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Wyszukujesz frazę ""BIOLOGY"" wg kryterium: Temat


Tytuł :
Ten simple rules for biologists initiating a collaboration with computer scientists.
Autorzy :
Cechova M; Central European Institute of Technology (CEITEC), Genetics and Reproductive Biotechnologies, Veterinary Research Institute, Brno, Czech Republic.
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Źródło :
PLoS computational biology [PLoS Comput Biol] 2020 Oct 22; Vol. 16 (10), pp. e1008281. Date of Electronic Publication: 2020 Oct 22 (Print Publication: 2020).
Typ publikacji :
Editorial; Research Support, Non-U.S. Gov't
MeSH Terms :
Computational Biology*/education
Computational Biology*/methods
Computational Biology*/organization & administration
Cooperative Behavior*
Biology/education ; Biology/organization & administration ; Communication ; Humans ; Informatics
Raport
Tytuł :
The 2021 Nucleic Acids Research database issue and the online molecular biology database collection.
Autorzy :
Rigden DJ; Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK.
Fernández XM; Institut Curie, 25 rue d'Ulm, 75005 Paris, France.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 08; Vol. 49 (D1), pp. D1-D9.
Typ publikacji :
Editorial; Introductory Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Databases, Nucleic Acid*
Nucleic Acids*
Molecular Biology/*statistics & numerical data
Periodicals as Topic/*statistics & numerical data
Research/*statistics & numerical data
SARS-CoV-2/*genetics
COVID-19/epidemiology ; COVID-19/prevention & control ; COVID-19/virology ; Computational Biology/methods ; Epidemics ; Genomics/methods ; Humans ; Internet ; Molecular Biology/methods ; Molecular Biology/standards ; Periodicals as Topic/standards ; Research/standards ; SARS-CoV-2/physiology
Czasopismo naukowe
Tytuł :
ViralLink: An integrated workflow to investigate the effect of SARS-CoV-2 on intracellular signalling and regulatory pathways.
Autorzy :
Treveil A; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
Bohar B; Earlham Institute, Norwich, United Kingdom.; Department of Genetics, Eotvos Lorand University, Budapest, Hungary.
Sudhakar P; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.; Department of Chronic Diseases, Metabolism and Ageing, Translational Research Center for Gastrointestinal Disorders, Katholieke Universiteit Leuven, Leuven, Belgium.
Gul L; Earlham Institute, Norwich, United Kingdom.
Csabai L; Earlham Institute, Norwich, United Kingdom.; Department of Genetics, Eotvos Lorand University, Budapest, Hungary.
Olbei M; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
Poletti M; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
Madgwick M; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
Andrighetti T; Earlham Institute, Norwich, United Kingdom.; Institute of Biosciences, São Paulo University, Botucatu, Brazil.
Hautefort I; Earlham Institute, Norwich, United Kingdom.
Modos D; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
Korcsmaros T; Earlham Institute, Norwich, United Kingdom.; Quadram Institute Bioscience, Norwich, United Kingdom.
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Źródło :
PLoS computational biology [PLoS Comput Biol] 2021 Feb 03; Vol. 17 (2), pp. e1008685. Date of Electronic Publication: 2021 Feb 03 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Viral*
Signal Transduction*
COVID-19/*metabolism
Computational Biology/*methods
SARS-CoV-2/*pathogenicity
Algorithms ; Bronchi/virology ; Cluster Analysis ; Gene Expression Profiling ; Host-Pathogen Interactions ; Humans ; Interdisciplinary Research ; Lung/virology ; Models, Statistical ; Systems Biology ; Transcriptome ; Workflow
Czasopismo naukowe
Tytuł :
Structural biology in the fight against COVID-19.
Autorzy :
Bárcena M; Leiden University Medical Center, Leiden, the Netherlands.
Barnes CO; California Institute of Technology, Pasadena, CA, USA.
Beck M; Max Planck Institute of Biophysics, Frankfurt am Main, Germany.
Bjorkman PJ; California Institute of Technology, Pasadena, CA, USA.
Canard B; Centre National de la Recherche Scientifique and Aix-Marseille University, Marseille, France.
Gao GF; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Gao Y; HARBOR, University of Hamburg, Hamburg, Germany.
Hilgenfeld R; Institute of Molecular Medicine, University of Lübeck, Lübeck, Germany.
Hummer G; Max Planck Institute of Biophysics, Frankfurt am Main, Germany.
Patwardhan A; European Molecular Biology Laboratory (EMBL-EBI) European Bioinformatics Institute, Hinxton, UK.
Santoni G; European Synchrotron Radiation Facility, Grenoble, France.
Saphire EO; Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology, La Jolla, CA, USA.
Schaffitzel C; School of Biochemistry and Bristol Synthetic Biology Centre (BrisSynBio), University of Bristol, Bristol, UK.
Schendel SL; Center for Infectious Disease and Vaccine Research, La Jolla Institute for Immunology, La Jolla, CA, USA.
Smith JL; Life Sciences Institute and Department of Biological Chemistry, University of Michigan, Ann Arbor, MI, USA.
Thorn A; HARBOR, University of Hamburg, Hamburg, Germany.
Veesler D; University of Washington, Seattle, WA, USA.
Zhang P; Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.; Diamond Light Source, Harwell Science and Innovation Campus, Didcot, UK.
Zhou Q; Center for Infectious Disease Research, Westlake Laboratory of Life Sciences and Biomedicine, Key Laboratory of Structural Biology of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, China.; Institute of Biology, Westlake Institute for Advanced Study, Hangzhou, China.
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Źródło :
Nature structural & molecular biology [Nat Struct Mol Biol] 2021 Jan; Vol. 28 (1), pp. 2-7.
Typ publikacji :
Wiadomości
MeSH Terms :
Molecular Biology/*methods
SARS-CoV-2/*chemistry
Viral Proteins/*chemistry
Computational Biology/methods ; Cryoelectron Microscopy/methods ; Databases, Protein ; Epitopes/chemistry ; Epitopes/immunology ; Host-Pathogen Interactions ; Humans ; Linoleic Acid/chemistry ; Linoleic Acid/metabolism ; Linoleic Acid/pharmacology ; SARS-CoV-2/genetics ; SARS-CoV-2/pathogenicity ; Spike Glycoprotein, Coronavirus/chemistry ; Spike Glycoprotein, Coronavirus/metabolism ; Viral Proteins/metabolism ; Viral Vaccines/immunology ; Viral Vaccines/pharmacology ; Virus Replication/physiology
Periodyk
Tytuł :
Reconciling qualitative, abstract, and scalable modeling of biological networks.
Autorzy :
Paulevé L; Université Bordeaux, Bordeaux INP, CNRS, LaBRI, UMR5800, 351 cours de la Libération, Talence, 33400, France. .; LRI UMR8623, Université Paris-Sud, CNRS, Université Paris-Saclay, Bat 650 Ada Lovelace, Rue Raimond Castaing, Gif-sur-Yvette, 91190, France. .
Kolčák J; Inria and LSV, CNRS (UMR 8643) and ENS Paris-Saclay, Université Paris-Saclay, 4 avenue des Sciences, Gif-sur-Yvette, 91190, France.
Chatain T; Inria and LSV, CNRS (UMR 8643) and ENS Paris-Saclay, Université Paris-Saclay, 4 avenue des Sciences, Gif-sur-Yvette, 91190, France.
Haar S; Inria and LSV, CNRS (UMR 8643) and ENS Paris-Saclay, Université Paris-Saclay, 4 avenue des Sciences, Gif-sur-Yvette, 91190, France.
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Źródło :
Nature communications [Nat Commun] 2020 Aug 26; Vol. 11 (1), pp. 4256. Date of Electronic Publication: 2020 Aug 26.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Validation Study
MeSH Terms :
Models, Biological*
Systems Biology*
Animals ; Computational Biology ; Gene Regulatory Networks ; Humans ; Logic ; Metabolic Networks and Pathways ; Models, Genetic
Czasopismo naukowe
Tytuł :
Systems and synthetic biology tools for advanced bioproduction hosts.
Autorzy :
Chen Y; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Agile BioFoundry, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Banerjee D; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Mukhopadhyay A; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Petzold CJ; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Agile BioFoundry, Lawrence Berkeley National Laboratory, Emeryville, CA, USA; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. Electronic address: .
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Źródło :
Current opinion in biotechnology [Curr Opin Biotechnol] 2020 Aug; Vol. 64, pp. 101-109. Date of Electronic Publication: 2020 Jan 08.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Review
MeSH Terms :
Biotechnology*
Synthetic Biology*
Biofuels ; Metabolic Engineering ; Systems Biology
Czasopismo naukowe
Tytuł :
The role of systems biology in developing non-model cyanobacteria as hosts for chemical production.
Autorzy :
Mukherjee B; Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.
Madhu S; Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.
Wangikar PP; Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; DBT-Pan IIT Center for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India. Electronic address: .
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Źródło :
Current opinion in biotechnology [Curr Opin Biotechnol] 2020 Aug; Vol. 64, pp. 62-69. Date of Electronic Publication: 2019 Nov 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
Cyanobacteria*/genetics
Systems Biology*
Metabolic Engineering ; Photosynthesis ; Synthetic Biology
Czasopismo naukowe
Tytuł :
Network inference in systems biology: recent developments, challenges, and applications.
Autorzy :
Saint-Antoine MM; Center for Bioinformatics and Computational Biology, University of Delaware, Newark, Delaware 19716, USA.
Singh A; Electrical and Computer Engineering, University of Delaware, Newark, Delaware 19716, USA. Electronic address: .
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Źródło :
Current opinion in biotechnology [Curr Opin Biotechnol] 2020 Jun; Vol. 63, pp. 89-98. Date of Electronic Publication: 2020 Jan 09.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Review
MeSH Terms :
Gene Regulatory Networks*
Systems Biology*
Algorithms ; Computational Biology ; Software
Czasopismo naukowe
Tytuł :
Rapid and robust assembly and decoding of molecular tags with DNA-based nanopore signatures.
Autorzy :
Doroschak K; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.
Zhang K; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.
Queen M; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.
Mandyam A; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.
Strauss K; Microsoft Research, Redmond, WA, 98052, USA.
Ceze L; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.
Nivala J; Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA. .
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Źródło :
Nature communications [Nat Commun] 2020 Nov 03; Vol. 11 (1), pp. 5454. Date of Electronic Publication: 2020 Nov 03.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Nanopores*
DNA/*genetics
Synthetic Biology/*methods
Algorithms ; Computational Biology ; Computer Systems ; Electronic Data Processing ; Machine Learning ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
The 27th annual Nucleic Acids Research database issue and molecular biology database collection.
Autorzy :
Rigden DJ; Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK.
Fernández XM; Institut Curie, 25 rue d'Ulm, 75005 Paris, France.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Jan 08; Vol. 48 (D1), pp. D1-D8.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
Databases, Genetic*/trends
Molecular Biology*/methods
Molecular Biology*/trends
Computational Biology ; Data Management ; Genomics ; Humans ; Web Browser
Czasopismo naukowe
Tytuł :
The International Conference on Intelligent Biology and Medicine 2019: computational methods for drug interactions.
Autorzy :
Ning X; Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH, 43210, USA. .
Zhang C; Department of Medical & Molecular Genetics, School of Medicine, Indiana University, Indianapolis, Indiana, 46202, USA.
Wang K; Raymond G. Perelman Center for Cellular and Molecular Therapeutics, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA.
Zhao Z; Center for Precision Health, School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.; Human Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Mathé E; Department of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, OH, 43210, USA. .
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Źródło :
BMC medical informatics and decision making [BMC Med Inform Decis Mak] 2020 Mar 18; Vol. 20 (Suppl 2), pp. 51. Date of Electronic Publication: 2020 Mar 18.
Typ publikacji :
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Biological Products*
Computational Biology*
Drug Interactions*
Biology ; Congresses as Topic ; Humans ; Medicine
Czasopismo naukowe
Tytuł :
EasyModel: user-friendly tool for building and analysis of simple mathematical models in systems biology.
Autorzy :
Bartolome J; Department of Computer Science and INSPIRES, Universitat de Lleida, Lleida 25001, Spain.
Alves R; Department of Basic Medical Sciences and IRBLleida, Universitat de Lleida, Lleida 25198, Spain.
Solsona F; Department of Computer Science and INSPIRES, Universitat de Lleida, Lleida 25001, Spain.
Teixido I; Department of Computer Science and INSPIRES, Universitat de Lleida, Lleida 25001, Spain.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Feb 01; Vol. 36 (3), pp. 976-977.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Software*
Systems Biology*
Computational Biology ; Databases, Factual ; Humans ; Internet ; Models, Biological
Czasopismo naukowe
Tytuł :
LINCS Data Portal 2.0: next generation access point for perturbation-response signatures.
Autorzy :
Stathias V; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.; Center for Computational Science, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.
Turner J; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.
Koleti A; Center for Computational Science, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.
Vidovic D; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.
Cooper D; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.
Fazel-Najafabadi M; BD2K-LINCS Data Coordination and Integration Center, USA.; Laboratory for Statistical Genomics and Systems Biology, Division of Biostatistics and Bioinformatics, Department of Environmental Health, University of Cincinnati College of Medicine, USA.
Pilarczyk M; BD2K-LINCS Data Coordination and Integration Center, USA.; Laboratory for Statistical Genomics and Systems Biology, Division of Biostatistics and Bioinformatics, Department of Environmental Health, University of Cincinnati College of Medicine, USA.
Terryn R; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.
Chung C; BD2K-LINCS Data Coordination and Integration Center, USA.; Sylvester Comprehensive Cancer Center, Miller School of Medicine, University of Miami, USA.
Umeano A; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.
Clarke DJB; BD2K-LINCS Data Coordination and Integration Center, USA.; Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York, USA.
Lachmann A; BD2K-LINCS Data Coordination and Integration Center, USA.; Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York, USA.
Evangelista JE; BD2K-LINCS Data Coordination and Integration Center, USA.; Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York, USA.
Ma'ayan A; BD2K-LINCS Data Coordination and Integration Center, USA.; Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York, USA.
Medvedovic M; BD2K-LINCS Data Coordination and Integration Center, USA.; Laboratory for Statistical Genomics and Systems Biology, Division of Biostatistics and Bioinformatics, Department of Environmental Health, University of Cincinnati College of Medicine, USA.
Schürer SC; Department of Molecular and Cellular Pharmacology, Miller School of Medicine, University of Miami, USA.; Center for Computational Science, University of Miami, USA.; BD2K-LINCS Data Coordination and Integration Center, USA.; Sylvester Comprehensive Cancer Center, Miller School of Medicine, University of Miami, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Jan 08; Vol. 48 (D1), pp. D431-D439.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Cell Biology*
Databases, Factual*
Clinical Trials as Topic ; Computational Biology ; Data Curation ; Humans ; Information Storage and Retrieval ; Metadata ; National Institutes of Health (U.S.) ; United States ; User-Computer Interface
Czasopismo naukowe
Tytuł :
Determination of scoring functions for protein damage susceptibility.
Autorzy :
Fichtner M; Matthias Schleiden Institute, Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany. Electronic address: .
Schuster S; Matthias Schleiden Institute, Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany.
Stark H; Matthias Schleiden Institute, Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany; Institute of Zoology and Evolutionary Research, Friedrich Schiller University Jena, Erbertstraße 1, 07743 Jena, Germany.
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Źródło :
Bio Systems [Biosystems] 2020 Jan; Vol. 187, pp. 104035. Date of Electronic Publication: 2019 Oct 12.
Typ publikacji :
Journal Article
MeSH Terms :
Computational Biology*
Protein Conformation*
Amino Acids/*chemistry
Aging/physiology ; Amino Acids/physiology ; Data Mining ; Halogenation ; Humans ; Hydroxylation ; Models, Biological ; Systems Biology
Czasopismo naukowe
Tytuł :
Assessing the Anti-cancer Therapeutic Mechanism of a Herbal Combination for Breast Cancer on System-level by a Network Pharmacological Approach.
Autorzy :
Lee HS; The Herbal Medicine Research Division, Korea Institute of Oriental Medicine, Daejeon, Republic of Korea.
Oh DS; The Herbal Medicine Research Division, Korea Institute of Oriental Medicine, Daejeon, Republic of Korea .
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Źródło :
Anticancer research [Anticancer Res] 2020 Sep; Vol. 40 (9), pp. 5097-5106.
Typ publikacji :
Journal Article
MeSH Terms :
Neural Networks, Computer*
Antineoplastic Agents, Phytogenic/*pharmacology
Drugs, Chinese Herbal/*pharmacology
Systems Biology/*methods
Technology, Pharmaceutical/*methods
Antineoplastic Agents, Phytogenic/chemistry ; Astragalus propinquus ; Breast Neoplasms ; Cell Line, Tumor ; Computational Biology/methods ; Drug Screening Assays, Antitumor ; Drugs, Chinese Herbal/chemistry ; Female ; Humans ; Medicine, Chinese Traditional ; Workflow
Czasopismo naukowe
Tytuł :
A Geometric Clustering Tool (AGCT) to robustly unravel the inner cluster structures of time-series gene expressions.
Autorzy :
Nock R; NICTA/Data61 & the Australian National University, Alexandria, Australia.
Polouliakh N; Sony Computer Science Laboratories Inc., Tokyo, Japan.; Department of Ophthalmology and Visual Science, Yokohama City University, Yokohama, Japan.; Systems Biology Institute, Tokyo, Japan.
Nielsen F; Sony Computer Science Laboratories Inc., Tokyo, Japan.
Oka K; The University of Tokyo, Tokyo, Japan.
Connell CR; Department of Computer Science, Queensland University of Technology, Brisbane, Australia.
Heimhofer C; Department of Computer Science, ETH Zurich, Zurich, Switzerland.
Shibanai K; Department of Computer Science, School of Computing, Tokyo Institute of Technology, Tokyo, Japan.
Ghosh S; Systems Biology Institute, Tokyo, Japan.
Aisaki KI; National Institute of Health Science, Kawasaki, Japan.
Kitajima S; National Institute of Health Science, Kawasaki, Japan.
Kanno J; Japan Bioassay Research Center, Japan Organization of Occupational Health and Safety, Hadano, Japan.
Akama T; Sony Computer Science Laboratories Inc., Tokyo, Japan.
Kitano H; Sony Computer Science Laboratories Inc., Tokyo, Japan.; Systems Biology Institute, Tokyo, Japan.
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Źródło :
PloS one [PLoS One] 2020 Jul 06; Vol. 15 (7), pp. e0233755. Date of Electronic Publication: 2020 Jul 06 (Print Publication: 2020).
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression*
Software*
Wavelet Analysis*
Systems Biology/*methods
Algorithms ; Animals ; Cell Cycle/genetics ; Computational Biology/methods ; Datasets as Topic ; Gene Expression Regulation/drug effects ; Liver/drug effects ; Liver/metabolism ; Markov Chains ; Mice ; Pentachlorophenol/pharmacology ; Pentachlorophenol/poisoning ; Random Allocation ; Saccharomyces cerevisiae/cytology ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism ; Systems Biology/statistics & numerical data
Czasopismo naukowe
Tytuł :
CleanBSequences: an efficient curator of biological sequences in R.
Autorzy :
Pozzi FI; Instituto de Tecnología Agropecuaria, EEA Marcos Juárez, Ruta 12 km. 3, 2580, Marcos Juárez, Córdoba, Argentina. .; Cátedra de Microbiología, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Santa Fe, Argentina. .
Green GY; Cátedra de Epidemiología, Facultad de Ciencias Veterinarias, Universidad Nacional de Rosario, S2170, Casilda, Santa Fe, Argentina.
Barbona IG; Cátedra de Estadística, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Santa Fe, Argentina.
Rodríguez GR; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) (CONICET-UNR), Zavalla, Argentina.; Cátedra de Genética, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, S2125ZAA, Zavalla, Santa Fe, Argentina.
Felitti SA; Instituto de Investigaciones en Ciencias Agrarias de Rosario (IICAR) (CONICET-UNR), Zavalla, Argentina.
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Źródło :
Molecular genetics and genomics : MGG [Mol Genet Genomics] 2020 Jul; Vol. 295 (4), pp. 837-841. Date of Electronic Publication: 2020 Apr 16.
Typ publikacji :
Journal Article
MeSH Terms :
Computational Biology*
Software*
Genetic Markers/*genetics
Molecular Biology/*methods
Epigenomics/methods ; Genomics/methods ; Molecular Sequence Annotation/methods ; Sequence Alignment/methods ; Sequence Analysis/methods ; Transcriptome/genetics
Czasopismo naukowe
Tytuł :
Seven technologies to watch in 2021.
Autorzy :
Landhuis E
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Źródło :
Nature [Nature] 2021 Jan; Vol. 589 (7843), pp. 630-632.
Typ publikacji :
Journal Article
MeSH Terms :
COVID-19 Vaccines*/chemistry
COVID-19 Vaccines*/immunology
COVID-19 Vaccines*/supply & distribution
Cell Biology*/instrumentation
Cell Biology*/trends
Developmental Biology*/methods
Developmental Biology*/trends
Electronic Nose*
Neurosciences*/methods
Neurosciences*/trends
Antibodies/*therapeutic use
Mass Spectrometry/*instrumentation
Animals ; Antibodies/chemistry ; Antibodies/genetics ; Antibodies/immunology ; Bacterial Proteins/drug effects ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Bacterial Proteins/radiation effects ; Bioprinting/trends ; COVID-19/epidemiology ; COVID-19/immunology ; COVID-19/prevention & control ; Embryo, Mammalian/cytology ; Embryo, Mammalian/embryology ; Embryo, Mammalian/metabolism ; Embryonic Development/genetics ; Holography/trends ; Humans ; Immunoglobulin E/chemistry ; Immunoglobulin E/genetics ; Immunoglobulin E/immunology ; Immunoglobulin E/therapeutic use ; Ion Channels/metabolism ; Mass Spectrometry/methods ; Membrane Proteins/drug effects ; Membrane Proteins/genetics ; Membrane Proteins/metabolism ; Membrane Proteins/radiation effects ; Mice ; Microscopy/instrumentation ; Microscopy/trends ; Molecular Probes/analysis ; Neoplasms/drug therapy ; Optogenetics/trends ; Single-Cell Analysis ; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
Czasopismo naukowe
Tytuł :
Bioinformatics Methods in Medical Genetics and Genomics.
Autorzy :
Orlov YL; The Digital Health Institute, I.M. Sechenov First Moscow State Medical University of the Ministry of Health of the Russian Federation (Sechenov University), 119991 Moscow, Russia.; Life Sciences Department, Novosibirsk State University, 630090 Novosibirsk, Russia.; Institute of Cytology and Genetics SB RAS, 630090 Novosibirsk, Russia.
Baranova AV; School of Systems Biology, George Mason University, Fairfax, VA 22030, USA.; Research Centre for Medical Genetics, 115522 Moscow, Russia.
Tatarinova TV; La Verne University, La Verne, CA 91750, USA.; Department of Fundamental Biology and Biotechnology, Siberian Federal University, 660074 Krasnoyarsk, Russia.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2020 Aug 28; Vol. 21 (17). Date of Electronic Publication: 2020 Aug 28.
Typ publikacji :
Editorial; Introductory Journal Article
MeSH Terms :
Computational Biology/*methods
Genetics, Medical/*methods
Algorithms ; Data Mining ; High-Throughput Nucleotide Sequencing ; Humans ; Systems Biology
Czasopismo naukowe
Tytuł :
The International Conference on Intelligent Biology and Medicine 2019 (ICIBM 2019): conference summary and innovations in genomics.
Autorzy :
Mathé E; Department of Biomedical Informatics, The Ohio State University, Columbus, 43210, USA. .
Zhang C; Department of Medical & Molecular Genetics, School of Medicine, Indiana University, Indianapolis, Indiana, 46202, USA.
Wang K; Raymond G. Perelman Center for Cellular and Molecular Therapeutics, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA.
Ning X; Department of Biomedical Informatics, The Ohio State University, Columbus, 43210, USA.
Guo Y; Department of Internal Medicine, Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM, 87131, USA.
Zhao Z; Center for Precision Health, School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. .; Human Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. .
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Źródło :
BMC genomics [BMC Genomics] 2019 Dec 30; Vol. 20 (Suppl 12), pp. 1005. Date of Electronic Publication: 2019 Dec 30.
Typ publikacji :
Congress; Editorial; Introductory Journal Article
MeSH Terms :
Genomics*/methods
Genomics*/trends
Systems Biology*/organization & administration
Systems Biology*/trends
Computational Biology ; Databases, Factual ; Gene Regulatory Networks/genetics ; High-Throughput Nucleotide Sequencing ; Humans ; Internationality
Czasopismo naukowe

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