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Wyszukujesz frazę ""Buck-Koehntop, Bethany A."" wg kryterium: Autor


Tytuł :
Poly(ADP-ribose) binding and macroH2A mediate recruitment and functions of KDM5A at DNA lesions.
Autorzy :
Kumbhar R; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Sanchez A; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Perren J; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Gong F; Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, TX.
Corujo D; Cancer and Leukemia Epigenetics and Biology Program, Josep Carreras Leukaemia Cancer Institute, Barcelona, Spain.
Medina F; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Devanathan SK; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Xhemalce B; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.; Livestrong Cancer Institutes, Dell Medical School, The University of Texas at Austin, Austin, TX.
Matouschek A; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.
Buschbeck M; Cancer and Leukemia Epigenetics and Biology Program, Josep Carreras Leukaemia Cancer Institute, Barcelona, Spain.; Program for Predictive and Personalized Medicine of Cancer, Germans Trias i Pujol Research Institute, Badalona, Spain.
Buck-Koehntop BA; Department of Chemistry, University of Utah, Salt Lake City, UT.
Miller KM; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX.; Livestrong Cancer Institutes, Dell Medical School, The University of Texas at Austin, Austin, TX.
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Źródło :
The Journal of cell biology [J Cell Biol] 2021 Jul 05; Vol. 220 (7). Date of Electronic Publication: 2021 May 18.
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Cys 2 His 2 Zinc Finger Methyl-CpG Binding Proteins: Getting a Handle on Methylated DNA.
Autorzy :
Hodges AJ; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT, 84112, USA.
Hudson NO; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT, 84112, USA.
Buck-Koehntop BA; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT, 84112, USA. Electronic address: koehntop@chem.utah.edu.
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Źródło :
Journal of molecular biology [J Mol Biol] 2019 Oct 16. Date of Electronic Publication: 2019 Oct 16.
Typ publikacji :
Journal Article; Review
Czasopismo naukowe
Tytuł :
Structural insights into methylated DNA recognition by the C-terminal zinc fingers of the DNA reader protein ZBTB38.
Autorzy :
Hudson NO; From the Departments of Chemistry and.
Whitby FG; Biochemistry, University of Utah, Salt Lake City, Utah 84112.
Buck-Koehntop BA; From the Departments of Chemistry and koehntop@chem.utah.edu.
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Źródło :
The Journal of biological chemistry [J Biol Chem] 2018 Dec 21; Vol. 293 (51), pp. 19835-19843. Date of Electronic Publication: 2018 Oct 24.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
DNA Methylation*
Zinc Fingers*
DNA/*genetics
DNA/*metabolism
Repressor Proteins/*chemistry
Repressor Proteins/*metabolism
Amino Acid Sequence ; DNA/chemistry ; DNA Contamination ; Humans ; Models, Molecular ; Protein Binding
Czasopismo naukowe
Tytuł :
Zinc Finger Readers of Methylated DNA.
Autorzy :
Hudson NO; Department of Chemistry, University of Utah, Salt Lake City, UT 84112-0850, USA. .
Buck-Koehntop BA; Department of Chemistry, University of Utah, Salt Lake City, UT 84112-0850, USA. koehntop@chem.utah.edu.
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Źródło :
Molecules (Basel, Switzerland) [Molecules] 2018 Oct 07; Vol. 23 (10). Date of Electronic Publication: 2018 Oct 07.
Typ publikacji :
Journal Article; Review
MeSH Terms :
Epigenesis, Genetic*
DNA Methylation/*genetics
DNA-Binding Proteins/*genetics
Zinc Fingers/*genetics
CpG Islands/genetics ; DNA-Binding Proteins/chemistry ; Humans ; Signal Transduction ; Transcription Factors/chemistry ; Transcription Factors/genetics
Czasopismo naukowe
Tytuł :
A Protein-Capsid-Based System for Cell Delivery of Selenocysteine.
Autorzy :
Wang S; School of Pharmaceutical Science and Technology , Tianjin University , 92 Weijin Road , Nankai District, Tianjin 300072 , China.
Al-Soodani AT; Department of Chemistry , University of Utah , 315 South 1400 East , Salt Lake City , Utah 84112 , United States.
Thomas GC; Department of Chemistry , University of Utah , 315 South 1400 East , Salt Lake City , Utah 84112 , United States.
Buck-Koehntop BA; Department of Chemistry , University of Utah , 315 South 1400 East , Salt Lake City , Utah 84112 , United States.
Woycechowsky KJ; School of Pharmaceutical Science and Technology , Tianjin University , 92 Weijin Road , Nankai District, Tianjin 300072 , China.; Department of Chemistry , University of Utah , 315 South 1400 East , Salt Lake City , Utah 84112 , United States.
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Źródło :
Bioconjugate chemistry [Bioconjug Chem] 2018 Jul 18; Vol. 29 (7), pp. 2332-2342. Date of Electronic Publication: 2018 Jun 28.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Capsid/*chemistry
Drug Delivery Systems/*methods
Selenocysteine/*administration & dosage
Antineoplastic Agents/administration & dosage ; Antineoplastic Agents/pharmacokinetics ; Biological Transport ; Cell Line ; Cell Membrane Permeability ; Cysteine ; Drug Carriers/chemistry ; Drug Liberation ; Humans ; Multienzyme Complexes/genetics ; Protein Engineering/methods ; Selenocysteine/pharmacokinetics
Czasopismo naukowe
Tytuł :
The C-Terminal Zinc Fingers of ZBTB38 are Novel Selective Readers of DNA Methylation.
Autorzy :
Pozner A; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States.
Hudson NO; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States.
Trewhella J; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States; School of Life and Environmental Sciences, The University of Sydney, NSW 2006, Australia.
Terooatea TW; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States.
Miller SA; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States.
Buck-Koehntop BA; Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, UT 84112, United States. Electronic address: koehntop@chem.utah.edu.
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Źródło :
Journal of molecular biology [J Mol Biol] 2018 Feb 02; Vol. 430 (3), pp. 258-271. Date of Electronic Publication: 2017 Dec 27.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA Methylation*
Zinc Fingers*
DNA/*metabolism
Repressor Proteins/*metabolism
Amino Acid Sequence ; CpG Islands ; DNA/chemistry ; Humans ; Molecular Docking Simulation ; Protein Binding ; Repressor Proteins/chemistry
Czasopismo naukowe
Tytuł :
PAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyond.
Autorzy :
Terooatea TW; Department of Chemistry, University of Utah, Salt Lake City, UT 84112, USA.
Pozner A; Department of Chemistry, University of Utah, Salt Lake City, UT 84112, USA.
Buck-Koehntop BA; Department of Chemistry, University of Utah, Salt Lake City, UT 84112, USA koehntop@chem.utah.edu.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2016 Dec 01; Vol. 44 (21), pp. e159. Date of Electronic Publication: 2016 Aug 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms :
Biochemistry/*methods
Chromatin Immunoprecipitation/*methods
High-Throughput Nucleotide Sequencing/*methods
CCCTC-Binding Factor ; Chromatin/chemistry ; Computational Biology/methods ; HeLa Cells ; Humans ; Proteins/chemistry ; Proteins/genetics ; RNA Interference ; Repressor Proteins/metabolism
Czasopismo naukowe
Tytuł :
Cell-specific Kaiso (ZBTB33) Regulation of Cell Cycle through Cyclin D1 and Cyclin E1.
Autorzy :
Pozner A; From the Department of Chemistry, University of Utah, Salt Lake City, Utah 84112.
Terooatea TW; From the Department of Chemistry, University of Utah, Salt Lake City, Utah 84112.
Buck-Koehntop BA; From the Department of Chemistry, University of Utah, Salt Lake City, Utah 84112. Electronic address: koehntop@chem.utah.edu.
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Źródło :
The Journal of biological chemistry [J Biol Chem] 2016 Nov 18; Vol. 291 (47), pp. 24538-24550. Date of Electronic Publication: 2016 Sep 30.
Typ publikacji :
Journal Article
MeSH Terms :
Cyclin D1/*metabolism
Cyclin E/*metabolism
G1 Phase/*physiology
Oncogene Proteins/*metabolism
Response Elements/*physiology
Signal Transduction/*physiology
Transcription Factors/*metabolism
Cyclin D1/genetics ; Cyclin E/genetics ; E2F Transcription Factors/genetics ; E2F Transcription Factors/metabolism ; HEK293 Cells ; HeLa Cells ; Humans ; Oncogene Proteins/genetics ; Phosphorylation/physiology ; Retinoblastoma Protein/genetics ; Retinoblastoma Protein/metabolism ; Transcription Factors/genetics
Czasopismo naukowe
Tytuł :
On how mammalian transcription factors recognize methylated DNA.
Autorzy :
Buck-Koehntop BA; Department of Chemistry, University of Utah, Salt Lake City, UT, USA. koehntop@chem.utah.edu
Defossez PA
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Źródło :
Epigenetics [Epigenetics] 2013 Feb; Vol. 8 (2), pp. 131-7. Date of Electronic Publication: 2013 Jan 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
DNA Methylation*
DNA-Binding Proteins/*chemistry
DNA-Binding Proteins/*metabolism
Mammals/*genetics
Transcription Factors/*metabolism
Animals ; Cation Transport Proteins/genetics ; Cation Transport Proteins/metabolism ; CpG Islands ; DNA-Binding Proteins/genetics ; Humans ; Mammals/metabolism ; Protein Interaction Domains and Motifs ; Transcription Factors/chemistry ; Transcription Factors/genetics ; Zinc Fingers
Czasopismo naukowe
Tytuł :
Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso.
Autorzy :
Buck-Koehntop BA; Department of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Stanfield RL
Ekiert DC
Martinez-Yamout MA
Dyson HJ
Wilson IA
Wright PE
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2012 Sep 18; Vol. 109 (38), pp. 15229-34. Date of Electronic Publication: 2012 Sep 04.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Transcription Factors/*chemistry
Base Sequence ; Cadherins/chemistry ; Chromatin/chemistry ; CpG Islands ; Crystallography, X-Ray/methods ; DNA/chemistry ; DNA Methylation ; Humans ; Hydrogen-Ion Concentration ; Magnetic Resonance Spectroscopy/methods ; Molecular Conformation ; Molecular Sequence Data ; Promoter Regions, Genetic ; Protein Binding ; Protein Folding ; Protein Structure, Tertiary ; Transcription Factors/genetics ; Zinc Fingers
Czasopismo naukowe
Tytuł :
Kaiso uses all three zinc fingers and adjacent sequence motifs for high affinity binding to sequence-specific and methyl-CpG DNA targets.
Autorzy :
Buck-Koehntop BA; Department of Molecular Biology, The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Martinez-Yamout MA
Dyson HJ
Wright PE
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Źródło :
FEBS letters [FEBS Lett] 2012 Mar 23; Vol. 586 (6), pp. 734-9. Date of Electronic Publication: 2012 Jan 30.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
CpG Islands*
DNA/*genetics
DNA/*metabolism
Transcription Factors/*metabolism
Zinc Fingers/*genetics
Amino Acid Sequence ; Animals ; Base Sequence ; DNA/chemistry ; Humans ; Molecular Sequence Data ; Nuclear Magnetic Resonance, Biomolecular/methods ; Protein Binding ; Sequence Alignment ; Transcription Factors/genetics
Czasopismo naukowe
Tytuł :
Pseudoenzymatic dealkylation of alkyltins by biological dithiols.
Autorzy :
Porcelli F; Department of Environmental Science, University of Tuscia, 01100 Viterbo, Italy.
Triggiani D
Buck-Koehntop BA
Masterson LR
Veglia G
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Źródło :
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry [J Biol Inorg Chem] 2009 Nov; Vol. 14 (8), pp. 1219-25. Date of Electronic Publication: 2009 Jul 21.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Organotin Compounds/*chemistry
Peptides/*chemistry
Tin/*chemistry
Toluene/*analogs & derivatives
Animals ; Dealkylation ; Humans ; Molecular Structure ; Neuropeptides/chemistry ; Neuropeptides/genetics ; Organotin Compounds/toxicity ; Peptides/genetics ; Spectrometry, Fluorescence ; Spectrometry, Mass, Electrospray Ionization ; Toluene/chemistry
Czasopismo naukowe

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