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Wyświetlanie 1-11 z 11
Tytuł:
The photosynthetic bacteria Rhodobacter capsulatus and Synechocystis sp. PCC 6803 as new hosts for cyclic plant triterpene biosynthesis.
Autorzy:
Loeschcke A; Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich, Jülich, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Dienst D; Institute for Synthetic Microbiology, Department of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Wewer V; MS Platform, Department of Biology, University of Cologne, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Hage-Hülsmann J; Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich, Jülich, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Dietsch M; Institute for Synthetic Microbiology, Department of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Kranz-Finger S; Institute of Biochemistry II, Department of Chemistry, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Hüren V; Institute for Synthetic Microbiology, Department of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Metzger S; MS Platform, Department of Biology, University of Cologne, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Urlacher VB; Institute of Biochemistry II, Department of Chemistry, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Gigolashvili T; Botanical Institute, University of Cologne, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Kopriva S; Botanical Institute, University of Cologne, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Axmann IM; Institute for Synthetic Microbiology, Department of Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Drepper T; Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich, Jülich, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).
Jaeger KE; Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich, Jülich, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS).; Institute of Bio- and Geosciences (IBG-1), Forschungszentrum Jülich, Jülich, Germany.
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Źródło:
PloS one [PLoS One] 2017 Dec 27; Vol. 12 (12), pp. e0189816. Date of Electronic Publication: 2017 Dec 27 (Print Publication: 2017).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Rhodobacter capsulatus/*metabolism
Synechocystis/*metabolism
Triterpenes/*metabolism
Cyclization ; Gene Expression Regulation, Bacterial
Czasopismo naukowe
Tytuł:
6S RNA plays a role in recovery from nitrogen depletion in Synechocystis sp. PCC 6803.
Autorzy:
Heilmann B; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225, Düsseldorf, Germany.; Department of Biotechnology, Beuth University of Applied Sciences, Seestr. 64, 13347, Berlin, Germany.
Hakkila K; Department of Biochemistry, University of Turku, FI-20014, Turku, Finland.
Georg J; Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104, Freiburg, Germany.
Tyystjärvi T; Department of Biochemistry, University of Turku, FI-20014, Turku, Finland.
Hess WR; Genetics and Experimental Bioinformatics, Faculty of Biology, University of Freiburg, Schänzlestr. 1, 79104, Freiburg, Germany.
Axmann IM; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225, Düsseldorf, Germany. ilka.axmann@hhu.de.
Dienst D; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, Universitätsstrasse 1, 40225, Düsseldorf, Germany.; Department of Chemistry - Microbial Chemistry, Ångström and Science for Life Laboratory, Uppsala University, Box 523, SE-751 20, Uppsala, Sweden.
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Źródło:
BMC microbiology [BMC Microbiol] 2017 Dec 08; Vol. 17 (1), pp. 229. Date of Electronic Publication: 2017 Dec 08.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation, Bacterial*
Acclimatization/*genetics
Nitrogen/*deficiency
RNA, Bacterial/*metabolism
RNA, Untranslated/*metabolism
Synechocystis/*genetics
Synechocystis/*metabolism
Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; DNA-Directed RNA Polymerases/metabolism ; Gene Expression Profiling ; Photosynthesis/genetics ; Phycobilisomes/genetics ; RNA, Bacterial/genetics ; RNA, Messenger/metabolism ; RNA, Untranslated/genetics ; Sigma Factor/metabolism ; Trans-Activators/genetics
Czasopismo naukowe
Tytuł:
Minimal tool set for a prokaryotic circadian clock.
Autorzy:
Schmelling NM; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Duesseldorf, Universitaetsstrasse 1, Duesseldorf, 40225, Germany.
Lehmann R; Institute for Theoretical Biology, Humboldt University Berlin, Invalidenstrasse 43, Berlin, 10115, Germany.
Chaudhury P; Molecular Biology of Archaea, Albert-Ludwigs-University Freiburg, Institute of Biology II, Schaenzlestrasse 1, Freiburg, 79104, Germany.
Beck C; Institute for Theoretical Biology, Humboldt University Berlin, Invalidenstrasse 43, Berlin, 10115, Germany.
Albers SV; Molecular Biology of Archaea, Albert-Ludwigs-University Freiburg, Institute of Biology II, Schaenzlestrasse 1, Freiburg, 79104, Germany.
Axmann IM; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Duesseldorf, Universitaetsstrasse 1, Duesseldorf, 40225, Germany. Ilka.Axmann@hhu.de.
Wiegard A; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Duesseldorf, Universitaetsstrasse 1, Duesseldorf, 40225, Germany.
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Źródło:
BMC evolutionary biology [BMC Evol Biol] 2017 Jul 21; Vol. 17 (1), pp. 169. Date of Electronic Publication: 2017 Jul 21.
Typ publikacji:
Journal Article
MeSH Terms:
Circadian Clocks/*genetics
Synechococcus/*genetics
Synechococcus/*physiology
Amino Acid Motifs ; Archaea/genetics ; Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Circadian Rhythm/genetics ; Circadian Rhythm Signaling Peptides and Proteins/chemistry ; Circadian Rhythm Signaling Peptides and Proteins/genetics ; Conserved Sequence ; Gene Expression Regulation, Bacterial ; Genes, Bacterial ; Phosphorylation ; Phylogeny ; Sequence Homology, Nucleic Acid ; Transcriptome/genetics
Czasopismo naukowe
Tytuł:
Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state.
Autorzy:
Snijder J; Biomolecular Mass Spectrometry and Proteomics and Netherlands Proteomics Center, Bijvoet Center for Biomolecular Research, and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH, Utrecht, Netherlands.
Schuller JM; Max Planck Institute of Biochemistry, Department of Molecular Structural Biology, D-82152 Martinsried, Germany.
Wiegard A; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, D-40225 Düsseldorf, Germany.
Lössl P; Biomolecular Mass Spectrometry and Proteomics and Netherlands Proteomics Center, Bijvoet Center for Biomolecular Research, and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH, Utrecht, Netherlands.
Schmelling N; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, D-40225 Düsseldorf, Germany.
Axmann IM; Institute for Synthetic Microbiology, Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University Düsseldorf, D-40225 Düsseldorf, Germany.
Plitzko JM; Max Planck Institute of Biochemistry, Department of Molecular Structural Biology, D-82152 Martinsried, Germany.
Förster F; Max Planck Institute of Biochemistry, Department of Molecular Structural Biology, D-82152 Martinsried, Germany. .; Cryo-electron Microscopy, Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH, Utrecht, Netherlands.
Heck AJ; Biomolecular Mass Spectrometry and Proteomics and Netherlands Proteomics Center, Bijvoet Center for Biomolecular Research, and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH, Utrecht, Netherlands. .
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Źródło:
Science (New York, N.Y.) [Science] 2017 Mar 17; Vol. 355 (6330), pp. 1181-1184. Date of Electronic Publication: 2017 Mar 16.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Circadian Clocks*
Circadian Rhythm*
Bacterial Proteins/*chemistry
Circadian Rhythm Signaling Peptides and Proteins/*chemistry
Cyanobacteria/*physiology
Adenosine Triphosphate/chemistry ; Bacterial Proteins/ultrastructure ; Circadian Rhythm Signaling Peptides and Proteins/ultrastructure ; Cryoelectron Microscopy ; Mass Spectrometry ; Models, Molecular ; Protein Multimerization
Czasopismo naukowe
Tytuł:
Revealing a two-loop transcriptional feedback mechanism in the cyanobacterial circadian clock.
Autorzy:
Hertel S; Institute for Theoretical Biology, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Brettschneider C
Axmann IM
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2013; Vol. 9 (3), pp. e1002966. Date of Electronic Publication: 2013 Mar 14.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Bacterial Proteins/*genetics
Bacterial Proteins/*metabolism
Circadian Clocks/*physiology
Circadian Rhythm Signaling Peptides and Proteins/*genetics
Circadian Rhythm Signaling Peptides and Proteins/*metabolism
Cyanobacteria/*genetics
Cyanobacteria/*metabolism
Circadian Clocks/genetics ; Computational Biology ; Computer Simulation ; Feedback, Physiological ; Gene Expression Regulation, Bacterial ; Models, Biological ; Mutation ; Phosphorylation ; Transcription, Genetic
Czasopismo naukowe
Tytuł:
The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms.
Autorzy:
Beck C; Institute for Theoretical Biology, Humboldt-University of Berlin, Invalidenstr, 43, D-10115 Berlin, Germany.
Knoop H
Axmann IM
Steuer R
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Źródło:
BMC genomics [BMC Genomics] 2012 Feb 02; Vol. 13, pp. 56. Date of Electronic Publication: 2012 Feb 02.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Cyanobacteria/*genetics
Cyanobacteria/*metabolism
Genetic Variation/*genetics
Genome, Bacterial/*genetics
Phototrophic Processes/*genetics
Adaptation, Physiological/genetics ; Codon/genetics ; Codon/metabolism ; Cyanobacteria/physiology ; Environment ; Evolution, Molecular ; Metabolic Networks and Pathways/genetics ; Multigene Family/genetics ; Phylogeny ; Sequence Homology, Nucleic Acid
Czasopismo naukowe
Tytuł:
Multi-target regulation by small RNAs synchronizes gene expression thresholds and may enhance ultrasensitive behavior.
Autorzy:
Schmiedel JM; Institute for Theoretical Biology, Charité-Universitätsmedizin, Berlin, Berlin, Germany.
Axmann IM
Legewie S
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Źródło:
PloS one [PLoS One] 2012; Vol. 7 (8), pp. e42296. Date of Electronic Publication: 2012 Aug 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Models, Genetic*
Gene Expression Regulation/*genetics
RNA, Untranslated/*genetics
Feedback, Physiological ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Transcription, Genetic/genetics
Czasopismo naukowe
Tytuł:
A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock.
Autorzy:
Brettschneider C; Institute for Theoretical Biology, Humboldt Universität zu Berlin, Berlin, Germany.
Rose RJ
Hertel S
Axmann IM
Heck AJ
Kollmann M
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Źródło:
Molecular systems biology [Mol Syst Biol] 2010 Jul 13; Vol. 6, pp. 389.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Circadian Rhythm/*physiology
Circadian Rhythm Signaling Peptides and Proteins/*metabolism
Synechococcus/*metabolism
Bacterial Proteins/chemistry ; Bacterial Proteins/metabolism ; Circadian Rhythm Signaling Peptides and Proteins/chemistry ; Computer Simulation ; Feedback, Physiological ; Kinetics ; Mass Spectrometry ; Models, Molecular ; Phosphorylation ; Reproducibility of Results ; Synechococcus/chemistry ; Systems Biology/methods ; Temperature
Czasopismo naukowe
Tytuł:
A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria.
Autorzy:
Voss B; University of Freiburg, Faculty of Biology, Experimental Bioinformatics, Schänzlestr, 1, D-79104 Freiburg, Germany. />Gierga G
Axmann IM
Hess WR
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Źródło:
BMC genomics [BMC Genomics] 2007 Oct 17; Vol. 8, pp. 375. Date of Electronic Publication: 2007 Oct 17.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Base Sequence*
Genome, Bacterial*
Sequence Homology*
Cyanobacteria/*genetics
MicroRNAs/*genetics
Cell Lineage ; MicroRNAs/isolation & purification ; Molecular Sequence Data ; Nucleic Acid Conformation ; Phylogeny ; RNA/chemistry ; RNA/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł:
Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution.
Autorzy:
Lindell D; Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Jaffe JD
Coleman ML
Futschik ME
Axmann IM
Rector T
Kettler G
Sullivan MB
Steen R
Hess WR
Church GM
Chisholm SW
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Źródło:
Nature [Nature] 2007 Sep 06; Vol. 449 (7158), pp. 83-6.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Evolution, Molecular*
Gene Expression Profiling*
Bacteriophages/*genetics
Genome, Bacterial/*genetics
Genome, Viral/*genetics
Prochlorococcus/*genetics
Prochlorococcus/*virology
Bacteriophages/physiology ; Gene Expression Regulation/genetics ; Genes, Bacterial/genetics ; Genes, Viral/genetics ; Host-Parasite Interactions ; Marine Biology ; Seawater/microbiology ; Seawater/virology ; Time Factors ; Transcription, Genetic/genetics
Czasopismo naukowe
    Wyświetlanie 1-11 z 11

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