Temat: "CHROMOSOMES" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness.
Autorzy:: Chowdhury HMAM; Department of Computer Science, University of Colorado at Colorado Springs, 1420 Austin Bluffs Pkwy, Colorado Springs, CO, 80918, USA.
Boult T; Department of Computer Science, University of Colorado at Colorado Springs, 1420 Austin Bluffs Pkwy, Colorado Springs, CO, 80918, USA.
Oluwadare O; Department of Computer Science, University of Colorado at Colorado Springs, 1420 Austin Bluffs Pkwy, Colorado Springs, CO, 80918, USA. .; Department of Biomedical Informatics, University of Colorado Anschutz Medical Campus, Aurora, CO, USA. .; Pokaż więcej
Źródło:: BMC bioinformatics [BMC Bioinformatics] 2024 Mar 21; Vol. 25 (1), pp. 123. Date of Electronic Publication: 2024 Mar 21.
Typ publikacji:: Journal Article
MeSH Terms:: Chromatin*/genetics
Chromosomes*
DNA ; Chromatin Immunoprecipitation Sequencing ; Algorithms

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Skocz do pozycji: 2.

Tytuł:: Chromosomes of Asian cyprinid fishes: Novel insight into the chromosomal evolution of Labeoninae (Teleostei, Cyprinidae).
Autorzy:: Khensuwan S; Department of Biology, Faculty of Science, Khon Kaen University, Muang, Khon Kaen, Thailand.
de Menezes Cavalcante Sassi F; Departamento de Genética e Evolução, Laboratório de Citogenética de Peixes, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.
Rosa de Moraes RL; Departamento de Genética e Evolução, Laboratório de Citogenética de Peixes, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.
Rab P; Institute of Animal Physiology and Genetics, Laboratory of Fish Genetics, Czech Academy of Sciences, Rumburská, Liběchov, Czech Republic.
Liehr T; Institute of Human Genetics, University Hospital Jena, Jena, Germany.
Supiwong W; Faculty of Interdisciplinary Studies, Khon Kaen University, Nong Khai Campus, Muang, Nong Khai, Thailand.
Seetapan K; School of Agriculture and Natural Resources, University of Phayao, Tumbol Maeka, Muang, Phayao, Thailand.
Tanomtong A; Department of Biology, Faculty of Science, Khon Kaen University, Muang, Khon Kaen, Thailand.
Tantisuwichwong N; Department of Biology, Faculty of Science, Khon Kaen University, Muang, Khon Kaen, Thailand.
Arunsang S; Program in Animal Science, Faculty of Agricultural Technology and Agro-Industry, Rajamangala University of Technology Suvarnabhumi, Phra Nakhon Si Ayutthaya, Ayutthaya, Thailand.
Buasriyot P; Faculty of Science and Technology, Rajamangala University of Technology Suvarnabhumi, Mueang Nonthaburi, Nonthaburi, Thailand.
Tongnunui S; Department of Conservation Biology, Mahidol University, Kanchanburi Campus, Sai Yok, Kanchanaburi Province, Thailand.
Cioffi MB; Departamento de Genética e Evolução, Laboratório de Citogenética de Peixes, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2024 Feb 07; Vol. 19 (2), pp. e0292689. Date of Electronic Publication: 2024 Feb 07 (Print Publication: 2024).
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*/genetics
Cyprinidae*/genetics
Animals ; Phylogeny ; Karyotype ; Chromosome Aberrations ; DNA, Ribosomal/genetics ; Thailand ; Evolution, Molecular

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Skocz do pozycji: 3.

Tytuł:: Irreproducible results and unsupported conclusions in Ahmad et al. [BMC genomics (2020) 21:656].
Autorzy:: Ruiz-Ruano FJ; School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TU, UK.; Department of Organismal Biology - Systematic Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, SE-752 36, Sweden.; Centre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Adenauerallee 127, 53113, Bonn, Germany.
Camacho JPM; Departamento de Genética, Universidad de Granada, Granada, 18071, Spain. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2023 Dec 18; Vol. 24 (1), pp. 778. Date of Electronic Publication: 2023 Dec 18.
Typ publikacji:: Journal Article; Comment
MeSH Terms:: Genomics*/methods
Chromosomes*
Biological Evolution

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Skocz do pozycji: 4.

Tytuł:: An in silico procedure for generating protein-mediated chromatin interaction data and comparison of significant interaction calling methods.
Autorzy:: Lou S; Interdisciplinary Ph.D. Program in Biostatistics, The Ohio State University, Columbus, OH, United States of America.
Lin S; Interdisciplinary Ph.D. Program in Biostatistics, The Ohio State University, Columbus, OH, United States of America.; Department of Statistics, The Ohio State University, Columbus, OH, United States of America.; Translational Data Analytics Institute, The Ohio State University, Columbus, OH, United States of America.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2024 Jan 17; Vol. 19 (1), pp. e0287521. Date of Electronic Publication: 2024 Jan 17 (Print Publication: 2024).
Typ publikacji:: Journal Article
MeSH Terms:: Chromatin*
Chromosomes*
Sequence Analysis, DNA/methods ; Computer Simulation ; Chromatin Immunoprecipitation Sequencing

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na półce

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Skocz do pozycji: 5.

Tytuł:: 4D nucleome equation predicts gene expression controlled by long-range enhancer-promoter interaction.
Autorzy:: Wang Z; Guangdong Province Key Laboratory of Computational, Sun Yat-sen University, Guangzhou, People's Republic of China.; School of Mathematics, Sun Yat-Sen University, Guangzhou, People's Republic of China.
Luo S; Guangdong Province Key Laboratory of Computational, Sun Yat-sen University, Guangzhou, People's Republic of China.; School of Mathematics, Sun Yat-Sen University, Guangzhou, People's Republic of China.
Zhang Z; Guangdong Province Key Laboratory of Computational, Sun Yat-sen University, Guangzhou, People's Republic of China.; School of Mathematics, Sun Yat-Sen University, Guangzhou, People's Republic of China.
Zhou T; Guangdong Province Key Laboratory of Computational, Sun Yat-sen University, Guangzhou, People's Republic of China.; School of Mathematics, Sun Yat-Sen University, Guangzhou, People's Republic of China.
Zhang J; Guangdong Province Key Laboratory of Computational, Sun Yat-sen University, Guangzhou, People's Republic of China.; School of Mathematics, Sun Yat-Sen University, Guangzhou, People's Republic of China.; Pokaż więcej
Źródło:: PLoS computational biology [PLoS Comput Biol] 2023 Dec 18; Vol. 19 (12), pp. e1011722. Date of Electronic Publication: 2023 Dec 18 (Print Publication: 2023).
Typ publikacji:: Journal Article
MeSH Terms:: Chromatin*/genetics
Chromosomes*
Animals ; Mice ; Promoter Regions, Genetic/genetics ; RNA, Messenger/genetics ; Gene Expression ; Enhancer Elements, Genetic/genetics

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na półce

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Skocz do pozycji: 6.

Tytuł:: Transcription induces context-dependent remodeling of chromatin architecture during differentiation.
Autorzy:: Chahar S; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Ben Zouari Y; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Salari H; Laboratoire de Biologie et Modélisation de la Cellule, École Normale Supérieure de Lyon, CNRS, UMR5239, Inserm U1293, Université Claude Bernard Lyon 1, Lyon, France.
Kobi D; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Maroquenne M; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Erb C; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Molitor AM; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Mossler A; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Karasu N; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.
Jost D; Laboratoire de Biologie et Modélisation de la Cellule, École Normale Supérieure de Lyon, CNRS, UMR5239, Inserm U1293, Université Claude Bernard Lyon 1, Lyon, France.
Sexton T; University of Strasbourg, CNRS, Inserm, IGBMC UMR 7104-UMR-S 1258, Illkirch, France.; Pokaż więcej
Źródło:: PLoS biology [PLoS Biol] 2023 Dec 04; Vol. 21 (12), pp. e3002424. Date of Electronic Publication: 2023 Dec 04 (Print Publication: 2023).
Typ publikacji:: Journal Article
MeSH Terms:: Chromatin*/genetics
Chromosomes*/metabolism
Animals ; Mice ; Transcription, Genetic ; Cell Differentiation/genetics ; Genome ; Chromatin Assembly and Disassembly ; CCCTC-Binding Factor/genetics

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Skocz do pozycji: 7.

Tytuł:: Design principles of 3D epigenetic memory systems.
Autorzy:: Owen JA; Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA.
Osmanović D; Department of Mechanical and Aeronautical Engineering, UCLA, Los Angeles, CA, USA.
Mirny L; Department of Physics, Massachusetts Institute of Technology, Cambridge, MA, USA.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2023 Nov 17; Vol. 382 (6672), pp. eadg3053. Date of Electronic Publication: 2023 Nov 17.
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*/metabolism
Epigenetic Memory*
Genome*
Imaging, Three-Dimensional*
Computer Simulation*
Chromatin ; Histones/metabolism

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Skocz do pozycji: 8.

Tytuł:: Identifying quantitatively differential chromosomal compartmentalization changes and their biological significance from Hi-C data using DARIC.
Autorzy:: Kai Y; Cancer and Blood Disorders Center, Boston Children's Hospital and Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02115, USA.
Liu N; Bone Marrow Transplantation Center of the First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, 310003, China.; Liangzhu Laboratory, Zhejiang University Medical Center, Hangzhou, 311121, China.
Orkin SH; Cancer and Blood Disorders Center, Boston Children's Hospital and Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02115, USA. Stuart_.; Howards Hughes Medical Institute, Boston, MA, 02115, USA. Stuart_.
Yuan GC; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, Charles Bronfman Institute for Precision Medicine, New York, NY, 10029, USA. .; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2023 Oct 13; Vol. 24 (1), pp. 614. Date of Electronic Publication: 2023 Oct 13.
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*
Chromatin*/genetics
Humans ; Genome, Human ; Gene Expression Regulation ; Genomics

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Skocz do pozycji: 9.

Tytuł:: Chromosomal-level reference genome of a wild North American mallard (Anas platyrhynchos).
Autorzy:: Lavretsky P; Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968, USA.
Hernández F; Department of Biological Sciences, University of Texas at El Paso, El Paso, TX 79968, USA.
Swale T; Cantata Bio, 100 Enterprise Way Suite A101, Scotts Valley, CA 95066.
Mohl JE; Department of Mathematical Sciences, University of Texas at El Paso, El Paso, TX 79968, USA.; Pokaż więcej
Źródło:: G3 (Bethesda, Md.) [G3 (Bethesda)] 2023 Sep 30; Vol. 13 (10).
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:: Genome*
Chromosomes*
Animals ; Humans ; Ducks/genetics ; North America

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Skocz do pozycji: 10.

Tytuł:: Mapping robust multiscale communities in chromosome contact networks.
Autorzy:: Holmgren A; Integrated Science Lab, Department of Physics, Umeå University, Umeå, Sweden.
Bernenko D; Integrated Science Lab, Department of Physics, Umeå University, Umeå, Sweden.
Lizana L; Integrated Science Lab, Department of Physics, Umeå University, Umeå, Sweden. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2023 Aug 10; Vol. 13 (1), pp. 12979. Date of Electronic Publication: 2023 Aug 10.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosomes*/genetics
Genome*
Humans ; Cell Nucleus ; Computational Biology/methods ; DNA ; Chromatin

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Skocz do pozycji: 11.

Tytuł:: High-quality haploid genomes corroborate 29 chromosomes and highly conserved synteny of genes in Hyles hawkmoths (Lepidoptera: Sphingidae).
Autorzy:: Hundsdoerfer AK; Senckenberg Natural History Collections Dresden, Königsbrücker Landstr. 159, 01109, Dresden, Germany. .
Schell T; LOEWE-Centre for Translational Biodiversity Genomics (LOEWE-TBG), Frankfurt Am Main, Germany.
Patzold F; Senckenberg Natural History Collections Dresden, Königsbrücker Landstr. 159, 01109, Dresden, Germany.
Wright CJ; Tree of Life, Wellcome Sanger Institute, Cambridge, CB10 1SA, UK.
Yoshido A; Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 370 05, České Budějovice, Czech Republic.
Marec F; Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 370 05, České Budějovice, Czech Republic.
Daneck H; Senckenberg Natural History Collections Dresden, Königsbrücker Landstr. 159, 01109, Dresden, Germany.
Winkler S; Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307, Dresden, Germany.
Greve C; LOEWE-Centre for Translational Biodiversity Genomics (LOEWE-TBG), Frankfurt Am Main, Germany.
Podsiadlowski L; Centre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Adenauerallee 127, 53113, Bonn, Germany.
Hiller M; LOEWE-Centre for Translational Biodiversity Genomics (LOEWE-TBG), Frankfurt Am Main, Germany.
Pippel M; Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307, Dresden, Germany.; Center for Systems Biology Dresden, Pfotenhauerstr. 108, 01307, Dresden, Germany.; Department of Cell and Molecular Biology, Uppsala University, Husargatan 3, Uppsala, 751 23, Sweden.; Pokaż więcej
Źródło:: BMC genomics [BMC Genomics] 2023 Aug 07; Vol. 24 (1), pp. 443. Date of Electronic Publication: 2023 Aug 07.
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*
Moths*/genetics
Animals ; Female ; Male ; Synteny ; Haploidy ; Phylogeny ; Karyotype

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Skocz do pozycji: 12.

Tytuł:: Emergence of linkage between cooperative RNA replicators encoding replication and metabolic enzymes through experimental evolution.
Autorzy:: Ueda K; Department of Life Science, Graduate School of Arts and Science, the University of Tokyo, Meguro, Tokyo, Japan.
Mizuuchi R; Department of Electrical Engineering and Bioscience, Faculty of Science and Engineering, Waseda University, Shinjuku, Tokyo, Japan.; JST, FOREST, Kawaguchi, Saitama, Japan.
Ichihashi N; Department of Life Science, Graduate School of Arts and Science, the University of Tokyo, Meguro, Tokyo, Japan.; Komaba Institute for Science, the University of Tokyo, Meguro, Tokyo, Japan.; Universal Biology Institute, the University of Tokyo, Meguro, Tokyo, Japan.; Pokaż więcej
Źródło:: PLoS genetics [PLoS Genet] 2023 Aug 04; Vol. 19 (8), pp. e1010471. Date of Electronic Publication: 2023 Aug 04 (Print Publication: 2023).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: RNA*/genetics
Chromosomes*
Mutation ; Evolution, Molecular

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Skocz do pozycji: 13.

Tytuł:: Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters.
Autorzy:: Stefanova ME; Development and Disease Research Group, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany.; Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, 13353 Berlin, Germany.
Ing-Simmons E; MRC London Institute of Medical Sciences, Du Cane Road, London W12 0NN, UK.; Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Stefanov S; Berlin Institute for Molecular and Systems Biology, Max Delbrück Center for Molecular Medicine, 13125 Berlin, Germany.; Department of Biology, Chemistry, and Pharmacology, Institute of Biochemistry, Freie Universität Berlin, 14163 Berlin, Germany.
Flyamer I; Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland.
Dorado Garcia H; Experimental and Clinical Research Center (ECRC) of the MDC and Charité Berlin, 13125 Berlin, Germany.; Department of Pediatric Oncology and Hematology, Charité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, 13353 Berlin, Germany.; Max Delbrück Center for Molecular Medicine, 13125 Berlin, Germany.
Schöpflin R; Development and Disease Research Group, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany.; Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, 13353 Berlin, Germany.
Henssen AG; Experimental and Clinical Research Center (ECRC) of the MDC and Charité Berlin, 13125 Berlin, Germany.; Department of Pediatric Oncology and Hematology, Charité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, 13353 Berlin, Germany.; Max Delbrück Center for Molecular Medicine, 13125 Berlin, Germany.; German Cancer Consortium (DKTK), Partner Site Berlin, and German Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.
Vaquerizas JM; MRC London Institute of Medical Sciences, Du Cane Road, London W12 0NN, UK.; Institute of Clinical Sciences, Faculty of Medicine, Imperial College London, London SW7 2AZ, UK.
Mundlos S; Development and Disease Research Group, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany.; Institute for Medical and Human Genetics, Charité-Universitätsmedizin Berlin, 13353 Berlin, Germany.; Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany.; Pokaż więcej
Źródło:: Cells [Cells] 2023 Aug 04; Vol. 12 (15). Date of Electronic Publication: 2023 Aug 04.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromatin*
Chromosomes*/metabolism
Humans ; CCCTC-Binding Factor/genetics ; Binding Sites ; Doxorubicin/pharmacology

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Skocz do pozycji: 14.

Tytuł:: Assignment of the somatic A/B compartments to chromatin domains in giant transcriptionally active lampbrush chromosomes.
Autorzy:: Krasikova A; Saint-Petersburg State University, Saint-Petersburg, Russia. .
Kulikova T; Saint-Petersburg State University, Saint-Petersburg, Russia.
Rodriguez Ramos JS; Saint-Petersburg State University, Saint-Petersburg, Russia.
Maslova A; Saint-Petersburg State University, Saint-Petersburg, Russia.; Pokaż więcej
Źródło:: Epigenetics & chromatin [Epigenetics Chromatin] 2023 Jun 15; Vol. 16 (1), pp. 24. Date of Electronic Publication: 2023 Jun 15.
Typ publikacji:: Journal Article
MeSH Terms:: Chromatin*/genetics
Chromosomes*/genetics
Animals ; Cell Nucleus ; Chickens ; Oocytes

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Skocz do pozycji: 15.

Tytuł:: Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome.
Autorzy:: Brückner DB; Institute of Science and Technology, Am Campus 1, Klosterneuburg, Austria.
Chen H; School of Life Science and Technology, ShanghaiTech University, Shanghai, China.; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Barinov L; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.; Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Zoller B; Joseph Henry Laboratories of Physics, Princeton University, Princeton, NJ, USA.; Department of Developmental and Stem Cell Biology, CNRS UMR3738 Paris Cité, Institut Pasteur, Paris, France.
Gregor T; Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.; Joseph Henry Laboratories of Physics, Princeton University, Princeton, NJ, USA.; Department of Developmental and Stem Cell Biology, CNRS UMR3738 Paris Cité, Institut Pasteur, Paris, France.; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2023 Jun 30; Vol. 380 (6652), pp. 1357-1362. Date of Electronic Publication: 2023 Jun 29.
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*/chemistry
Chromosomes*/genetics
DNA*/chemistry
DNA*/genetics
Transcription, Genetic*
Molecular Imaging*/methods
Enhancer Elements, Genetic*
Promoter Regions, Genetic*
Cell Nucleus/metabolism ; Eukaryota ; Polymers/chemistry ; Animals ; Drosophila

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Skocz do pozycji: 16.

Tytuł:: Enhanced performance of gene expression predictive models with protein-mediated spatial chromatin interactions.
Autorzy:: Chiliński M; Laboratory of Bioinformatics and Computational Genomics, Faculty of Mathematics and Information Science, Warsaw University of Technology, 00-662, Warsaw, Poland.; Laboratory of Functional and Structural Genomics, Centre of New Technologies, University of Warsaw, 02-097, Warsaw, Poland.
Lipiński J; Cellular Genomics, Warsaw, Poland.
Agarwal A; Laboratory of Functional and Structural Genomics, Centre of New Technologies, University of Warsaw, 02-097, Warsaw, Poland.
Ruan Y; The Jackson Laboratory for Genomic Medicine, 10 Discovery Drive, Farmington, CT, 06030, USA.; Life Sciences Institute, Zhejiang University, Zhejiang, Hangzhou, China.
Plewczynski D; Laboratory of Bioinformatics and Computational Genomics, Faculty of Mathematics and Information Science, Warsaw University of Technology, 00-662, Warsaw, Poland. .; Laboratory of Functional and Structural Genomics, Centre of New Technologies, University of Warsaw, 02-097, Warsaw, Poland. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2023 Jul 20; Vol. 13 (1), pp. 11693. Date of Electronic Publication: 2023 Jul 20.
Typ publikacji:: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromatin*/genetics
Chromosomes*/metabolism
CCCTC-Binding Factor/genetics ; Cell Nucleus/metabolism ; Cell Cycle Proteins/metabolism ; Gene Expression

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Skocz do pozycji: 17.

Tytuł:: Mapping the semi-nested community structure of 3D chromosome contact networks.
Autorzy:: Bernenko D; Department of Physics, Integrated Science Lab, Umeå University, Umeå, Sweden.
Lee SH; Department of Physics and Research Institute of Natural Science, Gyeongsang National University, Jinju, Korea.; Future Convergence Technology Research Institute, Gyeongsang National University, Jinju, Korea.
Stenberg P; Department of Ecology and Environmental Science, Umeå University, Umeå, Sweden.
Lizana L; Department of Physics, Integrated Science Lab, Umeå University, Umeå, Sweden.; Pokaż więcej
Źródło:: PLoS computational biology [PLoS Comput Biol] 2023 Jul 11; Vol. 19 (7), pp. e1011185. Date of Electronic Publication: 2023 Jul 11 (Print Publication: 2023).
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromosomes*/genetics
Chromatin*/genetics
Animals ; DNA/genetics ; Chromatin Assembly and Disassembly ; Epigenesis, Genetic ; Mammals/genetics

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Skocz do pozycji: 18.

Tytuł:: Induction of the Erythroid Differentiation of K562 Cells Is Coupled with Changes in the Inter-Chromosomal Contacts of rDNA Clusters.
Autorzy:: Tchurikov NA; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Klushevskaya ES; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Alembekov IR; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Kretova AN; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Chechetkin VR; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Kravatskaya GI; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Kravatsky YV; Department of Epigenetic Mechanisms of Gene Expression Regulation, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Engelhardt Institute of Molecular Biology Russian Academy of Sciences, 119334 Moscow, Russia.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2023 Jun 07; Vol. 24 (12). Date of Electronic Publication: 2023 Jun 07.
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*
Leukemia*/metabolism
Humans ; DNA, Ribosomal/genetics ; DNA, Ribosomal/metabolism ; K562 Cells ; Cell Differentiation/genetics ; Erythroid Cells/metabolism

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Skocz do pozycji: 19.

Tytuł:: HAT: Hypergraph analysis toolbox.
Autorzy:: Pickard J; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America.; iReprogram, Inc., Ann Arbor, Michigan, United States of America.
Chen C; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, United States of America.
Salman R; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, Michigan, United States of America.
Stansbury C; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America.
Kim S; Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, Michigan, United States of America.
Surana A; Raytheon Technologies Research Center, East Hartford, Connecticut, United States of America.
Bloch A; Department of Mathematics, University of Michigan, Ann Arbor, Michigan, United States of America.
Rajapakse I; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America.; iReprogram, Inc., Ann Arbor, Michigan, United States of America.; Department of Mathematics, University of Michigan, Ann Arbor, Michigan, United States of America.; Pokaż więcej
Źródło:: PLoS computational biology [PLoS Comput Biol] 2023 Jun 05; Vol. 19 (6), pp. e1011190. Date of Electronic Publication: 2023 Jun 05 (Print Publication: 2023).
Typ publikacji:: Journal Article
MeSH Terms:: Chromosomes*
Software*

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Tytuł:: High-Quality Chromosome-Level Genome Assembly of the Corsac Fox ( Vulpes corsac ) Reveals Adaptation to Semiarid and Harsh Environments.
Autorzy:: Zhang Z; School of Life Science, Qufu Normal University, Qufu 273165, China.
Xia T; School of Life Science, Qufu Normal University, Qufu 273165, China.
Zhou S; School of Life Science, Qufu Normal University, Qufu 273165, China.
Yang X; School of Life Science, Qufu Normal University, Qufu 273165, China.
Lyu T; School of Life Science, Qufu Normal University, Qufu 273165, China.
Wang L; School of Life Science, Qufu Normal University, Qufu 273165, China.
Fang J; School of Life Science, Qufu Normal University, Qufu 273165, China.
Wang Q; Hulunbuir Academy of Inland Lakes in Northern Cold & Arid Areas, Hulunbuir 021000, China.
Dou H; Hulunbuir Academy of Inland Lakes in Northern Cold & Arid Areas, Hulunbuir 021000, China.
Zhang H; School of Life Science, Qufu Normal University, Qufu 273165, China.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2023 May 31; Vol. 24 (11). Date of Electronic Publication: 2023 May 31.
Typ publikacji:: Journal Article
MeSH Terms:: Foxes*/genetics
Chromosomes*/genetics
Animals ; Phylogeny ; Genome/genetics ; Repetitive Sequences, Nucleic Acid

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