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Tytuł:
Development of whole-genome multiplex assays and construction of an integrated genetic map using SSR markers in Senegalese sole.
Autorzy:
Guerrero-Cózar I; IFAPA Centro El Toruño, Junta de Andalucía, Camino Tiro Pichón s/n, 11500, El Puerto de Santa María, Cádiz, Spain.
Perez-Garcia C; Aquaculture Research Group (GIA), IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Crta. Taliarte s/n, 35214, Telde, Spain.
Benzekri H; Department of Molecular Biology and Biochemistry, Universidad de Málaga, 29071, Málaga, Spain.
Sánchez JJ; Instituto Nacional de Toxicología Y Ciencias Forenses (INT), La Cuesta, La Laguna, 38320, Sta. Cruz de Tenerife, Spain.
Seoane P; Department of Molecular Biology and Biochemistry, Universidad de Málaga, 29071, Málaga, Spain.
Cruz F; CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 4, 08028, Barcelona, Spain.
Gut M; CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 4, 08028, Barcelona, Spain.
Zamorano MJ; Aquaculture Research Group (GIA), IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Crta. Taliarte s/n, 35214, Telde, Spain.
Claros MG; Department of Molecular Biology and Biochemistry, Universidad de Málaga, 29071, Málaga, Spain.; CIBER de Enfermedades Raras (CIBERER), 29071, Málaga, Spain.; Institute of Biomedical Research in Málaga (IBIMA), IBIMA-RARE, 29010, Málaga, Spain.; Instituto de Hortofruticultura Subtropical Y Mediterránea (IHSM-UMA-CSIC), 29010, Málaga, Spain.
Manchado M; IFAPA Centro El Toruño, Junta de Andalucía, Camino Tiro Pichón s/n, 11500, El Puerto de Santa María, Cádiz, Spain. .; 'Crecimiento Azul', Centro IFAPA El Toruño, Unidad Asociada Al CSIC', El Puerto de Sta María, Spain. .
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Źródło:
Scientific reports [Sci Rep] 2020 Dec 14; Vol. 10 (1), pp. 21905. Date of Electronic Publication: 2020 Dec 14.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Chromosome Mapping*
Genetic Linkage*
Microsatellite Repeats*
Phylogeny*
Flatfishes/*genetics
Animals ; Genome-Wide Association Study ; Synteny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
LegumeSSRdb: A Comprehensive Microsatellite Marker Database of Legumes for Germplasm Characterization and Crop Improvement.
Autorzy:
Duhan N; Department of Plants, Soils and Climate, CAAS, Utah State University, Logan, UT 84321, USA.; Center for Integrated BioSystems (CIB), CAAS, Utah State University, Logan, UT 84321, USA.
Kaundal R; Department of Plants, Soils and Climate, CAAS, Utah State University, Logan, UT 84321, USA.; Center for Integrated BioSystems (CIB), CAAS, Utah State University, Logan, UT 84321, USA.; Department of Computer Science, CoS, Utah State University, Logan, UT 84321, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2021 Oct 21; Vol. 22 (21). Date of Electronic Publication: 2021 Oct 21.
Typ publikacji:
Dataset; Journal Article
MeSH Terms:
Databases, Genetic*
Fabaceae/*genetics
Microsatellite Repeats/*genetics
Agriculture/methods ; Chromosome Mapping/methods ; Chromosomes/genetics ; Expressed Sequence Tags ; Genetic Markers ; Genome, Plant ; Genomics/methods ; Genotype ; Polymorphism, Genetic/genetics ; Seed Bank
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genetic Diversity of Shanlan Upland Rice ( Oryza sativa L.) and Association Analysis of SSR Markers Linked to Agronomic Traits.
Autorzy:
Yang G; Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
Yang Y; Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
Guan Y; Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
Xu Z; Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
Wang J; Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
Yun Y; Cereal Crops Institute, Sanya Institute, Hainan Academy of Agricultural Sciences, Key Laboratory of Crop Genetics and Breeding of Hainan Province, Scientific Observation and Experiment Station of Gene Resources and Germplasm Creation in Hainan, Ministry of Agriculture and Rural Affairs, Haikou 571100, China.
Yan X; Cereal Crops Institute, Sanya Institute, Hainan Academy of Agricultural Sciences, Key Laboratory of Crop Genetics and Breeding of Hainan Province, Scientific Observation and Experiment Station of Gene Resources and Germplasm Creation in Hainan, Ministry of Agriculture and Rural Affairs, Haikou 571100, China.
Tang Q; Cereal Crops Institute, Sanya Institute, Hainan Academy of Agricultural Sciences, Key Laboratory of Crop Genetics and Breeding of Hainan Province, Scientific Observation and Experiment Station of Gene Resources and Germplasm Creation in Hainan, Ministry of Agriculture and Rural Affairs, Haikou 571100, China.
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Źródło:
BioMed research international [Biomed Res Int] 2021 Oct 19; Vol. 2021, pp. 7588652. Date of Electronic Publication: 2021 Oct 19 (Print Publication: 2021).
Typ publikacji:
Journal Article
MeSH Terms:
Genetic Variation*
Microsatellite Repeats/*genetics
Oryza/*genetics
Quantitative Trait Loci/*genetics
Alleles ; Chromosome Mapping ; Cluster Analysis ; Ecotype ; Genetics, Population ; Genotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Impact of Repetitive DNA Elements on Snake Genome Biology and Evolution.
Autorzy:
Ahmad SF; Animal Genomics and Bioresource Research Center (AGB Research Center), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; The International Undergraduate Program in Bioscience and Technology, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Laboratory of Animal Cytogenetics and Comparative Genomics (ACCG), Department of Genetics, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Special Research Unit for Wildlife Genomics (SRUWG), Department of Forest Biology, Faculty of Forestry, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.
Singchat W; Animal Genomics and Bioresource Research Center (AGB Research Center), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Laboratory of Animal Cytogenetics and Comparative Genomics (ACCG), Department of Genetics, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Special Research Unit for Wildlife Genomics (SRUWG), Department of Forest Biology, Faculty of Forestry, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.
Panthum T; Animal Genomics and Bioresource Research Center (AGB Research Center), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Laboratory of Animal Cytogenetics and Comparative Genomics (ACCG), Department of Genetics, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Special Research Unit for Wildlife Genomics (SRUWG), Department of Forest Biology, Faculty of Forestry, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.
Srikulnath K; Animal Genomics and Bioresource Research Center (AGB Research Center), Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; The International Undergraduate Program in Bioscience and Technology, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Laboratory of Animal Cytogenetics and Comparative Genomics (ACCG), Department of Genetics, Faculty of Science, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Special Research Unit for Wildlife Genomics (SRUWG), Department of Forest Biology, Faculty of Forestry, Kasetsart University, 50 Ngamwongwan, Chatuchak, Bangkok 10900, Thailand.; Amphibian Research Center, Hiroshima University, 1-3-1, Kagamiyama, Higashihiroshima 739-8526, Japan.
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Źródło:
Cells [Cells] 2021 Jul 06; Vol. 10 (7). Date of Electronic Publication: 2021 Jul 06.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms:
Biological Evolution*
DNA Transposable Elements*
Microsatellite Repeats*
Snakes/*genetics
Animals ; Chromosome Mapping ; Female ; Gene Expression Regulation ; Genome Size ; Genomics/methods ; Male ; Phylogeny ; Snakes/classification ; Species Specificity ; Transcription, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Development of genic SSR marker resources from RNA-seq data in Camellia japonica and their application in the genus Camellia.
Autorzy:
Li Q; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China. .
Su X; College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Ma H; College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Du K; College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Yang M; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China.; College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Chen B; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China.
Fu S; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China.
Fu T; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China.; College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Xiang C; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China.; College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Zhao Q; College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Xu L; Forestry and Fruit Tree Research Institute, Wuhan Academy of Agricultural Sciences, Wuhan, 430075, China. .
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Źródło:
Scientific reports [Sci Rep] 2021 May 10; Vol. 11 (1), pp. 9919. Date of Electronic Publication: 2021 May 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genetic Markers*
Microsatellite Repeats*
Camellia/*classification
Plant Breeding/*methods
Camellia/genetics ; Chromosome Mapping/methods ; Cluster Analysis ; Geography ; RNA-Seq/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Impact of different numbers of microsatellite markers on population genetic results using SLAF-seq data for Rhododendron species.
Autorzy:
Wang H; Key Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, Changchun, 130024, China.
Yang B; Key Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, Changchun, 130024, China.
Wang H; Key Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, Changchun, 130024, China.
Xiao H; Key Laboratory of Molecular Epigenetics of Ministry of Education, Northeast Normal University, Changchun, 130024, China. .
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Źródło:
Scientific reports [Sci Rep] 2021 Apr 21; Vol. 11 (1), pp. 8597. Date of Electronic Publication: 2021 Apr 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genetic Markers/*genetics
Genome, Plant/*genetics
Microsatellite Repeats/*genetics
Rhododendron/*genetics
Chromosome Mapping/methods ; DNA Primers/genetics ; Expressed Sequence Tags/metabolism ; Genetics, Population/methods ; Genotype ; Polymorphism, Genetic/genetics ; Sequence Analysis, DNA/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Development of SNP, KASP, and SSR Markers by BSR-Seq Technology for Saturation of Genetic Linkage Map and Efficient Detection of Wheat Powdery Mildew Resistance Gene Pm61 .
Autorzy:
Hu J; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Li J; College of Chemistry and Environment Engineering, Pingdingshan University, Pingdingshan 467000, China. .
Wu P; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. ml3051378331_.
Li Y; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Qiu D; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. smart_.
Qu Y; College of Life Science and Technology, Harbin Normal University, Harbin 150080, China. .
Xie J; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China. .
Zhang H; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Yang L; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Fu T; College of Chemistry and Environment Engineering, Pingdingshan University, Pingdingshan 467000, China. .
Yu Y; College of Chemistry and Environment Engineering, Pingdingshan University, Pingdingshan 467000, China. .
Li M; College of Chemistry and Environment Engineering, Pingdingshan University, Pingdingshan 467000, China. .
Liu H; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Zhu T; Zhumadian Academy of Agricultural Sciences, Zhumadian 463000, China. .
Zhou Y; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
Liu Z; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China. .
Li H; The National Engineering Laboratory of Crop Molecular Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China. .
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2019 Feb 11; Vol. 20 (3). Date of Electronic Publication: 2019 Feb 11.
Typ publikacji:
Journal Article
MeSH Terms:
Chromosome Mapping*
Genetic Linkage*
High-Throughput Nucleotide Sequencing*
Microsatellite Repeats*
Polymorphism, Single Nucleotide*
Plant Diseases/*genetics
Disease Resistance/genetics ; Gene Expression Profiling ; Genes, Plant ; Genetic Markers ; Host-Pathogen Interactions/genetics ; Plant Diseases/microbiology ; Sequence Analysis, DNA ; Triticum/genetics ; Triticum/microbiology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
SSR-Linkage map of interspecific populations derived from Gossypium trilobum and Gossypium thurberi and determination of genes harbored within the segregating distortion regions.
Autorzy:
Li P; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.; School of Life Science, Henan University/State Key Laboratory of Cotton Biology/Henan Key Laboratory of Plant Stress Biology, Kaifeng, Henan, China.
Kirungu JN; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Lu H; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Magwanga RO; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.; School of Biological and Physical Sciences (SBPS), Jaramogi Oginga Odinga University of Science and Technology (JOOUST), Bondo- Kenya.
Lu P; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Cai X; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Zhou Z; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Wang X; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Hou Y; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Wang Y; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Xu Y; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Peng R; Biological and Food Engineering, Anyang Institute of technology, Anyang, Henan, China.
Cai Y; School of Life Science, Henan University/State Key Laboratory of Cotton Biology/Henan Key Laboratory of Plant Stress Biology, Kaifeng, Henan, China.
Zhou Y; School of Life Science, Henan University/State Key Laboratory of Cotton Biology/Henan Key Laboratory of Plant Stress Biology, Kaifeng, Henan, China.
Wang K; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
Liu F; State Key Laboratory of Cotton Biology /Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, Henan, China.
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Źródło:
PloS one [PLoS One] 2018 Nov 12; Vol. 13 (11), pp. e0207271. Date of Electronic Publication: 2018 Nov 12 (Print Publication: 2018).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Chromosome Mapping*
Microsatellite Repeats*
Gossypium/*genetics
Chromosomes, Plant ; Gene Expression Regulation, Plant ; Genes, Plant ; Gossypium/metabolism ; Plant Breeding ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Polymorphism, Genetic ; Real-Time Polymerase Chain Reaction ; Species Specificity
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genomic survey sequencing, development and characterization of single- and multi-locus genomic SSR markers of Elymus sibiricus L.
Autorzy:
Xiong Y; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.
Lei X; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.; Sichuan Academy of Grassland Science, Chengdu, 611731, China.
Bai S; Sichuan Academy of Grassland Science, Chengdu, 611731, China.
Xiong Y; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.
Liu W; Key Laboratory of Superior Forage Germplasm in the Qinghai-Tibetan Plateau, Qinghai Academy of Animal Science and Veterinary Medicine, Xining, 81108, China.
Wu W; Sichuan Pratacultural Technology Research and Extension Center, Chengdu, 610041, China.
Yu Q; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.
Dong Z; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.
Yang J; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China.
Ma X; Department of Grassland Science, Animal Science and Technology College, Sichuan Agricultural University, Chengdu, 611130, China. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2021 Jan 06; Vol. 21 (1), pp. 3. Date of Electronic Publication: 2021 Jan 06.
Typ publikacji:
Journal Article
MeSH Terms:
Expressed Sequence Tags*
Genetic Loci*
Genome, Plant*
Genomics*
DNA, Plant/*genetics
Elymus/*genetics
Microsatellite Repeats/*genetics
Chromosome Mapping ; Gene Library ; Genetic Markers ; Genetic Variation ; High-Throughput Nucleotide Sequencing
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data.
Autorzy:
Chiara M; Department of Biosciences, University of Milan, via Celoria 26, 20133 Milan, Italy.; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Via Amendola e, 70126 Bari, Italy.
Zambelli F; Department of Biosciences, University of Milan, via Celoria 26, 20133 Milan, Italy.; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Via Amendola e, 70126 Bari, Italy.
Picardi E; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Via Amendola e, 70126 Bari, Italy.; Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari 'A. Moro', Via Orabona 4, 70126 Bari, Italy.
Horner DS; Department of Biosciences, University of Milan, via Celoria 26, 20133 Milan, Italy.; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Via Amendola e, 70126 Bari, Italy.
Pesole G; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, National Research Council, Via Amendola e, 70126 Bari, Italy.; Department of Biosciences, Biotechnology and Biopharmaceutics, University of Bari 'A. Moro', Via Orabona 4, 70126 Bari, Italy.
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Źródło:
Briefings in bioinformatics [Brief Bioinform] 2020 Dec 01; Vol. 21 (6), pp. 1971-1986.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Computational Biology*
High-Throughput Nucleotide Sequencing*/methods
Microsatellite Repeats*
Molecular Sequence Data*
Sequence Analysis, DNA*/methods
Alleles ; Chromosome Mapping ; Genome, Human ; Genomics/methods ; Humans ; Reproducibility of Results
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Development of EST-SSR markers and association mapping with floral traits in Syringa oblata.
Autorzy:
Yang Y; Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing University of Agriculture, Beijing, 102206, China.; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China.
He R; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China.
Zheng J; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China.; Beijing Laboratory of Urban and Rural Ecological Environment, Beijing, 102206, China.
Hu Z; Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing University of Agriculture, Beijing, 102206, China.; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China.; Beijing Laboratory of Urban and Rural Ecological Environment, Beijing, 102206, China.
Wu J; Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing University of Agriculture, Beijing, 102206, China. .; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China. .; Beijing Laboratory of Urban and Rural Ecological Environment, Beijing, 102206, China. .
Leng P; Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing University of Agriculture, Beijing, 102206, China.; College of Landscape Architecture, Beijing University of Agriculture, Beijing, 102206, China.; Beijing Laboratory of Urban and Rural Ecological Environment, Beijing, 102206, China.
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Źródło:
BMC plant biology [BMC Plant Biol] 2020 Sep 21; Vol. 20 (1), pp. 436. Date of Electronic Publication: 2020 Sep 21.
Typ publikacji:
Journal Article
MeSH Terms:
Expressed Sequence Tags*
Quantitative Trait, Heritable*
Flowers/*genetics
Microsatellite Repeats/*genetics
Syringa/*genetics
Chromosome Mapping ; Genetic Association Studies ; Genetic Markers/genetics ; Genetic Variation/genetics ; Syringa/anatomy & histology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome-wide identification of meiotic recombination hot spots detected by SLAF in peanut (Arachis hypogaea L.).
Autorzy:
Wang X; College of Agriculture and Forestry Science, Linyi University, Middle of Shuangling Road, Lanshan District, Linyi, 276000, China.
Xu P; College of Agriculture and Forestry Science, Linyi University, Middle of Shuangling Road, Lanshan District, Linyi, 276000, China. .
Ren Y; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Yin L; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Li S; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Wang Y; College of Agriculture and Forestry Science, Linyi University, Middle of Shuangling Road, Lanshan District, Linyi, 276000, China.
Shi Y; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Li H; College of Agriculture and Forestry Science, Linyi University, Middle of Shuangling Road, Lanshan District, Linyi, 276000, China.
Cao X; College of Agriculture and Forestry Science, Linyi University, Middle of Shuangling Road, Lanshan District, Linyi, 276000, China.
Chi X; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Yu T; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China.
Pandey MK; International Crops Research Institute for Semi-Arid Tropics (ICRISAT), Greater Hyderabad, Patancheru, 502 324, India.
Varshney RK; International Crops Research Institute for Semi-Arid Tropics (ICRISAT), Greater Hyderabad, Patancheru, 502 324, India.
Yuan M; Key Laboratory of Peanut Biology and Genetic Improvement, Ministry of Agriculture, Shandong Peanut Research Institute, No.126, Wannianquan Road, Licang District, Qingdao, 266100, China. .
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Źródło:
Scientific reports [Sci Rep] 2020 Aug 14; Vol. 10 (1), pp. 13792. Date of Electronic Publication: 2020 Aug 14.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Homologous Recombination*
Arachis/*genetics
DNA, Plant/*genetics
Genome, Plant/*genetics
Meiosis/*genetics
Microsatellite Repeats/*genetics
Algorithms ; Arachis/classification ; Chromosome Mapping/methods ; Chromosomes, Plant/genetics ; Domestication ; Genotype ; Models, Genetic ; Polymorphism, Single Nucleotide ; Quantitative Trait Loci/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Construction of High Density Sweet Cherry (Prunus avium L.) Linkage Maps Using Microsatellite Markers and SNPs Detected by Genotyping-by-Sequencing (GBS).
Autorzy:
Guajardo V; Centro de Estudios Avanzados en Fruticultura (CEAF), Los Choapinos, Rengo, Chile.
Solís S; Centro de Estudios Avanzados en Fruticultura (CEAF), Los Choapinos, Rengo, Chile.
Sagredo B; Instituto de Investigaciones Agropecuarias, INIA Rayentué, Rengo, Chile.
Gainza F; Centro de Estudios Avanzados en Fruticultura (CEAF), Los Choapinos, Rengo, Chile.
Muñoz C; Facultad de Ciencias Agronómicas, Universidad de Chile, Santiago, Chile.
Gasic K; Department of Agricultural and Environmental Sciences, Clemson University, Clemson, South Carolina, United States of America.
Hinrichsen P; Instituto de Investigaciones Agropecuarias, INIA La Platina, Santiago, Chile.
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Źródło:
PloS one [PLoS One] 2015 May 26; Vol. 10 (5), pp. e0127750. Date of Electronic Publication: 2015 May 26 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genetic Linkage*
Chromosome Mapping/*methods
Genotyping Techniques/*methods
Microsatellite Repeats/*genetics
Polymorphism, Single Nucleotide/*genetics
Prunus avium/*genetics
Sequence Analysis, DNA/*methods
Chromosome Segregation/genetics ; Genes, Plant ; Genomics ; Physical Chromosome Mapping
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Microsatellites mapping for non-model species with chromosomal rearrangement: a case study in the frog Quasipaa boulengeri (Anura: Dicroglossidae).
Autorzy:
Yuan X; a Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China.; b University of Chinese Academy of Sciences, Beijing, China.
Yuan S; a Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China.; b University of Chinese Academy of Sciences, Beijing, China.
Liu Y; a Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China.; b University of Chinese Academy of Sciences, Beijing, China.
Xia Y; a Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China.
Zeng X; a Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, China.
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Źródło:
Genome [Genome] 2017 Aug; Vol. 60 (8), pp. 707-711. Date of Electronic Publication: 2017 Jul 20.
Typ publikacji:
Journal Article
MeSH Terms:
Chromosome Mapping*
Gene Rearrangement*
Anura/*genetics
Microsatellite Repeats/*genetics
Animals ; Genetic Markers
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
A Computational Method to Quantify the Effects of Slipped Strand Mispairing on Bacterial Tetranucleotide Repeats.
Autorzy:
Harhay GP; USDA ARS US Meat Animal Research Center, Clay Center, NE, United States. .
Harhay DM; USDA ARS US Meat Animal Research Center, Clay Center, NE, United States.
Bono JL; USDA ARS US Meat Animal Research Center, Clay Center, NE, United States.
Capik SF; Texas A&M AgriLife Research, Amarillo, TX and the College of Veterinary Medicine & Biomedical Sciences, Texas A&M University System, College Station, TX, United States.
DeDonder KD; Veterinary and Biomedical Research Center, Inc, Manhattan, KS, United States.
Apley MD; Kansas State University, College of Veterinary Medicine, Manhattan, KS, United States.
Lubbers BV; Kansas State University, College of Veterinary Medicine, Manhattan, KS, United States.
White BJ; Kansas State University, College of Veterinary Medicine, Manhattan, KS, United States.
Larson RL; Kansas State University, College of Veterinary Medicine, Manhattan, KS, United States.
Smith TPL; USDA ARS US Meat Animal Research Center, Clay Center, NE, United States.
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Źródło:
Scientific reports [Sci Rep] 2019 Dec 02; Vol. 9 (1), pp. 18087. Date of Electronic Publication: 2019 Dec 02.
Typ publikacji:
Journal Article
MeSH Terms:
Genome, Bacterial*
Microsatellite Repeats*
Bacteria/*genetics
Chromosome Mapping/methods ; DNA, Bacterial/genetics ; Genomics/methods ; High-Throughput Nucleotide Sequencing/methods ; Pasteurellaceae/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Integrative genetic map of repetitive DNA in the sole Solea senegalensis genome shows a Rex transposon located in a proto-sex chromosome.
Autorzy:
García E; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
Cross I; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
Portela-Bens S; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
Rodríguez ME; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
García-Angulo A; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
Molina B; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain.
Cuadrado A; Department of Biomedicine and Biotechnology, University of Alcala, 28871, Alcalá de Henares (Madrid), Spain.
Liehr T; Institut für Humangenetik, Universitätsklinikum Jena, 07747, Jena, Germany.
Rebordinos L; Área de Genética, Facultad de Ciencias del Mar y Ambientales, INMAR, Universidad de Cádiz, 11510, Cádiz, Spain. .
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Źródło:
Scientific reports [Sci Rep] 2019 Nov 20; Vol. 9 (1), pp. 17146. Date of Electronic Publication: 2019 Nov 20.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
DNA Transposable Elements/*genetics
Flatfishes/*genetics
Genome/*genetics
Microsatellite Repeats/*genetics
Sex Chromosomes/*genetics
Animals ; Chromosome Mapping/methods ; In Situ Hybridization, Fluorescence/methods ; Phylogeny ; Retroelements/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome-wide single nucleotide polymorphism-based autozygosity mapping facilitates identification of mutations in consanguineous families with epidermolysis bullosa.
Autorzy:
Vahidnezhad H; Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.; Biotechnology Research Center, Department of Molecular Medicine, Pasteur Institute of Iran, Tehran, Iran.
Youssefian L; Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.; Department of Medical Genetics, Tehran University of Medical Sciences, Tehran, Iran.
Saeidian AH; Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.
Zeinali S; Biotechnology Research Center, Department of Molecular Medicine, Pasteur Institute of Iran, Tehran, Iran.; Kawsar Human Genetics Research Center, Tehran, Iran.
Touati A; Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.; Drexel University College of Medicine, Philadelphia, PA, USA.
Abiri M; Kawsar Human Genetics Research Center, Tehran, Iran.; Department of Medical Genetics and Molecular Biology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Sotoudeh S; Department of Dermatology, Children's Medical Center, Center of Excellence, Tehran University of Medical Sciences, Tehran, Iran.
Norouz-Zadeh S; Kawsar Human Genetics Research Center, Tehran, Iran.; Department of Biology, Islamic Azad University, Arsanjan Branch, Arsanjan, Iran.
Amirinezhad N; Kawsar Human Genetics Research Center, Tehran, Iran.; Department of Biology, Islamic Azad University, Arsanjan Branch, Arsanjan, Iran.
Mozafari N; Skin Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Daneshpazhooh M; Department of Dermatology, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.
Mahmoudi H; Department of Dermatology, Razi Hospital, Tehran University of Medical Sciences, Tehran, Iran.
Hamid M; Biotechnology Research Center, Department of Molecular Medicine, Pasteur Institute of Iran, Tehran, Iran.
Bradfield JP; Center for Applied Genomics, Abramson Pediatric Research Center, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Kim CE; Center for Applied Genomics, Abramson Pediatric Research Center, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Hakonarson H; Center for Applied Genomics, Abramson Pediatric Research Center, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.; Department of Pediatrics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Uitto J; Department of Dermatology and Cutaneous Biology, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.
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Źródło:
Experimental dermatology [Exp Dermatol] 2019 Oct; Vol. 28 (10), pp. 1118-1121. Date of Electronic Publication: 2018 Feb 19.
Typ publikacji:
Letter; Research Support, Non-U.S. Gov't
MeSH Terms:
Consanguinity*
Genome-Wide Association Study*
Microsatellite Repeats*
Polymorphism, Single Nucleotide*
Epidermolysis Bullosa/*genetics
Chromosome Mapping ; Epidermolysis Bullosa/diagnosis ; Female ; Genes, Recessive ; High-Throughput Nucleotide Sequencing ; Homozygote ; Humans ; Male ; Sequence Analysis, DNA
Raport
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Construction of a high-density microsatellite genetic linkage map and mapping of sexual and growth-related traits in half-smooth tongue sole (Cynoglossus semilaevis).
Autorzy:
Song W; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.
Li Y
Zhao Y
Liu Y
Niu Y
Pang R
Miao G
Liao X
Shao C
Gao F
Chen S
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Źródło:
PloS one [PLoS One] 2012; Vol. 7 (12), pp. e52097. Date of Electronic Publication: 2012 Dec 20.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Chromosome Mapping*
Genetic Linkage*
Microsatellite Repeats*
Quantitative Trait, Heritable*
Fishes/*genetics
Animals ; Female ; Genetic Markers ; Lod Score ; Male ; Molecular Sequence Data ; Physical Chromosome Mapping ; Quantitative Trait Loci ; Recombination, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Identification of the sex-determining region in flathead grey mullet (Mugil cephalus).
Autorzy:
Dor L; Institute of Animal Science, Agricultural Research Organization, Bet Dagan, 50250, Israel.; Robert H. Smith Faculty of Agriculture, Food and Environment, Hebrew University of Jerusalem, Rehovot, 76100, Israel.
Shirak A; Institute of Animal Science, Agricultural Research Organization, Bet Dagan, 50250, Israel.
Rosenfeld H; National Center for Mariculture, Israel Oceanographic and Limnological Research, Eilat, 88112, Israel.
Ashkenazi IM; National Center for Mariculture, Israel Oceanographic and Limnological Research, Eilat, 88112, Israel.
Band MR; The Carver Biotechnology Center, University of Illinois, Urbana, IL, 61801, USA.
Korol A; Faculty of Science, Institute of Evolution, University Haifa, Haifa, 31905, Israel.
Ronin Y; Faculty of Science, Institute of Evolution, University Haifa, Haifa, 31905, Israel.
Seroussi E; Institute of Animal Science, Agricultural Research Organization, Bet Dagan, 50250, Israel.
Weller JI; Institute of Animal Science, Agricultural Research Organization, Bet Dagan, 50250, Israel.
Ron M; Institute of Animal Science, Agricultural Research Organization, Bet Dagan, 50250, Israel. .
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Źródło:
Animal genetics [Anim Genet] 2016 Dec; Vol. 47 (6), pp. 698-707. Date of Electronic Publication: 2016 Sep 09.
Typ publikacji:
Journal Article
MeSH Terms:
Chromosome Mapping*
Genetic Linkage*
Microsatellite Repeats*
Sex Determination Processes/*genetics
Smegmamorpha/*genetics
Alleles ; Animals ; Cichlids/genetics ; Female ; Genotype ; High-Throughput Nucleotide Sequencing ; Male ; Sequence Analysis, DNA ; Synteny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome wide characterization of simple sequence repeats in watermelon genome and their application in comparative mapping and genetic diversity analysis.
Autorzy:
Zhu H; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China.
Song P; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China.
Koo DH; Horticulture Department, University of Wisconsin, Madison, WI, 53706, USA.
Guo L; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China.
Li Y; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China.
Sun S; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China.
Weng Y; Horticulture Department, University of Wisconsin, Madison, WI, 53706, USA. .; US Department of Agriculture/Agricultural Research Service, Vegetable Crops Research Unit, 1575 Linden Drive, Madison, WI, 53706, USA. .
Yang L; College of Horticulture, Henan Agricultural University, 63 Nongye Road, Zhengzhou, 450002, China. .
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Źródło:
BMC genomics [BMC Genomics] 2016 Aug 05; Vol. 17, pp. 557. Date of Electronic Publication: 2016 Aug 05.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Chromosome Mapping*
Genetic Variation*
Genome, Plant*
Genome-Wide Association Study*
Microsatellite Repeats*
Citrullus/*genetics
Cucurbitaceae/genetics ; Gene Frequency ; Genomics/methods ; Phylogeny ; Synteny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Wyświetlanie 1-20 z 3641

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