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Wyszukujesz frazę ""Bacterial Typing Techniques"" wg kryterium: Temat


Tytuł :
Could LASCA-imaging of GB-speckles be applied for a high discrimination and typing of pathogenic bacteria?
Autorzy :
Ulianova O; Department of Medical Physics, Saratov State University, Saratov, Russia.
Ulyanov S; Department of Medical Physics, Saratov State University, Saratov, Russia.; Federal Research Center for Virology and Microbiology, Branch in Saratov, Saratov, Russia.
Zaytsev S; Federal Research Center for Virology and Microbiology, Branch in Saratov, Saratov, Russia.
Saltykov Y; Federal Research Center for Virology and Microbiology, Branch in Saratov, Saratov, Russia.
Ulyanov A; Department of Medical Physics, Saratov State University, Saratov, Russia.
Feodorova V; Federal Research Center for Virology and Microbiology, Branch in Saratov, Saratov, Russia.
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Źródło :
PloS one [PLoS One] 2021 Jan 28; Vol. 16 (1), pp. e0245657. Date of Electronic Publication: 2021 Jan 28 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Bacterial Typing Techniques*
Chlamydia trachomatis*/classification
Chlamydia trachomatis*/genetics
Chlamydia trachomatis*/metabolism
Diagnostic Imaging*
Genes, Bacterial*
Lasers*
DNA, Bacterial/*genetics
Czasopismo naukowe
Tytuł :
Contrasting genetic diversity and structure among Malagasy Ralstonia pseudosolanacearum phylotype I populations inferred from an optimized Multilocus Variable Number of Tandem Repeat Analysis scheme.
Autorzy :
Rasoamanana H; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Ravelomanantsoa S; Centre National de la Recherche Appliquée au Développement Rural FOFIFA, Antananarivo, Madagascar.
Yahiaoui N; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Dianzinga N; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Rébert E; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Gauche MM; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Pecrix Y; Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Saint-Pierre, Réunion, France.
Costet L; Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Saint-Pierre, Réunion, France.
Rieux A; Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Saint-Pierre, Réunion, France.
Prior P; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Saint-Pierre, Réunion, France.
Robène I; Centre de Coopération Internationale en Recherche Agronomique pour le Développement, UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Saint-Pierre, Réunion, France.
Cellier G; Anses - Plant Health Laboratory - Tropical Pests and Diseases Unit, Saint-Pierre, Réunion, France.
Guérin F; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
Poussier S; UMR Peuplements Végétaux et Bioagresseurs en Milieu Tropical, Université de La Réunion, Saint-Pierre, Réunion, France.
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Źródło :
PloS one [PLoS One] 2020 Dec 08; Vol. 15 (12), pp. e0242846. Date of Electronic Publication: 2020 Dec 08 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Bacterial Typing Techniques*
Genetic Variation*
Multilocus Sequence Typing*
Phylogeny*
Ralstonia/*classification
Ralstonia/*genetics
Tandem Repeat Sequences/*genetics
Genotype
SCR Organism :
Ralstonia pseudosolanacearum
Czasopismo naukowe
Tytuł :
Development of a hierarchical typing approach for Mycobacterium avium subsp. paratuberculosis (MAP) and characterization of MAP field cultures from Central Germany.
Autorzy :
Fawzy A; Department of Medicine and Infectious Diseases, Faculty of Veterinary Medicine, Cairo University, Giza Square, Egypt.; Institute for Hygiene and Infectious Diseases of Animals, Justus-Liebig-University, Giessen, Germany.; Hessian State Laboratory, Giessen, Germany.
Zschöck M; Hessian State Laboratory, Giessen, Germany.
Ewers C; Institute for Hygiene and Infectious Diseases of Animals, Justus-Liebig-University, Giessen, Germany.
Eisenberg T; Institute for Hygiene and Infectious Diseases of Animals, Justus-Liebig-University, Giessen, Germany.; Hessian State Laboratory, Giessen, Germany.
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Źródło :
Journal of applied microbiology [J Appl Microbiol] 2020 Nov; Vol. 129 (5), pp. 1193-1206. Date of Electronic Publication: 2020 Jun 14.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Typing Techniques/*veterinary
Cattle Diseases/*microbiology
Mycobacterium avium subsp. paratuberculosis/*classification
Mycobacterium avium subsp. paratuberculosis/*isolation & purification
Paratuberculosis/*microbiology
Animals ; Bacterial Typing Techniques/methods ; Cattle ; Cattle Diseases/epidemiology ; DNA, Bacterial/genetics ; Genotype ; Germany/epidemiology ; Minisatellite Repeats/genetics ; Mycobacterium avium subsp. paratuberculosis/genetics ; Paratuberculosis/epidemiology ; Phylogeny ; Polymorphism, Single Nucleotide/genetics
Czasopismo naukowe
Tytuł :
The MPB64 immunochromatography assay: an analysis of doubtful results.
Autorzy :
Kumar C; Senior Research Fellow, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
Shrivastava K; Senior Research Fellow, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
Singh A; Research Assistant, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
Sharma NK; Senior Research Fellow, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
Yadav J; Senior Technical Assistant, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
Varma-Basil M; Professor, Department of Microbiology, 72916Vallabhbhai Patel Chest Institute, University of Delhi, New Delhi, India.
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Źródło :
Tropical doctor [Trop Doct] 2020 Oct; Vol. 50 (4), pp. 340-343. Date of Electronic Publication: 2020 Jun 26.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatography, Affinity*/standards
Bacterial Typing Techniques/*methods
Mycobacterium tuberculosis/*isolation & purification
Tuberculosis/*diagnosis
Bacterial Typing Techniques/standards ; Humans ; Mycobacterium tuberculosis/genetics ; Mycobacterium tuberculosis/immunology ; Polymerase Chain Reaction ; Sensitivity and Specificity ; Tuberculosis/microbiology
Czasopismo naukowe
Tytuł :
Description of Erythrobacter mangrovi sp. nov., an aerobic bacterium from rhizosphere soil of mangrove plant (Kandelia candel).
Autorzy :
Ye YH; Ocean College, Zhejiang University, Zhoushan, 316021, People's Republic of China.
Anwar N; College of Life Sciences, Zhejiang University, Hangzhou, 310058, People's Republic of China.
Xamxidin M; College of Life Sciences, Zhejiang University, Hangzhou, 310058, People's Republic of China.
Zhang R; College of Life Sciences, Zhejiang University, Hangzhou, 310058, People's Republic of China.
Yan C; Ocean College, Zhejiang University, Zhoushan, 316021, People's Republic of China.
Nie YF; College of Life Sciences, Zhejiang University, Hangzhou, 310058, People's Republic of China.
Zhao Z; College of Life Sciences, Zhejiang University, Hangzhou, 310058, People's Republic of China.
Sun C; College of Life Sciences and Medicine, Zhejiang Sci-Tech University, Hangzhou, 310018, People's Republic of China. .
Wu M; Ocean College, Zhejiang University, Zhoushan, 316021, People's Republic of China. .
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Źródło :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2020 Oct; Vol. 113 (10), pp. 1425-1435. Date of Electronic Publication: 2020 Jul 21.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Typing Techniques*
Rhizosphere*
Soil Microbiology*
Rhizophoraceae/*microbiology
Sphingomonadaceae/*classification
Sphingomonadaceae/*isolation & purification
Computational Biology/methods ; DNA Barcoding, Taxonomic ; Data Mining ; Genome, Bacterial ; Genomics/methods ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Sphingomonadaceae/chemistry ; Sphingomonadaceae/genetics
Czasopismo naukowe
Tytuł :
Lentzea indica sp. nov., a novel actinobacteria isolated from Indian Himalayan-soil.
Autorzy :
Maiti PK; Laboratory of Molecular Bacteriology, Department of Microbiology, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India.
Mandal S; Laboratory of Molecular Bacteriology, Department of Microbiology, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India. .
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Źródło :
Antonie van Leeuwenhoek [Antonie Van Leeuwenhoek] 2020 Oct; Vol. 113 (10), pp. 1411-1423. Date of Electronic Publication: 2020 Jul 22.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Typing Techniques*
Soil Microbiology*
Actinobacteria/*classification
Actinobacteria/*isolation & purification
Actinobacteria/growth & development ; Genotyping Techniques ; India ; Mycelium ; Phenotype ; Phylogeny ; RNA, Ribosomal, 16S/genetics
Czasopismo naukowe
Tytuł :
New Arctic Bacterial Isolates with Relevant Enzymatic Potential.
Autorzy :
Piegza M; Department of Biotechnology and Food Microbiology, Wrocław University of Environmental and Life Sciences, Chelmonskiego 37, 51-630 Wroclaw, Poland.
Łaba W; Department of Biotechnology and Food Microbiology, Wrocław University of Environmental and Life Sciences, Chelmonskiego 37, 51-630 Wroclaw, Poland.
Kačániová M; Department of Fruit Sciences, Viticulture and Enology, Faculty of Horticulture and Landscape Engineering, Slovak University of Agriculture, Tr. A. Hlinku 2, 94976 Nitra, Slovakia.; Department of Bioenergetics, Food Analysis and Microbiology, Institute of Food Technology and Nutrition, University of Rzeszow, Cwiklinskiej 1, 35-601 Rzeszow, Poland.
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Źródło :
Molecules (Basel, Switzerland) [Molecules] 2020 Aug 28; Vol. 25 (17). Date of Electronic Publication: 2020 Aug 28.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Typing Techniques*
Bacteria/*classification
Bacteria/*enzymology
Arctic Regions ; Bacteria/isolation & purification ; Bacterial Proteins/metabolism ; Enzyme Activation ; Hydrolysis
Czasopismo naukowe
Tytuł :
Comparison of pulsed-field gel electrophoresis and whole-genome-sequencing-based typing confirms the accuracy of pulsed-field gel electrophoresis for the investigation of local Pseudomonas aeruginosa outbreaks.
Autorzy :
Martak D; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France. Electronic address: .
Meunier A; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France.
Sauget M; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France; Centre de Ressources Biologiques - Filière Microbiologique de Besançon, Centre Hospitalier Régional Universitaire, Besançon, France.
Cholley P; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France.
Thouverez M; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France.
Bertrand X; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France.
Valot B; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France.
Hocquet D; Hygiène Hospitalière, Centre Hospitalier Régional Universitaire, Besançon, France; UMR 6249, Laboratoire Chrono-environnement, CNRS-Université de Bourgogne Franche-Comté, Besançon, France; Centre de Ressources Biologiques - Filière Microbiologique de Besançon, Centre Hospitalier Régional Universitaire, Besançon, France.
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Źródło :
The Journal of hospital infection [J Hosp Infect] 2020 Aug; Vol. 105 (4), pp. 643-647. Date of Electronic Publication: 2020 Jun 22.
Typ publikacji :
Comparative Study; Journal Article; Multicenter Study
MeSH Terms :
Bacterial Typing Techniques/*standards
Electrophoresis, Gel, Pulsed-Field/*standards
Pseudomonas Infections/*microbiology
Pseudomonas aeruginosa/*genetics
Whole Genome Sequencing/*standards
Bacterial Typing Techniques/methods ; Disease Outbreaks ; Electrophoresis, Gel, Pulsed-Field/methods ; Europe/epidemiology ; Genome, Bacterial ; Humans ; Multilocus Sequence Typing ; Pseudomonas Infections/diagnosis ; Pseudomonas Infections/epidemiology ; Pseudomonas aeruginosa/classification ; Reproducibility of Results ; Whole Genome Sequencing/methods
Czasopismo naukowe
Tytuł :
Workflow optimization for syndromic diarrhea diagnosis using the molecular Seegene Allplex™ GI-Bacteria(I) assay.
Autorzy :
Zimmermann S; Department for Infectious Diseases, Medical Microbiology and Hygiene, University Hospital Heidelberg, Heidelberg, Germany.
Horner S; Department for Infectious Diseases, Medical Microbiology and Hygiene, University Hospital Heidelberg, Heidelberg, Germany.
Altwegg M; Bioanalytica AG, Lucerne, Switzerland.
Dalpke AH; Department for Infectious Diseases, Medical Microbiology and Hygiene, University Hospital Heidelberg, Heidelberg, Germany. .; Institute of Medical Microbiology and Hygiene, Medical Faculty, Technische Universität Dresden, Dresden, Germany, Fetscherstraße 74, 01307, Dresden, Germany. .
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Źródło :
European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology [Eur J Clin Microbiol Infect Dis] 2020 Jul; Vol. 39 (7), pp. 1245-1250. Date of Electronic Publication: 2020 Feb 06.
Typ publikacji :
Journal Article
MeSH Terms :
Bacteria/*isolation & purification
Bacterial Typing Techniques/*methods
Diarrhea/*diagnosis
Molecular Diagnostic Techniques/*methods
Bacteria/classification ; Bacteria/genetics ; Bacterial Typing Techniques/standards ; Diagnostic Tests, Routine ; Diarrhea/microbiology ; Feces/microbiology ; Humans ; Molecular Diagnostic Techniques/standards ; Multiplex Polymerase Chain Reaction ; Sensitivity and Specificity ; Time Factors ; Workflow
Czasopismo naukowe
Tytuł :
Flavimobilis rhizosphaerae sp. nov., isolated from rhizosphere soil of Spartina alterniflora .
Autorzy :
Cai H; School of Marine Science and Biotechnology, Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Guangxi University for Nationalities, Nanning 530008, PR China.
Shi S; School of Chemistry and Chemical Engineering, Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, Guangxi University for Nationalities, Nanning 530008, PR China.
Wu J; School of Marine Science and Biotechnology, Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Guangxi University for Nationalities, Nanning 530008, PR China.
Yang L; School of Chemistry and Chemical Engineering, Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, Guangxi University for Nationalities, Nanning 530008, PR China.
Wang F; School of Marine Science and Biotechnology, Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Guangxi University for Nationalities, Nanning 530008, PR China.
Jiang C; Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.
Gao C; School of Chemistry and Chemical Engineering, Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, Guangxi University for Nationalities, Nanning 530008, PR China.
Yang S; Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.
Jiang M; School of Marine Science and Biotechnology, Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Guangxi University for Nationalities, Nanning 530008, PR China.
Jiang Y; Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, PR China.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jun; Vol. 71 (6).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Rhizosphere*
Soil Microbiology*
Actinobacteria/*classification
Poaceae/*microbiology
Actinobacteria/isolation & purification ; Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Nucleic Acid Hybridization ; Peptidoglycan/chemistry ; Phospholipids/chemistry ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Alborzia kermanshahica gen. nov., sp. nov. (Chroococcales, Cyanobacteria), isolated from paddy fields in Iran.
Autorzy :
Nowruzi B; Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Soares F; Department of Life Sciences, Centre for Functional Ecology, University of Coimbra, Coimbra 3000-456, Portugal.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jun; Vol. 71 (6).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Cyanobacteria/*classification
Fresh Water/*microbiology
Bacterial Typing Techniques ; Base Composition ; Bayes Theorem ; Cyanobacteria/isolation & purification ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Iran ; Oryza ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Pseudomonas paraversuta sp. nov. isolated from refrigerated dry-aged beef.
Autorzy :
Lick S; Department of Safety and Quality of Meat, Max Rubner-Institut, Federal Research Institute for Nutrition and Food, E.-C.-Baumann Straße 20, D-95326 Kulmbach, Germany.
Wibberg D; Center for Biotechnology - CeBiTec, Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany.
Winkler A; Center for Biotechnology - CeBiTec, Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany.
Blom J; Bioinformatics and Systems Biology, Justus-Liebig-University Gießen, Heinrich-Buff-Ring 58, D-35392 Gießen, Germany.
Grimmler C; Chair of Bioanalytical Sciences and Food Analysis, University Bayreuth, Universitätsstraße 30, D-95447 Bayreuth and Max Rubner-Institut, E.C.-Baumann Straße 20, D-95326 Kulmbach, Germany.; Department of Safety and Quality of Meat, Max Rubner-Institut, Federal Research Institute for Nutrition and Food, E.-C.-Baumann Straße 20, D-95326 Kulmbach, Germany.
Goesmann A; Bioinformatics and Systems Biology, Justus-Liebig-University Gießen, Heinrich-Buff-Ring 58, D-35392 Gießen, Germany.
Kalinowski J; Center for Biotechnology - CeBiTec, Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany.
Kröckel L; Department of Safety and Quality of Meat, Max Rubner-Institut, Federal Research Institute for Nutrition and Food, E.-C.-Baumann Straße 20, D-95326 Kulmbach, Germany.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jun; Vol. 71 (6).
Typ publikacji :
Journal Article
MeSH Terms :
Food Microbiology*
Phylogeny*
Pseudomonas/*classification
Red Meat/*microbiology
Animals ; Bacterial Typing Techniques ; Base Composition ; Cattle ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Genes, Bacterial ; Germany ; Nucleic Acid Hybridization ; Phospholipids/chemistry ; Pseudomonas/isolation & purification ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Ubiquinone/chemistry
Czasopismo naukowe
Tytuł :
Kordia aestuariivivens sp. nov. and Olleya sediminilitoris sp. nov., isolated from a tidal flat.
Autorzy :
Park S; Department of Food Science and Biotechnology, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, Suwon, Republic of Korea.
Lee JS; Korean Collection for Type Cultures (KCTC), Korea Research Institute of Bioscience and Biotechnology (KRIBB), 181 Ipsin-gil, Jeongeup, Republic of Korea.
Kim W; Department of Microbiology, Chung-Ang University College of Medicine, 84 Heukseok-ro, Dongjak-gu, Seoul, Republic of Korea.
Yoon JH; Department of Food Science and Biotechnology, Sungkyunkwan University, 2066 Seobu-ro, Jangan-gu, Suwon, Republic of Korea.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 Jun; Vol. 71 (6).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Flavobacteriaceae/*classification
Geologic Sediments/*microbiology
Seawater/*microbiology
Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Flavobacteriaceae/isolation & purification ; Phospholipids/chemistry ; RNA, Ribosomal, 16S/genetics ; Republic of Korea ; Sequence Analysis, DNA ; Vitamin K 2/analogs & derivatives ; Vitamin K 2/chemistry
Czasopismo naukowe
Tytuł :
Incidence of Salmonella serovars isolated from commercial animal feed mills in the United States and serovar identification using CRISPR analysis.
Autorzy :
Shariat NW; Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
Feye KM; Center for Food Safety, Department of Food Science, University of Arkansas, Fayetteville, AR, USA.
Richards AK; Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
Booher B; Department of Engineering, University of Arkansas, Fayetteville, AR, USA.
Flores Z; Department of Engineering, University of Arkansas, Fayetteville, AR, USA.
Rubinelli PM; Center for Food Safety, Department of Food Science, University of Arkansas, Fayetteville, AR, USA.
Olson EG; Meat Science and Animal Biologicals Discovery Program, Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison, WI, USA.
Ricke SC; Meat Science and Animal Biologicals Discovery Program, Department of Animal and Dairy Sciences, University of Wisconsin-Madison, Madison, WI, USA.
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Źródło :
Journal of applied microbiology [J Appl Microbiol] 2021 Jun; Vol. 130 (6), pp. 2141-2146. Date of Electronic Publication: 2020 Nov 29.
Typ publikacji :
Journal Article
MeSH Terms :
Animal Feed/*microbiology
Salmonella enterica/*classification
Salmonella enterica/*genetics
Animals ; Bacterial Typing Techniques ; Clustered Regularly Interspaced Short Palindromic Repeats ; DNA, Bacterial ; Incidence ; Molecular Typing ; Polymerase Chain Reaction ; Salmonella Infections, Animal/epidemiology ; Salmonella enterica/isolation & purification ; Serogroup ; Serotyping ; United States/epidemiology
Czasopismo naukowe
Tytuł :
New human-associated species of the family Atopobiaceae and proposal to reclassify members of the genus Olsenella .
Autorzy :
Zgheib R; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.; Aix Marseille Université, Institut de Recherche pour le Développement (IRD), Service de Santé des Armées, AP-HM, UMR Vecteurs Infections Tropicales et Méditerranéennes (VITROME), Marseille, France.
Anani H; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.; Aix Marseille Université, Institut de Recherche pour le Développement (IRD), Service de Santé des Armées, AP-HM, UMR Vecteurs Infections Tropicales et Méditerranéennes (VITROME), Marseille, France.
Meng MM; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.; Aix Marseille Université, Institut de Recherche pour le Développement (IRD), Service de Santé des Armées, AP-HM, UMR Vecteurs Infections Tropicales et Méditerranéennes (VITROME), Marseille, France.
Mailhe M; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Ricaboni D; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Morand A; Pédiatrie spécialisée et médecine infantile, Hôpital de la Timone, AP-HM, Marseille, France.; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.
Caputo A; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Traore SI; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Fontanini A; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Armstrong N; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Raoult D; Special Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.; Aix-Marseille Université, Institut de Recherche pour le Développement (IRD), UMR Microbes Evolution Phylogeny and Infections (MEPHI), Marseille, France.; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.
Fournier PE; Institut Hospitalo-Universitaire Méditerranée Infection, Marseille, France.; Aix Marseille Université, Institut de Recherche pour le Développement (IRD), Service de Santé des Armées, AP-HM, UMR Vecteurs Infections Tropicales et Méditerranéennes (VITROME), Marseille, France.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Actinobacteria/*classification
Bacterial Typing Techniques ; DNA, Bacterial/genetics ; Genomics ; Humans ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
SCR Organism :
Olsenella phocaeensis; Olsenella scatoligenes; Olsenella umbonata; Olsenella urininfantis
Czasopismo naukowe
Tytuł :
Sphingobacterium lumbrici sp. nov., a novel bacterium isolated from wormcast of Eisenia foetida .
Autorzy :
Zhang XF; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Shi R; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Chen M; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Zhou XK; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Wei YQ; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Cha QY; Kunming Center for Disease Control and Prevention, Kunming, 650228, PR China.
Li N; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Su YX; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Ma L; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Mo MH; State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, 650091, PR China.
Cao Y; Guizhou Academy of Tobacco Science, Guiyang, 550081, PR China.
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Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Oligochaeta/*microbiology
Sphingobacterium/*classification
Animals ; Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Glycolipids/chemistry ; Nucleic Acid Hybridization ; Phospholipids/chemistry ; Pigmentation ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Sphingobacterium/isolation & purification ; Vitamin K 2/analogs & derivatives ; Vitamin K 2/chemistry
Czasopismo naukowe
Tytuł :
Description of Clavibacter zhangzhiyongii sp. nov., a phytopathogenic actinobacterium isolated from barley seeds, causing leaf brown spot and decline.
Autorzy :
Tian Q; Institute of Plant Quarantine Research, Chinese Academy of Inspection and Quarantine, Beijing 100176, PR China.
Chuan J; Canadian Food Inspection Agency (CFIA), Charlottetown Laboratory, Charlottetown, PE C1A 5T1, Canada.
Sun X; College of Plant Protection, Southwest University, Chongqing 400715, PR China.
Zhou A; College of Marine Sciences, South China Agricultural University, Guangzhou 510642, PR China.; Canadian Food Inspection Agency (CFIA), Charlottetown Laboratory, Charlottetown, PE C1A 5T1, Canada.
Wang L; College of Plant Protection, Southwest University, Chongqing 400715, PR China.
Zou J; College of Marine Sciences, South China Agricultural University, Guangzhou 510642, PR China.
Zhao W; Institute of Plant Quarantine Research, Chinese Academy of Inspection and Quarantine, Beijing 100176, PR China.
Li X; Canadian Food Inspection Agency (CFIA), Charlottetown Laboratory, Charlottetown, PE C1A 5T1, Canada.
Pokaż więcej
Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Clavibacter/*classification
Hordeum/*microbiology
Plant Diseases/*microbiology
Seeds/*microbiology
Australia ; Bacterial Typing Techniques ; Base Composition ; China ; Clavibacter/isolation & purification ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Multilocus Sequence Typing ; Pigmentation ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Corynebacterium lizhenjunii sp. nov., isolated from the respiratory tract of Marmota himalayana , and Corynebacterium qintianiae sp. nov., isolated from the lung tissue of Pseudois nayaur .
Autorzy :
Zhou J; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Xu M; Department of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, Nanjing 211166, Jiangsu Province, PR China.; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Guo W; Qinghai Province Institute for Endemic Diseases Prevention and Control, Xining 811602, Qinghai Province, PR China.
Yang J; Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, PR China.; Shanghai Institute for Emerging and Re-emerging Infectious Diseases, Shanghai Public Health Clinical Center, Shanghai 201508, PR China.; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Pu J; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Lai XH; Henan Key Laboratory of Biomolecular Recognition and Sensing, College of Chemistry and Chemical Engineering, Henan Joint International Research Laboratory of Chemo/Biosensing and Early Diagnosis of Major Diseases, Shangqiu Normal University, Shangqiu 476000, Henan Province, PR China.
Jin D; Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, PR China.; Shanghai Institute for Emerging and Re-emerging Infectious Diseases, Shanghai Public Health Clinical Center, Shanghai 201508, PR China.; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Lu S; Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, PR China.; Shanghai Institute for Emerging and Re-emerging Infectious Diseases, Shanghai Public Health Clinical Center, Shanghai 201508, PR China.; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Zhang S; Department of Laboratorial Science and Technology & Vaccine Research Center, School of Public Health, Peking University, Beijing 100191, PR China.
Huang Y; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Zhu W; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Huang Y; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Zheng H; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Xu J; Shanghai Institute for Emerging and Re-emerging Infectious Diseases, Shanghai Public Health Clinical Center, Shanghai 201508, PR China.; Research Units of Discovery of Unknown Bacteria and Function, Chinese Academy of Medical Sciences, Beijing 100730, PR China.; State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, PR China.
Pokaż więcej
Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Corynebacterium/*classification
Lung/*microbiology
Marmota/*microbiology
Respiratory System/*microbiology
Sheep/*microbiology
Animals ; Bacterial Typing Techniques ; Base Composition ; China ; Corynebacterium/isolation & purification ; DNA, Bacterial/genetics ; Diaminopimelic Acid/chemistry ; Fatty Acids/chemistry ; Nucleic Acid Hybridization ; Phospholipids/chemistry ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Vitamin K 2/chemistry
Czasopismo naukowe
Tytuł :
Isolation of Thalassobius mangrovi sp. nov., a novel bacterium in the family Rhodobacteraceae, from marine mangrove sediment.
Autorzy :
Chen S; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Zheng S; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Zhang D; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Hetharua B; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Gui J; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
An X; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Xu H; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, PR China.
Pokaż więcej
Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Geologic Sediments/*microbiology
Rhodobacteraceae/*classification
Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Phospholipids/chemistry ; RNA, Ribosomal, 16S/genetics ; Rhodobacteraceae/isolation & purification ; Sequence Analysis, DNA ; Wetlands
Czasopismo naukowe
Tytuł :
Phnomibacter ginsenosidimutans gen. nov., sp. nov., a novel glycoside hydrolase positive bacterial strain with ginsenoside hydrolysing activity.
Autorzy :
Siddiqi MZ; AceEMzyme Co., Ltd., Academic Industry Cooperation, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.; Department of Biotechnology, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
Sambath P; Major in Integrated Chemical and Environmental Technology, Graduate School of Chemical Engineering, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.; Department of Biotechnology, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
Im WT; AceEMzyme Co., Ltd., Academic Industry Cooperation, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.; Department of Biotechnology, Hankyong National University, 327 Jungang-ro Anseong-si, Gyeonggi-do 17579, Republic of Korea.
Pokaż więcej
Źródło :
International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2021 May; Vol. 71 (5).
Typ publikacji :
Journal Article
MeSH Terms :
Phylogeny*
Bacteroidetes/*classification
Ginsenosides/*metabolism
Waste Water/*microbiology
Bacterial Typing Techniques ; Bacteroidetes/enzymology ; Bacteroidetes/isolation & purification ; Base Composition ; Cambodia ; DNA, Bacterial/genetics ; Fatty Acids/chemistry ; Glycoside Hydrolases/genetics ; Phospholipids/chemistry ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; Vitamin K 2/analogs & derivatives ; Vitamin K 2/chemistry
Czasopismo naukowe

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