzymology ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/metabolism ; Kinetics ; Molecular Docking Simulation ; Mutagenesis, Site-Directed ; Protein Denaturation ; Substrate Specificity ; Temperature ; Transketolase/chemistry ; Transketolase/metabolism

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Skocz do pozycji: 4.

Tytuł:: Probing remote residues important for catalysis in Escherichia coli ornithine transcarbamoylase.
Autorzy:: Ngu L; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.
Winters JN; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.
Nguyen K; Department of Physics, Northeastern University, Boston, MA, United States of America.
Ramos KE; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.
DeLateur NA; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.
Makowski L; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.; Department of Bioengineering, Northeastern University, Boston, MA, United States of America.
Whitford PC; Department of Physics, Northeastern University, Boston, MA, United States of America.
Ondrechen MJ; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.
Beuning PJ; Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2020 Feb 06; Vol. 15 (2), pp. e0228487. Date of Electronic Publication: 2020 Feb 06 (Print Publication: 2020).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Protein Interaction Domains and Motifs*/genetics
Escherichia coli/*enzymology
Ornithine Carbamoyltransferase/*chemistry
Ornithine Carbamoyltransferase/*metabolism
Protein Interaction Mapping/*methods
Amino Acid Sequence ; Amino Acid Substitution/genetics ; Base Sequence ; Binding Sites ; Carbamyl Phosphate/chemistry ; Carbamyl Phosphate/metabolism ; Catalysis ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Kinetics ; Mutagenesis, Site-Directed ; Ornithine/metabolism ; Ornithine Carbamoyltransferase/genetics ; Protein Binding ; Protein Conformation ; Substrate Specificity/genetics

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Skocz do pozycji: 5.

Tytuł:: A variant of the Escherichia coli anaerobic transcription factor FNR exhibiting diminished promoter activation function enhances ionizing radiation resistance.
Autorzy:: Bruckbauer ST; Department of Biochemistry, University of Wisconsin - Madison, Madison, Wisconsin, United States of America.
Trimarco JD; Department of Biochemistry, University of Wisconsin - Madison, Madison, Wisconsin, United States of America.
Henry C; Department of Biochemistry, University of Wisconsin - Madison, Madison, Wisconsin, United States of America.
Wood EA; Department of Biochemistry, University of Wisconsin - Madison, Madison, Wisconsin, United States of America.
Battista JR; Department of Biological Sciences, Louisiana State University and A & M College, Baton Rouge, Louisiana, United States of America.
Cox MM; Department of Biochemistry, University of Wisconsin - Madison, Madison, Wisconsin, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2019 Jan 23; Vol. 14 (1), pp. e0199482. Date of Electronic Publication: 2019 Jan 23 (Print Publication: 2019).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gamma Rays*
Mutation, Missense*
Promoter Regions, Genetic*
Radiation Tolerance*
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Gene Expression Regulation, Bacterial/*radiation effects
Iron-Sulfur Proteins/*metabolism
Amino Acid Substitution ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Iron-Sulfur Proteins/genetics

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Skocz do pozycji: 6.

Tytuł:: The Ec-NhaA antiporter switches from antagonistic to synergistic antiport upon a single point mutation.
Autorzy:: Dwivedi M; Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Givat Ram, Jerusalem-91904, Israel.
Sukenik S; Institute of Chemistry, the Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem-91904, Israel.
Friedler A; Institute of Chemistry, the Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem-91904, Israel.
Padan E; Department of Biological Chemistry, Alexander Silberman Institute of Life Sciences, Givat Ram, Jerusalem-91904, Israel.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2016 Mar 29; Vol. 6, pp. 23339. Date of Electronic Publication: 2016 Mar 29.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acid Substitution*
Point Mutation*
Escherichia coli/*genetics
Escherichia coli Proteins/*genetics
Sodium-Hydrogen Exchangers/*genetics
Binding Sites/genetics ; Crystallography, X-Ray ; Escherichia coli/metabolism ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/metabolism ; Hydrogen/metabolism ; Hydrogen-Ion Concentration ; Ion Transport ; Kinetics ; Lithium/metabolism ; Models, Molecular ; Protein Binding/genetics ; Protein Domains ; Sodium/metabolism ; Sodium-Hydrogen Exchangers/chemistry ; Sodium-Hydrogen Exchangers/metabolism ; Thermodynamics

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Skocz do pozycji: 7.

Tytuł:: Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Autorzy:: Watanabe TM; RIKEN Quantitative Biology Center (QBiC), Suita, Osaka, Japan ; PRESTO, Japan Science and Technology Agency, Kawaguchi, Saitama, Japan ; WPI, Immunology Frontier Research Center, Osaka University, Suita, Osaka, Japan ; Graduate School of Frontier Bioscience, Osaka University, Suita, Osaka, Japan.
Imada K
Yoshizawa K
Nishiyama M
Kato C
Abe F
Morikawa TJ
Kinoshita M
Fujita H
Yanagida T; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Aug 27; Vol. 8 (8), pp. e73212. Date of Electronic Publication: 2013 Aug 27 (Print Publication: 2013).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acid Substitution*
Mutation, Missense*
Bacterial Proteins/*metabolism
Escherichia coli/*metabolism
Glycine/*metabolism
Luminescent Proteins/*metabolism
Bacterial Proteins/genetics ; Escherichia coli/genetics ; Glycine/genetics ; Hydrostatic Pressure ; Luminescent Proteins/genetics

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Skocz do pozycji: 8.

Tytuł:: The LD loop as an important structural element required for transmission of the allosteric signal in the HtrA (DegP) protease from Escherichia coli.
Autorzy:: Figaj D; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland.
Gieldon A; Department of Theoretical Chemistry, Faculty of Chemistry, University of Gdansk, Poland.
Bartczak M; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland.
Koper T; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland.
Zarzecka U; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland.
Lesner A; Department of Molecular Biochemistry, Faculty of Chemistry, University of Gdansk, Poland.
Lipinska B; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland.
Skorko-Glonek J; Department of General and Medical Biochemistry, Faculty of Biology, University of Gdansk, Poland. .; Pokaż więcej
Źródło:: The FEBS journal [FEBS J] 2016 Sep; Vol. 283 (18), pp. 3471-87. Date of Electronic Publication: 2016 Aug 18.
Typ publikacji:: Journal Article
MeSH Terms:: Escherichia coli/*enzymology
Escherichia coli Proteins/*chemistry
Heat-Shock Proteins/*chemistry
Periplasmic Proteins/*chemistry
Serine Endopeptidases/*chemistry
Allosteric Site/genetics ; Amino Acid Substitution ; Enzyme Stability ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Escherichia coli Proteins/metabolism ; Heat-Shock Proteins/genetics ; Heat-Shock Proteins/metabolism ; Kinetics ; Models, Molecular ; Mutagenesis, Site-Directed ; Periplasmic Proteins/genetics ; Periplasmic Proteins/metabolism ; Protein Denaturation ; Protein Interaction Domains and Motifs ; Protein Structure, Quaternary ; Protein Structure, Secondary ; Recombinant Proteins/chemistry ; Recombinant Proteins/genetics ; Recombinant Proteins/metabolism ; Serine Endopeptidases/genetics ; Serine Endopeptidases/metabolism

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Skocz do pozycji: 9.

Tytuł:: The Lack of the Essential LptC Protein in the Trans-Envelope Lipopolysaccharide Transport Machine Is Circumvented by Suppressor Mutations in LptF, an Inner Membrane Component of the Escherichia coli Transporter.
Autorzy:: Benedet M; Dipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Falchi FA; Dipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Puccio S; Scuola di Dottorato in Medicina Molecolare e Traslazionale, Università degli Studi di Milano, Segrate, Italy.; Istituto di Tecnologie Biomediche, Consiglio Nazionale delle Ricerche, Milan, Italy.
Di Benedetto C; Dipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Peano C; Istituto di Tecnologie Biomediche, Consiglio Nazionale delle Ricerche, Milan, Italy.
Polissi A; Dipartimento di Biotecnologie e Bioscienze, Università degli Studi di Milano-Bicocca, Milan, Italy.
Dehò G; Dipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2016 Aug 16; Vol. 11 (8), pp. e0161354. Date of Electronic Publication: 2016 Aug 16 (Print Publication: 2016).
Typ publikacji:: Journal Article
MeSH Terms:: Suppression, Genetic*
ATP-Binding Cassette Transporters/*genetics
ATP-Binding Cassette Transporters/*metabolism
Cell Membrane/*metabolism
Escherichia coli/*cytology
Escherichia coli Proteins/*genetics
Escherichia coli Proteins/*metabolism
Lipopolysaccharides/*metabolism
Membrane Proteins/*deficiency
Amino Acid Substitution ; Biological Transport ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Phenotype

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Skocz do pozycji: 10.

Tytuł:: Effects of substitutions at position 180 in the Escherichia coli RNA polymerase σ 70 subunit.
Autorzy:: Koroleva ON; Chemical Faculty, Lomonosov Moscow State University, 119992 Moscow, Russia. />Busby SJ
Drutsa VL; Pokaż więcej
Źródło:: Journal of biosciences [J Biosci] 2011 Mar; Vol. 36 (1), pp. 43-54.
Typ publikacji:: Journal Article
MeSH Terms:: Models, Molecular*
Amino Acid Substitution/*physiology
DNA-Directed RNA Polymerases/*genetics
DNA-Directed RNA Polymerases/*metabolism
Escherichia coli/*genetics
Sigma Factor/*genetics
Sigma Factor/*metabolism
Amino Acid Substitution/genetics ; Base Sequence ; Electrophoresis ; Electrophoretic Mobility Shift Assay ; Molecular Sequence Data ; Oligonucleotides/genetics ; Plasmids/genetics ; Potassium Permanganate ; Promoter Regions, Genetic/genetics

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Skocz do pozycji: 11.

Tytuł:: DNA Metabolism in Balance: Rapid Loss of a RecA-Based Hyperrec Phenotype.
Autorzy:: Bakhlanova IV; Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, 188300, Russia.; Peter the Great St. Petersburg Polytechnic University, Saint-Petersburg, 195251, Russia.
Dudkina AV; Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, 188300, Russia.
Wood EA; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, 53706-1544, United States of America.
Lanzov VA; Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, 188300, Russia.
Cox MM; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, 53706-1544, United States of America.
Baitin DM; Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, 188300, Russia.; Peter the Great St. Petersburg Polytechnic University, Saint-Petersburg, 195251, Russia.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2016 Apr 28; Vol. 11 (4), pp. e0154137. Date of Electronic Publication: 2016 Apr 28 (Print Publication: 2016).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Bacterial Proteins/*genetics
DNA, Bacterial/*genetics
Escherichia coli/*genetics
Escherichia coli Proteins/*genetics
Rec A Recombinases/*genetics
Amino Acid Substitution ; Arginine/metabolism ; Aspartic Acid/metabolism ; Bacterial Proteins/metabolism ; Base Sequence ; Conjugation, Genetic ; DNA, Bacterial/metabolism ; Escherichia coli/metabolism ; Escherichia coli Proteins/metabolism ; Genotype ; Mutation ; Neisseria gonorrhoeae/chemistry ; Phenotype ; Plasmids/chemistry ; Plasmids/metabolism ; Promoter Regions, Genetic ; Rec A Recombinases/metabolism ; Recombinational DNA Repair

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Skocz do pozycji: 12.

Tytuł:: Novel mode of inhibition by D-tagatose 6-phosphate through a Heyns rearrangement in the active site of transaldolase B variants.
Autorzy:: Stellmacher L; Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70550 Stuttgart, Germany.
Sandalova T; Science for Life Laboratory, Department of Medicine, Solna, Karolinska Institutet, 17 165 Stockholm, Sweden.
Schneider S; Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70550 Stuttgart, Germany.
Schneider G; Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17 177 Stockholm, Sweden.
Sprenger GA; Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70550 Stuttgart, Germany.
Samland AK; Institut für Mikrobiologie, Universität Stuttgart, Allmandring 31, 70550 Stuttgart, Germany.; Pokaż więcej
Źródło:: Acta crystallographica. Section D, Structural biology [Acta Crystallogr D Struct Biol] 2016 Apr; Vol. 72 (Pt 4), pp. 467-76. Date of Electronic Publication: 2016 Mar 24.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Escherichia coli/*enzymology
Escherichia coli Proteins/*antagonists & inhibitors
Escherichia coli Proteins/*chemistry
Hexosephosphates/*chemistry
Transaldolase/*antagonists & inhibitors
Transaldolase/*chemistry
Amino Acid Substitution ; Catalytic Domain ; Crystallography, X-Ray ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Mutation, Missense ; Transaldolase/genetics

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Skocz do pozycji: 13.

Tytuł:: Voltage-Dependent Inactivation of MscS Occurs Independently of the Positively Charged Residues in the Transmembrane Domain.
Autorzy:: Nomura T; International Cooperative Research Project (ICORP)/Solution Oriented Research for Science and Technology (SORST), Cell-Mechanosensing Project, Japan Science and Technology Agency, Nagoya 466-8550, Japan; Department of Rehabilitation, Kyushu Nutrition Welfare University, Kitakyushu 800-029, Japan.
Sokabe M; International Cooperative Research Project (ICORP)/Solution Oriented Research for Science and Technology (SORST), Cell-Mechanosensing Project, Japan Science and Technology Agency, Nagoya 466-8550, Japan; Mechanobiology Laboratory, Nagoya University Graduate School of Medicine, Nagoya 466-8550, Japan.
Yoshimura K; International Cooperative Research Project (ICORP)/Solution Oriented Research for Science and Technology (SORST), Cell-Mechanosensing Project, Japan Science and Technology Agency, Nagoya 466-8550, Japan; Department of Machinery and Control Systems, Shibaura Institute of Technology, Saitama 337-8570, Japan.; Pokaż więcej
Źródło:: BioMed research international [Biomed Res Int] 2016; Vol. 2016, pp. 2401657. Date of Electronic Publication: 2016 Dec 22.
Typ publikacji:: Journal Article
MeSH Terms:: Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Ion Channels/*metabolism
Membrane Potentials/*physiology
Amino Acid Substitution ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Ion Channels/genetics ; Mutation, Missense ; Protein Domains

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Skocz do pozycji: 14.

Tytuł:: Substrate specificity of Escherichia coli thymidine phosphorylase.
Autorzy:: Panova NG; Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991, Russia. />Alexeev CS
Kuzmichov AS
Shcheveleva EV
Gavryushov SA
Polyakov KM
Kritzyn AM
Mikhailov SN
Esipov RS
Miroshnikov AI; Pokaż więcej
Źródło:: Biochemistry. Biokhimiia [Biochemistry (Mosc)] 2007 Jan; Vol. 72 (1), pp. 21-8.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acid Substitution*
Escherichia coli/*enzymology
Thymidine/*metabolism
Thymidine Phosphorylase/*chemistry
Catalytic Domain ; Crystallography, X-Ray ; Hydrogen-Ion Concentration ; Molecular Structure ; Nucleosides/metabolism ; Structure-Activity Relationship ; Substrate Specificity ; Thymidine Phosphorylase/metabolism

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Skocz do pozycji: 15.

Tytuł:: Scanning MscL Channels with Targeted Post-Translational Modifications for Functional Alterations.
Autorzy:: Iscla I; Department of Physiology, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas, United States of America.
Wray R; Department of Physiology, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas, United States of America.
Eaton C; Department of Physiology, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas, United States of America.
Blount P; Department of Physiology, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 Sep 14; Vol. 10 (9), pp. e0137994. Date of Electronic Publication: 2015 Sep 14 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Ion Channel Gating/*physiology
Ion Channels/*metabolism
Osmotic Pressure/*physiology
Protein Processing, Post-Translational/*physiology
Amino Acid Substitution ; Cysteine/chemistry ; Cysteine/genetics ; Cysteine/metabolism ; Escherichia coli/genetics ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/genetics ; Hydrophobic and Hydrophilic Interactions ; Ion Channels/chemistry ; Ion Channels/genetics ; Mutation, Missense ; Protein Structure, Tertiary

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Skocz do pozycji: 16.

Tytuł:: Electrostatic networks control plug stabilization in the PapC usher.
Autorzy:: Pham T; a Department of Biology and Biochemistry , University of Houston , Houston , TX and.
Henderson NS; b Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
Werneburg GT; b Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
Thanassi DG; b Center for Infectious Diseases and Department of Molecular Genetics and Microbiology, Stony Brook University , Stony Brook , NY , USA.
Delcour AH; a Department of Biology and Biochemistry , University of Houston , Houston , TX and.; Pokaż więcej
Źródło:: Molecular membrane biology [Mol Membr Biol] 2015 Aug-Dec; Vol. 32 (5-8), pp. 198-207. Date of Electronic Publication: 2016 May 16.
Typ publikacji:: Journal Article
MeSH Terms:: Cell Membrane/*chemistry
Escherichia coli/*chemistry
Escherichia coli Proteins/*chemistry
Porins/*chemistry
Amino Acid Substitution ; Cell Membrane/genetics ; Cell Membrane/metabolism ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Escherichia coli Proteins/genetics ; Escherichia coli Proteins/metabolism ; Humans ; Mutation ; Periplasm/chemistry ; Periplasm/genetics ; Periplasm/metabolism ; Porins/genetics ; Porins/metabolism ; Protein Domains ; Protein Stability ; Protein Structure, Secondary ; Static Electricity

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Skocz do pozycji: 17.

Tytuł:: The Molecular and Genetic Basis of Repeatable Coevolution between Escherichia coli and Bacteriophage T3 in a Laboratory Microcosm.
Autorzy:: Perry EB; Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon, United States of America; Memorial Sloan Kettering Cancer Center, New York, New York, United States of America.
Barrick JE; Institute for Cellular and Molecular Biology, Department of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, United States of America.
Bohannan BJ; Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 Jun 26; Vol. 10 (6), pp. e0130639. Date of Electronic Publication: 2015 Jun 26 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Bacteriophage T3*/genetics
Bacteriophage T3*/metabolism
Directed Molecular Evolution*
Escherichia coli*/genetics
Escherichia coli*/virology
Escherichia coli Proteins*/genetics
Escherichia coli Proteins*/metabolism
Glucosyltransferases*/genetics
Glucosyltransferases*/metabolism
Mutation, Missense*
Viral Proteins*/genetics
Viral Proteins*/metabolism
Amino Acid Substitution

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Skocz do pozycji: 18.

Tytuł:: Cytoplasmic Domain of MscS Interacts with Cell Division Protein FtsZ: A Possible Non-Channel Function of the Mechanosensitive Channel in Escherichia Coli.
Autorzy:: Koprowski P; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.
Grajkowski W; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.
Balcerzak M; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.
Filipiuk I; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.
Fabczak H; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.
Kubalski A; Department of Cell Biology, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Pasteur 3, Warsaw, Poland.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2015 May 21; Vol. 10 (5), pp. e0127029. Date of Electronic Publication: 2015 May 21 (Print Publication: 2015).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Mechanotransduction, Cellular*
Protein Interaction Domains and Motifs*
Bacterial Proteins/*metabolism
Cytoskeletal Proteins/*metabolism
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Ion Channels/*metabolism
Amino Acid Motifs ; Amino Acid Sequence ; Amino Acid Substitution ; Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Cytoskeletal Proteins/chemistry ; Cytoskeletal Proteins/genetics ; Escherichia coli/genetics ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/genetics ; Gene Expression ; Ion Channels/chemistry ; Models, Molecular ; Mutation ; Protein Binding ; Protein Conformation ; Protein Multimerization ; beta-Lactam Resistance/genetics

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Skocz do pozycji: 19.

Tytuł:: Demonstration of the importance and usefulness of manipulating non-active-site residues in protein design.
Autorzy:: Shimotohno A; Department of Biology, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
Oue S
Yano T
Kuramitsu S
Kagamiyama H; Pokaż więcej
Źródło:: Journal of biochemistry [J Biochem] 2001 Jun; Vol. 129 (6), pp. 943-8.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Amino Acid Substitution*
Directed Molecular Evolution*
Mutagenesis, Site-Directed*
Aspartate Aminotransferases/*chemistry
Aspartate Aminotransferases/*metabolism
Escherichia coli/*enzymology
Amino Acids/metabolism ; Aspartate Aminotransferases/genetics ; Binding Sites ; Catalysis ; Escherichia coli/genetics ; Kinetics ; Models, Molecular ; Mutation ; Protein Structure, Tertiary ; Structure-Activity Relationship ; Thermodynamics

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Tytuł:: A new suite of tnaA mutants suggests that Escherichia coli tryptophanase is regulated by intracellular sequestration and by occlusion of its active site.
Autorzy:: Li G; Department of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, AR, 72205-7199, USA. .
Young KD; Department of Microbiology and Immunology, University of Arkansas for Medical Sciences, Little Rock, AR, 72205-7199, USA. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2015 Feb 04; Vol. 15, pp. 14. Date of Electronic Publication: 2015 Feb 04.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Gene Expression Regulation, Bacterial*
Gene Expression Regulation, Enzymologic*
Escherichia coli/*enzymology
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Tryptophanase/*metabolism
Amino Acid Substitution ; Catalytic Domain ; DNA Mutational Analysis ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Sequence Deletion ; Tryptophanase/genetics

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