Temat: "Archaeal Proteins" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: The secretome of Thermococcus barophilus in the presence of carbohydrates and the potential role of the TrmBL4 regulator.
Autorzy:: Batour M; Univ Brest, CNRS, Ifremer, Laboratoire de Biologie et d'Écologie des Écosystèmes marins profonds (BEEP), IUEM, Plouzané, France.; Laboratory of Applied Biotechnology, Azm Center for Research in Biotechnology and Its Applications, Lebanese University, Tripoli, Lebanon.
Laurent S; Univ Brest, CNRS, Ifremer, Laboratoire de Biologie et d'Écologie des Écosystèmes marins profonds (BEEP), IUEM, Plouzané, France.
Moalic Y; Univ Brest, CNRS, Ifremer, Laboratoire de Biologie et d'Écologie des Écosystèmes marins profonds (BEEP), IUEM, Plouzané, France.; LabISEN, Yncréa Ouest, Brest, France.
Chamieh H; Laboratory of Applied Biotechnology, Azm Center for Research in Biotechnology and Its Applications, Lebanese University, Tripoli, Lebanon.
Taha S; Laboratory of Applied Biotechnology, Azm Center for Research in Biotechnology and Its Applications, Lebanese University, Tripoli, Lebanon.
Jebbar M; Univ Brest, CNRS, Ifremer, Laboratoire de Biologie et d'Écologie des Écosystèmes marins profonds (BEEP), IUEM, Plouzané, France.; Pokaż więcej
Źródło:: Environmental microbiology reports [Environ Microbiol Rep] 2023 Dec; Vol. 15 (6), pp. 530-544. Date of Electronic Publication: 2023 Jul 26.
Typ publikacji:: Journal Article
MeSH Terms:: Thermococcus*/genetics
Thermococcus*/metabolism
Archaeal Proteins*/genetics
Archaeal Proteins*/metabolism
Secretome ; Carbohydrates ; Sugars/metabolism

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Skocz do pozycji: 2.

Tytuł:: Analysis of Lsm Protein-Mediated Regulation in the Haloarchaeon Haloferax mediterranei .
Autorzy:: Payá G; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.
Bautista V; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.
Pastor-Soler S; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.
Camacho M; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.
Esclapez J; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.
Bonete MJ; Department of Biochemistry and Molecular Biology and Soil Science and Agricultural Chemistry, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2024 Jan 01; Vol. 25 (1). Date of Electronic Publication: 2024 Jan 01.
Typ publikacji:: Journal Article
MeSH Terms:: Haloferax mediterranei*/genetics
Archaeal Proteins*/genetics
Heat-Shock Proteins ; Archaea ; Nitrogen

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Skocz do pozycji: 3.

Tytuł:: Visualizing the DNA repair process by a photolyase at atomic resolution.
Autorzy:: Maestre-Reyna M; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.; Department of Chemistry, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.
Wang PH; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Nango E; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577, Japan.
Hosokawa Y; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.; Department of Chemistry, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.; Division of Chemistry, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, Japan.
Saft M; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Furrer A; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Yang CH; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Gusti Ngurah Putu EP; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Wu WJ; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Emmerich HJ; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Caramello N; European Synchrotron Radiation Facility, 38043 Grenoble, France.; Hamburg Centre for Ultrafast Imaging, Universität Hamburg, 22761 Hamburg, Germany.
Franz-Badur S; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Yang C; Department of Physics, The Ohio State University, Columbus, OH 43210, USA.
Engilberge S; European Synchrotron Radiation Facility, 38043 Grenoble, France.; Université Grenoble Alpes, CNRS, CEA, Institut de Biologie Structurale (IBS), 38044 Grenoble, France.
Wranik M; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Glover HL; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Weinert T; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Wu HY; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Lee CC; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Huang WC; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Huang KF; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Chang YK; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Liao JH; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Weng JH; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Gad W; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Chang CW; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Pang AH; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.
Yang KC; Department of Chemistry, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.
Lin WT; Department of Chemistry, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.
Chang YC; Department of Chemistry, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.
Gashi D; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Beale E; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Ozerov D; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Nass K; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Knopp G; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Johnson PJM; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Cirelli C; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Milne C; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Bacellar C; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Sugahara M; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.
Owada S; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan.
Joti Y; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan.
Yamashita A; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan.
Tanaka R; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan.
Tanaka T; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan.
Luo F; Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan.
Tono K; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan.
Zarzycka W; Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Müller P; Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
Alahmad MA; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Bezold F; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Fuchs V; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Gnau P; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Kiontke S; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Korf L; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Reithofer V; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Rosner CJ; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Seiler EM; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Watad M; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Werel L; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Spadaccini R; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.; Dipartimento di Scienze e tecnologie, Universita degli studi del Sannio, Benevento, Italy.
Yamamoto J; Division of Chemistry, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531, Japan.
Iwata S; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.; Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan.
Zhong D; Department of Physics, The Ohio State University, Columbus, OH 43210, USA.; Department of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210, USA.; Center for Ultrafast Science and Technology, Shanghai Jiao Tong University, Shanghai 200240, China.
Standfuss J; Paul Scherrer Institute, Forschungstrasse 111, 5232 Villigen PSI, Switzerland.
Royant A; European Synchrotron Radiation Facility, 38043 Grenoble, France.; Université Grenoble Alpes, CNRS, CEA, Institut de Biologie Structurale (IBS), 38044 Grenoble, France.
Bessho Y; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.; RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan.
Essen LO; Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, Marburg 35032, Germany.
Tsai MD; Institute of Biological Chemistry, Academia Sinica, 128 Academia Rd. Sec. 2, Nankang, Taipei 115, Taiwan.; Institute of Biochemical Sciences, National Taiwan University, 1, Roosevelt Rd. Sec. 4, Taipei 106, Taiwan.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2023 Dec; Vol. 382 (6674), pp. eadd7795. Date of Electronic Publication: 2023 Dec 01.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/chemistry
Deoxyribodipyrimidine Photo-Lyase*/chemistry
DNA Repair*
Methanosarcina*/enzymology
Pyrimidine Dimers*/chemistry
Catalysis ; Crystallography/methods ; DNA/chemistry ; DNA/radiation effects ; Protein Conformation ; Ultraviolet Rays

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Skocz do pozycji: 4.

Tytuł:: Similar mutation rates but different mutation spectra in moderate and extremely halophilic archaea.
Autorzy:: Kucukyildirim S; Department of Biology, Hacettepe University, Ankara 06800, Turkey.
Ozdemirel HO; Department of Biology, Hacettepe University, Ankara 06800, Turkey.
Lynch M; Biodesign Center for Mechanisms of Evolution, Arizona State University, Tempe, AZ 85287, USA.; Pokaż więcej
Źródło:: G3 (Bethesda, Md.) [G3 (Bethesda)] 2023 Mar 09; Vol. 13 (3).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Haloferax volcanii*/genetics
Haloferax volcanii*/metabolism
Archaeal Proteins*/genetics
Archaeal Proteins*/metabolism
Mutation Rate ; Mutation ; DNA Repair ; Archaea/genetics

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Skocz do pozycji: 5.

Tytuł:: Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Autorzy:: Meagher M; Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Myasnikov A; Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Enemark EJ; Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.; Department of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, 4301 W. Markham St., Little Rock, AR 72205, USA.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Nov 24; Vol. 23 (23). Date of Electronic Publication: 2022 Nov 24.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/genetics
Archaeal Proteins*/metabolism
Sulfolobus solfataricus*/genetics
Sulfolobus solfataricus*/metabolism
DNA Helicases*/genetics
DNA Helicases*/metabolism
Adenosine Triphosphatases/metabolism ; DNA Replication ; Minichromosome Maintenance Proteins/metabolism ; Translocation, Genetic

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Skocz do pozycji: 6.

Tytuł:: Diversity and Potential Multifunctionality of Archaeal CetZ Tubulin-like Cytoskeletal Proteins.
Autorzy:: Brown HJ; The Australian Institute for Microbiology and Infection, University of Technology Sydney, Sydney, NSW 2007, Australia.
Duggin IG; The Australian Institute for Microbiology and Infection, University of Technology Sydney, Sydney, NSW 2007, Australia.; Pokaż więcej
Źródło:: Biomolecules [Biomolecules] 2023 Jan 09; Vol. 13 (1). Date of Electronic Publication: 2023 Jan 09.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Cytoskeletal Proteins*/metabolism
Archaeal Proteins*/metabolism
Archaea/genetics ; Archaea/metabolism ; Tubulin/genetics ; Tubulin/metabolism ; Bacterial Proteins/metabolism ; Bacteria/metabolism

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Skocz do pozycji: 7.

Tytuł:: Dissection of Functional Domains of Orc1-2, the Archaeal Global DNA Damage-Responsive Regulator.
Autorzy:: Liu X; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.
Sun M; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.; Archaea Centre, Department of Biology, University of Copenhagen, Ole Maaløes Vej 5, DK-2200 Copenhagen, Denmark.
Xu R; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.
Shen Y; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.
Huang Q; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.
Feng X; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.
She Q; CRISPR and Archaea Biology Research Center, Microbial Technology Institute and State Key Laboratory of Microbial Technology, Shandong University, 72 Binhai Road, Jimo, Qingdao 266237, China.; Archaea Centre, Department of Biology, University of Copenhagen, Ole Maaløes Vej 5, DK-2200 Copenhagen, Denmark.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Nov 23; Vol. 23 (23). Date of Electronic Publication: 2022 Nov 23.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/metabolism
DNA, Archaeal/metabolism ; Protein Binding ; Origin Recognition Complex/genetics ; Origin Recognition Complex/metabolism ; DNA Damage/genetics ; Adenosine Triphosphate/metabolism ; ATPases Associated with Diverse Cellular Activities/metabolism

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Skocz do pozycji: 8.

Tytuł:: Prokaryotic innate immunity through pattern recognition of conserved viral proteins.
Autorzy:: Gao LA; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Society of Fellows, Harvard University, Cambridge, MA 02138, USA.
Wilkinson ME; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Strecker J; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Makarova KS; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Macrae RK; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Koonin EV; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Zhang F; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2022 Aug 12; Vol. 377 (6607), pp. eabm4096. Date of Electronic Publication: 2022 Aug 12.
Typ publikacji:: Journal Article
MeSH Terms:: Archaea*/immunology
Archaea*/virology
Archaeal Proteins*/chemistry
Archaeal Proteins*/classification
Archaeal Proteins*/genetics
Bacteria*/immunology
Bacteria*/virology
Bacterial Proteins*/chemistry
Bacterial Proteins*/classification
Bacterial Proteins*/genetics
Immunity, Innate*
NLR Proteins*/chemistry
NLR Proteins*/genetics
Receptors, Pattern Recognition*/chemistry
Receptors, Pattern Recognition*/classification
Receptors, Pattern Recognition*/genetics
Viral Proteins*/chemistry
Viral Proteins*/genetics
Animals ; Bacteriophages ; Cryoelectron Microscopy ; Phylogeny

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Skocz do pozycji: 9.

Tytuł:: Thermophilic Inorganic Pyrophosphatase Ton1914 from Thermococcus onnurineus NA1 Removes the Inhibitory Effect of Pyrophosphate.
Autorzy:: Li Y; Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Science, Jilin University, Changchun 130021, China.
Yang X; Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Science, Jilin University, Changchun 130021, China.
Gao R; Key Laboratory for Molecular Enzymology and Engineering of Ministry of Education, School of Life Science, Jilin University, Changchun 130021, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Oct 22; Vol. 23 (21). Date of Electronic Publication: 2022 Oct 22.
Typ publikacji:: Journal Article
MeSH Terms:: Thermococcus*
Archaeal Proteins*/metabolism
Inorganic Pyrophosphatase/genetics ; Inorganic Pyrophosphatase/metabolism ; Diphosphates/pharmacology ; Pyrophosphatases/genetics ; Pyrophosphatases/metabolism ; Uridine Diphosphate

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Skocz do pozycji: 10.

Tytuł:: Machine learning and statistics shape a novel path in archaeal promoter annotation.
Autorzy:: Martinez GS; Programa de Pós-Graduação em Biotecnologia, Universidade de Caxias do Sul, Av. Francisco Getúlio Vargas, 1130, Caxias do Sul, RS, CEP 95070-560, Brazil.
Pérez-Rueda E; Instituto de Investigaciones en Matemáticas Aplicadas y en Sistemas, Universidad Nacional Autónoma de México, Unidad Académica de Yucatán, Yucatán, Mérida, Mexico.
Sarkar S; Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur, Assam, 784028, India.
Kumar A; Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur, Assam, 784028, India.
de Ávila E Silva S; Programa de Pós-Graduação em Biotecnologia, Universidade de Caxias do Sul, Av. Francisco Getúlio Vargas, 1130, Caxias do Sul, RS, CEP 95070-560, Brazil. .; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2022 May 10; Vol. 23 (1), pp. 171. Date of Electronic Publication: 2022 May 10.
Typ publikacji:: Journal Article
MeSH Terms:: Archaea*/genetics
Archaeal Proteins*/chemistry
Archaeal Proteins*/genetics
Machine Learning ; Promoter Regions, Genetic ; Transcription, Genetic

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Skocz do pozycji: 11.

Tytuł:: The Finely Coordinated Action of SSB and NurA/HerA Complex Strictly Regulates the DNA End Resection Process in Saccharolobus solfataricus .
Autorzy:: De Falco M; Institute of Biosciences and BioResources, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.
Porritiello A; Institute of Biosciences and BioResources, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.
Rota F; Institute of Biosciences and BioResources, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.
Scognamiglio V; Department of Chemical Sciences and Materials Technologies, Institute of Crystallography, National Research Council, Via Salaria Km 29,300, Monterotondo, 00015 Rome, Italy.
Antonacci A; Department of Chemical Sciences and Materials Technologies, Institute of Crystallography, National Research Council, Via Salaria Km 29,300, Monterotondo, 00015 Rome, Italy.
Del Monaco G; Institute of Biosciences and BioResources, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.
De Felice M; Institute of Biosciences and BioResources, Consiglio Nazionale delle Ricerche, 80131 Naples, Italy.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Feb 26; Vol. 23 (5). Date of Electronic Publication: 2022 Feb 26.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/genetics
Archaeal Proteins*/metabolism
Sulfolobus solfataricus*/metabolism
DNA/metabolism ; DNA Helicases/metabolism ; DNA Repair ; DNA, Single-Stranded/metabolism

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Skocz do pozycji: 12.

Tytuł:: DNA-Binding Properties of a Novel Crenarchaeal Chromatin-Organizing Protein in Sulfolobus acidocaldarius .
Autorzy:: Lemmens L; Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.
Wang K; Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 11597 Stockholm, Sweden.
Ruykens E; Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.
Nguyen VT; Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.
Lindås AC; Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 11597 Stockholm, Sweden.
Willaert R; Research Group Structural Biology Brussels, Alliance Research Group VUB-UGent NanoMicrobiology, International Joint Research Group VUB-EFPL NanoBiotechnology & NanoMedicine, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.
Couturier M; Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.
Peeters E; Research Group of Microbiology, Department of Bioengineering Sciences, Vrije Universiteit Brussel, B-1050 Brussels, Belgium.; Pokaż więcej
Źródło:: Biomolecules [Biomolecules] 2022 Mar 30; Vol. 12 (4). Date of Electronic Publication: 2022 Mar 30.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Archaeal Proteins*/metabolism
Sulfolobus acidocaldarius*/genetics
Sulfolobus acidocaldarius*/metabolism
Archaea/genetics ; Chromatin/metabolism ; Chromatin Immunoprecipitation ; DNA/metabolism ; DNA-Binding Proteins/metabolism ; Sulfolobales/genetics

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Skocz do pozycji: 13.

Tytuł:: A functional promoter from the archaeon Halobacterium salinarum is also transcriptionally active in E. coli.
Autorzy:: Liang J; Key laboratory of Biometallurgy, Ministry of Education, School of Minerals Processing and Bioengineering, Central South University, 410083, Changsha, China.
Quan Z; College of Life Sciences, Wuhan University, 430000, Wuhan, China.
Zhu J; Key laboratory of Biometallurgy, Ministry of Education, School of Minerals Processing and Bioengineering, Central South University, 410083, Changsha, China. .; College of Life Sciences, Wuhan University, 430000, Wuhan, China. .
Gan M; Key laboratory of Biometallurgy, Ministry of Education, School of Minerals Processing and Bioengineering, Central South University, 410083, Changsha, China. .
Shen P; College of Life Sciences, Wuhan University, 430000, Wuhan, China. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2022 Mar 24; Vol. 22 (1), pp. 79. Date of Electronic Publication: 2022 Mar 24.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/genetics
Halobacterium salinarum*/genetics
Halobacterium salinarum*/metabolism
Archaea/metabolism ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Promoter Regions, Genetic

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Skocz do pozycji: 14.

Tytuł:: Interplay between Alba and Cren7 Regulates Chromatin Compaction in Sulfolobus solfataricus .
Autorzy:: Cajili MKM; National Institute of Molecular Biology and Biotechnology, University of the Philippines, Diliman, Quezon City 1101, Philippines.
Prieto EI; National Institute of Molecular Biology and Biotechnology, University of the Philippines, Diliman, Quezon City 1101, Philippines.; Pokaż więcej
Źródło:: Biomolecules [Biomolecules] 2022 Mar 22; Vol. 12 (4). Date of Electronic Publication: 2022 Mar 22.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Archaeal Proteins*/metabolism
Sulfolobus solfataricus*/chemistry
Sulfolobus solfataricus*/genetics
Sulfolobus solfataricus*/metabolism
Chromatin/genetics ; Chromatin/metabolism ; DNA/chemistry ; DNA-Binding Proteins/metabolism

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Skocz do pozycji: 15.

Tytuł:: NMR Structure and Biophysical Characterization of Thermophilic Single-Stranded DNA Binding Protein from Sulfolobus Solfataricus .
Autorzy:: Yang MJ; Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju 61005, Korea.
Kim J; Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju 61005, Korea.
Lee Y; Department of Chemistry, University of Colorado Denver, Denver, CO 80217-3364, USA.
Lee W; Department of Chemistry, University of Colorado Denver, Denver, CO 80217-3364, USA.
Park CJ; Department of Chemistry, Gwangju Institute of Science and Technology, Gwangju 61005, Korea.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2022 Mar 13; Vol. 23 (6). Date of Electronic Publication: 2022 Mar 13.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins*/metabolism
Sulfolobus solfataricus*/metabolism
Biophysics ; DNA, Single-Stranded/metabolism ; DNA-Binding Proteins/metabolism ; Nuclear Magnetic Resonance, Biomolecular ; Protein Binding

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Skocz do pozycji: 16.

Tytuł:: Structural insights into bifunctional thaumarchaeal crotonyl-CoA hydratase and 3-hydroxypropionyl-CoA dehydratase from Nitrosopumilus maritimus.
Autorzy:: Destan E; Department of Molecular Biology and Genetics, Koc University, 34450, Istanbul, Turkey.
Yuksel B; Department of Molecular Biology and Genetics, Koc University, 34450, Istanbul, Turkey.
Tolar BB; Department of Earth System Science, Stanford University, Stanford, CA, 94305, USA.
Ayan E; Department of Molecular Biology and Genetics, Koc University, 34450, Istanbul, Turkey.
Deutsch S; Nutcracker Therapeutics, Inc 5858 Horton Street, Suite 540, Emeryville, CA, 94608, USA.
Yoshikuni Y; The US Department of Energy, Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Wakatsuki S; Department of Structural Biology, Stanford University, Palo Alto, CA, 94305, USA. .; Biosciences Division, SLAC National Laboratory, Menlo Park, CA, 94025, USA. .
Francis CA; Department of Earth System Science, Stanford University, Stanford, CA, 94305, USA. .
DeMirci H; Department of Molecular Biology and Genetics, Koc University, 34450, Istanbul, Turkey. .; Stanford PULSE Institute, SLAC National Laboratory, Menlo Park, CA, 94025, USA. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2021 Nov 24; Vol. 11 (1), pp. 22849. Date of Electronic Publication: 2021 Nov 24.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Acyl Coenzyme A/*metabolism
Archaea/*enzymology
Archaeal Proteins/*metabolism
Carbon Dioxide/*metabolism
Enoyl-CoA Hydratase/*metabolism
Archaea/genetics ; Archaeal Proteins/chemistry ; Archaeal Proteins/genetics ; Catalysis ; Crystallography, X-Ray ; Enoyl-CoA Hydratase/chemistry ; Enoyl-CoA Hydratase/genetics ; Models, Molecular ; Protein Conformation ; Structure-Activity Relationship ; Substrate Specificity

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Skocz do pozycji: 17.

Tytuł:: Characterization of a Novel Thermostable Dye-Linked l-Lactate Dehydrogenase Complex and Its Application in Electrochemical Detection.
Autorzy:: Satomura T; Division of Engineering, Faculty of Engineering, University of Fukui, Fukui 910-8507, Japan.; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan.
Uno K; Department of Applied Chemistry Biotechnology, Graduate School of Engineering, University of Fukui, Fukui 910-8507, Japan.
Kurosawa N; Department of Science and Engineering for Sustainable Innovation, Faculty of Science and Engineering, Soka University, Tokyo 192-8577, Japan.
Sakuraba H; Department of Applied Biological Science, Faculty of Agriculture, Kagawa University, Takamatsu 761-0795, Japan.
Ohshima T; Department of Biomedical Engineering, Faculty of Engineering, Osaka Institute of Technology, Osaka 535-8585, Japan.
Suye SI; Division of Engineering, Faculty of Engineering, University of Fukui, Fukui 910-8507, Japan.; Life Science Innovation Center, University of Fukui, Fukui 910-8507, Japan.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2021 Dec 17; Vol. 22 (24). Date of Electronic Publication: 2021 Dec 17.
Typ publikacji:: Journal Article
MeSH Terms:: Archaeal Proteins/*genetics
L-Lactate Dehydrogenase/*genetics
Sulfolobaceae/*genetics
Archaeal Proteins/chemistry ; Biosensing Techniques ; Electron Transport ; Enzyme Stability ; Gene Expression ; L-Lactate Dehydrogenase/chemistry ; Multigene Family ; Oxidation-Reduction ; Protein Multimerization ; Protein Subunits/chemistry ; Protein Subunits/genetics ; Recombinant Proteins/chemistry ; Recombinant Proteins/genetics ; Sulfolobaceae/chemistry ; Temperature

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Skocz do pozycji: 18.

Tytuł:: An alternative domain-swapped structure of the Pyrococcus horikoshii PolII mini-intein.
Autorzy:: Williams JE; Department of Chemistry, College of the Holy Cross, 1 College Street, Worcester, MA, USA.
Jaramillo MV; Department of Chemistry, College of the Holy Cross, 1 College Street, Worcester, MA, USA.
Li Z; Division of Genetics, Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Pharmacology and Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, 85721, USA.
Zhao J; Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, USA.; China Agricultural University, Beijing, China.
Wang C; Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, USA.
Li H; Division of Genetics, Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Pharmacology and Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, 85721, USA.; Department of Biomedical Sciences, School of Public Health, University at Albany, Albany, NY, USA.
Mills KV; Department of Chemistry, College of the Holy Cross, 1 College Street, Worcester, MA, USA. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2021 Jun 03; Vol. 11 (1), pp. 11680. Date of Electronic Publication: 2021 Jun 03.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Inteins*
Protein Domains*
Pyrococcus horikoshii*
Archaeal Proteins/*chemistry
Amino Acid Sequence ; Archaeal Proteins/genetics ; Archaeal Proteins/metabolism ; Gene Expression ; Models, Molecular ; Protein Conformation ; Protein Interaction Domains and Motifs

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Skocz do pozycji: 19.

Tytuł:: Novel Glutamate-Putrescine Ligase Activity in Haloferax mediterranei : A New Function for glnA-2 Gene.
Autorzy:: Rodríguez-Herrero V; Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Division, Faculty of Science, University of Alicante, 03080 Alicante, Spain.
Peris A; Institute for Integrative Systems Biology, I2SysBio, Campus Burjassot, University of Valencia-CSIC, 46908 Valencia, Spain.
Camacho M; Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Division, Faculty of Science, University of Alicante, 03080 Alicante, Spain.
Bautista V; Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Division, Faculty of Science, University of Alicante, 03080 Alicante, Spain.
Esclapez J; Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Division, Faculty of Science, University of Alicante, 03080 Alicante, Spain.
Bonete MJ; Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Division, Faculty of Science, University of Alicante, 03080 Alicante, Spain.; Pokaż więcej
Źródło:: Biomolecules [Biomolecules] 2021 Aug 04; Vol. 11 (8). Date of Electronic Publication: 2021 Aug 04.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Archaeal*
Archaeal Proteins/*genetics
Escherichia coli Proteins/*genetics
Glutamic Acid/*metabolism
Haloferax mediterranei/*enzymology
Ligases/*genetics
Nitrogen Fixation/*genetics
Putrescine/*metabolism
Adenosine Triphosphate/metabolism ; Amino Acid Sequence ; Ammonia/metabolism ; Archaeal Proteins/metabolism ; Cloning, Molecular ; Computational Biology/methods ; Escherichia coli/enzymology ; Escherichia coli/genetics ; Escherichia coli Proteins/metabolism ; Gene Expression ; Genetic Vectors/chemistry ; Genetic Vectors/metabolism ; Haloferax mediterranei/genetics ; Isoenzymes/genetics ; Isoenzymes/metabolism ; Ligases/metabolism ; Phylogeny ; Protein Biosynthesis ; Recombinant Proteins/chemistry ; Recombinant Proteins/genetics ; Recombinant Proteins/metabolism ; Salmonella typhimurium/enzymology ; Salmonella typhimurium/genetics ; Sequence Alignment ; Sequence Homology, Amino Acid ; Substrate Specificity ; Transcription, Genetic

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Skocz do pozycji: 20.

Tytuł:: The leucine-responsive regulatory proteins/feast-famine regulatory proteins: an ancient and complex class of transcriptional regulators in bacteria and archaea.
Autorzy:: Ziegler CA; Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI, USA.
Freddolino PL; Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI, USA.; Department of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA.; Pokaż więcej
Źródło:: Critical reviews in biochemistry and molecular biology [Crit Rev Biochem Mol Biol] 2021 Aug; Vol. 56 (4), pp. 373-400. Date of Electronic Publication: 2021 Jun 20.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Review; Video-Audio Media
MeSH Terms:: Archaea/*metabolism
Archaeal Proteins/*metabolism
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Leucine-Responsive Regulatory Protein/*metabolism
Archaea/genetics ; Archaeal Proteins/genetics ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Leucine-Responsive Regulatory Protein/genetics

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