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    Tytuł:
    A target enrichment probe set for resolving the flagellate land plant tree of life.
    Autorzy:
    Breinholt JW; RAPiD Genomics Gainesville Florida USA.; Intermountain Healthcare Intermountain Precision Genomics Saint George Utah USA.
    Carey SB; Department of Biology University of Florida Gainesville Florida USA.
    Tiley GP; Department of Biology University of Florida Gainesville Florida USA.; Department of Biology Duke University Durham North Carolina USA.
    Davis EC; Department of Biology University of Florida Gainesville Florida USA.
    Endara L; Department of Biology University of Florida Gainesville Florida USA.
    McDaniel SF; Department of Biology University of Florida Gainesville Florida USA.
    Neves LG; RAPiD Genomics Gainesville Florida USA.
    Sessa EB; Department of Biology University of Florida Gainesville Florida USA.
    von Konrat M; Department of Research and Education The Field Museum Chicago Illinois USA.
    Chantanaorrapint S; Department of Biology Faculty of Science Prince of Songkla University Songkhla Thailand.
    Fawcett S; Pringle Herbarium Department of Plant Biology University of Vermont Burlington Vermont USA.
    Ickert-Bond SM; Department of Wildlife and Biology and UA Museum of the North University of Alaska Fairbanks Fairbanks Alaska USA.
    Labiak PH; Departamento de Botânica Universidade Federal do Paraná Curitiba Paraná Brazil.
    Larraín J; Instituto de Biología Pontificia Universidad Católica de Valparaíso Valparaíso Chile.
    Lehnert M; Department of Geobotany and Botanical Garden Herbarium, Martin Luther University Halle-Wittenberg Halle Germany.
    Lewis LR; Department of Biology University of Florida Gainesville Florida USA.
    Nagalingum NS; California Academy of Sciences San Francisco California USA.
    Patel N; Department of Ecology and Evolutionary Biology University of Connecticut Storrs Connecticut USA.
    Rensing SA; Faculty of Biology University of Marburg Marburg Germany.
    Testo W; Department of Biology University of Florida Gainesville Florida USA.
    Vasco A; Botanical Research Institute of Texas Fort Worth Texas USA.
    Villarreal JC; Department of Biology Laval University Québec City Québec Canada.
    Williams EW; Chicago Botanic Garden Glencoe Illinois USA.
    Burleigh JG; Department of Biology University of Florida Gainesville Florida USA.
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    Źródło:
    Applications in plant sciences [Appl Plant Sci] 2021 Jan 24; Vol. 9 (1), pp. e11406. Date of Electronic Publication: 2021 Jan 24 (Print Publication: 2021).
    Typ publikacji:
    Journal Article
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Phylogenomics resolves major relationships and reveals significant diversification rate shifts in the evolution of silk moths and relatives.
    Autorzy:
    Hamilton CA; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA. .; Department of Entomology, Plant Pathology & Nematology, University of Idaho, Moscow, ID, 83844, USA. .
    St Laurent RA; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA.
    Dexter K; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA.
    Kitching IJ; Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK.
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA.; RAPiD Genomics, 747 SW 2nd Avenue #314, Gainesville, FL, 32601, USA.
    Zwick A; Australian National Insect Collection, CSIRO, Clunies Ross St, Acton, ACT, Canberra, 2601, Australia.
    Timmermans MJTN; Department of Natural Sciences, Middlesex University, The Burroughs, London, NW4 4BT, UK.
    Barber JR; Department of Biological Sciences, Boise State University, Boise, ID, 83725, USA.
    Kawahara AY; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA. .
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    Źródło:
    BMC evolutionary biology [BMC Evol Biol] 2019 Sep 18; Vol. 19 (1), pp. 182. Date of Electronic Publication: 2019 Sep 18.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Genetic Variation*
    Phylogeny*
    Bombyx/*genetics
    Animals ; Base Sequence ; Genetic Loci ; Likelihood Functions
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Anchored phylogenomics illuminates the skipper butterfly tree of life.
    Autorzy:
    Toussaint EFA; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA. .
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA.; RAPiD Genomics 747 SW 2nd Avenue IMB#14, Gainesville, FL, 32601, USA.
    Earl C; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA.
    Warren AD; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA.
    Brower AVZ; Evolution and Ecology Group, Department of Biology, Middle Tennessee State University, Murfreesboro, TN, 37132, USA.
    Yago M; The University Museum, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
    Dexter KM; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA.
    Espeland M; Arthropoda Department, Zoological Research Museum Alexander Koenig, Adenauer Allee 160, 53113, Bonn, Germany.
    Pierce NE; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, 02138, USA.
    Lohman DJ; Biology Department, City College of New York, City University of New York, New York, NY, 10031, USA.; Ph.D. Program in Biology, Graduate Center, City University of New York, New York, NY, 10016, USA.; Entomology Section, National Museum of the Philippines, 1000, Manila, Philippines.
    Kawahara AY; Florida Museum of Natural History, University of Florida, Gainesville, Florida, 32611, USA.
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    Źródło:
    BMC evolutionary biology [BMC Evol Biol] 2018 Jun 19; Vol. 18 (1), pp. 101. Date of Electronic Publication: 2018 Jun 19.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Genomics*
    Phylogeny*
    Butterflies/*classification
    Animals ; Base Sequence ; Butterflies/genetics ; Likelihood Functions ; Species Specificity
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Resolving Relationships among the Megadiverse Butterflies and Moths with a Novel Pipeline for Anchored Phylogenomics.
    Autorzy:
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.; RAPiD Genomics, Gainesville, FL 32601, USA.
    Earl C; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
    Lemmon AR; Department of Scientific Computing.
    Lemmon EM; Department of Biological Science, Florida State University, Tallahassee, FL 32306, USA.
    Xiao L; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
    Kawahara AY; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA.
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    Źródło:
    Systematic biology [Syst Biol] 2018 Jan 01; Vol. 67 (1), pp. 78-93.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Phylogeny*
    Butterflies/*classification
    Classification/*methods
    Moths/*classification
    Animals ; Butterflies/genetics ; Moths/genetics ; Sequence Analysis, DNA
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Evidence for common horizontal transmission of Wolbachia among butterflies and moths.
    Autorzy:
    Ahmed MZ; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA. .
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA.
    Kawahara AY; Florida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA. .
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    Źródło:
    BMC evolutionary biology [BMC Evol Biol] 2016 May 27; Vol. 16 (1), pp. 118. Date of Electronic Publication: 2016 May 27.
    Typ publikacji:
    Journal Article
    MeSH Terms:
    Gene Transfer, Horizontal*
    Butterflies/*microbiology
    Moths/*microbiology
    Wolbachia/*physiology
    Animals ; Biodiversity ; Gene Regulatory Networks ; Genome, Bacterial ; Geography ; Likelihood Functions ; Phylogeny ; Wolbachia/genetics
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms.
    Autorzy:
    Speiser DI; Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA. .; Department of Biological Sciences, University of South Carolina, Columbia, SC, USA. .
    Pankey MS; Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA. .
    Zaharoff AK; Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA. .
    Battelle BA; The Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL, USA. .
    Bracken-Grissom HD; Department of Biological Sciences, Florida International University-Biscayne Bay Campus, North Miami, FL, USA. .
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, FL, USA. .
    Bybee SM; Department of Biology, Brigham Young University, Provo, UT, USA. .
    Cronin TW; Department of Biological Sciences, University of Maryland Baltimore County, Baltimore, MD, USA. .
    Garm A; Department of Biology, Marine Biological Section, University of Copenhagen, Copenhagen, Denmark. .
    Lindgren AR; Department of Biology, Portland State University, Portland, OR, USA. .
    Patel NH; Department of Molecular and Cell Biology & Department of Integrative Biology, University of California, Berkeley, CA, USA. .
    Porter ML; Department of Biology, University of South Dakota, Vermillion, SD, USA. .
    Protas ME; Department of Natural Sciences and Mathematics, Dominican University of California, San Rafael, CA, USA. .
    Rivera AS; Department of Biology, University of the Pacific, Stockton, CA, USA. .
    Serb JM; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, USA. .
    Zigler KS; Department of Biology, Sewanee: The University of the South, Sewanee, TN, USA. .
    Crandall KA; Computational Biology Institute, George Washington University, Ashburn, VA, USA. .; Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA. .
    Oakley TH; Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA. .
    Pokaż więcej
    Źródło:
    BMC bioinformatics [BMC Bioinformatics] 2014 Nov 19; Vol. 15, pp. 350. Date of Electronic Publication: 2014 Nov 19.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Light*
    Phylogeny*
    Transcriptome*
    Molecular Sequence Annotation/*methods
    Vision, Ocular/*genetics
    Algorithms ; Animals ; Eye Proteins/genetics ; Genome ; High-Throughput Nucleotide Sequencing ; Likelihood Functions ; Sequence Analysis, Protein
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    The emergence of lobsters: phylogenetic relationships, morphological evolution and divergence time comparisons of an ancient group (decapoda: achelata, astacidea, glypheidea, polychelida).
    Autorzy:
    Bracken-Grissom HD; Department of Biology, Florida International University, 3000 NE 151st Street, North Miami, FL 33181, USA; .
    Ahyong ST; Australian Museum, 6 College Street, Sydney, NSW 2010, Australia;University of New South Wales, Kensington, NSW 2052, Australia;
    Wilkinson RD; School of Mathematical Sciences, University of Nottingham, Nottingham, UK;
    Feldmann RM; Department of Geology, Kent State University, Kent, OH 44242, USA;
    Schweitzer CE; Kent State University at Stark, 6000 Frank Avenue NW, North Canton, OH 44720, USA;
    Breinholt JW; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA;
    Bendall M; Brigham Young University, 401 WIDB, Provo, UT 84606, USA;
    Palero F; Unitat Mixta Genòmica i Salut CSISP-UV, Institut Cavanilles Universitat de Valencia, C/Catedrático Jose Beltran 2,46980 Paterna, Spain;
    Chan TY; Institute of Marine Biology and Center of Excellence for Marine Bioenvironment and Biotechnology, National Taiwan Ocean University, Keelung 20224, Taiwan, R.O.C.;
    Felder DL; Department of Biology, University of Louisiana at Lafayette, Lafayette, LA 70504, USA;
    Robles R; Laboratory of Bioecology and Crustacean Systematics, Department of Biology, FFCLRP, University of São Paulo (USP), Ave. Bandeirantes 3900, CEP 14040 - 901, Ribeirão Preto, SP Brazil;
    Chu KH; School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong;
    Tsang LM; Institute of Marine Biology and Center of Excellence for Marine Bioenvironment and Biotechnology, National Taiwan Ocean University, Keelung 20224, Taiwan, R.O.C.;School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong;
    Kim D; Brigham Young University, 401 WIDB, Provo, UT 84606, USA;
    Martin JW; Natural History Museum of Los Angeles County, Los Angeles, CA 90007, USA;
    Crandall KA; George Washington University, Computational Biology Institute, Ashburn, VA 20147, USA;
    Pokaż więcej
    Źródło:
    Systematic biology [Syst Biol] 2014 Jul; Vol. 63 (4), pp. 457-79. Date of Electronic Publication: 2014 Feb 20.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Fossils*
    Phylogeny*
    Decapoda/*anatomy & histology
    Decapoda/*classification
    Animals ; Arthropod Proteins/genetics ; Biological Evolution ; Decapoda/genetics ; Time
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Testing phylogenetic hypotheses of the subgenera of the freshwater crayfish genus Cambarus (Decapoda: Cambaridae).
    Autorzy:
    Breinholt JW; Department of Biology, Brigham Young University, Provo, Utah, USA. />Porter ML
    Crandall KA
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    Źródło:
    PloS one [PLoS One] 2012; Vol. 7 (9), pp. e46105. Date of Electronic Publication: 2012 Sep 26.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Phylogeny*
    Astacoidea/*classification
    Astacoidea/*genetics
    Animals ; DNA, Mitochondrial/genetics ; Ecosystem ; Evolution, Molecular ; Fresh Water ; Polymerase Chain Reaction
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Phylogeny and evolutionary patterns in the Dwarf crayfish subfamily (Decapoda: Cambarellinae).
    Autorzy:
    Pedraza-Lara C; Departamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales, CSIC, Madrid, Spain. />Doadrio I
    Breinholt JW
    Crandall KA
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    Źródło:
    PloS one [PLoS One] 2012; Vol. 7 (11), pp. e48233. Date of Electronic Publication: 2012 Nov 14.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Biological Evolution*
    Phylogeny*
    Astacoidea/*genetics
    Animals ; Genetic Speciation ; Mexico
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    An earthworm riddle: systematics and phylogeography of the Spanish lumbricid Postandrilus.
    Autorzy:
    Pérez-Losada M; Centro de Investigação em Biodiversidade e Recursos Genéticos (CIBIO), Universidade do Porto, Campus Agrário de Vairão, Vairão, Portugal. />Breinholt JW
    Porto PG
    Aira M
    Domínguez J
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    Źródło:
    PloS one [PLoS One] 2011; Vol. 6 (11), pp. e28153. Date of Electronic Publication: 2011 Nov 29.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Phylogeny*
    Oligochaeta/*classification
    Oligochaeta/*genetics
    Animals ; Likelihood Functions ; Mediterranean Region ; Molecular Sequence Data ; Paleontology ; Phylogeography ; Spain
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
      Wyświetlanie 1-10 z 10

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