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Tytuł:
Spatially resolved single-cell translatomics at molecular resolution.
Autorzy:
Zeng H; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Huang J; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Ren J; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Wang CK; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Tang Z; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Zhou H; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Zhou Y; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Shi H; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Aditham A; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Sui X; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Chen H; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Lo JA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Wang X; Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2023 Jun 30; Vol. 380 (6652), pp. eadd3067. Date of Electronic Publication: 2023 Jun 30.
Typ publikacji:
Journal Article
MeSH Terms:
Brain*/metabolism
Neuroglia*/metabolism
RNA, Messenger*/genetics
RNA, Messenger*/metabolism
Chromosome Mapping*/methods
Protein Biosynthesis*
Neurons*/metabolism
Single-Cell Gene Expression Analysis*/methods
Animals ; Humans ; Mice ; HeLa Cells ; Gene Expression Regulation
Czasopismo naukowe
Tytuł:
PySmooth: a Python tool for the removal and correction of genotyping errors.
Autorzy:
Soibam B; Department of computer science and engineering technology, University of Houston- Downtown, Houston, TX, One Main St, 77002, USA. .
Roman G; Department of Biomolecular Sciences, School of Pharmacy, University of Mississippi, 415W Faser Hall, University, Oxford, Mississippi, MS, 38677-1848, USA.
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Źródło:
BMC research notes [BMC Res Notes] 2024 Apr 11; Vol. 17 (1), pp. 103. Date of Electronic Publication: 2024 Apr 11.
Typ publikacji:
Journal Article
MeSH Terms:
Software*
Polymorphism, Single Nucleotide*
Humans ; Genotype ; Chromosome Mapping
Czasopismo naukowe
Tytuł:
Genetic insights into superior grain number traits: a QTL analysis of wheat-Agropyron cristatum derivative pubing3228.
Autorzy:
Wang J; College of Chemistry and Environment Engineering, Pingdingshan University, North to Weilailu road, New district, Pingdingshan, Henan, 467000, China. .; Henan Key Laboratory of Germplasm Innovation and Utilization of Eco-economic Woody Plant, Pingdingshan, Henan, China. .
Wang E; Pingdingshan Academy of Agricultural Science, Pingdingshan, Henan, 467001, China.
Cheng S; College of Chemistry and Environment Engineering, Pingdingshan University, North to Weilailu road, New district, Pingdingshan, Henan, 467000, China.; Henan Key Laboratory of Germplasm Innovation and Utilization of Eco-economic Woody Plant, Pingdingshan, Henan, China.
Ma A; Pingdingshan Academy of Agricultural Science, Pingdingshan, Henan, 467001, China.
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Źródło:
BMC plant biology [BMC Plant Biol] 2024 Apr 11; Vol. 24 (1), pp. 271. Date of Electronic Publication: 2024 Apr 11.
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*/genetics
Agropyron*/genetics
Chromosome Mapping ; Plant Breeding ; Genetic Linkage ; Triticum/genetics ; Phenotype ; Edible Grain/genetics
Czasopismo naukowe
Tytuł:
High-throughput diagnostic markers for foliar fungal disease resistance and high oleic acid content in groundnut.
Autorzy:
Pandey MK; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India. .
Gangurde SS; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Shasidhar Y; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Sharma V; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Kale SM; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Khan AW; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Shah P; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Joshi P; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Bhat RS; University of Agricultural Sciences, Dharwad, India.
Janila P; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Bera SK; ICAR-Directorate of Groundnut Research, Junagadh, India.
Varshney RK; International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India. .; Centre for Crop and Food Innovation, WA State Agricultural Biotechnology Centre, Murdoch University, Murdoch, Australia. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2024 Apr 10; Vol. 24 (1), pp. 262. Date of Electronic Publication: 2024 Apr 10.
Typ publikacji:
Journal Article
MeSH Terms:
Basidiomycota*/genetics
Mycoses*
Disease Resistance/genetics ; Oleic Acid ; Plant Breeding ; Chromosome Mapping ; Plant Diseases/genetics ; Plant Diseases/microbiology
Czasopismo naukowe
Tytuł:
Genetic linkage mapping and quantitative trait locus (QTL) analysis of sweet basil (Ocimum basilicum L.) to identify genomic regions associated with cold tolerance and major volatiles.
Autorzy:
Brindisi LJ; New Use Agriculture and Natural Plant Products Program, Department of Plant Biology, Rutgers University, New Jersey, United States of America.
Mattera R 3rd; New Use Agriculture and Natural Plant Products Program, Department of Plant Biology, Rutgers University, New Jersey, United States of America.
Mudiyala S; New Use Agriculture and Natural Plant Products Program, Department of Plant Biology, Rutgers University, New Jersey, United States of America.
Honig J; New Use Agriculture and Natural Plant Products Program, Department of Plant Biology, Rutgers University, New Jersey, United States of America.
Simon JE; New Use Agriculture and Natural Plant Products Program, Department of Plant Biology, Rutgers University, New Jersey, United States of America.
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Źródło:
PloS one [PLoS One] 2024 Apr 09; Vol. 19 (4), pp. e0299825. Date of Electronic Publication: 2024 Apr 09 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*
Ocimum basilicum*/genetics
Humans ; Plant Breeding ; Chromosome Mapping/methods ; Phenotype ; Genomics ; Polymorphism, Single Nucleotide ; Genetic Linkage
Czasopismo naukowe
Tytuł:
A fast comparative genome browser for diverse bacteria and archaea.
Autorzy:
Price MN; Environmental Genomics and Systems Biology, Lawrence Berkeley National Lab, Berkeley, California, United States of America.
Arkin AP; Environmental Genomics and Systems Biology, Lawrence Berkeley National Lab, Berkeley, California, United States of America.
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Źródło:
PloS one [PLoS One] 2024 Apr 09; Vol. 19 (4), pp. e0301871. Date of Electronic Publication: 2024 Apr 09 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Archaea*/genetics
Bacteria*/genetics
Genomics ; Proteins/genetics ; Chromosome Mapping
Czasopismo naukowe
Tytuł:
Genome-wide association study and development of molecular markers for yield and quality traits in peanut (Arachis hypogaea L.).
Autorzy:
Guo M; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Deng L; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Gu J; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Miao J; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Yin J; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Li Y; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Fang Y; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Huang B; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Sun Z; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Qi F; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Dong W; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Lu Z; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Li S; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Hu J; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China.
Zhang X; Shennong Laboratory, Henan Provincial Key Laboratory for Oil Crops Improvement, Henan Academy of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China. .
Ren L; Peanut Institute, Kaifeng Academy of Agricultural and Forestry Sciences, Kaifeng, 475004, China. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2024 Apr 05; Vol. 24 (1), pp. 244. Date of Electronic Publication: 2024 Apr 05.
Typ publikacji:
Journal Article
MeSH Terms:
Genome-Wide Association Study*
Arachis*/genetics
Quantitative Trait Loci/genetics ; Plant Breeding ; Chromosome Mapping/methods ; Phenotype ; Polymorphism, Single Nucleotide/genetics
Czasopismo naukowe
Tytuł:
Integrated meta-analysis and transcriptomics pinpoint genomic loci and novel candidate genes associated with submergence tolerance in rice.
Autorzy:
Aloryi KD; Hubei Collaborative Innovation Centre for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China.
Okpala NE; Hubei Collaborative Innovation Centre for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China.
Guo H; University of Chinese Academy of Sciences, 100049, Beijing, China.
Karikari B; Département de phytologie, Université Laval, Québec, QC, Canada.; Department of Agricultural Biotechnology, Faculty of Agriculture, Food and Consumer Sciences, University for Development Studies, Tamale, Ghana.
Amo A; Department of Horticultural Sciences, Texas A&M University, College Station, TX, USA.; Texas A&M AgriLife Research and Extension Center, Weslaco, TX, USA.
Bello SF; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, Guangdong, China.
Saini DK; Department of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, Punjab, India.; Department of Plant and Soil Science, Texas Tech University, Lubbock, TX, USA.
Akaba S; School of Agriculture, University of Cape Coast, Cape Coast, Ghana.
Tian X; Hubei Collaborative Innovation Centre for Grain Industry, College of Agriculture, Yangtze University, Jingzhou, China. .
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Źródło:
BMC genomics [BMC Genomics] 2024 Apr 04; Vol. 25 (1), pp. 338. Date of Electronic Publication: 2024 Apr 04.
Typ publikacji:
Meta-Analysis; Journal Article
MeSH Terms:
Oryza*/genetics
Chromosome Mapping ; Genome-Wide Association Study ; Plant Breeding ; Genomics ; Gene Expression Profiling
Czasopismo naukowe
Tytuł:
Application of CRISPR/Cas9 for targeted mutagenesis in teosinte Zea mays ssp. parviglumis.
Autorzy:
Zobrist JD; Department of Agronomy, Iowa State University, Ames, Iowa, USA.; Crop Bioengineering Center, Iowa State University, Ames, Iowa, USA.; Interdepartmental Genetics and Genomics Major, Iowa State University, Ames, Iowa, USA.
Lee K; Department of Agronomy, Iowa State University, Ames, Iowa, USA.; Crop Bioengineering Center, Iowa State University, Ames, Iowa, USA.
Wang K; Department of Agronomy, Iowa State University, Ames, Iowa, USA.; Crop Bioengineering Center, Iowa State University, Ames, Iowa, USA.
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Źródło:
Plant biotechnology journal [Plant Biotechnol J] 2024 Apr; Vol. 22 (4), pp. 796-798. Date of Electronic Publication: 2023 Dec 12.
Typ publikacji:
Journal Article
MeSH Terms:
Zea mays*/genetics
CRISPR-Cas Systems*/genetics
Chromosome Mapping ; Mutagenesis/genetics
Czasopismo naukowe
Tytuł:
Establishment of a zebrafish inbred strain, M-AB, capable of regular breeding and genetic manipulation.
Autorzy:
Sadamitsu K; College of Science and Engineering, Aoyama Gakuin University, Sagamihara, 252-5258, Japan.
Velilla F; Model Fish Genetics Laboratory, National Institute of Genetics, Mishima, 411-8540, Japan.
Shinya M; Department of Biology, Keio University, Yokohama, 223-8521, Japan.
Kashima M; College of Science and Engineering, Aoyama Gakuin University, Sagamihara, 252-5258, Japan.; Faculty of Science, Toho University, Funabashi, 274-8510, Japan.
Imai Y; Model Fish Genetics Laboratory, National Institute of Genetics, Mishima, 411-8540, Japan.
Kawasaki T; Model Fish Genetics Laboratory, National Institute of Genetics, Mishima, 411-8540, Japan.
Watai K; College of Science and Engineering, Aoyama Gakuin University, Sagamihara, 252-5258, Japan.
Hosaka M; College of Science and Engineering, Aoyama Gakuin University, Sagamihara, 252-5258, Japan.
Hirata H; College of Science and Engineering, Aoyama Gakuin University, Sagamihara, 252-5258, Japan. .
Sakai N; Model Fish Genetics Laboratory, National Institute of Genetics, Mishima, 411-8540, Japan. .; Department of Genetics, SOKENDAI, Mishima, 411-8540, Japan. .
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Źródło:
Scientific reports [Sci Rep] 2024 Mar 29; Vol. 14 (1), pp. 7455. Date of Electronic Publication: 2024 Mar 29.
Typ publikacji:
Journal Article
MeSH Terms:
Zebrafish*/genetics
Inbreeding*
Animals ; Genome ; Chromosome Mapping ; Phenotype
Czasopismo naukowe
Tytuł:
Mutations overlying the miR172 target site of TOE-type genes are prime candidate variants for the double-flower trait in mei.
Autorzy:
Gattolin S; Institute of Agricultural Biology and Biotechnology (IBBA), CNR - National Research Council of Italy, 20133, Milan, Italy. .
Calastri E; Department of Agricultural and Environmental Sciences (DISAA), University of Milan, 20133, Milan, Italy.
Tassone MR; CREA Research Centre for Genomics and Bioinformatics, Via Paullese 28, 26836, Montanaso Lombardo , LO, Italy.
Cirilli M; Department of Agricultural and Environmental Sciences (DISAA), University of Milan, 20133, Milan, Italy.
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Źródło:
Scientific reports [Sci Rep] 2024 Mar 27; Vol. 14 (1), pp. 7300. Date of Electronic Publication: 2024 Mar 27.
Typ publikacji:
Journal Article
MeSH Terms:
Prunus*/genetics
Humans ; Phenotype ; Chromosome Mapping ; Flowers/genetics ; Mutation
Czasopismo naukowe
Tytuł:
Genome sequencing and analysis of black flounder (Paralichthys orbignyanus) reveals new insights into Pleuronectiformes genomic size and structure.
Autorzy:
Villarreal F; Facultad de Ciencias Exactas y Naturales, Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina.
Burguener GF; Plataforma de Bioinformática Argentina, Facultad de Ciencias Exactas y Naturales, Instituto de Cálculo, UBA, Pabellón 2, Ciudad Universitaria, Buenos Aires, Argentina.
Sosa EJ; Plataforma de Bioinformática Argentina, Facultad de Ciencias Exactas y Naturales, Instituto de Cálculo, UBA, Pabellón 2, Ciudad Universitaria, Buenos Aires, Argentina.; Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales (IQUIBICEN) CONICET, Ciudad Universitaria, Buenos Aires, Argentina.
Stocchi N; Facultad de Ciencias Exactas y Naturales, Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Universidad Nacional de Mar del Plata, Mar del Plata, Argentina.
Somoza GM; Instituto Tecnológico de Chascomús (CONICET-UNSAM), Chascomús, Buenos Aires, Argentina.; Escuela de Bio y Nanotecnologías (UNSAM), Buenos Aires, Argentina.
Turjanski AG; Plataforma de Bioinformática Argentina, Facultad de Ciencias Exactas y Naturales, Instituto de Cálculo, UBA, Pabellón 2, Ciudad Universitaria, Buenos Aires, Argentina.; Instituto de Química Biológica de la Facultad de Ciencias Exactas y Naturales (IQUIBICEN) CONICET, Ciudad Universitaria, Buenos Aires, Argentina.; Departamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina.
Blanco A; Facultade de Veterinaria, Universidade de Santiago de Compostela, Santiago de Compostela, Lugo, Spain.; Departamento de Zoología, Genética y Antropología Física, Facultad de Veterinaria, Campus Terra, Universidade de Santiago de Compostela, Lugo, Spain.
Viñas J; Laboratori d'Ictiologia Genètica, Departament de Biologia, Universitat de Girona, Maria Aurèlia Campmany, 40, Girona, Spain.
Mechaly AS; Instituto de Investigaciones en Biodiversidad y Biotecnología (INBIOTEC-CONICET), Mar del Plata, Argentina. .; Fundación Para Investigaciones Biológicas Aplicadas (FIBA), Mar del Plata, Argentina. .
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Źródło:
BMC genomics [BMC Genomics] 2024 Mar 20; Vol. 25 (1), pp. 297. Date of Electronic Publication: 2024 Mar 20.
Typ publikacji:
Journal Article
MeSH Terms:
Flounder*/genetics
Flatfishes*/genetics
Animals ; Male ; Female ; Genome Size ; Chromosome Mapping ; Genomics
Czasopismo naukowe
Tytuł:
Decryption of the survival "black box": gene family expansion promotes the encystment in ciliated protists.
Autorzy:
Jin D; Laboratory of Biodiversity and Evolution of Protozoa in Wetland, College of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China.
Li C; Key Laboratory of Evolution & Marine Biodiversity (Ministry of Education), and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.
Chen X; Laboratory of Marine Protozoan Biodiversity and Evolution, Marine College, Shandong University, Weihai, 264209, China.; Suzhou Research Institute, Shandong University, Suzhou, 215123, China.
Wang Y; Laboratory of Biodiversity and Evolution of Protozoa in Wetland, College of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China.
Al-Rasheid KAS; Zoology Department, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia.
Stover NA; Department of Biology, Bradley University, Peoria, 61625, USA.
Shao C; Laboratory of Biodiversity and Evolution of Protozoa in Wetland, College of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China. .
Zhang T; Laboratory of Biodiversity and Evolution of Protozoa in Wetland, College of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China. .
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Źródło:
BMC genomics [BMC Genomics] 2024 Mar 18; Vol. 25 (1), pp. 286. Date of Electronic Publication: 2024 Mar 18.
Typ publikacji:
Journal Article
MeSH Terms:
Ciliophora*/genetics
Cysts*
Humans ; Genomics ; Chromosome Mapping ; Signal Transduction
Czasopismo naukowe
Tytuł:
Genome-Wide Association Studies on the Kernel Row Number in a Multi-Parent Maize Population.
Autorzy:
Wang Y; College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Ran F; College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Yin X; Institute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Jiang F; Institute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Bi Y; Institute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Shaw RK; Institute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Fan X; Institute of Food Crops, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 16; Vol. 25 (6). Date of Electronic Publication: 2024 Mar 16.
Typ publikacji:
Journal Article
MeSH Terms:
Genome-Wide Association Study*
Zea mays*/genetics
Chromosome Mapping ; Genetic Linkage ; China ; Phenotype ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
QTL Mapping and Data Mining to Identify Genes Associated with Soybean Epicotyl Length Using Cultivated Soybean and Wild Soybean.
Autorzy:
Chen L; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Ma S; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.; Crop Development Research Institute, Heilongjiang Academy of Land Reclamation Sciences, Harbin 150038, China.
Li F; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Li L; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Yu W; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Yu L; Crop Development Research Institute, Heilongjiang Academy of Land Reclamation Sciences, Harbin 150038, China.
Tang C; Crop Development Research Institute, Heilongjiang Academy of Land Reclamation Sciences, Harbin 150038, China.
Liu C; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Xin D; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Chen Q; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Wang J; National Key Laboratory of Smart Farm Technology and System, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 14; Vol. 25 (6). Date of Electronic Publication: 2024 Mar 14.
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*
Glycine max*/genetics
Humans ; Chromosome Mapping ; Plant Breeding ; Seeds/metabolism ; Data Mining
Czasopismo naukowe
Tytuł:
Optical Genome Mapping Reveals Genomic Alterations upon Gene Editing in hiPSCs: Implications for Neural Tissue Differentiation and Brain Organoid Research.
Autorzy:
Gallego Villarejo L; Department of Molecular Biochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.; Department of Cytology, Institute of Anatomy, Ruhr-University Bochum, 44801 Bochum, Germany.; International Graduate School of Neuroscience, Ruhr-University Bochum, 44801 Bochum, Germany.
Gerding WM; Department of Human Genetics, Ruhr-University Bochum, 44801 Bochum, Germany.
Bachmann L; Department of Molecular Biochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.
Hardt LHI; Department of Molecular Biochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.
Bormann S; Department of Molecular Biochemistry, Ruhr-University Bochum, 44801 Bochum, Germany.
Nguyen HP; Department of Human Genetics, Ruhr-University Bochum, 44801 Bochum, Germany.
Müller T; Institute of Psychiatric Phenomics and Genomics (IPPG), University Hospital, LMU Munich, 80336 Munich, Germany.
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Źródło:
Cells [Cells] 2024 Mar 14; Vol. 13 (6). Date of Electronic Publication: 2024 Mar 14.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Editing*/methods
Induced Pluripotent Stem Cells*/metabolism
Humans ; CRISPR-Cas Systems ; Genomics ; Brain ; Chromosome Mapping
Czasopismo naukowe
Tytuł:
Dig-up Primers : A Pipeline for Identification of Polymorphic Microsatellites Loci within Assemblies of Related Species.
Autorzy:
Turudić A; Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia.; Faculty of Agriculture, University of Zagreb, Svetošimunska Cesta 25, 10000 Zagreb, Croatia.
Liber Z; Faculty of Agriculture, University of Zagreb, Svetošimunska Cesta 25, 10000 Zagreb, Croatia.; Faculty of Science, University of Zagreb, Marulićev trg 9a, 10000 Zagreb, Croatia.
Grdiša M; Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia.; Faculty of Agriculture, University of Zagreb, Svetošimunska Cesta 25, 10000 Zagreb, Croatia.
Jakše J; Biotechnical Faculty, University of Ljubljana, Jamnikarjeva 101, 1000 Ljubljana, Slovenia.
Varga F; Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia.; Faculty of Agriculture, University of Zagreb, Svetošimunska Cesta 25, 10000 Zagreb, Croatia.
Poljak I; Faculty of Forestry and Wood Technology, University of Zagreb, Svetošimunska Cesta 23, 10000 Zagreb, Croatia.
Šatović Z; Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia.; Faculty of Agriculture, University of Zagreb, Svetošimunska Cesta 25, 10000 Zagreb, Croatia.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 09; Vol. 25 (6). Date of Electronic Publication: 2024 Mar 09.
Typ publikacji:
Journal Article
MeSH Terms:
Polymorphism, Genetic*
Genomics*
Genetic Markers ; Chromosome Mapping ; Microsatellite Repeats/genetics ; DNA Primers/genetics
Czasopismo naukowe
Tytuł:
Deleterious phenotypes in wild Arabidopsis arenosa populations are common and linked to runs of homozygosity.
Autorzy:
Barragan AC; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.; The Sainsbury Laboratory, Norwich NR4 7UH, UK.
Collenberg M; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.; Catalent, 73614 Schorndorf, Germany.
Schwab R; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.
Kersten S; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.; Institute of Plant Breeding, University of Hohenheim, 70599 Stuttgart, Germany.
Kerstens MHL; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.; Department of Plant Developmental Biology, Wageningen University and Research, 6708 PB, Wageningen, Netherlands.
Požárová D; Department of Botany, Faculty of Science, Charles University, 128 01 Prague, Czech Republic.; The MAMA AI, 100 00 Prague, Czech Republic.
Bezrukov I; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.
Bemm F; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.; KWS Saat, 37574 Einbeck, Germany.
Kolár F; Department of Botany, Faculty of Science, Charles University, 128 01 Prague, Czech Republic.
Weigel D; Department of Molecular Biology, Max Planck Institute for Biology, 72076 Tübingen, Germany.
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Źródło:
G3 (Bethesda, Md.) [G3 (Bethesda)] 2024 Mar 06; Vol. 14 (3).
Typ publikacji:
Journal Article
MeSH Terms:
Arabidopsis*/genetics
Phenotype ; Chromosome Mapping ; Seeds
Czasopismo naukowe
Tytuł:
Genome-Wide Association Analysis of Effective Tillers in Rice under Different Nitrogen Gradients.
Autorzy:
Liu Y; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Xin W; College of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Chen L; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Liu Y; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Wang X; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Ma C; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Zhai L; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.
Feng Y; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Gao J; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
Zhang W; College of Agriculture, Shenyang Agricultural University, Shenyang 110866, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 04; Vol. 25 (5). Date of Electronic Publication: 2024 Mar 04.
Typ publikacji:
Journal Article
MeSH Terms:
Genome-Wide Association Study*
Oryza*/genetics
Chromosome Mapping ; Nitrogen ; Quantitative Trait Loci
Czasopismo naukowe
Tytuł:
Construction of Genetic Map and QTL Mapping for Seed Size and Quality Traits in Soybean ( Glycine max L.).
Autorzy:
Gao W; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Ma R; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Li X; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Liu J; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Jiang A; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Tan P; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Xiong G; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Du C; Institute of Specialty Crop, Chongqing Academy of Agricultural Sciences, Chongqing 402160, China.
Zhang J; Institute of Specialty Crop, Chongqing Academy of Agricultural Sciences, Chongqing 402160, China.
Zhang X; Institute of Specialty Crop, Chongqing Academy of Agricultural Sciences, Chongqing 402160, China.
Fang X; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Yi Z; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
Zhang J; College of Agronomy and Biotechnology, Southwest University, Chongqing 400715, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 01; Vol. 25 (5). Date of Electronic Publication: 2024 Mar 01.
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*
Glycine max*
Humans ; Chromosome Mapping/methods ; Plant Breeding ; Phenotype ; Seeds/genetics
Czasopismo naukowe
Tytuł:
Application of bulk segregant RNA-Seq (BSR-Seq) and allele-specific primers to study soybean powdery mildew resistance.
Autorzy:
Huang CC; Master Program for Plant Medicine, National Taiwan University, Taipei, 106319, Taiwan.
Lin CH; Taoyuan District Agricultural Research and Extension Station. Ministry of Agriculture, Taoyuan, 327005, Taiwan.
Lin YC; Department of Plant Pathology and Microbiology, National Taiwan University, Taipei, 106319, Taiwan.; Department of Ecology and Evolutionary Biology, The University of Michigan, Ann Arbor, MI, 48109, USA.
Chang HX; Master Program for Plant Medicine, National Taiwan University, Taipei, 106319, Taiwan. .; Department of Plant Pathology and Microbiology, National Taiwan University, Taipei, 106319, Taiwan. .; Center of Biotechnology, National Taiwan University, Taipei, 106319, Taiwan. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2024 Mar 01; Vol. 24 (1), pp. 155. Date of Electronic Publication: 2024 Mar 01.
Typ publikacji:
Journal Article
MeSH Terms:
Glycine max*/genetics
Disease Resistance*/genetics
RNA-Seq ; Alleles ; Chromosome Mapping/methods ; Phenotype ; Erysiphe ; Plant Diseases/genetics
Czasopismo naukowe
Tytuł:
Joint-GWAS, Linkage Mapping, and Transcriptome Analysis to Reveal the Genetic Basis of Plant Architecture-Related Traits in Maize.
Autorzy:
Lu X; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.; Ministry of Agriculture and Rural Affairs Key Laboratory of Crop Genetic Resources and Germplasm Innovation in Karst Region, Guiyang 550006, China.
Liu P; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Tu L; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Guo X; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Wang A; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Zhu Y; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Jiang Y; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.; Ministry of Agriculture and Rural Affairs Key Laboratory of Crop Genetic Resources and Germplasm Innovation in Karst Region, Guiyang 550006, China.
Zhang C; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Xu Y; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Chen Z; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.
Wu X; Institute of Upland Food Crops, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China.; Ministry of Agriculture and Rural Affairs Key Laboratory of Crop Genetic Resources and Germplasm Innovation in Karst Region, Guiyang 550006, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 26; Vol. 25 (5). Date of Electronic Publication: 2024 Feb 26.
Typ publikacji:
Journal Article
MeSH Terms:
Genome-Wide Association Study*
Zea mays*/genetics
Plant Breeding ; Chromosome Mapping ; Phenotype ; Gene Expression Profiling ; Genetic Linkage
Czasopismo naukowe
Tytuł:
A diallel study to detect genetic background variation for FHB resistance in winter wheat.
Autorzy:
Neupane B; Department of Plant Sciences, North Dakota State University, Fargo, ND, 58108, USA. .; Department of Plant Pathology, Washington State University, Pullman, WA, 99164, USA. .
Bisek B; Department of Plant Sciences, North Dakota State University, Fargo, ND, 58108, USA.
Marais F; Department of Plant Sciences, North Dakota State University, Fargo, ND, 58108, USA.
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Źródło:
Scientific reports [Sci Rep] 2024 Feb 26; Vol. 14 (1), pp. 4614. Date of Electronic Publication: 2024 Feb 26.
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*
Fusarium*/genetics
Chromosome Mapping ; Triticum/genetics ; Plant Breeding ; Plant Diseases/genetics ; Disease Resistance/genetics
Czasopismo naukowe
Tytuł:
An immunogenetic basis for lung cancer risk.
Autorzy:
Krishna C; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Tervi A; Institute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki 00290, Finland.
Saffern M; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Wilson EA; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Yoo SK; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Mars N; Institute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki 00290, Finland.
Roudko V; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Cho BA; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Jones SE; Institute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki 00290, Finland.
Vaninov N; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Selvan ME; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Gümüş ZH; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Lenz TL; Research Unit for Evolutionary Immunogenomics, Department of Biology, Universität Hamburg, 20146 Hamburg, Germany.
Merad M; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Oncological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Division of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Boffetta P; Department of Medical and Surgical Sciences, Alma Mater Studiorum University of Bologna, 40138 Bologna, Italy.; Stony Brook Cancer Center, Stony Brook University, New York, NY 11794, USA.
Martínez-Jiménez F; Vall d'Hebron Institute of Oncology, Barcelona 08035, Spain.; Hartwig Medical Foundation, Amsterdam 1098 XH, the Netherlands.
Ollila HM; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.; Institute for Molecular Medicine, Finland (FIMM), HiLIFE, University of Helsinki, Helsinki 00290, Finland.; Center for Genomic Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA 02114, USA.; Department of Anesthesia, Critical Care and Pain Medicine, Massachusetts General Hospital, Boston, MA 02114, USA.
Samstein RM; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Center for Thoracic Oncology, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Radiation Oncology, Mount Sinai Hospital, New York, NY 10029, USA.
Chowell D; The Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Icahn Genomics Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.; Department of Oncological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
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Corporate Authors:
FinnGen§
Źródło:
Science (New York, N.Y.) [Science] 2024 Feb 23; Vol. 383 (6685), pp. eadi3808. Date of Electronic Publication: 2024 Feb 23.
Typ publikacji:
Journal Article
MeSH Terms:
Histocompatibility Antigens Class II*/genetics
Lung Neoplasms*/genetics
Lung Neoplasms*/immunology
Loss of Heterozygosity*
Immunologic Surveillance*/genetics
Genetic Predisposition to Disease*
Humans ; Macrophages, Alveolar/immunology ; Risk Factors ; Smoking/immunology ; Middle Aged ; Aged ; Aged, 80 and over ; Chromosome Mapping ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
Genome-Wide Association Study and Identification of Candidate Genes Associated with Seed Number per Pod in Soybean.
Autorzy:
Wang Q; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Zhang W; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Xu W; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Zhang H; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Liu X; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Chen X; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.
Chen H; Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China.; Zhongshan Biological Breeding Laboratory (ZSBBL), Nanjing 210014, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 22; Vol. 25 (5). Date of Electronic Publication: 2024 Feb 22.
Typ publikacji:
Journal Article
MeSH Terms:
Glycine max*
Genome-Wide Association Study*
Humans ; Chromosome Mapping ; Quantitative Trait Loci ; Linkage Disequilibrium ; Seeds/genetics
Czasopismo naukowe

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