Autor: "Asmann, YW" - OpacWWW

Skocz do pozycji: 21.

Tytuł:: Chronically endurance-trained individuals preserve skeletal muscle mitochondrial gene expression with age but differences within age groups remain.
Autorzy:: Johnson ML; Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, 200 First St SW, Rochester, 55905, Minnesota.
Lanza IR; Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, 200 First St SW, Rochester, 55905, Minnesota.
Short DK; Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, 200 First St SW, Rochester, 55905, Minnesota.
Asmann YW; Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, 200 First St SW, Rochester, 55905, Minnesota.
Nair KS; Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, 200 First St SW, Rochester, 55905, Minnesota.; Pokaż więcej
Źródło:: Physiological reports [Physiol Rep] 2014 Dec 18; Vol. 2 (12). Date of Electronic Publication: 2014 Dec 18 (Print Publication: 2014).
Typ publikacji:: Journal Article

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 22.

Tytuł:: Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma.
Autorzy:: Cerhan JR; Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA.
Berndt SI; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Vijai J; Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Ghesquières H; 1] Department of Hematology, Centre Léon Bérard, Lyon, France. [2] Laboratoire de Biologie Moléculaire de la Cellule, UMR 5239, CNRS, Pierre-Benite, France.
McKay J; Genetic Cancer Susceptibility Group, Section of Genetics, International Agency for Research on Cancer, Lyon, France.
Wang SS; Department of Cancer Etiology, City of Hope Beckman Research Institute, Duarte, California, USA.
Wang Z; Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland, USA.
Yeager M; Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland, USA.
Conde L; 1] Department of Epidemiology, School of Public Health and Comprehensive Cancer Center, Birmingham, Alabama, USA. [2] Division of Environmental Health Sciences, University of California Berkeley School of Public Health, Berkeley, California, USA.
de Bakker PI; 1] Department of Medical Genetics and of Epidemiology, University Medical Center Utrecht, Utrecht, the Netherlands. [2] Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht, the Netherlands.
Nieters A; Center for Chronic Immunodeficiency, University Medical Center Freiburg, Freiburg, Germany.
Cox D; Lyon, France.
Burdett L; Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland, USA.
Monnereau A; 1] Environmental Epidemiology of Cancer Group, INSERM, Centre for Research in Epidemiology and Population Health (CESP), Villejuif, France. [2] UMRS 1018, Université Paris Sud, Villejuif, France. [3] Registre des Hémopathies Malignes de la Gironde, Institut Bergonié, Bordeaux, France.
Flowers CR; Winship Cancer Institute, Emory University School of Medicine, Atlanta, Georgia, USA.
De Roos AJ; 1] Department of Environmental and Occupational Health, Drexel University School of Public Health, Philadelphia, Pennsylvania, USA. [2] Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Brooks-Wilson AR; 1] Genome Sciences Centre, BC Cancer Agency, Vancouver, British Columbia, Canada. [2] Department of Biomedical Physiology and Kinesiology, Simon Fraser University, Burnaby, British Columbia, Canada.
Lan Q; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Severi G; 1] Human Genetics Foundation, Turin, Italy. [2] Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Victoria, Australia. [3] Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, University of Melbourne, Carlton, Victoria, Australia.
Melbye M; 1] Department of Epidemiology Research, Division of Health Surveillance and Research, Statens Serum Institut, Copenhagen, Denmark. [2] Department of Medicine, Stanford University School of Medicine, Stanford, California, USA.
Gu J; Department of Epidemiology, MD Anderson Cancer Center, Houston, Texas, USA.
Jackson RD; Division of Endocrinology, Diabetes and Metabolism, Ohio State University, Columbus, Ohio, USA.
Kane E; Department of Health Sciences, University of York, York, UK.
Teras LR; Epidemiology Research Program, American Cancer Society, Atlanta, Georgia, USA.
Purdue MP; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Vajdic CM; Prince of Wales Clinical School, University of New South Wales, Sydney, New South Wales, Australia.
Spinelli JJ; 1] Cancer Control Research, BC Cancer Agency, Vancouver, British Columbia, Canada. [2] School of Population and Public Health, University of British Columbia, Vancouver, British Columbia, Canada.
Giles GG; 1] Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Victoria, Australia. [2] Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, University of Melbourne, Carlton, Victoria, Australia.
Albanes D; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Kelly RS; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Medical Research Council (MRC)-Public Health England (PHE) Centre for Environment and Health, School of Public Health, Imperial College London, London, UK.
Zucca M; Department of Biomedical Science, University of Cagliari, Monserrato, Italy.
Bertrand KA; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Zeleniuch-Jacquotte A; 1] Department of Population Health, New York University School of Medicine, New York, New York, USA. [2] Cancer Institute, New York University School of Medicine, New York, New York, USA.
Lawrence C; Health Studies Sector, Westat, Rockville, Maryland, USA.
Hutchinson A; Cancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland, USA.
Zhi D; Department of Biostatistics, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Habermann TM; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Link BK; Department of Internal Medicine, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Novak AJ; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Dogan A; Department of Laboratory Medicine and Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Asmann YW; Division of Biomedical Statistics and Informatics, Mayo Clinic, Jacksonville, Florida, USA.
Liebow M; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Thompson CA; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Ansell SM; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Witzig TE; Department of Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Weiner GJ; Department of Internal Medicine, Carver College of Medicine, The University of Iowa, Iowa City, Iowa, USA.
Veron AS; Lyon, France.
Zelenika D; Centre National de Génotypage, Evry, France.
Tilly H; Centre Heni Becquerel, Rouen, France.
Haioun C; Department of Hematology, Centre Hospitalier Universitaire (CHU) Henri Mondor, Creteil, France.
Molina TJ; Department of Pathology, Necker Enfants Malades, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
Hjalgrim H; Department of Epidemiology Research, Division of Health Surveillance and Research, Statens Serum Institut, Copenhagen, Denmark.
Glimelius B; 1] Department of Oncology and Pathology, Karolinska Institutet, Karolinska University Hospital Solna, Stockholm, Sweden. [2] Department of Radiology, Oncology and Radiation Science, Uppsala University, Uppsala, Sweden.
Adami HO; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Bracci PM; Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California, USA.
Riby J; 1] Department of Epidemiology, School of Public Health and Comprehensive Cancer Center, Birmingham, Alabama, USA. [2] Division of Environmental Health Sciences, University of California Berkeley School of Public Health, Berkeley, California, USA.
Smith MT; Division of Environmental Health Sciences, University of California Berkeley School of Public Health, Berkeley, California, USA.
Holly EA; Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California, USA.
Cozen W; 1] Department of Preventive Medicine, University of Southern California Keck School of Medicine, University of Southern California, Los Angeles, California, USA. [2] Norris Comprehensive Cancer Center, University of Southern California Keck School of Medicine, University of Southern California, Los Angeles, California, USA.
Hartge P; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Morton LM; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Severson RK; Department of Family Medicine and Public Health Sciences, Wayne State University, Detroit, Michigan, USA.
Tinker LF; Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
North KE; 1] Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA. [2] Carolina Center for Genome Sciences, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Becker N; Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Benavente Y; 1] Unit of Infections and Cancer (UNIC), Cancer Epidemiology Research Programme, Institut Catala d'Oncologia, Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain. [2] Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Barcelona, Spain.
Boffetta P; Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Brennan P; Group of Genetic Epidemiology, Section of Genetics, International Agency for Research on Cancer, Lyon, France.
Foretova L; Department of Cancer Epidemiology and Genetics, Masaryk Memorial Cancer Institute and Masaryk University, Brno, Czech Republic.
Maynadie M; Registre des Hémopathies Malignes de Côte d'Or, University of Burgundy and Dijon University Hospital, Dijon, France.
Staines A; School of Nursing and Human Sciences, Dublin City University, Dublin, Ireland.
Lightfoot T; Department of Health Sciences, University of York, York, UK.
Crouch S; Department of Health Sciences, University of York, York, UK.
Smith A; Department of Health Sciences, University of York, York, UK.
Roman E; Department of Health Sciences, University of York, York, UK.
Diver WR; Epidemiology Research Program, American Cancer Society, Atlanta, Georgia, USA.
Offit K; Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Zelenetz A; Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Klein RJ; Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Villano DJ; Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Zheng T; Department of Environmental Health Sciences, Yale School of Public Health, New Haven, Connecticut, USA.
Zhang Y; Department of Environmental Health Sciences, Yale School of Public Health, New Haven, Connecticut, USA.
Holford TR; Department of Biostatistics, Yale School of Public Health, New Haven, Connecticut, USA.
Kricker A; Sydney School of Public Health, University of Sydney, Sydney, New South Wales, Australia.
Turner J; 1] Pathology, Australian School of Advanced Medicine, Macquarie University, Sydney, New South Wales, Australia. [2] Department of Histopathology, Douglass Hanly Moir Pathology, Macquarie Park, New South Wales, Australia.
Southey MC; Department of Pathology, University of Melbourne, Parkville, Victoria, Australia.
Clavel J; 1] Environmental Epidemiology of Cancer Group, INSERM, Centre for Research in Epidemiology and Population Health (CESP), Villejuif, France. [2] UMRS 1018, Université Paris Sud, Villejuif, France.
Virtamo J; Department of Chronic Disease Prevention, National Institute for Health and Welfare, Helsinki, Finland.
Weinstein S; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Riboli E; School of Public Health, Imperial College London, London, UK.
Vineis P; 1] Human Genetics Foundation, Turin, Italy. [2] Medical Research Council (MRC)-Public Health England (PHE) Centre for Environment and Health, School of Public Health, Imperial College London, London, UK.
Kaaks R; Division of Cancer Epidemiology, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Trichopoulos D; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Bureau of Epidemiologic Research, Academy of Athens, Athens, Greece. [3] Hellenic Health Foundation, Athens, Greece.
Vermeulen RC; 1] Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht, the Netherlands. [2] Institute for Risk Assessment Sciences, Utrecht University, Utrecht, the Netherlands.
Boeing H; Department of Epidemiology, German Institute for Human Nutrition, Potsdam, Germany.
Tjonneland A; Danish Cancer Society Research Center, Copenhagen, Denmark.
Angelucci E; Hematology Unit, Ospedale Oncologico di Riferimento Regionale A. Businco, Cagliari, Italy.
Di Lollo S; Department of Surgery and Translational Medicine, Section of Anatomo-Pathology, University of Florence, Florence, Italy.
Rais M; Department of Public Health, Clinical and Molecular Medicine, University of Cagliari, Monserrato, Italy.
Birmann BM; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Laden F; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA. [3] Department of Environmental Health, Harvard School of Public Health, Boston, Massachusetts, USA.
Giovannucci E; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA. [3] Department of Nutrition, Harvard School of Public Health, Boston, Massachusetts, USA.
Kraft P; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, USA.
Huang J; Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA.
Ma B; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] College of Information Science and Technology, Dalian Maritime University, Dalian, China.
Ye Y; Department of Epidemiology, MD Anderson Cancer Center, Houston, Texas, USA.
Chiu BC; Department of Health Studies, University of Chicago, Chicago, Illinois, USA.
Sampson J; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Liang L; 1] Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, USA. [2] Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, USA.
Park JH; Dongguk University-Seoul, Seoul, South Korea.
Chung CC; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Weisenburger DD; Department of Pathology, City of Hope National Medical Center, Duarte, California, USA.
Chatterjee N; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Fraumeni JF Jr; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Slager SL; Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA.
Wu X; Department of Epidemiology, MD Anderson Cancer Center, Houston, Texas, USA.
de Sanjose S; 1] Unit of Infections and Cancer (UNIC), Cancer Epidemiology Research Programme, Institut Catala d'Oncologia, Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain. [2] Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública (CIBERESP), Barcelona, Spain.
Smedby KE; Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden.
Salles G; 1] Laboratoire de Biologie Moléculaire de la Cellule, UMR 5239, CNRS, Pierre-Benite, France. [2] Department of Hematology, Hospices Civils de Lyon, Pierre-Benite, France. [3] Department of Hematology, Université Lyon 1, Pierre-Benite, France.
Skibola CF; 1] Department of Epidemiology, School of Public Health and Comprehensive Cancer Center, Birmingham, Alabama, USA. [2] Division of Environmental Health Sciences, University of California Berkeley School of Public Health, Berkeley, California, USA.
Rothman N; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.
Chanock SJ; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, Maryland, USA.; Pokaż więcej
Źródło:: Nature genetics [Nat Genet] 2014 Nov; Vol. 46 (11), pp. 1233-8. Date of Electronic Publication: 2014 Sep 28.
Typ publikacji:: Journal Article; Meta-Analysis; Research Support, N.I.H., Intramural
MeSH Terms:: Genetic Loci/*genetics
Genetic Predisposition to Disease/*genetics
Lymphoma, Large B-Cell, Diffuse/*genetics
White People/*genetics
Chromosome Mapping ; Computational Biology ; Genome-Wide Association Study ; Genotype ; Humans ; Likelihood Functions ; Polymorphism, Single Nucleotide/genetics ; Quantitative Trait Loci/genetics

Czasopismo naukowe

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Skocz do pozycji: 23.

Tytuł:: Recurrent PAX3-MAML3 fusion in biphenotypic sinonasal sarcoma.
Autorzy:: Wang X; 1] Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. [2].
Bledsoe KL; 1] Department of Biochemistry and Molecular Biology, Mayo Graduate School, Rochester, Minnesota, USA. [2].
Graham RP; 1] Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. [2].
Asmann YW; Department of Health Sciences Research, Mayo Clinic, Jacksonville, Florida, USA.
Viswanatha DS; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Lewis JE; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Lewis JT; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.
Chou MM; Department of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia and the Perelman School of Medicine, Philadelphia, Pennsylvania, USA.
Yaszemski MJ; Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota, USA.
Jen J; Medical Genome Facility, Center of Individualized Medicine, Mayo Clinic, Rochester, Minnesota, USA.
Westendorf JJ; Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota, USA.
Oliveira AM; 1] Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. [2] Department of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota, USA.; Pokaż więcej
Źródło:: Nature genetics [Nat Genet] 2014 Jul; Vol. 46 (7), pp. 666-8. Date of Electronic Publication: 2014 May 25.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Regulation, Developmental*
DNA-Binding Proteins/*genetics
Gene Fusion/*genetics
Nose Neoplasms/*genetics
Nuclear Proteins/*genetics
Oncogene Proteins, Fusion/*genetics
Paired Box Transcription Factors/*genetics
Paranasal Sinus Neoplasms/*genetics
Transcription Factors/*genetics
Chromosomes, Human, Pair 2/genetics ; Chromosomes, Human, Pair 4/genetics ; Humans ; Molecular Sequence Data ; Muscle Development/genetics ; Neuroectodermal Tumors/genetics ; Neuroectodermal Tumors/pathology ; Nose Neoplasms/pathology ; PAX3 Transcription Factor ; Paranasal Sinus Neoplasms/pathology ; Phenotype ; Response Elements/genetics ; Trans-Activators ; Translocation, Genetic/genetics

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Skocz do pozycji: 24.

Tytuł:: MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing.
Autorzy:: Kalari KR
Nair AA
Bhavsar JD
O'Brien DR
Davila JI
Bockol MA
Nie J
Tang X
Baheti S
Doughty JB
Middha S
Sicotte H
Thompson AE
Asmann YW
Kocher JP; Department of Health Sciences Research, Mayo Clinic, 200 First Street SW, Rochester, MN 55905, USA. .; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2014 Jun 27; Vol. 15, pp. 224. Date of Electronic Publication: 2014 Jun 27.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Profiling*
Health Facilities*
Software*
Genomics/*methods
High-Throughput Nucleotide Sequencing/*methods
Sequence Analysis, RNA/*methods
Base Sequence ; Exons/genetics ; Humans

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Skocz do pozycji: 25.

Tytuł:: Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors.
Autorzy:: Norton N; Department of Cancer Biology, Mayo Clinic, Jacksonville, Florida, United States of America.
Sun Z
Asmann YW
Serie DJ
Necela BM
Bhagwate A
Jen J
Eckloff BW
Kalari KR
Thompson KJ
Carr JM
Kachergus JM
Geiger XJ
Perez EA
Thompson EA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Nov 22; Vol. 8 (11), pp. e81925. Date of Electronic Publication: 2013 Nov 22 (Print Publication: 2013).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression*
Gene Fusion*
Polymorphism, Single Nucleotide*
Breast Neoplasms/*genetics
RNA, Messenger/*genetics
Breast Neoplasms/pathology ; Female ; Humans ; RNA, Untranslated/genetics ; Sequence Analysis, RNA ; Transcriptome

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Skocz do pozycji: 26.

Tytuł:: An integrated model of the transcriptome of HER2-positive breast cancer.
Autorzy:: Kalari KR; Department of Cancer Biology, Mayo Clinic, Jacksonville, Florida, United States of America ; Department of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota, United States of America.
Necela BM
Tang X
Thompson KJ
Lau M
Eckel-Passow JE
Kachergus JM
Anderson SK
Sun Z
Baheti S
Carr JM
Baker TR
Barman P
Radisky DC
Joseph RW
McLaughlin SA
Chai HS
Camille S
Rossell D
Asmann YW
Thompson EA
Perez EA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Nov 01; Vol. 8 (11), pp. e79298. Date of Electronic Publication: 2013 Nov 01 (Print Publication: 2013).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Models, Biological*
Transcriptome*
Breast Neoplasms/*genetics
Breast Neoplasms/*metabolism
Receptor, ErbB-2/*metabolism
Base Sequence ; Breast Neoplasms/drug therapy ; Breast Neoplasms/pathology ; Cell Line, Tumor ; Genomics ; Humans ; Molecular Targeted Therapy

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Skocz do pozycji: 27.

Tytuł:: Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol.
Autorzy:: Sun Z; Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America.
Asmann YW
Nair A
Zhang Y
Wang L
Kalari KR
Bhagwate AV
Baker TR
Carr JM
Kocher JP
Perez EA
Thompson EA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2013 Aug 19; Vol. 8 (8), pp. e71745. Date of Electronic Publication: 2013 Aug 19 (Print Publication: 2013).
Typ publikacji:: Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Data Interpretation, Statistical*
Gene Library*
Statistics as Topic*
Poly A/*genetics
Sequence Analysis, RNA/*methods
Cell Line ; Epithelial Cells/metabolism ; Exons/genetics ; Gene Expression Profiling ; Gene Expression Regulation ; Humans ; Polymorphism, Single Nucleotide/genetics ; RNA, Long Noncoding/genetics ; RNA, Messenger/genetics ; Reproducibility of Results

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Skocz do pozycji: 28.

Tytuł:: MicroRNA-mRNA interactions in a murine model of hyperoxia-induced bronchopulmonary dysplasia.
Autorzy:: Dong J; Division of General Thoracic Surgery, Department of Surgery, Mayo Clinic, Rochester, MN, USA.
Carey WA
Abel S
Collura C
Jiang G
Tomaszek S
Sutor S
Roden AC
Asmann YW
Prakash YS
Wigle DA; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2012 May 30; Vol. 13, pp. 204. Date of Electronic Publication: 2012 May 30.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Hyperoxia*
Lung Injury/*genetics
Lung Injury/*metabolism
MicroRNAs/*metabolism
RNA, Messenger/*metabolism
Animals ; Animals, Newborn ; Disease Models, Animal ; Gene Expression Profiling ; Lung/metabolism ; Lung/pathology ; Lung Injury/pathology ; Membrane Glycoproteins/genetics ; Membrane Glycoproteins/metabolism ; Mice ; Oligonucleotide Array Sequence Analysis ; Protein-Tyrosine Kinases/genetics ; Protein-Tyrosine Kinases/metabolism

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Skocz do pozycji: 29.

Tytuł:: Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development.
Autorzy:: Brisbin AG; Department of Health Sciences Research, Mayo Clinic, Rochester, USA.
Asmann YW
Song H
Tsai YY
Aakre JA
Yang P
Jenkins RB
Pharoah P
Schumacher F
Conti DV
Duggan DJ
Jenkins M
Hopper J
Gallinger S
Newcomb P
Casey G
Sellers TA
Fridley BL; Pokaż więcej
Źródło:: BMC medical genetics [BMC Med Genet] 2011 Dec 05; Vol. 12, pp. 156. Date of Electronic Publication: 2011 Dec 05.
Typ publikacji:: Journal Article; Meta-Analysis; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosomes, Human, Pair 8*
Genome-Wide Association Study*
Neoplasms/*genetics
Disease Progression ; Genetic Loci ; Humans ; Nephroblastoma Overexpressed Protein/genetics ; Phosphoric Diester Hydrolases/genetics ; Polymorphism, Single Nucleotide ; Proto-Oncogene Mas

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Skocz do pozycji: 30.

Tytuł:: Differential expression of microRNAs in tumors from chronically inflamed or genetic (APC(Min/+)) models of colon cancer.
Autorzy:: Necela BM; Department of Cancer Biology, Mayo Clinic Comprehensive Cancer Center, Jacksonville, Florida, United States of America.
Carr JM
Asmann YW
Thompson EA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2011 Apr 12; Vol. 6 (4), pp. e18501. Date of Electronic Publication: 2011 Apr 12.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Colitis, Ulcerative/*genetics
Colonic Neoplasms/*genetics
MicroRNAs/*genetics
Animals ; Chronic Disease ; Colonic Neoplasms/complications ; Female ; Genes, APC ; Humans ; Mice ; Mice, Inbred C57BL ; Reverse Transcriptase Polymerase Chain Reaction

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Skocz do pozycji: 31.

Tytuł:: Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing.
Autorzy:: Sun Z; Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America.
Asmann YW
Kalari KR
Bot B
Eckel-Passow JE
Baker TR
Carr JM
Khrebtukova I
Luo S
Zhang L
Schroth GP
Perez EA
Thompson EA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2011 Feb 25; Vol. 6 (2), pp. e17490. Date of Electronic Publication: 2011 Feb 25.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't; Validation Study
MeSH Terms:: CpG Islands*/genetics
DNA Methylation*/physiology
Gene Dosage*/physiology
High-Throughput Nucleotide Sequencing*/methods
Breast Neoplasms/*genetics
Carcinoma/*genetics
Breast Neoplasms/metabolism ; Breast Neoplasms/pathology ; Carcinoma/metabolism ; Carcinoma/pathology ; Cell Line, Tumor ; Cells, Cultured ; Cluster Analysis ; Female ; Gene Expression Profiling/methods ; Gene Expression Regulation, Neoplastic ; Humans ; Sequence Analysis, DNA/methods ; Systems Integration

Czasopismo naukowe

na półce

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Skocz do pozycji: 32.

Tytuł:: Changes in cardiac gene expression after pig-to-primate orthotopic xenotransplantation.
Autorzy:: Byrne GW; Department of Medicine, University College London, London, UK. />Du Z
Sun Z
Asmann YW
McGregor CG; Pokaż więcej
Źródło:: Xenotransplantation [Xenotransplantation] 2011 Jan-Feb; Vol. 18 (1), pp. 14-27.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: Gene Expression*
Heart/*physiology
Heart Transplantation/*methods
Transplantation, Heterologous/*methods
Animals ; Cluster Analysis ; Computational Biology ; Gene Expression Profiling ; Graft Rejection/pathology ; Humans ; Oligonucleotide Array Sequence Analysis ; Sus scrofa

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 33.

Tytuł:: c-Myc regulates self-renewal in bronchoalveolar stem cells.
Autorzy:: Dong J; Division of General Thoracic Surgery, Department of Surgery, Mayo Clinic, Rochester, Minnesota, United States of America.
Sutor S
Jiang G
Cao Y
Asmann YW
Wigle DA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2011; Vol. 6 (8), pp. e23707. Date of Electronic Publication: 2011 Aug 17.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Cell Proliferation*
Cell Differentiation/*genetics
Proto-Oncogene Proteins c-myc/*genetics
Stem Cells/*metabolism
Animals ; Cells, Cultured ; Embryonic Stem Cells/metabolism ; Female ; Gene Expression Profiling ; Gene Regulatory Networks/genetics ; Immunohistochemistry ; Male ; Mice ; Mice, Inbred ICR ; MicroRNAs/genetics ; Oligonucleotide Array Sequence Analysis ; Pluripotent Stem Cells/metabolism ; Pregnancy ; Proto-Oncogene Proteins c-myc/metabolism ; Pulmonary Alveoli/cytology ; Pulmonary Alveoli/metabolism ; RNA Interference ; RNA, Messenger/genetics ; Reverse Transcriptase Polymerase Chain Reaction ; Stem Cells/cytology ; Transcription Factors/genetics ; Transcription Factors/metabolism

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 34.

Tytuł:: Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL® platform.
Autorzy:: Reinholz MM; Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First St SW, Rochester, Minnesota 55905, USA. />Eckel-Passow JE
Anderson SK
Asmann YW
Zschunke MA
Oberg AL
McCullough AE
Dueck AC
Chen B
April CS
Wickham-Garcia E
Jenkins RB
Cunningham JM
Jen J
Perez EA
Fan JB
Lingle WL; Pokaż więcej
Źródło:: BMC medical genomics [BMC Med Genomics] 2010 Dec 20; Vol. 3, pp. 60. Date of Electronic Publication: 2010 Dec 20.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Profiling*
Breast Neoplasms/*genetics
Breast Neoplasms/*pathology
Female ; Gene Expression Regulation, Neoplastic ; Humans ; Mitochondria/genetics ; Paraffin Embedding ; Receptor, ErbB-2/genetics

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 35.

Tytuł:: Gene transcription changes in asthmatic chronic rhinosinusitis with nasal polyps and comparison to those in atopic dermatitis.
Autorzy:: Plager DA; Allergic Diseases Research Laboratory, Mayo Clinic, Rochester, Minnesota, United States of America. />Kahl JC
Asmann YW
Nilson AE
Pallanch JF
Friedman O
Kita H; Pokaż więcej
Źródło:: PloS one [PLoS One] 2010 Jul 06; Vol. 5 (7), pp. e11450. Date of Electronic Publication: 2010 Jul 06.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Asthma/*genetics
Dermatitis, Atopic/*genetics
Nasal Polyps/*metabolism
Nasal Polyps/*pathology
Rhinitis/*genetics
Sinusitis/*genetics
Transcription, Genetic/*genetics
Adolescent ; Adult ; Calcium-Binding Proteins ; Cell Adhesion Molecules ; Chemokine CCL11/genetics ; Chemokine CCL2/genetics ; Chemokine CCL22/genetics ; Chemokine CCL8/genetics ; Chemokines, CC/genetics ; Glycoproteins/genetics ; Humans ; Immunohistochemistry ; Interleukin-1 Receptor-Like 1 Protein ; Membrane Glycoproteins/genetics ; Middle Aged ; Monocyte Chemoattractant Proteins/genetics ; Mucins/genetics ; Radioimmunoprecipitation Assay ; Receptors, Cell Surface/genetics ; Receptors, G-Protein-Coupled/genetics ; Receptors, Peptide/genetics ; Reverse Transcriptase Polymerase Chain Reaction ; Salivary Proteins and Peptides/genetics ; Seminal Plasma Proteins/genetics ; Young Adult

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 36.

Tytuł:: MicroRNA networks in mouse lung organogenesis.
Autorzy:: Dong J; Division of General Thoracic Surgery, Mayo Clinic Cancer Center, Mayo Clinic, Rochester, Minnesota, USA.
Jiang G
Asmann YW
Tomaszek S
Jen J
Kislinger T
Wigle DA; Pokaż więcej
Źródło:: PloS one [PLoS One] 2010 May 26; Vol. 5 (5), pp. e10854. Date of Electronic Publication: 2010 May 26.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Regulatory Networks/*genetics
Lung/*embryology
Lung/*metabolism
MicroRNAs/*genetics
Organogenesis/*genetics
Animals ; Chromosomes, Mammalian/genetics ; Cluster Analysis ; Gene Expression Regulation, Developmental ; Genome/genetics ; Mice ; MicroRNAs/metabolism ; Principal Component Analysis ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Signal Transduction/genetics ; Time Factors

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 37.

Tytuł:: Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations.
Autorzy:: Tuch BB; Life Technologies Inc., Foster City, California, United States of America.
Laborde RR
Xu X
Gu J
Chung CB
Monighetti CK
Stanley SJ
Olsen KD
Kasperbauer JL
Moore EJ
Broomer AJ
Tan R
Brzoska PM
Muller MW
Siddiqui AS
Asmann YW
Sun Y
Kuersten S
Barker MA
De La Vega FM
Smith DI; Pokaż więcej
Źródło:: PloS one [PLoS One] 2010 Feb 19; Vol. 5 (2), pp. e9317. Date of Electronic Publication: 2010 Feb 19.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Profiling*
Carcinoma, Squamous Cell/*genetics
Mouth Neoplasms/*genetics
Sequence Analysis, DNA/*methods
Allelic Imbalance ; Cluster Analysis ; Gene Deletion ; Gene Dosage ; Gene Duplication ; Gene Expression Regulation, Neoplastic ; Genome-Wide Association Study/methods ; Humans ; Mutation ; Oligonucleotide Array Sequence Analysis ; Polymorphism, Single Nucleotide ; Reverse Transcriptase Polymerase Chain Reaction

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 38.

Tytuł:: 3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer.
Autorzy:: Asmann YW; Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.
Klee EW
Thompson EA
Perez EA
Middha S
Oberg AL
Therneau TM
Smith DI
Poland GA
Wieben ED
Kocher JP; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2009 Nov 16; Vol. 10, pp. 531. Date of Electronic Publication: 2009 Nov 16.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Brain/*metabolism
Gene Expression Profiling/*methods
Gene Expression Profiling/*standards
Genome, Human/*genetics
Genomics/*methods
Genomics/*standards
RNA/*genetics
Humans ; Oligonucleotide Array Sequence Analysis ; Polymerase Chain Reaction ; Reference Standards ; Reproducibility of Results ; Sequence Analysis, DNA ; Software ; Time Factors

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 39.

Tytuł:: Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines.
Autorzy:: Wang L; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA. />Oberg AL
Asmann YW
Sicotte H
McDonnell SK
Riska SM
Liu W
Steer CJ
Subramanian S
Cunningham JM
Cerhan JR
Thibodeau SN; Pokaż więcej
Źródło:: PloS one [PLoS One] 2009 Jun 11; Vol. 4 (6), pp. e5878. Date of Electronic Publication: 2009 Jun 11.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Gene Expression Profiling/*methods
Lymphocytes/*metabolism
MicroRNAs/*genetics
Adult ; Aged ; Cell Line ; Computational Biology/methods ; Gene Expression Regulation ; Genome-Wide Association Study ; Humans ; Male ; Middle Aged ; Oligonucleotide Array Sequence Analysis ; RNA, Messenger/metabolism ; Transcription, Genetic

Czasopismo naukowe

na półce

Pełny tekst Szczegóły

Skocz do pozycji: 40.

Tytuł:: GLOSSI: a method to assess the association of genetic loci-sets with complex diseases.
Autorzy:: Chai HS; Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, NY, USA. />Sicotte H
Bailey KR
Turner ST
Asmann YW
Kocher JP; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2009 Apr 03; Vol. 10, pp. 102. Date of Electronic Publication: 2009 Apr 03.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:: Software*
Disease/*genetics
Polymorphism, Single Nucleotide/*genetics
Algorithms ; Animals ; Computer Simulation ; Databases, Genetic ; Humans ; Phenotype

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