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Tytuł :
Outer membrane compositions enhance the rate of extracellular electron transport via cell-surface MtrC protein in Shewanella oneidensis MR-1.
Autorzy :
Long X; International Center for Materials Nanoarchitectonics, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan; School of Energy and Environment, Southeast University, Nanjing 210096, China.
Okamoto A; International Center for Materials Nanoarchitectonics, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan; Graduate School of Chemical Sciences and Engineering, Hokkaido University, North 13 West 8, Kita-ku, Sapporo, Hokkaido 060-8628, Japan. Electronic address: .
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Źródło :
Bioresource technology [Bioresour Technol] 2021 Jan; Vol. 320 (Pt A), pp. 124290. Date of Electronic Publication: 2020 Oct 21.
Typ publikacji :
Journal Article
MeSH Terms :
Cytochrome c Group*/metabolism
Shewanella*/genetics
Shewanella*/metabolism
Electron Transport ; Electrons ; Oxidation-Reduction
SCR Organism :
Shewanella oneidensis
Czasopismo naukowe
Tytuł :
Outer Membrane c -Type Cytochromes OmcA and MtrC Play Distinct Roles in Enhancing the Attachment of Shewanella oneidensis MR-1 Cells to Goethite.
Autorzy :
Jing X; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China.
Wu Y; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China.
Shi L; Department of Biological Sciences and Technology, School of Environmental Studies, China University of Geosciences, Wuhan, China.; State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, China.
Peacock CL; School of Earth and Environment, University of Leeds, Leeds, United Kingdom.
Ashry NM; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China.; Agriculture Microbiology Department, Faculty of Agriculture, Benha University, Moshtohor, Qalubia, Egypt.
Gao C; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China.
Huang Q; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China.
Cai P; State Key Laboratory of Agricultural Microbiology, College of Resources and Environment, Huazhong Agricultural University, Wuhan, China .
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Źródło :
Applied and environmental microbiology [Appl Environ Microbiol] 2020 Nov 10; Vol. 86 (23). Date of Electronic Publication: 2020 Nov 10 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Bacterial Adhesion/*genetics
Bacterial Proteins/*genetics
Cytochrome c Group/*genetics
Iron Compounds/*metabolism
Minerals/*metabolism
Shewanella/*genetics
Bacterial Proteins/metabolism ; Cytochrome c Group/metabolism ; Shewanella/metabolism
SCR Organism :
Shewanella oneidensis
Czasopismo naukowe
Tytuł :
Structure and redox properties of the diheme electron carrier cytochrome c 4 from Pseudomonas aeruginosa.
Autorzy :
Carpenter JM; Department of Chemistry, Dartmouth College, Hanover, NH 03755, United States of America.
Zhong F; Department of Chemistry, Dartmouth College, Hanover, NH 03755, United States of America.
Ragusa MJ; Department of Chemistry, Dartmouth College, Hanover, NH 03755, United States of America.
Louro RO; Instituto de Tecnologia Química e Biologica, Anto ́nio Xavier, Universidade Nova de Lisboa, Av. da Repu ́blica (EAN), 2780-157 Oeiras, Portugal.
Hogan DA; Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, United States of America.
Pletneva EV; Department of Chemistry, Dartmouth College, Hanover, NH 03755, United States of America. Electronic address: .
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Źródło :
Journal of inorganic biochemistry [J Inorg Biochem] 2020 Feb; Vol. 203, pp. 110889. Date of Electronic Publication: 2019 Oct 22.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Electrons*
Bacterial Proteins/*chemistry
Cytochrome c Group/*chemistry
Bacterial Proteins/metabolism ; Catalytic Domain ; Cytochrome c Group/metabolism ; Heme/chemistry ; Heme/metabolism ; Iron/chemistry ; Iron/metabolism ; Molecular Dynamics Simulation ; Oxidation-Reduction ; Protein Binding ; Pseudomonas aeruginosa/enzymology
Czasopismo naukowe
Tytuł :
Protein surface charge effect on 3D domain swapping in cells for c-type cytochromes.
Autorzy :
Yang H; Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
Yamanaka M; Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
Nagao S; Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
Yasuhara K; Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan.
Shibata N; Department of Life Science, Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan.
Higuchi Y; Department of Life Science, Graduate School of Life Science, University of Hyogo, 3-2-1 Koto, Kamigori-cho, Ako-gun, Hyogo 678-1297, Japan.
Hirota S; Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan. Electronic address: .
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Źródło :
Biochimica et biophysica acta. Proteins and proteomics [Biochim Biophys Acta Proteins Proteom] 2019 Nov; Vol. 1867 (11), pp. 140265. Date of Electronic Publication: 2019 Aug 19.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Protein Multimerization*
Bacterial Proteins/*chemistry
Cytochrome c Group/*chemistry
Pseudomonas aeruginosa/*enzymology
Shewanella/*enzymology
Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Cytochrome c Group/genetics ; Cytochrome c Group/metabolism ; Escherichia coli/enzymology ; Escherichia coli/genetics ; Protein Domains ; Pseudomonas aeruginosa/genetics ; Shewanella/genetics ; Surface Properties
Czasopismo naukowe
Tytuł :
Evaluation of mtr cluster expression in Shewanella RCRI7 during uranium removal.
Autorzy :
Ghasemi R; Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran.
Fatemi F; Materials and Nuclear Fuel Research School, Nuclear Science and Technology Research Institute, Tehran, Iran. .
Mir-Derikvand M; Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran. .
Zarei M; Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran.
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Źródło :
Archives of microbiology [Arch Microbiol] 2020 Dec; Vol. 202 (10), pp. 2711-2726. Date of Electronic Publication: 2020 Jul 29.
Typ publikacji :
Journal Article
MeSH Terms :
Biodegradation, Environmental*
Membrane Transport Proteins/*genetics
Shewanella/*genetics
Shewanella/*metabolism
Uranium/*analysis
Water Pollutants, Chemical/*analysis
Bacterial Outer Membrane Proteins/genetics ; Cytochrome c Group/genetics ; Electron Transport/genetics ; Multigene Family/genetics ; Oxidation-Reduction ; Waste Water/chemistry ; Water Pollution/analysis
Czasopismo naukowe
Tytuł :
Improvement of the electron transfer rate in Shewanella oneidensis MR-1 using a tailored periplasmic protein composition.
Autorzy :
Delgado VP; Department of Applied Biology, Institute for Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany.
Paquete CM; Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras, Portugal.
Sturm G; Department of Applied Biology, Institute for Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany; Institute for Biological Interfaces, Karlsruhe Institute of Technology (KIT), Eggenstein-Leopoldshafen, Germany.
Gescher J; Department of Applied Biology, Institute for Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany; Institute for Biological Interfaces, Karlsruhe Institute of Technology (KIT), Eggenstein-Leopoldshafen, Germany. Electronic address: .
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Źródło :
Bioelectrochemistry (Amsterdam, Netherlands) [Bioelectrochemistry] 2019 Oct; Vol. 129, pp. 18-25. Date of Electronic Publication: 2019 Apr 30.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Proteins/*metabolism
Cytochrome c Group/*metabolism
Periplasmic Proteins/*metabolism
Shewanella/*metabolism
Bacterial Proteins/genetics ; Cytochrome c Group/genetics ; Electron Transport ; Equipment Design ; Fumarates/metabolism ; Gene Deletion ; Gene Dosage ; Genetic Engineering/methods ; Lactates/metabolism ; Periplasmic Proteins/genetics ; Shewanella/genetics ; Transcriptome ; Up-Regulation
Czasopismo naukowe
Tytuł :
Determination of the magnetic properties and orientation of the heme axial ligands of PpcA from Geobacter metallireducens by paramagnetic NMR.
Autorzy :
Fernandes TM; UCIBIO-Requimte, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus Caparica, 2829-516 Caparica, Portugal.
Morgado L; UCIBIO-Requimte, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus Caparica, 2829-516 Caparica, Portugal.
Salgueiro CA; UCIBIO-Requimte, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus Caparica, 2829-516 Caparica, Portugal. Electronic address: .
Turner DL; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Avenida da República (EAN), 2780-157 Oeiras, Portugal. Electronic address: .
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Źródło :
Journal of inorganic biochemistry [J Inorg Biochem] 2019 Sep; Vol. 198, pp. 110718. Date of Electronic Publication: 2019 May 17.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Bacterial Proteins/*chemistry
Cytochrome c Group/*chemistry
Geobacter/*chemistry
Heme/*chemistry
Bacterial Proteins/isolation & purification ; Cytochrome c Group/isolation & purification ; Electron Spin Resonance Spectroscopy ; Histidine/chemistry ; Ligands ; Magnetic Phenomena ; Molecular Structure
SCR Organism :
Geobacter metallireducens
Czasopismo naukowe
Tytuł :
How Thermophilic Gram-Positive Organisms Perform Extracellular Electron Transfer: Characterization of the Cell Surface Terminal Reductase OcwA.
Autorzy :
Costa NL; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Lisbon, Portugal.
Hermann B; Institut für Biochemie, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany.
Fourmond V; Aix-Marseille Université, Centre National de la Recherche Scientifique (CNRS), Marseille, France.
Faustino MM; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Lisbon, Portugal.
Teixeira M; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Lisbon, Portugal.
Einsle O; Institut für Biochemie, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany .; BIOSS Centre for Biological Signalling Studies, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany.
Paquete CM; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Lisbon, Portugal .
Louro RO; Instituto de Tecnologia Química e Biológica António Xavier, Universidade NOVA de Lisboa, Lisbon, Portugal.
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Źródło :
MBio [mBio] 2019 Aug 20; Vol. 10 (4). Date of Electronic Publication: 2019 Aug 20.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Cell Membrane/*metabolism
Cytochrome c Group/*metabolism
Electron Transport/*physiology
Gram-Positive Bacteria/*metabolism
Oxidoreductases/*metabolism
Peptococcaceae/*metabolism
Cytochrome c Group/chemistry ; Electricity ; Electrons ; Heme/chemistry ; Heme/metabolism ; Kinetics ; Metals/metabolism ; Oxidation-Reduction ; Oxidoreductases/chemistry ; Protein Conformation
SCR Organism :
Thermincola potens
Czasopismo naukowe
Tytuł :
Crystal Structure of Cytochrome c L from the Aquatic Methylotrophic Bacterium Methylophaga aminisulfidivorans MP .
Autorzy :
Ghosh S; Department of Cellular and Molecular Medicine, Chosun University School of Medicine, Gwangju 61452, Republic of Korea.; Department of Biomedical Sciences, Graduate School of Chosun University, Gwangju 61452, Republic of Korea.
Dhanasingh I; Department of Cellular and Molecular Medicine, Chosun University School of Medicine, Gwangju 61452, Republic of Korea.; Department of Biomedical Sciences, Graduate School of Chosun University, Gwangju 61452, Republic of Korea.
Ryu J; Department of Energy Convergence, Graduate School of Chosun University, Gwangju 61452, Republic of Korea.
Kim SW; Department of Environmental Engineering, Chosun University, Gwangju 61452, Republic of Korea.; Department of Energy Convergence, Graduate School of Chosun University, Gwangju 61452, Republic of Korea.
Lee SH; Department of Cellular and Molecular Medicine, Chosun University School of Medicine, Gwangju 61452, Republic of Korea.; Department of Biomedical Sciences, Graduate School of Chosun University, Gwangju 61452, Republic of Korea.
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Źródło :
Journal of microbiology and biotechnology [J Microbiol Biotechnol] 2020 Aug 28; Vol. 30 (8), pp. 1261-1271.
Typ publikacji :
Journal Article
MeSH Terms :
Cytochrome c Group/*chemistry
Cytochrome c Group/*metabolism
Piscirickettsiaceae/*metabolism
Alcohol Oxidoreductases ; Amino Acid Sequence ; Binding Sites ; Catalytic Domain ; Crystallography, X-Ray ; Electron Transport ; Heme/chemistry ; Models, Molecular ; Oxidation-Reduction ; PQQ Cofactor/metabolism ; Protein Conformation
SCR Organism :
Methylophaga aminisulfidivorans
Czasopismo naukowe
Tytuł :
Preferential Binding of Cytochrome c to Anionic Ligand-Coated Gold Nanoparticles: A Complementary Computational and Experimental Approach.
Autorzy :
Tollefson EJ; Department of Chemistry , University of Minnesota-Twin Cities , Minneapolis , Minnesota 55455 , United States.
Allen CR; Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States.
Chong G; Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States.
Zhang X; Department of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Rozanov ND; Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States.
Bautista A; Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States.
Cerda JJ; Department of Chemistry , University of Minnesota-Twin Cities , Minneapolis , Minnesota 55455 , United States.
Pedersen JA; Environmental Chemistry and Technology Program , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.; Department of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Murphy CJ; Department of Chemistry , University of Illinois at Urbana-Champaign , Urbana , Illinois 61801 , United States.
Carlson EE; Department of Chemistry , University of Minnesota-Twin Cities , Minneapolis , Minnesota 55455 , United States.
Hernandez R; Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States.
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Źródło :
ACS nano [ACS Nano] 2019 Jun 25; Vol. 13 (6), pp. 6856-6866. Date of Electronic Publication: 2019 May 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Molecular Docking Simulation*
Cytochrome c Group/*chemistry
Metal Nanoparticles/*chemistry
3-Mercaptopropionic Acid/chemistry ; Animals ; Anions/chemistry ; Cytochrome c Group/metabolism ; Gold/chemistry ; Horses ; Ligands ; Lysine/chemistry ; Protein Binding
Czasopismo naukowe
Tytuł :
Geometrical Changes in the Hemes of Bacterial Surface c-Type Cytochromes Reveal Flexibility in Their Binding Affinity with Minerals.
Autorzy :
Tokunou Y; Department of Applied Chemistry , The University of Tokyo , 7-3-1 Hongo , Bunkyo-ku, Tokyo 113-8656 , Japan.; International Center for Materials Nanoarchitectonics , National Institute for Materials Science , 1-1 Namiki , Tsukuba , Ibaraki 305-0044 , Japan.
Okamoto A; International Center for Materials Nanoarchitectonics , National Institute for Materials Science , 1-1 Namiki , Tsukuba , Ibaraki 305-0044 , Japan.; Center for Functional Sensor & Actuator , National Institute for Materials Science , 1-1 Namiki , Tsukuba , Ibaraki 305-0044 , Japan.
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Źródło :
Langmuir : the ACS journal of surfaces and colloids [Langmuir] 2019 Jun 11; Vol. 35 (23), pp. 7529-7537. Date of Electronic Publication: 2018 Nov 05.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Cytochrome c Group/*chemistry
Heme/*chemistry
Heme/*metabolism
Minerals/*metabolism
Shewanella/*enzymology
Cytochrome c Group/metabolism ; Ferric Compounds/metabolism ; Protein Binding
SCR Organism :
Shewanella oneidensis
Czasopismo naukowe
Tytuł :
Structural and Functional Relevance of the Conserved Residue V13 in the Triheme Cytochrome PpcA from Geobacter sulfurreducens.
Autorzy :
Dantas JM; UCIBIO-Requimte, Departamento de Química , Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa , Campus Caparica, 2829-516 Caparica , Portugal.
Portela PC; UCIBIO-Requimte, Departamento de Química , Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa , Campus Caparica, 2829-516 Caparica , Portugal.
Fernandes AP; UCIBIO-Requimte, Departamento de Química , Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa , Campus Caparica, 2829-516 Caparica , Portugal.
Londer YY; Biosciences Division , Argonne National Laboratory , 9700 South Cass Avenue , Argonne , Illinois 60439 , United States.
Yang X; Biosciences Division , Argonne National Laboratory , 9700 South Cass Avenue , Argonne , Illinois 60439 , United States.
Duke NEC; Biosciences Division , Argonne National Laboratory , 9700 South Cass Avenue , Argonne , Illinois 60439 , United States.
Schiffer M; Biosciences Division , Argonne National Laboratory , 9700 South Cass Avenue , Argonne , Illinois 60439 , United States.
Pokkuluri PR; Biosciences Division , Argonne National Laboratory , 9700 South Cass Avenue , Argonne , Illinois 60439 , United States.
Salgueiro CA; UCIBIO-Requimte, Departamento de Química , Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa , Campus Caparica, 2829-516 Caparica , Portugal.
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Źródło :
The journal of physical chemistry. B [J Phys Chem B] 2019 Apr 11; Vol. 123 (14), pp. 3050-3060. Date of Electronic Publication: 2019 Apr 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Bacterial Proteins/*chemistry
Cytochrome c Group/*chemistry
Geobacter/*metabolism
Valine/*chemistry
Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Crystallography, X-Ray ; Cytochrome c Group/genetics ; Cytochrome c Group/metabolism ; Heme/chemistry ; Heme/metabolism ; Mutagenesis, Site-Directed ; Protein Structure, Tertiary
SCR Organism :
Geobacter sulfurreducens
Czasopismo naukowe
Tytuł :
Global proteome response of Synechocystis 6803 to extreme copper environments applied to control the activity of the inducible petJ promoter.
Autorzy :
Angeleri M; Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
Muth-Pawlak D; Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
Wilde A; Molecular Genetics of Prokaryotes, University of Freiburg, Freiburg, Germany.
Aro EM; Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
Battchikova N; Molecular Plant Biology, Department of Biochemistry, University of Turku, Turku, Finland.
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Źródło :
Journal of applied microbiology [J Appl Microbiol] 2019 Mar; Vol. 126 (3), pp. 826-841. Date of Electronic Publication: 2019 Jan 20.
Typ publikacji :
Journal Article
MeSH Terms :
Bacterial Proteins*/genetics
Bacterial Proteins*/metabolism
Cytochrome c Group*/genetics
Cytochrome c Group*/metabolism
Proteome*/drug effects
Proteome*/genetics
Synechocystis*/chemistry
Synechocystis*/drug effects
Synechocystis*/genetics
Synechocystis*/metabolism
Copper/*pharmacology
Promoter Regions, Genetic/*genetics
Czasopismo naukowe
Tytuł :
Rapid detection of cytochrome cd1-containing nitrite reductase encoding gene nirS of denitrifying bacteria with loop-mediated isothermal amplification assay.
Autorzy :
Zhang X; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266071, China.
Yang Q; College of Marine Sciences, Shanghai Ocean University, Shanghai, 201306, China.
Zhang Q; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.
Jiang X; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.; College of Marine Sciences, Shanghai Ocean University, Shanghai, 201306, China.
Wang X; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.
Li Y; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.
Zhao J; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China.
Qu K; Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China. .; Laboratory for Marine Fisheries Science and Food Production Processes, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266071, China. .
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Źródło :
Scientific reports [Sci Rep] 2020 Oct 05; Vol. 10 (1), pp. 16484. Date of Electronic Publication: 2020 Oct 05.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Cytochrome c Group/*genetics
Molecular Diagnostic Techniques/*methods
Nitrite Reductases/*genetics
Nucleic Acid Amplification Techniques/*methods
Pseudomonas aeruginosa/*genetics
DNA/genetics ; DNA Primers/genetics ; Sensitivity and Specificity
SCR Protocol :
LAMP assay
Czasopismo naukowe
Tytuł :
Identification of an extracytoplasmic function sigma factor that facilitates c-type cytochrome maturation and current generation under electrolyte-flow conditions in Shewanella oneidensis MR-1.
Autorzy :
Koga R; School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
Matsumoto A; School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
Kouzuma A; School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
Watanabe K; School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
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Źródło :
Environmental microbiology [Environ Microbiol] 2020 Sep; Vol. 22 (9), pp. 3671-3684. Date of Electronic Publication: 2020 Jul 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Shewanella/*genetics
Bacterial Proteins/genetics ; Cytochrome c Group/genetics ; Electrodes ; Electrolytes ; Electron Transport ; Sigma Factor/genetics ; Transcriptome
SCR Organism :
Shewanella oneidensis
Czasopismo naukowe
Tytuł :
Stability of cytochromes c' from psychrophilic and piezophilic Shewanella species: implications for complex multiple adaptation to low temperature and high hydrostatic pressure.
Autorzy :
Suka A; Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 1-4-4 Kagamiyama, Hiroshima, 739-8528, Japan.
Oki H; Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kato Y; Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 1-4-4 Kagamiyama, Hiroshima, 739-8528, Japan.
Kawahara K; Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Ohkubo T; Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Maruno T; Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kobayashi Y; Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Fujii S; Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 1-4-4 Kagamiyama, Hiroshima, 739-8528, Japan.
Wakai S; Graduate School of Science, Technology, and Innovation, Kobe University, 1-1 Rokkodai-cho, Nada-ku, Kobe, 657-8501, Japan.
Lisdiana L; Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 1-4-4 Kagamiyama, Hiroshima, 739-8528, Japan.; Department of Biology, Universitas Negeri Surabaya, Kampus Unesa Ketintang, Surabaya, 60231, Indonesia.
Sambongi Y; Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 1-4-4 Kagamiyama, Hiroshima, 739-8528, Japan. .
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Źródło :
Extremophiles : life under extreme conditions [Extremophiles] 2019 Mar; Vol. 23 (2), pp. 239-248. Date of Electronic Publication: 2019 Jan 28.
Typ publikacji :
Journal Article
MeSH Terms :
Adaptation, Physiological*
Bacterial Proteins/*metabolism
Cytochrome c Group/*metabolism
Shewanella/*metabolism
Bacterial Proteins/chemistry ; Cold Temperature ; Cytochrome c Group/chemistry ; Enzyme Stability ; Hydrostatic Pressure ; Shewanella/genetics
Czasopismo naukowe
Tytuł :
Kinetics of trifurcated electron flow in the decaheme bacterial proteins MtrC and MtrF.
Autorzy :
Jiang X; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom.
Burger B; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom.; Department of Chemistry, Technische Universität München, D-85747 Garching, Germany.
Gajdos F; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom.
Bortolotti C; Department of Life Sciences, Universita degli Studi di Modena e Reggio Emilia, 41121 Modena, Italy.
Futera Z; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom.
Breuer M; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom.
Blumberger J; Department of Physics and Astronomy, University College London, London WC1E 6BT, United Kingdom; .; Institute for Advanced Study, Technische Universität München, D-85748 Garching, Germany.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2019 Feb 26; Vol. 116 (9), pp. 3425-3430. Date of Electronic Publication: 2019 Feb 12.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Models, Molecular*
Cytochrome c Group/*genetics
Electron Transport/*genetics
Shewanella/*genetics
Amino Acid Sequence/genetics ; Bacterial Outer Membrane Proteins/chemistry ; Bacterial Outer Membrane Proteins/genetics ; Cytochrome c Group/chemistry ; Cytochromes/chemistry ; Cytochromes/genetics ; Electrons ; Heme/chemistry ; Heme/genetics ; Oxidation-Reduction ; Shewanella/chemistry ; Shewanella/pathogenicity
Czasopismo naukowe
Tytuł :
Reductive nitrosylation of ferric microperoxidase-11.
Autorzy :
Ascenzi P; Interdepartmental Laboratory of Electron Microscopy, Roma Tre University, Via della Vasca Navale 79, 00146, Rome, Italy. .
De Simone G; Department of Sciences, Roma Tre University, Viale Gugliemo Marconi 446, 00146, Rome, Italy.
Sbardella D; Department of Clinical Sciences and Translational Medicine, University of Roma 'Tor Vergata', Via Montpellier 1, 00133, Rome, Italy.; Interuniversity Consortium for the Research on the Chemistry of Metals in Biological Systems, Via Celso Ulpiani 27, 70126, Bari, Italy.
Coletta M; Department of Clinical Sciences and Translational Medicine, University of Roma 'Tor Vergata', Via Montpellier 1, 00133, Rome, Italy.; Interuniversity Consortium for the Research on the Chemistry of Metals in Biological Systems, Via Celso Ulpiani 27, 70126, Bari, Italy.
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Źródło :
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry [J Biol Inorg Chem] 2019 Feb; Vol. 24 (1), pp. 21-29. Date of Electronic Publication: 2018 Nov 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Cytochrome c Group/*metabolism
Peroxidases/*metabolism
Animals ; Cytochrome c Group/chemistry ; Horses ; Iron Compounds/chemistry ; Iron Compounds/metabolism ; Myocardium/enzymology ; Nitroso Compounds/chemistry ; Nitroso Compounds/metabolism ; Oxidation-Reduction ; Peroxidases/chemistry
Czasopismo naukowe
Tytuł :
Taxonomic distribution, structure/function relationship and metabolic context of the two families of sulfide dehydrogenases: SQR and FCSD.
Autorzy :
Sousa FM; Instituto de Tecnologia Química e Biológica - António Xavier, Universidade Nova de Lisboa, Av. da Republica EAN, 2780-157 Oeiras, Portugal.
Pereira JG; Instituto de Tecnologia Química e Biológica - António Xavier, Universidade Nova de Lisboa, Av. da Republica EAN, 2780-157 Oeiras, Portugal.
Marreiros BC; Instituto de Tecnologia Química e Biológica - António Xavier, Universidade Nova de Lisboa, Av. da Republica EAN, 2780-157 Oeiras, Portugal.
Pereira MM; Instituto de Tecnologia Química e Biológica - António Xavier, Universidade Nova de Lisboa, Av. da Republica EAN, 2780-157 Oeiras, Portugal; University of Lisbon, Faculty of Sciences, BioISI - Biosystems & Integrative Sciences Institute, Campo Grande, C8, 1749-016 Lisboa, Portugal. Electronic address: .
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Źródło :
Biochimica et biophysica acta. Bioenergetics [Biochim Biophys Acta Bioenerg] 2018 Sep; Vol. 1859 (9), pp. 742-753. Date of Electronic Publication: 2018 Apr 21.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Cytochrome c Group/*chemistry
Cytochrome c Group/*classification
Flavin-Adenine Dinucleotide/*metabolism
Oxidoreductases/*chemistry
Oxidoreductases/*classification
Quinone Reductases/*chemistry
Quinone Reductases/*classification
Sulfides/*metabolism
Bacterial Proteins/chemistry ; Bacterial Proteins/classification ; Bacterial Proteins/metabolism ; Biocatalysis ; Cytochrome c Group/metabolism ; Kinetics ; Models, Molecular ; Oxidation-Reduction ; Oxidoreductases/metabolism ; Protein Conformation ; Quinone Reductases/metabolism ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł :
Structure of the alternative complex III in a supercomplex with cytochrome oxidase.
Autorzy :
Sun C; Department of Biochemistry, University of Illinois, Urbana, IL, USA.; NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana, IL, USA.
Benlekbir S; Molecular Medicine Program, The Hospital for Sick Children Research Institute, Toronto, Ontario, Canada.
Venkatakrishnan P; Department of Biochemistry, University of Illinois, Urbana, IL, USA.; Department of Microbiology and Molecular Genetics, University of California, Davis, Davis, CA, USA.
Wang Y; Department of Biochemistry, University of Illinois, Urbana, IL, USA.; NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana, IL, USA.; Center for Biophysics and Quantitative Biology, University of Illinois, Urbana, IL, USA.
Hong S; Department of Biochemistry, University of Illinois, Urbana, IL, USA.
Hosler J; Department of Biochemistry, University of Mississippi Medical Center, Jackson, MS, USA.
Tajkhorshid E; Department of Biochemistry, University of Illinois, Urbana, IL, USA. .; NIH Center for Macromolecular Modeling and Bioinformatics, Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana, IL, USA. .; Center for Biophysics and Quantitative Biology, University of Illinois, Urbana, IL, USA. .
Rubinstein JL; Molecular Medicine Program, The Hospital for Sick Children Research Institute, Toronto, Ontario, Canada. .; Department of Medical Biophysics, The University of Toronto, Toronto, Ontario, Canada. .; Department of Biochemistry, The University of Toronto, Toronto, Ontario, Canada. .
Gennis RB; Department of Biochemistry, University of Illinois, Urbana, IL, USA. .
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Źródło :
Nature [Nature] 2018 May; Vol. 557 (7703), pp. 123-126. Date of Electronic Publication: 2018 Apr 25.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Cryoelectron Microscopy*
Cytochrome c Group/*chemistry
Cytochrome c Group/*ultrastructure
Cytochromes a/*chemistry
Cytochromes a/*ultrastructure
Cytochromes a3/*chemistry
Cytochromes a3/*ultrastructure
Electron Transport Complex III/*chemistry
Electron Transport Complex III/*ultrastructure
Flavobacterium/*enzymology
Cysteine/chemistry ; Cysteine/metabolism ; Cytochrome c Group/metabolism ; Cytochromes a/metabolism ; Cytochromes a3/metabolism ; Electron Transport Complex III/metabolism ; Heme/analogs & derivatives ; Heme/chemistry ; Lipid Bilayers/chemistry ; Lipid Bilayers/metabolism ; Lipids/chemistry ; Models, Molecular ; Nanostructures/chemistry ; Nanostructures/ultrastructure ; Oxidation-Reduction ; Protein Subunits/chemistry ; Protein Subunits/metabolism
Czasopismo naukowe

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