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Tytuł:
Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces.
Autorzy:
Wang Y; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Yang X; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Yu F; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Deng Z; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Lin S; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.
Zheng J; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.; Joint International Research Laboratory of Metabolic & Developmental Sciences, Shanghai Jiao Tong University, Shanghai, China.
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Źródło:
PLoS biology [PLoS Biol] 2024 Mar 01; Vol. 22 (3), pp. e3002528. Date of Electronic Publication: 2024 Mar 01 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
DNA-Binding Proteins*/genetics
DNA-Binding Proteins*/metabolism
Streptomyces*/genetics
Streptomyces*/metabolism
Cryoelectron Microscopy ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Transcriptional Activation ; Anti-Bacterial Agents ; Adenosine Triphosphate/metabolism ; Bacterial Proteins/metabolism ; Gene Expression Regulation, Bacterial
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Phosphate starvation decouples cell differentiation from DNA replication control in the dimorphic bacterium Caulobacter crescentus.
Autorzy:
Hallgren J; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Koonce K; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Felletti M; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Mortier J; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Turco E; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
Jonas K; Science for Life Laboratory and Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden.
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Źródło:
PLoS genetics [PLoS Genet] 2023 Nov 27; Vol. 19 (11), pp. e1010882. Date of Electronic Publication: 2023 Nov 27 (Print Publication: 2023).
Typ publikacji:
Journal Article
MeSH Terms:
DNA-Binding Proteins*/genetics
Caulobacter crescentus*/genetics
Caulobacter crescentus*/metabolism
Phosphates/metabolism ; Guanosine Pentaphosphate/metabolism ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; DNA Replication/genetics ; Cell Cycle/genetics ; Cell Differentiation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
VirB, a transcriptional activator of virulence in Shigella flexneri, uses CTP as a cofactor.
Autorzy:
Antar H; Department of Fundamental Microbiology (DMF), Faculty of Biology and Medicine (FBM), University of Lausanne, 1015, Lausanne, Switzerland.
Gruber S; Department of Fundamental Microbiology (DMF), Faculty of Biology and Medicine (FBM), University of Lausanne, 1015, Lausanne, Switzerland. .
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Źródło:
Communications biology [Commun Biol] 2023 Nov 25; Vol. 6 (1), pp. 1204. Date of Electronic Publication: 2023 Nov 25.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Shigella flexneri*/genetics
DNA-Binding Proteins*/genetics
DNA-Binding Proteins*/metabolism
Virulence/genetics ; Virulence Factors/genetics ; Promoter Regions, Genetic ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Transcription Factors/genetics ; Transcription Factors/metabolism ; DNA/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity.
Autorzy:
Rajapaksha N; Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803, USA.
Soldano A; Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803, USA.
Yao H; Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803, USA.
Donnarumma F; Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803, USA.
Kashipathy MM; Protein Structure and X-ray Crystallography Laboratory, University of Kansas, 2034 Becker Dr., Lawrence, KS 66047, USA.
Seibold S; Protein Structure and X-ray Crystallography Laboratory, University of Kansas, 2034 Becker Dr., Lawrence, KS 66047, USA.
Battaile KP; NYX, New York Structural Biology Center, Upton, NY 11973, USA.
Lovell S; Protein Structure and X-ray Crystallography Laboratory, University of Kansas, 2034 Becker Dr., Lawrence, KS 66047, USA.
Rivera M; Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Feb 28; Vol. 24 (5). Date of Electronic Publication: 2023 Feb 28.
Typ publikacji:
Journal Article
MeSH Terms:
Bacterial Proteins*/metabolism
DNA Cleavage*
Hydrogen Peroxide*/metabolism
Oxidative Stress*
Pseudomonas aeruginosa*/genetics
Pseudomonas aeruginosa*/metabolism
DNA-Binding Proteins*/metabolism
Cations, Divalent ; DNA/metabolism ; Iron/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Bacillus subtilis RadA/Sms-Mediated Nascent Lagging-Strand Unwinding at Stalled or Reversed Forks Is a Two-Step Process: RadA/Sms Assists RecA Nucleation, and RecA Loads RadA/Sms.
Autorzy:
Torres R; Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CNB-CSIC, 28049 Madrid, Spain.
Carrasco B; Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CNB-CSIC, 28049 Madrid, Spain.
Alonso JC; Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CNB-CSIC, 28049 Madrid, Spain.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Feb 25; Vol. 24 (5). Date of Electronic Publication: 2023 Feb 25.
Typ publikacji:
Journal Article
MeSH Terms:
DNA Replication*
DNA-Binding Proteins*/metabolism
Bacillus subtilis/genetics ; Bacterial Proteins/metabolism ; Rec A Recombinases/metabolism ; DNA, Single-Stranded/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Structural insight into DNA recognition by bacterial transcriptional regulators of the SorC/DeoR family.
Autorzy:
Šoltysová M; Structural Biology, Institute of Organic Chemistry and Biochemistry of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
Sieglová I; Structural Biology, Institute of Organic Chemistry and Biochemistry of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
Fábry M; Institute of Molecular Genetics of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
Brynda J; Structural Biology, Institute of Organic Chemistry and Biochemistry of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
Škerlová J; Structural Biology, Institute of Organic Chemistry and Biochemistry of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
Řezáčová P; Structural Biology, Institute of Organic Chemistry and Biochemistry of Czech Academy of Sciences, Flemingovo nám. 2, 166 10 Prague, Czech Republic.
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Źródło:
Acta crystallographica. Section D, Structural biology [Acta Crystallogr D Struct Biol] 2021 Nov 01; Vol. 77 (Pt 11), pp. 1411-1424. Date of Electronic Publication: 2021 Oct 20.
Typ publikacji:
Journal Article
MeSH Terms:
Bacillus subtilis/*metabolism
Bacterial Proteins/*metabolism
DNA-Binding Proteins/*metabolism
Bacillus subtilis/chemistry ; Bacterial Proteins/chemistry ; Binding Sites ; Crystallography, X-Ray ; DNA/metabolism ; DNA-Binding Proteins/chemistry ; Models, Molecular ; Protein Binding ; Protein Conformation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
The protein scaffold calibrates metal specificity and activation in MerR sensors.
Autorzy:
Mendoza JI; Instituto de Biología Molecular y Celular de Rosario (IBR), Universidad Nacional de Rosario (UNR)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Rosario, Argentina.
Lescano J; Instituto de Biología Molecular y Celular de Rosario (IBR), Universidad Nacional de Rosario (UNR)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Rosario, Argentina.
Soncini FC; Instituto de Biología Molecular y Celular de Rosario (IBR), Universidad Nacional de Rosario (UNR)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Rosario, Argentina.; Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Rosario, Argentina.
Checa SK; Instituto de Biología Molecular y Celular de Rosario (IBR), Universidad Nacional de Rosario (UNR)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Rosario, Argentina.; Departamento de Microbiología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, Rosario, Argentina.
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Źródło:
Microbial biotechnology [Microb Biotechnol] 2022 Dec; Vol. 15 (12), pp. 2992-3002. Date of Electronic Publication: 2022 Sep 22.
Typ publikacji:
Journal Article
MeSH Terms:
DNA-Binding Proteins*/chemistry
DNA-Binding Proteins*/genetics
DNA-Binding Proteins*/metabolism
Mercury*/metabolism
Bacterial Proteins/metabolism ; Metals/metabolism ; Promoter Regions, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Development of a bioavailable Hg(II) sensing system based on MerR-regulated visual pigment biosynthesis.
Autorzy:
Guo Y; National Key Clinical Specialty of Occupational Diseases, Shenzhen Prevention and Treatment Center for Occupational Diseases, Shenzhen, China.
Hui CY; Department of Pathology and Toxicology, Shenzhen Prevention and Treatment Center for Occupational Diseases, Shenzhen, China. hcy_.
Liu L; Lewis Katz School of Medicine, Temple University, Philadelphia, PA, USA.
Chen MP; National Key Clinical Specialty of Occupational Diseases, Shenzhen Prevention and Treatment Center for Occupational Diseases, Shenzhen, China.
Huang HY; National Key Clinical Specialty of Occupational Diseases, Shenzhen Prevention and Treatment Center for Occupational Diseases, Shenzhen, China.
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Źródło:
Scientific reports [Sci Rep] 2021 Jun 29; Vol. 11 (1), pp. 13516. Date of Electronic Publication: 2021 Jun 29.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Bacterial Proteins*/genetics
Bacterial Proteins*/metabolism
Biosensing Techniques*
DNA-Binding Proteins*/genetics
DNA-Binding Proteins*/metabolism
Escherichia coli*/genetics
Escherichia coli*/metabolism
Green Fluorescent Proteins*/biosynthesis
Green Fluorescent Proteins*/genetics
Microorganisms, Genetically-Modified*/genetics
Microorganisms, Genetically-Modified*/metabolism
Mercury/*analysis
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Fluorescence Spectroscopic Analysis of ppGpp Binding to cAMP Receptor Protein and Histone-Like Nucleoid Structuring Protein.
Autorzy:
Duysak T; Department of Molecular Medicine, Chonnam National University, Gwangju 61186, Korea.
Tran TT; Department of Molecular Medicine, Chonnam National University, Gwangju 61186, Korea.
Afzal AR; Department of Medical Science, Chonnam National University, Gwangju 61186, Korea.
Jung CH; Department of Molecular Medicine, Chonnam National University, Gwangju 61186, Korea.; Department of Medical Science, Chonnam National University, Gwangju 61186, Korea.; Department of Chemistry, Chonnam National University, Gwangju 61186, Korea.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2021 Jul 23; Vol. 22 (15). Date of Electronic Publication: 2021 Jul 23.
Typ publikacji:
Journal Article
MeSH Terms:
Bacterial Proteins/*metabolism
Cyclic AMP Receptor Protein/*metabolism
DNA-Binding Proteins/*metabolism
Guanosine Tetraphosphate/*metabolism
Bacterial Proteins/chemistry ; Binding Sites ; Cyclic AMP/metabolism ; Cyclic AMP Receptor Protein/chemistry ; DNA-Binding Proteins/chemistry ; Escherichia coli ; Spectrometry, Fluorescence
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Putative Cooperative ATP-DnaA Binding to Double-Stranded DnaA Box and Single-Stranded DnaA-Trio Motif upon Helicobacter pylori Replication Initiation Complex Assembly.
Autorzy:
Jaworski P; Department of Microbiology, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.
Zyla-Uklejewicz D; Department of Microbiology, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.
Nowaczyk-Cieszewska M; Department of Microbiology, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.
Donczew R; Department of Microbiology, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.
Mielke T; Microscopy and Cryo-Electron Microscopy Service Group, Max Planck Institute for Molecular Genetics, Ihnestrasse 63-73, 14195 Berlin, Germany.
Weigel C; Institute of Biotechnology, Faculty III, Technische Universität Berlin (TUB), Straße des 17. Juni 135, 10623 Berlin, Germany.
Zawilak-Pawlik A; Department of Microbiology, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114 Wrocław, Poland.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2021 Jun 21; Vol. 22 (12). Date of Electronic Publication: 2021 Jun 21.
Typ publikacji:
Journal Article
MeSH Terms:
Origin Recognition Complex*
Bacterial Proteins/*metabolism
DNA-Binding Proteins/*metabolism
Helicobacter pylori/*metabolism
Adenosine Triphosphate/metabolism ; Bacterial Proteins/genetics ; DNA-Binding Proteins/genetics ; Helicobacter pylori/genetics ; Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Repressor Activity of SqrR, a Master Regulator of Persulfide-Responsive Genes, Is Regulated by Heme Coordination.
Autorzy:
Shimizu T; Department of Life Science and Technology, Tokyo Institute of Technology, Kanagawa, Japan.; Earth-Life Science Institute, Tokyo Institute of Technology, Tokyo, Japan.; Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Hayashi Y; Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Arai M; Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.; Department of Physics, The University of Tokyo, Tokyo, Japan.
McGlynn SE; Earth-Life Science Institute, Tokyo Institute of Technology, Tokyo, Japan.
Masuda T; Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan.
Masuda S; Department of Life Science and Technology, Tokyo Institute of Technology, Kanagawa, Japan.; Earth-Life Science Institute, Tokyo Institute of Technology, Tokyo, Japan.
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Źródło:
Plant & cell physiology [Plant Cell Physiol] 2021 Mar 25; Vol. 62 (1), pp. 100-110.
Typ publikacji:
Journal Article
MeSH Terms:
Genes, Bacterial*
Bacterial Proteins/*metabolism
DNA-Binding Proteins/*metabolism
Repressor Proteins/*metabolism
Rhodobacter capsulatus/*metabolism
Sulfides/*metabolism
Bacterial Proteins/genetics ; Bacterial Proteins/physiology ; DNA-Binding Proteins/genetics ; DNA-Binding Proteins/physiology ; Escherichia coli ; Gene Expression Regulation, Bacterial ; Microorganisms, Genetically-Modified ; Repressor Proteins/genetics ; Repressor Proteins/physiology ; Rhodobacter capsulatus/genetics ; Rhodobacter capsulatus/physiology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Sequence, structure, and function of the Dps DNA-binding protein from Deinococcus wulumuqiensis R12.
Autorzy:
Chen Y; College of Food Science and Light Industry, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211816, China.; College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Yang Z; College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Zhou X; College of Food Science and Light Industry, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Jin M; College of Food Science and Light Industry, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Dai Z; College of Food Science and Light Industry, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Ming D; College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, China.
Zhang Z; College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, China. .; Institute of Applied Microbiology, Xinjiang Academy of Agricultural Sciences/Xinjiang Key Laboratory of Special Environmental Microbiology, Ürümqi, 830091, Xinjiang, China. .
Zhu L; School of Chemistry and Molecular Engineering, Nanjing Tech University, Nanjing, 211816, China. .
Jiang L; College of Food Science and Light Industry, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211816, China. .
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Źródło:
Microbial cell factories [Microb Cell Fact] 2022 Jul 02; Vol. 21 (1), pp. 132. Date of Electronic Publication: 2022 Jul 02.
Typ publikacji:
Journal Article
MeSH Terms:
DNA-Binding Proteins*/genetics
DNA-Binding Proteins*/metabolism
Hydrogen Peroxide*
Bacterial Proteins/metabolism ; DNA ; Deinococcus
SCR Organism:
Deinococcus wulumuqiensis
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Structure and kinase activity of bacterial cell cycle regulator CcrZ.
Autorzy:
Wozniak KJ; Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, United States of America.
Burby PE; Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, United States of America.
Nandakumar J; Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, United States of America.
Simmons LA; Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2022 May 16; Vol. 18 (5), pp. e1010196. Date of Electronic Publication: 2022 May 16 (Print Publication: 2022).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
DNA-Binding Proteins*/genetics
Ribose*/metabolism
Bacillus subtilis/genetics ; Bacillus subtilis/metabolism ; Bacterial Proteins/metabolism ; Cell Cycle/genetics ; Choline/metabolism ; DNA Replication/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Revealing biophysical properties of KfrA-type proteins as a novel class of cytoskeletal, coiled-coil plasmid-encoded proteins.
Autorzy:
Adamczyk M; Warsaw University of Technology, Faculty of Chemistry, Chair of Drug and Cosmetics Biotechnology, Noakowskiego 3, 00-664, Warsaw, Poland. .
Lewicka E; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics PAS, Pawinskiego 5a, 02-106, Warsaw, Poland.
Szatkowska R; Warsaw University of Technology, Faculty of Chemistry, Chair of Drug and Cosmetics Biotechnology, Noakowskiego 3, 00-664, Warsaw, Poland.
Nieznanska H; Nencki Institute of Experimental Biology PAS, Laboratory of Electron Microscopy, Pasteura 3, 02-093, Warsaw, Poland.
Ludwiczak J; University of Warsaw, Centre of New Technologies, Laboratory of Structural Bioinformatics, 02-097, Warsaw, Poland.; Nencki Institute of Experimental Biology, Laboratory of Bioinformatics, Pasteura 3, 02-093, Warsaw, Poland.
Jasiński M; University of Warsaw, Centre of New Technologies, Laboratory of Structural Bioinformatics, 02-097, Warsaw, Poland.
Dunin-Horkawicz S; University of Warsaw, Centre of New Technologies, Laboratory of Structural Bioinformatics, 02-097, Warsaw, Poland.
Sitkiewicz E; Mass Spectrometry Laboratory, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5a, 02-106, Warsaw, Poland.
Swiderska B; Mass Spectrometry Laboratory, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawinskiego 5a, 02-106, Warsaw, Poland.
Goch G; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics PAS, Pawinskiego 5a, 02-106, Warsaw, Poland.
Jagura-Burdzy G; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics PAS, Pawinskiego 5a, 02-106, Warsaw, Poland.
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Źródło:
BMC microbiology [BMC Microbiol] 2021 Jan 22; Vol. 21 (1), pp. 32. Date of Electronic Publication: 2021 Jan 22.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Bacterial Proteins/*metabolism
Cytoskeletal Proteins/*chemistry
Cytoskeletal Proteins/*metabolism
DNA-Binding Proteins/*metabolism
Escherichia coli/*genetics
Plasmids/*genetics
Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Binding Sites ; Computer Simulation ; Conjugation, Genetic ; Cytoskeletal Proteins/genetics ; DNA-Binding Proteins/chemistry ; Escherichia coli/chemistry ; Escherichia coli/metabolism ; Transcription, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Overexpression of the Bacteriophage T4 motB Gene Alters H-NS Dependent Repression of Specific Host DNA.
Autorzy:
Patterson-West J; Gene Expression and Regulation Section, Laboratory of Cell and Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Tai CH; Center for Cancer Research, Laboratory of Molecular Biology, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Son B; Gene Expression and Regulation Section, Laboratory of Cell and Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Hsieh ML; Gene Expression and Regulation Section, Laboratory of Cell and Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Iben JR; Molecular Genomics Core, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Hinton DM; Gene Expression and Regulation Section, Laboratory of Cell and Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
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Źródło:
Viruses [Viruses] 2021 Jan 09; Vol. 13 (1). Date of Electronic Publication: 2021 Jan 09.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural
MeSH Terms:
Gene Expression*
Genes, Viral*
Host-Pathogen Interactions*
Bacteria/*metabolism
Bacteria/*virology
Bacterial Proteins/*metabolism
Bacteriophage T4/*genetics
DNA-Binding Proteins/*metabolism
Bacterial Proteins/chemistry ; Base Sequence ; DNA-Binding Proteins/chemistry ; Phylogeny ; T-Phages/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The putative sensor histidine kinase PhcK is required for the full expression of phcA encoding the global transcriptional regulator to drive the quorum-sensing circuit of Ralstonia solanacearum strain OE1-1.
Autorzy:
Senuma W; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Takemura C; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Hayashi K; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Ishikawa S; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Kiba A; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Ohnishi K; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
Kai K; Graduate School of Life and Environmental Sciences, Osaka Prefecture University, Sakai, Japan.
Hikichi Y; Faculty of Agriculture and Marine Science, Kochi University, Nankoku, Japan.
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Źródło:
Molecular plant pathology [Mol Plant Pathol] 2020 Dec; Vol. 21 (12), pp. 1591-1605. Date of Electronic Publication: 2020 Oct 06.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcriptome*
Bacterial Proteins/*metabolism
DNA-Binding Proteins/*metabolism
Histidine Kinase/*metabolism
Quorum Sensing/*genetics
Ralstonia solanacearum/*genetics
Transcription Factors/*metabolism
Bacterial Proteins/genetics ; Cell Aggregation ; DNA Transposable Elements ; DNA-Binding Proteins/genetics ; Gene Expression Regulation, Bacterial ; Histidine Kinase/genetics ; Mutagenesis, Insertional ; Myristates/metabolism ; Promoter Regions, Genetic/genetics ; Ralstonia solanacearum/enzymology ; Ralstonia solanacearum/pathogenicity ; Ralstonia solanacearum/physiology ; Sequence Analysis, RNA ; Transcription Factors/genetics ; Virulence Factors/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Small Prokaryotic DNA-Binding Proteins Protect Genome Integrity throughout the Life Cycle.
Autorzy:
Molan K; Department of Microbiology, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Žgur Bertok D; Department of Biology, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2022 Apr 04; Vol. 23 (7). Date of Electronic Publication: 2022 Apr 04.
Typ publikacji:
Journal Article; Review
MeSH Terms:
DNA-Binding Proteins*/metabolism
Deinococcus*/genetics
Deinococcus*/metabolism
Animals ; Bacterial Proteins/metabolism ; DNA/metabolism ; DNA Replication ; DNA, Single-Stranded/metabolism ; Life Cycle Stages
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Structure-based inhibitors targeting the alpha-helical domain of the Spiroplasma melliferum histone-like HU protein.
Autorzy:
Agapova YK; National Research Center 'Kurchatov Institute', Akad. Kurchatova pl., 1, Moscow, 123182, Russian Federation. .
Altukhov DA; National Research Center 'Kurchatov Institute', Akad. Kurchatova pl., 1, Moscow, 123182, Russian Federation.
Timofeev VI; Federal Scientific Research Center 'Crystallography and Photonics', Russian Academy of Sciences, Leninskii Pr., 59, Moscow, 119333, Russian Federation.
Stroylov VS; N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninskii pr., 47, Moscow, 119991, Russian Federation.
Mityanov VS; N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninskii pr., 47, Moscow, 119991, Russian Federation.; D. Mendeleyev, University of Chemical Technology of Russia, Miusskaya sq., 9, Moscow, 125047, Russian Federation.
Korzhenevskiy DA; National Research Center 'Kurchatov Institute', Akad. Kurchatova pl., 1, Moscow, 123182, Russian Federation.
Vlaskina AV; National Research Center 'Kurchatov Institute', Akad. Kurchatova pl., 1, Moscow, 123182, Russian Federation.
Smirnova EV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, ul. Miklukho-Maklaya, 16/10, Moscow, 117997, Russian Federation.
Bocharov EV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, ul. Miklukho-Maklaya, 16/10, Moscow, 117997, Russian Federation. .; Moscow Institute of Physics and Technology (State University), Institutskiy Per., 9, Dolgoprudny, Moscow Region, 141701, Russian Federation. .
Rakitina TV; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, ul. Miklukho-Maklaya, 16/10, Moscow, 117997, Russian Federation. .
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Źródło:
Scientific reports [Sci Rep] 2020 Sep 15; Vol. 10 (1), pp. 15128. Date of Electronic Publication: 2020 Sep 15.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Molecular Docking Simulation*
Protein Conformation, alpha-Helical*
Bacterial Proteins/*antagonists & inhibitors
DNA, Bacterial/*metabolism
DNA-Binding Proteins/*antagonists & inhibitors
Fluorenes/*pharmacology
Histones/*chemistry
Spiroplasma/*growth & development
Amino Acid Sequence ; Bacterial Proteins/metabolism ; Binding Sites ; DNA-Binding Proteins/metabolism ; Fluorenes/chemistry ; High-Throughput Screening Assays ; Molecular Dynamics Simulation ; Spiroplasma/drug effects ; Spiroplasma/metabolism
SCR Organism:
Spiroplasma melliferum
Czasopismo naukowe
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Tytuł:
Deciphering the functional diversity of DNA-binding transcription factors in Bacteria and Archaea organisms.
Autorzy:
Flores-Bautista E; Instituto de Investigaciones en Matemáticas Aplicadas y en Sistemas, Universidad Nacional Autónoma de México, Unidad Académica Yucatán, Mérida, Yucatán, México.
Hernandez-Guerrero R; Instituto de Investigaciones en Matemáticas Aplicadas y en Sistemas, Universidad Nacional Autónoma de México, Unidad Académica Yucatán, Mérida, Yucatán, México.
Huerta-Saquero A; Centro de Nanociencias y Nanotecnología, Universidad Nacional Autónoma de México, Ensenada, Baja California, México.
Tenorio-Salgado S; Tecnológico Nacional de México, Instituto Tecnológico de Mérida, Mérida, Yucatán, México.
Rivera-Gomez N; Instituto Nacional de Salud Pública, Cuernavaca, Morelos, México.
Romero A; Microbiota Host Interactions and Clostridia Research Group, Universidad Nacional Andrés Bello, Santiago de Chile, Chile.
Ibarra JA; Laboratorio de Genética Microbiana, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Ciudad de México, México.
Perez-Rueda E; Instituto de Investigaciones en Matemáticas Aplicadas y en Sistemas, Universidad Nacional Autónoma de México, Unidad Académica Yucatán, Mérida, Yucatán, México.; Centro de Genómica y Bioinformática, Facultad de Ciencias, Universidad Mayor, Santiago, Chile.
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Źródło:
PloS one [PLoS One] 2020 Aug 21; Vol. 15 (8), pp. e0237135. Date of Electronic Publication: 2020 Aug 21 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Archaea/*genetics
Archaeal Proteins/*genetics
Bacterial Proteins/*genetics
DNA-Binding Proteins/*genetics
Escherichia coli K12/*genetics
Transcription Factors/*genetics
Archaea/pathogenicity ; Archaeal Proteins/metabolism ; Bacterial Proteins/metabolism ; Binding Sites ; DNA, Archaeal/metabolism ; DNA, Bacterial/metabolism ; DNA-Binding Proteins/metabolism ; Escherichia coli K12/pathogenicity ; Gene Expression Regulation, Archaeal ; Gene Expression Regulation, Bacterial ; Genome, Archaeal ; Genome, Bacterial ; Protein Binding ; Transcription Factors/metabolism ; Virulence/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
A disulfide constrains the ToxR periplasmic domain structure, altering its interactions with ToxS and bile-salts.
Autorzy:
Midgett CR; Department of Chemistry, Dartmouth College, Hanover, NH, USA. .
Swindell RA; Department of Chemistry, Dartmouth College, Hanover, NH, USA.
Pellegrini M; Department of Chemistry, Dartmouth College, Hanover, NH, USA.
Jon Kull F; Department of Chemistry, Dartmouth College, Hanover, NH, USA.
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Źródło:
Scientific reports [Sci Rep] 2020 Jun 02; Vol. 10 (1), pp. 9002. Date of Electronic Publication: 2020 Jun 02.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Bacterial Proteins/*chemistry
Bacterial Proteins/*metabolism
Bile Acids and Salts/*metabolism
DNA-Binding Proteins/*chemistry
DNA-Binding Proteins/*metabolism
Disulfides/*chemistry
Membrane Proteins/*metabolism
Transcription Factors/*chemistry
Transcription Factors/*metabolism
Bacterial Proteins/genetics ; Calorimetry, Differential Scanning ; Crystallography, X-Ray ; DNA-Binding Proteins/genetics ; Membrane Proteins/chemistry ; Models, Molecular ; Periplasm/chemistry ; Periplasm/metabolism ; Protein Domains ; Protein Multimerization ; Transcription Factors/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Wyświetlanie 1-20 z 734

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