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Tytuł:
Anaerobutyricum soehngenii Reduces Hepatic Lipogenic Pathways and Increases Intestinal Gluconeogenic Gene Expression in Metabolic-Dysfunction-Associated Steatotic Liver Disease (MASLD) Mice.
Autorzy:
Mak AL; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Augustijn QJJ; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Heymann CJF; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Havik S; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Verdoes X; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Rios-Morales M; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Bosmans LA; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Verheij J; Department of Pathology, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Meijnikman AS; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
de Jonge PA; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Herrema H; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
de Vos WM; Caelus Health, 1105 BP Amsterdam, The Netherlands.; Laboratory of Microbiology, Wageningen University & Research, 6708 WE Wageningen, The Netherlands.; Human Microbiome Research Program, Faculty of Medicine, University of Helsinki, FI-00014 Helsinki, Finland.
Nieuwdorp M; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Grefhorst A; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
Holleboom AG; Department of (Experimental) Vascular Medicine, Amsterdam University Medical Centers, Location AMC, 1105 AZ Amsterdam, The Netherlands.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 20; Vol. 25 (6). Date of Electronic Publication: 2024 Mar 20.
Typ publikacji:
Journal Article
MeSH Terms:
Fatty Liver*/etiology
Fatty Liver*/genetics
Metabolic Diseases*
Clostridiales*
Male ; Animals ; Mice ; Mice, Inbred C57BL ; Base Composition ; Gluconeogenesis ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA ; Butyrates ; Gene Expression ; Phosphatidate Phosphatase
SCR Organism:
Anaerobutyricum soehngenii
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Defining Porphyromonas gingivalis strains associated with periodontal disease.
Autorzy:
Murugaiyan V; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Utreja S; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Hovey KM; Department of Epidemiology and Environmental Health, School of Public Health and Health Professions, University at Buffalo, Buffalo, NY, USA.
Sun Y; Department of Microbiology and Immunology, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
LaMonte MJ; Department of Epidemiology and Environmental Health, School of Public Health and Health Professions, University at Buffalo, Buffalo, NY, USA.
Wactawski-Wende J; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Diaz PI; UB Microbiome Center, University at Buffalo, Buffalo, NY, USA.; Department of Oral Biology, School of Dental Medicine, University at Buffalo, Buffalo, NY, USA.
Buck MJ; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA. .; Department of Biomedical Informatics, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA. .
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Źródło:
Scientific reports [Sci Rep] 2024 Mar 14; Vol. 14 (1), pp. 6222. Date of Electronic Publication: 2024 Mar 14.
Typ publikacji:
Journal Article
MeSH Terms:
Porphyromonas gingivalis*/genetics
Periodontitis*/microbiology
Humans ; Base Composition ; Sequence Analysis, DNA ; RNA, Ribosomal, 16S/genetics ; Phylogeny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Morinda citrifolia fruit extract enhances the resistance of Penaeus vannamei to Vibrio parahaemolyticus infection.
Autorzy:
Moh JHZ; Curtin Aquaculture Research Lab, Curtin University Malaysia, CDT 250, 98009, Miri, Sarawak, Malaysia.; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.
Okomoda VT; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia. .; Department of Fisheries and Aquaculture, College of Forestry and Fisheries, Joseph Sarwuan Tarka University (Formerly Federal University of Agriculture Makurdi), P.M.B. 2373, Makurdi, Nigeria. .
Mohamad N; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.
Waiho K; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.; Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou, 515063, Guangdong, China.; STU-UMT Joint Shellfish Research Laboratory, Shantou University, Shantou, 515063, Guangdong, China.; Centre for Chemical Biology, Universiti Sains Malaysia, 11900, Minden, Penang, Malaysia.
Noorbaiduri S; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.
Sung YY; Institute of Marine Biotechnology, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.
Manan H; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.
Fazhan H; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia.; STU-UMT Joint Shellfish Research Laboratory, Shantou University, Shantou, 515063, Guangdong, China.
Ma H; Guangdong Provincial Key Laboratory of Marine Biotechnology, Shantou University, Shantou, 515063, Guangdong, China.; STU-UMT Joint Shellfish Research Laboratory, Shantou University, Shantou, 515063, Guangdong, China.
Abualreesh MH; Department of Marine Biology, Faculty of Marine Sciences, King Abdulaziz University, 21589, Jeddah, Saudi Arabia.
Ikhwanuddin M; Institute of Tropical Aquaculture and Fisheries, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu, Malaysia. .; STU-UMT Joint Shellfish Research Laboratory, Shantou University, Shantou, 515063, Guangdong, China. .; Faculty of Fisheries and Marine, Campus C, Airlangga University, Mulyorejo, Surabaya, 60115, Indonesia. .
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Źródło:
Scientific reports [Sci Rep] 2024 Mar 07; Vol. 14 (1), pp. 5668. Date of Electronic Publication: 2024 Mar 07.
Typ publikacji:
Journal Article
MeSH Terms:
Penaeidae*/microbiology
Vibrio parahaemolyticus*
Morinda*
Vibrio Infections*
Animals ; Base Composition ; Fruit ; Methanol/pharmacology ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA ; Plant Extracts/pharmacology ; Immunity, Innate
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
A ubiquitous GC content signature underlies multimodal mRNA regulation by DDX3X.
Autorzy:
Jowhar Z; Department of Cell and Tissue Biology, UCSF, San Francisco, USA.; Medical Scientist Training Program, University of California, San Francisco, San Francisco, CA, 94158, USA.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, 94158, USA.
Xu A; Department of Cell and Tissue Biology, UCSF, San Francisco, USA.; Medical Scientist Training Program, University of California, San Francisco, San Francisco, CA, 94158, USA.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, 94158, USA.
Venkataramanan S; Department of Cell and Tissue Biology, UCSF, San Francisco, USA.
Dossena F; Human Technopole, Milan, Italy.
Hoye ML; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, USA.
Silver DL; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, USA.; Department of Cell Biology, Duke University Medical Center, Durham, USA.; Duke Regeneration Center, Duke University Medical Center, Durham, USA.; Department of Neurobiology, Duke University Medical Center, Durham, USA.; Duke Institute for Brain Sciences, Duke University Medical Center, Durham, USA.
Floor SN; Department of Cell and Tissue Biology, UCSF, San Francisco, USA. .; Helen Diller Family Comprehensive Cancer Center, San Francisco, USA. .
Calviello L; Human Technopole, Milan, Italy. .
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Źródło:
Molecular systems biology [Mol Syst Biol] 2024 Mar; Vol. 20 (3), pp. 276-290. Date of Electronic Publication: 2024 Jan 25.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*
RNA*
Animals ; Mice ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Base Composition ; Cell Cycle/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Fusobacterium nucleatum bacteremia complicated with intracranial Porphyromonas gingivalis and HSV-1 infection: a case report and literature review.
Autorzy:
Wang S; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China.
Tian Y; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China.
Wu Y; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China.
Yu Z; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China.
Zhang J; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China. .
Zhang J; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China. .
Liu S; The Third Central Hospital of Tianjin, Tianjin Key Laboratory of Extracorporeal Life Support for Critical Diseases, Artificial Cell Engineering Technology Research Center, Tianjin Institute of Hepatobiliary Disease, Tianjin, China.
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Źródło:
BMC infectious diseases [BMC Infect Dis] 2024 Feb 20; Vol. 24 (1), pp. 225. Date of Electronic Publication: 2024 Feb 20.
Typ publikacji:
Review; Case Reports; Journal Article
MeSH Terms:
Herpesvirus 1, Human*/genetics
Herpes Simplex*/complications
Herpes Simplex*/diagnosis
Herpes Simplex*/drug therapy
Bacteremia*/complications
Bacteremia*/diagnosis
Bacteremia*/drug therapy
Fusobacterium Infections*/complications
Fusobacterium Infections*/diagnosis
Fusobacterium Infections*/drug therapy
Female ; Humans ; Middle Aged ; Porphyromonas gingivalis ; Fusobacterium nucleatum ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Mitogenomic Characterization and Phylogenetic Placement of African Hind, Cephalopholis taeniops : Shedding Light on the Evolution of Groupers (Serranidae: Epinephelinae).
Autorzy:
Kundu S; Institute of Fisheries Science, Pukyong National University, Busan 48513, Republic of Korea.
Kang HE; Institute of Marine Life Science, Pukyong National University, Busan 48513, Republic of Korea.
Kim AR; Marine Integrated Biomedical Technology Center, National Key Research Institutes in Universities, Pukyong National University, Busan 48513, Republic of Korea.
Lee SR; Marine Integrated Biomedical Technology Center, National Key Research Institutes in Universities, Pukyong National University, Busan 48513, Republic of Korea.
Kim EB; Ocean Georesources Research Department, Korea Institute of Ocean Science and Technology, Busan 49111, Republic of Korea.
Amin MHF; Advance Tropical Biodiversity, Genomics, and Conservation Research Group, Department of Biology, Faculty of Science and Technology, Airlangga University, Surabaya 60115, Indonesia.
Andriyono S; Department of Marine, Faculty of Fisheries and Marine, Airlangga University, Surabaya 60115, Indonesia.
Kim HW; Marine Integrated Biomedical Technology Center, National Key Research Institutes in Universities, Pukyong National University, Busan 48513, Republic of Korea.; Department of Marine Biology, Pukyong National University, Busan 48513, Republic of Korea.
Kang K; International Graduate Program of Fisheries Science, Pukyong National University, Busan 48513, Republic of Korea.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 02; Vol. 25 (3). Date of Electronic Publication: 2024 Feb 02.
Typ publikacji:
Journal Article
MeSH Terms:
Bass*/genetics
Genome, Mitochondrial*
Animals ; Phylogeny ; Bayes Theorem ; Base Composition ; RNA, Transfer/genetics ; RNA, Ribosomal/genetics ; Serine/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Ventilator-associated pneumonia by Weeksella virosa: case report.
Autorzy:
de la Fuente García Peña LA; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico.; High Specialty Regional Hospital B, ISSSTE Veracruz, Veracruz, Mexico.
Mendoza García AU; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico.
Villegas-Dominguez JE; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico. josue_.
Márquez Celedonio FG; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico.
Arana Vidal H; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico.
Azuara Díaz K; Facultad de Medicina, Universidad del Valle de Mexico, Campus Veracruz, Veracruz, Mexico.
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Źródło:
BMC infectious diseases [BMC Infect Dis] 2024 Jan 02; Vol. 24 (1), pp. 6. Date of Electronic Publication: 2024 Jan 02.
Typ publikacji:
Case Reports; Journal Article
MeSH Terms:
Pneumonia, Ventilator-Associated*/diagnosis
Cross Infection*/diagnosis
Adult ; Female ; Child ; Humans ; Middle Aged ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA ; Bacteria, Aerobic
SCR Organism:
Weeksella virosa
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Statistical analysis of synonymous and stop codons in pseudo-random and real sequences as a function of GC content.
Autorzy:
Wesp V; Department of Bioinformatics, Matthias Schleiden Institute, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743, Jena, Germany.
Theißen G; Department of Genetics, Matthias Schleiden Institute, Friedrich Schiller University Jena, Philosophenweg 12, 07743, Jena, Germany.
Schuster S; Department of Bioinformatics, Matthias Schleiden Institute, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743, Jena, Germany. .
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Źródło:
Scientific reports [Sci Rep] 2023 Dec 27; Vol. 13 (1), pp. 22996. Date of Electronic Publication: 2023 Dec 27.
Typ publikacji:
Journal Article
MeSH Terms:
Genetic Code*
Genomics*
Animals ; Codon, Terminator ; Base Composition ; Open Reading Frames/genetics ; Amino Acids
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
GC heterogeneity reveals sequence-structures evolution of angiosperm ITS2.
Autorzy:
Liu Y; Marine College, Shandong University, Weihai, 264209, China.; Division of Physical Biology, CAS Key Laboratory of Interfacial Physics and Technology, Shanghai Institute of Applied Physics, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai, 201800, China.
Liang N; Marine College, Shandong University, Weihai, 264209, China.; Allergy Department, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100730, China.
Xian Q; Marine College, Shandong University, Weihai, 264209, China.
Zhang W; Marine College, Shandong University, Weihai, 264209, China. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2023 Dec 01; Vol. 23 (1), pp. 608. Date of Electronic Publication: 2023 Dec 01.
Typ publikacji:
Journal Article
MeSH Terms:
Magnoliopsida*/genetics
Humans ; Phylogeny ; Gene Conversion ; Base Composition ; RNA ; Evolution, Molecular
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Taxonomic identification and temperature stress tolerance mechanisms of Aequorivita marisscotiae sp. nov.
Autorzy:
Liu W; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.
Cong B; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China. .
Lin J; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.
Liu S; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.
Deng A; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.
Zhao L; First Institute of Oceanography, Ministry of Natural Resources, Qingdao, 266061, China.
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Źródło:
Communications biology [Commun Biol] 2023 Nov 21; Vol. 6 (1), pp. 1186. Date of Electronic Publication: 2023 Nov 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Seawater*
Fatty Acids*/analysis
Temperature ; Base Composition ; Cold Temperature ; Phylogeny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Detection of Clostridium perfringens in donor milk at a human breast milk bank: a case report.
Autorzy:
Liu K; Department of Obstetrics and Gynecology, the First Affiliated Hospital of the Army Medical University, Chongqing, 400000, China.
Liu Z; Clinical Laboratory, the First Affiliated Hospital of the Army Medical University, Chongqing, 400000, China.
Chen X; Department of Obstetrics and Gynecology, the First Affiliated Hospital of the Army Medical University, Chongqing, 400000, China.
Wang R; Department of Obstetrics and Gynecology, the First Affiliated Hospital of the Army Medical University, Chongqing, 400000, China.
Wang D; Department of Obstetrics and Gynecology, the First Affiliated Hospital of the Army Medical University, Chongqing, 400000, China. .
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Źródło:
BMC infectious diseases [BMC Infect Dis] 2023 Nov 17; Vol. 23 (1), pp. 810. Date of Electronic Publication: 2023 Nov 17.
Typ publikacji:
Case Reports; Journal Article
MeSH Terms:
Milk, Human*
Clostridium perfringens*
Humans ; Infant ; Female ; Animals ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA ; Breast Feeding
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Case report: isolated prevotella intermedia causing intracranial infection detected using metagenomic next generation sequencing.
Autorzy:
Ye Z; Department of Neurology, Municipal Hospital Affiliated to the Medical School of Taizhou University, Taizhou, Zhejiang Province, China.
He J; Department of Neurology, Municipal Hospital Affiliated to the Medical School of Taizhou University, Taizhou, Zhejiang Province, China.
Ji H; Department of Neurosurgery, Municipal Hospital Affiliated to the Medical School of Taizhou University, No. 381 of East Zhongshan Road, Jiaojiang District, 318000, Taizhou, Zhejiang Province, China.
Xu H; Department of Neurology, Municipal Hospital Affiliated to the Medical School of Taizhou University, Taizhou, Zhejiang Province, China.
Zhang Y; Department of Neurology, Municipal Hospital Affiliated to the Medical School of Taizhou University, Taizhou, Zhejiang Province, China.
Zhou K; Department of Neurosurgery, Municipal Hospital Affiliated to the Medical School of Taizhou University, No. 381 of East Zhongshan Road, Jiaojiang District, 318000, Taizhou, Zhejiang Province, China. .
Liu H; Department of Neurology, Taiyuan Central Hospital, Shanxi Medical University, No.5, Three lanes East Road, Taiyuan, 030000, Shanxi Province, China. hongwei_.
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Źródło:
BMC neurology [BMC Neurol] 2023 Oct 23; Vol. 23 (1), pp. 383. Date of Electronic Publication: 2023 Oct 23.
Typ publikacji:
Case Reports; Journal Article
MeSH Terms:
High-Throughput Nucleotide Sequencing*
Anti-Bacterial Agents*/therapeutic use
Humans ; Female ; Middle Aged ; Base Composition ; Phylogeny ; Prevotella intermedia/genetics ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Extra-urogenital infection by Mycoplasma hominis in transplant patients: two case reports and literature review.
Autorzy:
Ahamad A; Clinical Laboratory Sciences Program, School of Health Profession, Stony Brook University, Stony Brook, NY, USA. .; Department of Neuroscience and Behavior, Stony Brook University, Stony Brook, NY, USA. .; Department of Pathology, Clinical Microbiology Laboratory, NYU Langone Health, New York, NY, USA. .
Zervou FN; Department of Medicine, NYU Langone Health, New York, NY, USA.
Aguero-Rosenfeld ME; Department of Pathology, Clinical Microbiology Laboratory, NYU Langone Health, New York, NY, USA.; Department of Medicine, NYU Langone Health, New York, NY, USA.
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Źródło:
BMC infectious diseases [BMC Infect Dis] 2023 Sep 14; Vol. 23 (1), pp. 601. Date of Electronic Publication: 2023 Sep 14.
Typ publikacji:
Review; Case Reports; Journal Article
MeSH Terms:
Mycoplasma hominis*
Urinary Tract Infections*
Humans ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Actinomadura graeca sp. nov.: A novel producer of the macrocyclic antibiotic zelkovamycin.
Autorzy:
Tarantini FS; Biodiscovery Institute, School of Pharmacy, University of Nottingham, University Park, Nottingham, United Kingdom.
Brunati M; Fondazione Istituto Insubrico di Ricerca per la Vita (FIIRV), Gerenzano, Italy.
Taravella A; Fondazione Istituto Insubrico di Ricerca per la Vita (FIIRV), Gerenzano, Italy.
Carrano L; Fondazione Istituto Insubrico di Ricerca per la Vita (FIIRV), Gerenzano, Italy.
Parenti F; Fondazione Istituto Insubrico di Ricerca per la Vita (FIIRV), Gerenzano, Italy.
Hong KW; Division of Genetics and Molecular Biology, Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia.; Institute of Marine Sciences, Shantou University, Shantou, China.
Williams P; Biodiscovery Institute, School of Life Sciences, University of Nottingham, University Park, Nottingham, United Kingdom.
Chan KG; Division of Genetics and Molecular Biology, Institute of Biological Sciences, University of Malaya, Kuala Lumpur, Malaysia.; International Genome Centre, Jiangsu University, Zhenjiang, China.
Heeb S; Biodiscovery Institute, School of Life Sciences, University of Nottingham, University Park, Nottingham, United Kingdom.
Chan WC; Biodiscovery Institute, School of Pharmacy, University of Nottingham, University Park, Nottingham, United Kingdom.
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Źródło:
PloS one [PLoS One] 2021 Nov 30; Vol. 16 (11), pp. e0260413. Date of Electronic Publication: 2021 Nov 30 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Actinomadura*/classification
Actinomadura*/genetics
Actinomadura*/metabolism
Actinomadura*/ultrastructure
Antimicrobial Cationic Peptides*/biosynthesis
Antimicrobial Cationic Peptides*/genetics
Base Composition*
Macrocyclic Compounds/*metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome taxonomy of the genus Thalassotalea and proposal of Thalassotalea hakodatensis sp. nov. isolated from sea cucumber larvae.
Autorzy:
Yamano R; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
Yu J; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
Haditomo AHC; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.; Aquaculture Department, Faculty of Fisheries and Marine Sciences, Universitas Diponegoro, Semarang, Indonesia.
Jiang C; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.; Atmosphere and Ocean Research Institute, University of Tokyo, Chiba, Japan.
Mino S; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
Romalde JL; Departamento de Microbiología y Parasitología, CRETUS & CIBUS-Facultad de Biología, Universidade de Santiago de Compostela, Santiago, Spain.
Kang K; Korean Collection for Type Cultures (KCTC), Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup-si, Jeollabuk-do, South Korea.
Sakai Y; Hakodate Fisheries Research, Hokkaido Research Organization, Local Independent Administrative Agency, Hakodate, Japan.
Sawabe T; Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
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Źródło:
PloS one [PLoS One] 2023 Jun 02; Vol. 18 (6), pp. e0286693. Date of Electronic Publication: 2023 Jun 02 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Fatty Acids*
Sea Cucumbers*/genetics
Animals ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Bacterial Typing Techniques ; Base Composition ; Sequence Analysis, DNA ; DNA, Bacterial/genetics ; Ubiquinone/genetics ; Phospholipids
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins.
Autorzy:
Barceló-Antemate D; Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.; Centro de Investigación en Dinámica Celular, Instituto de Investigación en Ciencias Básicas y Aplicadas, Universidad Autónoma del Estado de Morelos (UAEM), Cuernavaca, Morelos, México.
Fontove-Herrera F; C3 Consensus, León, Guanajuato, México.
Santos W; Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
Merino E; Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
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Źródło:
PloS one [PLoS One] 2023 May 04; Vol. 18 (5), pp. e0285201. Date of Electronic Publication: 2023 May 04 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Proteome*/genetics
Amino Acids*/chemistry
Base Composition ; Phylogeny ; Genomics ; Codon/genetics
Czasopismo naukowe
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Tytuł:
Evaluating coverage bias in next-generation sequencing of Escherichia coli.
Autorzy:
Gunasekera S; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.
Abraham S; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.
Stegger M; Statens Serum Institut, Copenhagen, Denmark.
Pang S; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.
Wang P; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.
Sahibzada S; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.
O'Dea M; Antimicrobial Resistance and Infectious Disease Laboratory, Murdoch University, Western Australia, Australia.; Department of Primary Industries and Regional Development, Diagnostic and Laboratory Services, Western Australia, Australia.
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Źródło:
PloS one [PLoS One] 2021 Jun 24; Vol. 16 (6), pp. e0253440. Date of Electronic Publication: 2021 Jun 24 (Print Publication: 2021).
Typ publikacji:
Evaluation Study; Journal Article
MeSH Terms:
Base Composition*
High-Throughput Nucleotide Sequencing*
DNA, Bacterial/*genetics
Escherichia coli/*genetics
Animals ; Columbidae/microbiology ; Escherichia coli/isolation & purification ; Spheniscidae/microbiology ; Whole Genome Sequencing
Czasopismo naukowe
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Tytuł:
Single-cell sequencing of the small and AT-skewed genome of malaria parasites.
Autorzy:
Liu S; Department of Biology, University of Virginia, Charlottesville, VA, USA.
Huckaby AC; Department of Biology, University of Virginia, Charlottesville, VA, USA.
Brown AC; Department of Biology, University of Virginia, Charlottesville, VA, USA.
Moore CC; Division of Infectious Diseases and International Health, University of Virginia, Charlottesville, VA, USA.
Burbulis I; Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA, USA.; Escuela de Medicina, Universidad San Sebastian, Puerto Montt, Chile.
McConnell MJ; Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville, VA, USA.; Department of Neuroscience, University of Virginia School of Medicine, Charlottesville, VA, USA.; Current address: Lieber Institute for Brain Development, Baltimore, MD, USA.
Güler JL; Department of Biology, University of Virginia, Charlottesville, VA, USA. .; Division of Infectious Diseases and International Health, University of Virginia, Charlottesville, VA, USA. .
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Źródło:
Genome medicine [Genome Med] 2021 May 04; Vol. 13 (1), pp. 75. Date of Electronic Publication: 2021 May 04.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Base Composition*
Genome, Protozoan*
Genomics*/methods
High-Throughput Nucleotide Sequencing*
Single-Cell Analysis*/methods
Plasmodium/*genetics
Computational Biology/methods ; DNA Copy Number Variations ; Erythrocytes/parasitology ; Humans ; Malaria/parasitology ; Plasmodium falciparum/genetics ; Polymorphism, Single Nucleotide ; Sequence Analysis, DNA
Czasopismo naukowe
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Tytuł:
Nucleotide spacing distribution analysis for human genome.
Autorzy:
Górski AZ; Polish Academy of Sciences, Institute of Nuclear Physics, Radzikowskiego 152 st, 31-342, Kraków, Poland.
Piwowar M; Jagiellonian University, Collegium Medicum, Kopernika 7E st, 31-034, Kraków, Poland. .
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Źródło:
Mammalian genome : official journal of the International Mammalian Genome Society [Mamm Genome] 2021 Apr; Vol. 32 (2), pp. 123-128. Date of Electronic Publication: 2021 Mar 15.
Typ publikacji:
Journal Article
MeSH Terms:
Base Composition*
Genome, Human*
Genomics*/methods
Nucleotides*
Algorithms ; Humans ; Models, Theoretical
Czasopismo naukowe
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Tytuł:
Human cell-dependent, directional, time-dependent changes in the mono- and oligonucleotide compositions of SARS-CoV-2 genomes.
Autorzy:
Iwasaki Y; Department of Bioscience, Nagahama Institute of Bio-Science and Technology, Shiga, Japan.
Abe T; Graduate School of Science and Technology, Niigata University, Niigata, Japan.
Ikemura T; Department of Bioscience, Nagahama Institute of Bio-Science and Technology, Shiga, Japan. t_.
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Źródło:
BMC microbiology [BMC Microbiol] 2021 Mar 23; Vol. 21 (1), pp. 89. Date of Electronic Publication: 2021 Mar 23.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Base Composition*
Evolution, Molecular*
Genome, Viral*
SARS-CoV-2/*genetics
Animals ; Chiroptera/virology ; Humans ; Oligonucleotides
Czasopismo naukowe
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Tytuł:
Porphyromonas gingivalis induction of TLR2 association with Vinculin enables PI3K activation and immune evasion.
Autorzy:
Pandi K; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
Angabo S; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
Gnanasekaran J; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
Makkawi H; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
Eli-Berchoer L; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
Glaser F; Bioinformatics Knowledge Unit, The Lorry I. Lokey Interdisciplinary Center for Life Sciences and Engineering, Technion-Israel Institute of Technology, Haifa, Israel.
Nussbaum G; Institute of Biomedical and Oral Research, Hebrew University-Hadassah Faculty of Dental Medicine, Jerusalem, Israel.
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Źródło:
PLoS pathogens [PLoS Pathog] 2023 Apr 06; Vol. 19 (4), pp. e1011284. Date of Electronic Publication: 2023 Apr 06 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Porphyromonas gingivalis*/genetics
Toll-Like Receptor 2*/metabolism
Phosphatidylinositol 3-Kinases/genetics ; Phosphatidylinositol 3-Kinases/metabolism ; Immune Evasion ; Vinculin/metabolism ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA
Czasopismo naukowe
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Tytuł:
A Novel D-Psicose 3-Epimerase from Halophilic, Anaerobic Iocasia fonsfrigidae and Its Application in Coconut Water.
Autorzy:
Wulansari S; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Heng S; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Ketbot P; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Baramee S; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Waeonukul R; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Pason P; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Ratanakhanokchai K; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
Uke A; Biological Resources and Post-Harvest Division, International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba 305-8686, Japan.
Kosugi A; Biological Resources and Post-Harvest Division, International Research Center for Agricultural Sciences (JIRCAS), 1-1 Ohwashi, Tsukuba 305-8686, Japan.
Tachaapaikoon C; Division of Biochemical Technology, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.; Excellent Center of Enzyme Technology and Microbial Utilization, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkok 10150, Thailand.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Mar 29; Vol. 24 (7). Date of Electronic Publication: 2023 Mar 29.
Typ publikacji:
Journal Article
MeSH Terms:
Racemases and Epimerases*/genetics
Racemases and Epimerases*/metabolism
Cocos*/metabolism
Anaerobiosis ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S/metabolism ; Sequence Analysis, DNA ; Fructose/metabolism
Czasopismo naukowe
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Tytuł:
Pyrrolidine Dithiocarbamate Suppresses Cutibacterium acnes -Induced Skin Inflammation.
Autorzy:
Shin JH; Department of Molecular Bioscience, College of Biomedical Science, Kangwon National University, Chuncheon 24341, Republic of Korea.
Kim SS; Department of Molecular Bioscience, College of Biomedical Science, Kangwon National University, Chuncheon 24341, Republic of Korea.; Institute of Life Science, Kangwon National University, Chuncheon 24341, Republic of Korea.
Seo SR; Department of Molecular Bioscience, College of Biomedical Science, Kangwon National University, Chuncheon 24341, Republic of Korea.; Institute of Bioscience & Biotechnology, Kangwon National University, Chuncheon 24341, Republic of Korea.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Feb 23; Vol. 24 (5). Date of Electronic Publication: 2023 Feb 23.
Typ publikacji:
Journal Article
MeSH Terms:
Inflammasomes*/metabolism
Dermatitis*
Mice ; Animals ; NLR Family, Pyrin Domain-Containing 3 Protein/metabolism ; Base Composition ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA ; Cytokines/metabolism ; Interleukin-6/genetics ; Inflammation/pathology ; NLR Proteins ; Anti-Inflammatory Agents
Czasopismo naukowe
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Tytuł:
How Many Factors Influence Genomic GC Content Among Prokaryotes?
Autorzy:
Musto H; Laboratorio de Genómica Evolutiva, Departamento de Biología Celular y Molecular, Facultad de Ciencias, Universidad de la República, 11400, Montevideo, Uruguay. .
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Źródło:
Journal of molecular evolution [J Mol Evol] 2023 Feb; Vol. 91 (1), pp. 6-9. Date of Electronic Publication: 2022 Nov 12.
Typ publikacji:
Letter; Research Support, Non-U.S. Gov't
MeSH Terms:
Prokaryotic Cells*
Genomics*
Base Composition ; Genome
Raport
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Pleural empyema by Parvimonas micra in an immunocompetent patient: a case report.
Autorzy:
Vilcarromero S; Servicio de Infectología del Hospital Edgardo Rebagliati Martins, EsSalud, Lima, Perú.
Small M; Servicio de Neumología del Hospital Edgardo Rebagliati Martins, EsSalud, Lima, Perú.
Lizarzaburu A; Servicio de Neumología del Hospital Edgardo Rebagliati Martins, EsSalud, Lima, Perú.
Rivadeneyra-Rodriguez A; Servicio de Odontoestomatologia del Hospital Edgardo Rebagliati Martins, EsSalud, Lima, Perú.
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Transliterated Title:
Empiema pleural por Parvimonas micra en un paciente inmunocompetente: reporte de un caso.
Źródło:
Revista peruana de medicina experimental y salud publica [Rev Peru Med Exp Salud Publica] 2023 Jan-Mar; Vol. 40 (1), pp. 99-104. Date of Electronic Publication: 2023 Jun 23.
Typ publikacji:
Case Reports
MeSH Terms:
Empyema, Pleural*/diagnosis
Humans ; RNA, Ribosomal, 16S ; Base Composition ; Sequence Analysis, DNA ; Phylogeny
SCR Organism:
Parvimonas micra
Raport
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Wyświetlanie 1-25 z 4913

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