Autor: "Clarke ND" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Integrative model of genomic factors for determining binding site selection by estrogen receptor-α.
Autorzy:: Joseph R; Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore.
Orlov YL
Huss M
Sun W
Kong SL
Ukil L
Pan YF
Li G
Lim M
Thomsen JS
Ruan Y
Clarke ND
Prabhakar S
Cheung E
Liu ET; Pokaż więcej
Źródło:: Molecular systems biology [Mol Syst Biol] 2010 Dec 21; Vol. 6, pp. 456.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Chromatin/*metabolism
Estrogen Receptor alpha/*metabolism
Transcription Factors/*metabolism
Base Sequence ; Binding Sites ; Cell Line ; Cell Line, Tumor ; DNA-Binding Proteins/genetics ; DNA-Binding Proteins/metabolism ; Estrogen Receptor alpha/chemistry ; Estrogen Receptor alpha/genetics ; Hepatocyte Nuclear Factor 3-alpha ; Humans ; Ligands ; Models, Biological ; Protein Binding ; RNA Polymerase II/metabolism ; Response Elements ; Transcription Initiation Site

Czasopismo naukowe

Skocz do pozycji: 2.

Tytuł:: Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local.
Autorzy:: Goh WS; Computational and Systems Biology, Genome Institute of Singapore, Singapore.
Orlov Y
Li J
Clarke ND; Pokaż więcej
Źródło:: PLoS computational biology [PLoS Comput Biol] 2010 Jan 22; Vol. 6 (1), pp. e1000649. Date of Electronic Publication: 2010 Jan 22.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: Computer Simulation*
Models, Genetic*
Computational Biology/*methods
Nucleosomes/*metabolism
Transcription Factors/*metabolism
Area Under Curve ; Binding Sites ; Chromatin/metabolism ; Chromatin Immunoprecipitation ; Cluster Analysis ; DNA/metabolism ; Databases, Protein ; Polymerase Chain Reaction ; Protein Interaction Domains and Motifs ; ROC Curve ; Saccharomyces

Czasopismo naukowe

Skocz do pozycji: 3.

Tytuł:: Inferring direct regulatory targets of a transcription factor in the DREAM2 challenge.
Autorzy:: Vega VB; Genome Institute of Singapore, Singapore.
Woo XY
Hamidi H
Yeo HC
Yeo ZX
Bourque G
Clarke ND; Pokaż więcej
Źródło:: Annals of the New York Academy of Sciences [Ann N Y Acad Sci] 2009 Mar; Vol. 1158, pp. 215-23.
Typ publikacji:: Journal Article
MeSH Terms:: Gene Expression Regulation*
Gene Regulatory Networks*
Transcription Factors/*metabolism
Algorithms ; Animals ; Chromatin Immunoprecipitation ; Computational Biology/methods ; Databases, Genetic ; Gene Expression Profiling ; Humans ; Models, Biological ; Oligonucleotide Array Sequence Analysis ; Proto-Oncogene Proteins/genetics ; Proto-Oncogene Proteins/metabolism ; ROC Curve ; Repressor Proteins/genetics ; Repressor Proteins/metabolism

Czasopismo naukowe

Informacja