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Wyszukujesz frazę ""Chromatin Immunoprecipitation"" wg kryterium: Temat


Tytuł :
CHIPIN: ChIP-seq inter-sample normalization based on signal invariance across transcriptionally constant genes.
Autorzy :
Polit L; Institut Cochin, Inserm U1016, CNRS UMR 8104, Paris Descartes University UMR-S1016, 75014, Paris, France.
Kerdivel G; Institut Cochin, Inserm U1016, CNRS UMR 8104, Paris Descartes University UMR-S1016, 75014, Paris, France.
Gregoricchio S; INSERM UMR1170, Equipe Labellisée Ligue Nationale Contre Le Cancer, Gustave Roussy, Paris-Saclay University, 94800, Villejuif, France.
Esposito M; INSERM UMR1170, Equipe Labellisée Ligue Nationale Contre Le Cancer, Gustave Roussy, Paris-Saclay University, 94800, Villejuif, France.
Guillouf C; INSERM UMR1170, Equipe Labellisée Ligue Nationale Contre Le Cancer, Gustave Roussy, Paris-Saclay University, 94800, Villejuif, France.
Boeva V; Institut Cochin, Inserm U1016, CNRS UMR 8104, Paris Descartes University UMR-S1016, 75014, Paris, France. .; Department of Computer Science, Institute for Machine Learning, ETH Zurich, 8092, Zurich, Switzerland. .; Swiss Institute for Bioinformatics (SIB), Zürich, Switzerland. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Aug 17; Vol. 22 (1), pp. 407. Date of Electronic Publication: 2021 Aug 17.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin*
Chromatin Immunoprecipitation Sequencing*
Chromatin Immunoprecipitation ; Protein Binding ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Chromatin Immunoprecipitation and Sequencing (ChIP-seq) Optimized for Application in Caenorhabditis elegans.
Autorzy :
Sen I; Department of Medicine, Integrated Cardio Metabolic Centre (ICMC), Karolinska Institute, Huddinge, Sweden.; Department of Biosciences and Nutrition, Karolinska Institute, Huddinge, Sweden.
Kavšek A; Department of Medicine, Integrated Cardio Metabolic Centre (ICMC), Karolinska Institute, Huddinge, Sweden.; Department of Biosciences and Nutrition, Karolinska Institute, Huddinge, Sweden.
Riedel CG; Department of Medicine, Integrated Cardio Metabolic Centre (ICMC), Karolinska Institute, Huddinge, Sweden.; Department of Biosciences and Nutrition, Karolinska Institute, Huddinge, Sweden.
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Źródło :
Current protocols [Curr Protoc] 2021 Jul; Vol. 1 (7), pp. e187.
Typ publikacji :
Journal Article
MeSH Terms :
Caenorhabditis elegans*/genetics
Chromatin Immunoprecipitation Sequencing*
Animals ; Chromatin Immunoprecipitation ; High-Throughput Nucleotide Sequencing ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
UniBind: maps of high-confidence direct TF-DNA interactions across nine species.
Autorzy :
Puig RR; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0349, Oslo, Norway.
Boddie P; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0349, Oslo, Norway.
Khan A; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0349, Oslo, Norway.; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Castro-Mondragon JA; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0349, Oslo, Norway.
Mathelier A; Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, 0349, Oslo, Norway. .; Department of Medical Genetics, Oslo University Hospital, Oslo, 0424, Norway. .
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Źródło :
BMC genomics [BMC Genomics] 2021 Jun 26; Vol. 22 (1), pp. 482. Date of Electronic Publication: 2021 Jun 26.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
DNA*/metabolism
Binding Sites ; Chromatin Immunoprecipitation ; Computational Biology ; Protein Binding
Czasopismo naukowe
Tytuł :
Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models.
Autorzy :
Liehrmann A; Institut des Sciences des Plantes de Paris-Saclay (IPS2), Université Paris-Saclay, Université Evry, CNRS, INRAE, 91405, Orsay, France. .; Laboratoire de Mathématiques et Modélisation d'Evry (LAMME), Université Paris-Saclay, Université Evry, CNRS, 91037, Evry, France. .
Rigaill G; Institut des Sciences des Plantes de Paris-Saclay (IPS2), Université Paris-Saclay, Université Evry, CNRS, INRAE, 91405, Orsay, France.; Laboratoire de Mathématiques et Modélisation d'Evry (LAMME), Université Paris-Saclay, Université Evry, CNRS, 91037, Evry, France.
Hocking TD; School of Informatics, Computing, and Cyber Systems (SICCS), Northern Arizona University, 86011, Flagstaff, AZ, USA.
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Jun 14; Vol. 22 (1), pp. 323. Date of Electronic Publication: 2021 Jun 14.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
High-Throughput Nucleotide Sequencing*
Algorithms ; Chromatin Immunoprecipitation ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
NoPeak: k-mer-based motif discovery in ChIP-Seq data without peak calling.
Autorzy :
Menzel M; MNI, Technische Hochschule Mittelhessen, University of Applied Sciences, Giessen 35390, Germany.
Hurka S; Institute for Insect Biotechnology, Justus Liebig University, Giessen 35392, Germany.
Glasenhardt S; MNI, Technische Hochschule Mittelhessen, University of Applied Sciences, Giessen 35390, Germany.
Gogol-Döring A; MNI, Technische Hochschule Mittelhessen, University of Applied Sciences, Giessen 35390, Germany.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2021 May 05; Vol. 37 (5), pp. 596-602.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
High-Throughput Nucleotide Sequencing*
Binding Sites ; Chromatin Immunoprecipitation ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
WACS: improving ChIP-seq peak calling by optimally weighting controls.
Autorzy :
Awdeh A; School of Electrical Engineering and Computer Science, University of Ottawa, Ottawa, K1N6N5, Canada. .; Regenerative Medicine Program, Ottawa Hospital Research Institute, Ottawa, K1H8L6, Canada. .
Turcotte M; School of Electrical Engineering and Computer Science, University of Ottawa, Ottawa, K1N6N5, Canada.
Perkins TJ; School of Electrical Engineering and Computer Science, University of Ottawa, Ottawa, K1N6N5, Canada. .; Regenerative Medicine Program, Ottawa Hospital Research Institute, Ottawa, K1H8L6, Canada. .; Department of Biochemistry, Microbiology and Immunology, University of Ottawa, Ottawa, K1H8M5, Canada. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Feb 15; Vol. 22 (1), pp. 69. Date of Electronic Publication: 2021 Feb 15.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
High-Throughput Nucleotide Sequencing*
Algorithms ; Chromatin Immunoprecipitation ; Reproducibility of Results ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
intePareto: an R package for integrative analyses of RNA-Seq and ChIP-Seq data.
Autorzy :
Cao Y; Bioinformatics and Computational Biophysics, Faculty of Biology and Center for Medical Biotechnology (ZMB), University of Duisburg-Essen, Universitätsstr.2, Essen, 45141, Germany. .
Kitanovski S; Bioinformatics and Computational Biophysics, Faculty of Biology and Center for Medical Biotechnology (ZMB), University of Duisburg-Essen, Universitätsstr.2, Essen, 45141, Germany.
Hoffmann D; Bioinformatics and Computational Biophysics, Faculty of Biology and Center for Medical Biotechnology (ZMB), University of Duisburg-Essen, Universitätsstr.2, Essen, 45141, Germany.
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Źródło :
BMC genomics [BMC Genomics] 2020 Dec 29; Vol. 21 (Suppl 11), pp. 802. Date of Electronic Publication: 2020 Dec 29.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
High-Throughput Nucleotide Sequencing*
Chromatin Immunoprecipitation ; Computational Biology ; RNA-Seq
Czasopismo naukowe
Tytuł :
A new approach for quantifying epigenetic landscapes.
Autorzy :
Fischle W; Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia. Electronic address: .
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Źródło :
The Journal of biological chemistry [J Biol Chem] 2020 Nov 20; Vol. 295 (47), pp. 15838-15839.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Comment
MeSH Terms :
Chromatin*/genetics
Chromatin Immunoprecipitation Sequencing*
Chromatin Immunoprecipitation ; Epigenesis, Genetic ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Anomaly detection in genomic catalogues using unsupervised multi-view autoencoders.
Autorzy :
Ferré Q; INSERM, TAGC, Aix Marseille University, Marseille, France.; Université de Toulon, CNRS, LIS, Aix Marseille University, Marseille, France.
Chèneby J; INSERM, TAGC, Aix Marseille University, Marseille, France.
Puthier D; INSERM, TAGC, Aix Marseille University, Marseille, France.
Capponi C; Université de Toulon, CNRS, LIS, Aix Marseille University, Marseille, France. .
Ballester B; INSERM, TAGC, Aix Marseille University, Marseille, France. .
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Źródło :
BMC bioinformatics [BMC Bioinformatics] 2021 Sep 25; Vol. 22 (1), pp. 460. Date of Electronic Publication: 2021 Sep 25.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
Genomics*
Regulatory Sequences, Nucleic Acid
Czasopismo naukowe
Tytuł :
Application of topic models to a compendium of ChIP-Seq datasets uncovers recurrent transcriptional regulatory modules.
Autorzy :
Yang G; Department of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, GA 30322, USA.; Department of Cardiovascular Medicine, First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Ma A; Department of Cardiovascular Medicine, First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P. R. China.
Qin ZS; Department of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, GA 30322, USA.
Chen L; Department of Medicine, Indiana University School of Medicine, Indianapolis, IN 46202, USA.; Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Apr 15; Vol. 36 (8), pp. 2352-2358.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
Transcription Factors*/genetics
Binding Sites ; Chromatin Immunoprecipitation ; Databases, Genetic ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
ChIPseqSpikeInFree: a ChIP-seq normalization approach to reveal global changes in histone modifications without spike-in.
Autorzy :
Jin H; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Kasper LH; Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Larson JD; Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Wu G; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Baker SJ; Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Zhang J; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Fan Y; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Feb 15; Vol. 36 (4), pp. 1270-1272.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
Histone Code*
Chromatin ; Chromatin Immunoprecipitation ; Retrospective Studies ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Unified Analysis of Multiple ChIP-Seq Datasets.
Autorzy :
Ma G; Department of Biology, Southern University of Science and Technology, Shenzhen, China.
Babarinde IA; Department of Biology, Southern University of Science and Technology, Shenzhen, China.
Zhuang Q; Department of Biology, Southern University of Science and Technology, Shenzhen, China.; State Key Laboratory of Medicinal Chemical Biology and College of Life Sciences, Nankai University, Tianjin, China.
Hutchins AP; Department of Biology, Southern University of Science and Technology, Shenzhen, China. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2198, pp. 451-465.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation Sequencing/*methods
Computational Biology/*methods
Sequence Analysis, DNA/*methods
Algorithms ; Animals ; Binding Sites ; Chromatin/chemistry ; Chromatin/genetics ; Chromatin Immunoprecipitation/methods ; DNA/chemistry ; DNA/genetics ; Genome ; Genomics ; High-Throughput Nucleotide Sequencing/methods ; Humans
Czasopismo naukowe
Tytuł :
A High-Throughput Chromatin Immunoprecipitation Sequencing Approach to Study the Role of MYC on the Epigenetic Landscape.
Autorzy :
Fagnocchi L; Chromatin Biology & Epigenetics Lab, Department of Cellular, Computational, and Integrative Biology (CIBIO), University of Trento, Trento, Italy.; Fondazione Istituto Nazionale di Genetica Molecolare 'Romeo ed Erica Invernizzi' (INGM), Milan, Italy.; Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI, USA.
Zippo A; Chromatin Biology & Epigenetics Lab, Department of Cellular, Computational, and Integrative Biology (CIBIO), University of Trento, Trento, Italy. .; Fondazione Istituto Nazionale di Genetica Molecolare 'Romeo ed Erica Invernizzi' (INGM), Milan, Italy. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2318, pp. 187-208.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation Sequencing/*methods
Epigenomics/*methods
Proto-Oncogene Proteins c-myc/*genetics
Chromatin/genetics ; Chromatin Immunoprecipitation/methods ; Computational Biology/methods ; DNA/genetics ; Epigenesis, Genetic/genetics ; Genes, myc/genetics ; Genes, myc/physiology ; High-Throughput Nucleotide Sequencing/methods ; Histone Code/genetics ; Histones/metabolism ; Humans ; Protein Processing, Post-Translational/genetics ; Proto-Oncogene Proteins c-myc/metabolism ; Sequence Analysis, DNA/methods ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł :
Chromatin Immunoprecipitation of Meiotically Expressed Proteins from Arabidopsis thaliana Flowers.
Autorzy :
Lambing C; Department of Plant Sciences, University of Cambridge, Cambridge, UK.
Choi K; Department of Plant Sciences, University of Cambridge, Cambridge, UK.; Department of Life Sciences, Pohang University of Science and Technology, Pohang, Gyeongbuk, Republic of Korea.
Blackwell AR; Department of Plant Sciences, University of Cambridge, Cambridge, UK.
Henderson IR; Department of Plant Sciences, University of Cambridge, Cambridge, UK. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2020; Vol. 2061, pp. 219-236.
Typ publikacji :
Journal Article
MeSH Terms :
Chromatin Immunoprecipitation*/methods
Arabidopsis/*genetics
Arabidopsis Proteins/*genetics
Flowers/*genetics
Meiosis/*genetics
Chromatin Immunoprecipitation Sequencing
Czasopismo naukowe
Tytuł :
Analysis of Epigenetic Modifications During Vegetative and Reproductive Development in Cereals Using Chromatin Immunoprecipitation (ChIP).
Autorzy :
Begcy K; Environmental Horticulture Department, University of Florida, Gainesville, FL, USA. .
Dresselhaus T; Cell Biology and Plant Biochemistry, Regensburg Center for Biochemistry, University of Regensburg, Regensburg, Germany.
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2020; Vol. 2072, pp. 141-156.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation*/methods
Epigenesis, Genetic*
Epigenomics*/methods
Edible Grain/*genetics
Plant Development/*genetics
Reproduction/*genetics
Chromatin Immunoprecipitation Sequencing ; DNA Methylation ; Edible Grain/metabolism ; Histone Code ; Histones/metabolism ; Polymerase Chain Reaction ; Protein Processing, Post-Translational
Czasopismo naukowe
Tytuł :
epic2 efficiently finds diffuse domains in ChIP-seq data.
Autorzy :
Stovner EB; Department of Computer Science, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Department of Clinical and Molecular Medicine, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Bioinformatics Core Facility, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Department of Public Health and Nursing, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.
Sætrom P; Department of Computer Science, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Department of Clinical and Molecular Medicine, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Bioinformatics Core Facility, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.; Department of Public Health and Nursing, K.G. Jebsen Center for Genetic Epidemiology, Norwegian University of Science and Technology, Trondheim 7013, Norway.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2019 Nov 01; Vol. 35 (21), pp. 4392-4393.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
High-Throughput Nucleotide Sequencing*
Chromatin Immunoprecipitation ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
ProSampler: an ultrafast and accurate motif finder in large ChIP-seq datasets for combinatory motif discovery.
Autorzy :
Li Y; School of Mathematics, Shandong University, Jinan 250100, China.; Department of Bioinformatics and Genomics, College of Computing and Informatics, The University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
Ni P; Department of Bioinformatics and Genomics, College of Computing and Informatics, The University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
Zhang S; College of Computer and Information Engineering, Tianjin Normal University, Tianjin 300387, China.
Li G; School of Mathematics, Shandong University, Jinan 250100, China.; Department of Bioinformatics and Genomics, College of Computing and Informatics, The University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
Su Z; Department of Bioinformatics and Genomics, College of Computing and Informatics, The University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2019 Nov 01; Vol. 35 (22), pp. 4632-4639.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
Software*
Algorithms ; Binding Sites ; Chromatin Immunoprecipitation
Czasopismo naukowe
Tytuł :
ChIP-GSM: Inferring active transcription factor modules to predict functional regulatory elements.
Autorzy :
Chen X; Bradley Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, Virginia, United States of America.; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, New York, United States of America.
Neuwald AF; Institute for Genome Sciences and Department Biochemistry & Molecular Biology, University of Maryland School of Medicine, Baltimore, Maryland, United States of America.
Hilakivi-Clarke L; Hormel Institute, University of Minnesota, Minnesota, United States of America.
Clarke R; Hormel Institute, University of Minnesota, Minnesota, United States of America.
Xuan J; Bradley Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, Virginia, United States of America.
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Źródło :
PLoS computational biology [PLoS Comput Biol] 2021 Jul 22; Vol. 17 (7), pp. e1009203. Date of Electronic Publication: 2021 Jul 22 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Gene Regulatory Networks*
Chromatin Immunoprecipitation Sequencing/*methods
Regulatory Sequences, Nucleic Acid/*genetics
Transcription Factors/*genetics
Transcription Factors/*metabolism
Bayes Theorem ; Binding Sites/genetics ; Chromatin/genetics ; Chromatin/metabolism ; Chromatin Immunoprecipitation Sequencing/statistics & numerical data ; Computational Biology ; Enhancer Elements, Genetic ; Epigenesis, Genetic ; Gene Expression Regulation ; Humans ; K562 Cells ; MCF-7 Cells ; Models, Statistical ; Promoter Regions, Genetic
Czasopismo naukowe
Tytuł :
High-resolution, genome-wide mapping of positive supercoiling in chromosomes.
Autorzy :
Guo MS; Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Kawamura R; Department of Molecular Biosciences, Northwestern University, Evanston, United States.
Littlehale ML; Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Marko JF; Department of Molecular Biosciences, Northwestern University, Evanston, United States.; Department of Physics and Astronomy, Northwestern University, Evanston, United States.
Laub MT; Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, United States.
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Źródło :
ELife [Elife] 2021 Jul 19; Vol. 10. Date of Electronic Publication: 2021 Jul 19.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation*
Chromosome Structures*
Bacterial Proteins/*genetics
Chromosomes/*metabolism
Bacterial Proteins/metabolism ; Binding Sites ; Cell Cycle Proteins ; Chromosomal Proteins, Non-Histone ; Chromosomes, Bacterial ; DNA/metabolism ; DNA Replication ; DNA, Bacterial ; Escherichia coli/genetics ; Protein Binding ; Saccharomyces cerevisiae/genetics ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Single-cell ATAC-seq reveals GATA2-dependent priming defect in myeloid and a maturation bottleneck in lymphoid lineages.
Autorzy :
Avagyan S; Dana-Farber/Boston Children's Hospital Cancer and Blood Disorders Center, Boston, MA.
Weber MC; Boston Children's Hospital, Boston, MA.
Ma S; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA.; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA; and.
Prasad M; Boston Children's Hospital, Boston, MA.
Mannherz WP; Boston Children's Hospital, Boston, MA.
Yang S; Boston Children's Hospital, Boston, MA.
Buenrostro JD; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA.; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA.
Zon LI; Boston Children's Hospital, Boston, MA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA.; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA.
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Źródło :
Blood advances [Blood Adv] 2021 Jul 13; Vol. 5 (13), pp. 2673-2686.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromatin Immunoprecipitation Sequencing*
GATA2 Deficiency*
Animals ; GATA2 Transcription Factor ; Lymphopoiesis ; Transcription Factors/genetics ; Xenopus Proteins ; Zebrafish
Czasopismo naukowe

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