Temat: "DNA, Bacterial" - OpacWWW

Skocz do pozycji: 1.

Tytuł:: Choice of DNA extraction method affects stool microbiome recovery and subsequent phenotypic association analyses.
Autorzy:: Fernández-Pato A; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Sinha T; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Gacesa R; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.; Department of Gastroenterology and Hepatology, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Andreu-Sánchez S; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.; Department of Pediatrics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Gois MFB; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Gelderloos-Arends J; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Jansen DBH; Department of Gastroenterology and Hepatology, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Kruk M; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Jaeger M; Department of Internal Medicine and Radboud Center for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Joosten LAB; Department of Internal Medicine and Radboud Center for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.; Department of Medical Genetics, Iuliu Hatieganu University of Medicine and Pharmacy, Cluj-Napoca, Romania.
Netea MG; Department of Internal Medicine and Radboud Center for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.; Department of Genomics and Immunoregulation, Life and Medical Sciences Institute, University of Bonn, Bonn, Germany.
Weersma RK; Department of Gastroenterology and Hepatology, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Wijmenga C; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Harmsen HJM; Medical Microbiology and Infection Prevention, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Fu J; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.; Department of Pediatrics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Zhernakova A; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands.
Kurilshikov A; Department of Genetics, University of Groningen, University Medical Center Groningen, Groningen, 9713GZ, the Netherlands. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 16; Vol. 14 (1), pp. 3911. Date of Electronic Publication: 2024 Feb 16.
Typ publikacji:: Journal Article
MeSH Terms:: Microbiota*/genetics
Gastrointestinal Microbiome*/genetics
Humans ; DNA, Bacterial/genetics ; DNA, Bacterial/analysis ; RNA, Ribosomal, 16S/genetics ; DNA ; Sequence Analysis, DNA ; Feces/microbiology ; Metagenomics/methods

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Skocz do pozycji: 2.

Tytuł:: Adaptation and validation of a quantitative vanA/vanB DNA screening assay on a high-throughput PCR system.
Autorzy:: Giersch K; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Tanida K; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Both A; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Nörz D; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Heim D; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Rohde H; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Aepfelbacher M; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany.
Lütgehetmann M; Institute of Medical Microbiology, Virology and Hygiene, University Medical Centre Hamburg-Eppendorf (UKE), Martinistraße 52, 20246, Hamburg, Germany. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 12; Vol. 14 (1), pp. 3523. Date of Electronic Publication: 2024 Feb 12.
Typ publikacji:: Journal Article
MeSH Terms:: Vancomycin-Resistant Enterococci*/genetics
Gram-Positive Bacterial Infections*/microbiology
Humans ; Predictive Value of Tests ; Real-Time Polymerase Chain Reaction ; DNA ; DNA, Bacterial/genetics ; DNA, Bacterial/analysis ; Bacterial Proteins/genetics ; Anti-Bacterial Agents

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Skocz do pozycji: 3.

Tytuł:: In-Depth Genome Characterization and Pan-Genome Analysis of Strain KMM 296, a Producer of Highly Active Alkaline Phosphatase; Proposal for the Reclassification of Cobetia litoralis and Cobetia pacifica as the Later Heterotypic Synonyms of Cobetia amphilecti and Cobetia marina , and Emended Description of the Species Cobetia amphilecti and Cobetia marina .
Autorzy:: Nedashkovskaya O; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.
Balabanova L; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.; Institute of Biotechnology, Bioengineering and Food Systems, Advanced Engineering School, Far Eastern Federal University, Ajax Bay 10, Russky Island, Vladivostok 690922, Russia.
Otstavnykh N; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.
Zhukova N; A.V. Zhirmunsky National Scientific Center of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, Palchevskogo Street 17, Vladivostok 690041, Russia.
Detkova E; Winogradsky Institute of Microbiology, Russian Academy of Sciences, Federal Research Centre 'Fundamentals of Biotechnology', Leninsky Ave. 33, bld. 2, Moscow 119071, Russia.
Seitkalieva A; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.; Institute of Biotechnology, Bioengineering and Food Systems, Advanced Engineering School, Far Eastern Federal University, Ajax Bay 10, Russky Island, Vladivostok 690922, Russia.
Bystritskaya E; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.; Institute of Biotechnology, Bioengineering and Food Systems, Advanced Engineering School, Far Eastern Federal University, Ajax Bay 10, Russky Island, Vladivostok 690922, Russia.
Noskova Y; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.
Tekutyeva L; Institute of Biotechnology, Bioengineering and Food Systems, Advanced Engineering School, Far Eastern Federal University, Ajax Bay 10, Russky Island, Vladivostok 690922, Russia.
Isaeva M; G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku 159, Vladivostok 690022, Russia.; Pokaż więcej
Źródło:: Biomolecules [Biomolecules] 2024 Feb 06; Vol. 14 (2). Date of Electronic Publication: 2024 Feb 06.
Typ publikacji:: Journal Article
MeSH Terms:: Alkaline Phosphatase*/genetics
Halomonadaceae*/genetics
Adolescent ; Child ; Humans ; RNA, Ribosomal, 16S/genetics ; Fatty Acids/chemistry ; Coloring Agents ; Phylogeny ; DNA, Bacterial/genetics ; DNA, Bacterial/chemistry
SCR Organism:: Cobetia marina; Cobetia amphilecti; Cobetia pacifica; Cobetia litoralis

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Skocz do pozycji: 4.

Tytuł:: Zoothamnium mariella sp. nov., a marine, colonial ciliate with an atypcial growth pattern, and its ectosymbiont Candidatus Fusimicrobium zoothamnicola gen. nov., sp. nov.
Autorzy:: Kendlbacher V; Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria.
Winter TMR; Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria.
Bright M; Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria.; Pokaż więcej
Źródło:: PloS one [PLoS One] 2024 Apr 01; Vol. 19 (4), pp. e0300758. Date of Electronic Publication: 2024 Apr 01 (Print Publication: 2024).
Typ publikacji:: Journal Article
MeSH Terms:: Ciliophora*/genetics
Gammaproteobacteria*/genetics
In Situ Hybridization, Fluorescence ; Phylogeny ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA ; DNA, Bacterial

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Skocz do pozycji: 5.

Tytuł:: Symbiotic efficiency of Rhizobium leguminosarum sv. trifolii strains originating from the subpolar and temperate climate regions.
Autorzy:: Janczarek M; Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland. .
Kozieł M; Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland.
Adamczyk P; Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland.
Buczek K; Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland.
Kalita M; Department of Genetics and Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland.
Gromada A; Department of Industrial and Environmental Microbiology, Faculty of Biology and Biotechnology, Institute of Biological Sciences, Maria Curie-Skłodowska University, 19 Akademicka, 20-033, Lublin, Poland.
Mordzińska-Rak A; Department of Biochemistry and Molecular Biology, Faculty of Medical Studies, Medical University in Lublin, 1 Chodźki, 20-093, Lublin, Poland.
Polakowski C; Department of Natural Environment Biogeochemistry, Institute of Agrophysics, Polish Academy of Sciences, 4 Doświadczalna, 20-290, Lublin, Poland.
Bieganowski A; Department of Natural Environment Biogeochemistry, Institute of Agrophysics, Polish Academy of Sciences, 4 Doświadczalna, 20-290, Lublin, Poland.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Mar 15; Vol. 14 (1), pp. 6264. Date of Electronic Publication: 2024 Mar 15.
Typ publikacji:: Journal Article
MeSH Terms:: Rhizobium leguminosarum*/genetics
Fabaceae*/genetics
Trifolium*/genetics
Rhizobium*/genetics
Symbiosis/genetics ; Nitrogen Fixation ; Phylogeny ; DNA, Bacterial/genetics

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Skocz do pozycji: 6.

Tytuł:: Widespread prevalence of a methylation-dependent switch to activate an essential DNA damage response in bacteria.
Autorzy:: Kamat A; National Centre for Biological Sciences (TIFR), Bengaluru, India.
Tran NT; John Innes Centre, Department of Molecular Microbiology, Colney Lane, Norwich, United Kingdom.
Sharda M; National Centre for Biological Sciences (TIFR), Bengaluru, India.
Sontakke N; National Centre for Biological Sciences (TIFR), Bengaluru, India.
Le TBK; John Innes Centre, Department of Molecular Microbiology, Colney Lane, Norwich, United Kingdom.
Badrinarayanan A; National Centre for Biological Sciences (TIFR), Bengaluru, India.; Pokaż więcej
Źródło:: PLoS biology [PLoS Biol] 2024 Mar 11; Vol. 22 (3), pp. e3002540. Date of Electronic Publication: 2024 Mar 11 (Print Publication: 2024).
Typ publikacji:: Journal Article
MeSH Terms:: Bacteria*/genetics
DNA Methylation*/genetics
Prevalence ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Escherichia coli/genetics ; Escherichia coli/metabolism ; DNA Repair ; Protein Processing, Post-Translational ; DNA Damage/genetics ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; DNA, Bacterial/metabolism

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Skocz do pozycji: 7.

Tytuł:: Whole-genome sequencing and analysis of Chryseobacterium arthrosphaerae from Rana nigromaculata.
Autorzy:: Zhu L; Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Liu H; College of Bioengineering, Tianjin University of Science and Technology, Tianjin, 300457, China.
Li X; Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Shi Y; Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Yin X; Business Integrated Services Center of Donghu Town, Shaoxing City in Zhejiang Province, Zhejiang Shaoxing, 312001, China.
Pi X; Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2024 Mar 08; Vol. 24 (1), pp. 80. Date of Electronic Publication: 2024 Mar 08.
Typ publikacji:: Journal Article
MeSH Terms:: Chryseobacterium*/genetics
Animals ; DNA, Bacterial/genetics ; Phylogeny ; Whole Genome Sequencing ; Anti-Bacterial Agents/pharmacology ; Anti-Bacterial Agents/therapeutic use ; Ranidae ; Genome, Bacterial
SCR Organism:: Chryseobacterium arthrosphaerae

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Skocz do pozycji: 8.

Tytuł:: Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
Autorzy:: Hong BY; Dr. Kiran C. Patel College of Allopathic Medicine, Nova Southeastern University, Fort Lauderdale, FL 33328, USA.; Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.
Driscoll M; Intus Biosciences, Farmington, CT 06032, USA.
Gratalo D; Intus Biosciences, Farmington, CT 06032, USA.
Jarvie T; Intus Biosciences, Farmington, CT 06032, USA.
Weinstock GM; Jackson Laboratory for Genomic Medicine, Farmington, CT 06032, USA.; Pokaż więcej
Źródło:: International journal of molecular sciences [Int J Mol Sci] 2024 Mar 04; Vol. 25 (5). Date of Electronic Publication: 2024 Mar 04.
Typ publikacji:: Journal Article
MeSH Terms:: Microbiota*/genetics
Humans ; RNA, Ribosomal, 16S/genetics ; Sequence Analysis, DNA/methods ; Genes, rRNA ; Reproducibility of Results ; DNA, Bacterial/genetics ; Bacteria/genetics ; High-Throughput Nucleotide Sequencing/methods

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Skocz do pozycji: 9.

Tytuł:: Chimeric systems composed of swapped Tra subunits between distantly-related F plasmids reveal striking plasticity among type IV secretion machines.
Autorzy:: Kishida K; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Li YG; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Ogawa-Kishida N; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Khara P; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Al Mamun AAM; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Bosserman RE; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.
Christie PJ; Department of Microbiology and Molecular Genetics, McGovern Medical School at UTHealth, Houston, Texas, United States of America.; Pokaż więcej
Źródło:: PLoS genetics [PLoS Genet] 2024 Mar 04; Vol. 20 (3), pp. e1011088. Date of Electronic Publication: 2024 Mar 04 (Print Publication: 2024).
Typ publikacji:: Journal Article
MeSH Terms:: F Factor*
Type IV Secretion Systems*/genetics
Type IV Secretion Systems*/chemistry
Type IV Secretion Systems*/metabolism
Fimbriae Proteins/genetics ; Plasmids/genetics ; DNA, Bacterial ; Bacterial Proteins/metabolism

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Skocz do pozycji: 10.

Tytuł:: Anaerobic flora, Selenomonas ruminis sp. nov., and the bacteriocinogenic Ligilactobacillus salivarius strain MP3 from crossbred-lactating goats.
Autorzy:: Poothong S; Department of Animal Husbandry, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Tanasupawat S; Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, 10330, Thailand. .
Chanpongsang S; Department of Animal Husbandry, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand.
Kingkaew E; Department of Biology, School of Sciences, King Mongkut's Institute of Technology Ladkrabang, Bangkok, 10520, Thailand.
Nuengjamnong C; Department of Animal Husbandry, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand. .; Center of Excellence for Food and Water Risk Analysis (FAWRA), Faculty of Veterinary Science, Chulalongkorn University, Bangkok, 10330, Thailand. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 28; Vol. 14 (1), pp. 4838. Date of Electronic Publication: 2024 Feb 28.
Typ publikacji:: Journal Article
MeSH Terms:: Fatty Acids*/analysis
Ligilactobacillus salivarius*
Animals ; Female ; Selenomonas/genetics ; Anaerobiosis ; RNA, Ribosomal, 16S/genetics ; Lactation ; DNA ; Phylogeny ; Sequence Analysis, DNA ; DNA, Bacterial/genetics ; Bacterial Typing Techniques ; Nucleic Acid Hybridization

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Skocz do pozycji: 11.

Tytuł:: Optimized bacterial community characterization through full-length 16S rRNA gene sequencing utilizing MinION nanopore technology.
Autorzy:: Bertolo A; SCI Population Biobanking & Translational Research Group, Swiss Paraplegic Research, Nottwil, Switzerland.; Department of Orthopaedic Surgery, University of Bern, Bern Inselspital, Bern, Switzerland.
Valido E; SCI Population Biobanking & Translational Research Group, Swiss Paraplegic Research, Nottwil, Switzerland.
Stoyanov J; SCI Population Biobanking & Translational Research Group, Swiss Paraplegic Research, Nottwil, Switzerland. .; Institute of Social and Preventive Medicine, University of Bern, Bern, Switzerland. .; Pokaż więcej
Źródło:: BMC microbiology [BMC Microbiol] 2024 Feb 16; Vol. 24 (1), pp. 58. Date of Electronic Publication: 2024 Feb 16.
Typ publikacji:: Journal Article
MeSH Terms:: Nanopores*
RNA, Ribosomal, 16S/genetics ; Taq Polymerase/genetics ; Genes, rRNA ; Sequence Analysis, DNA/methods ; DNA, Bacterial/genetics ; Bacteria/genetics ; High-Throughput Nucleotide Sequencing/methods

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Skocz do pozycji: 12.

Tytuł:: Automated sepsis detection with vancomycin- and allantoin-polydopamine magnetic nanoparticles.
Autorzy:: Abafogi AT; School of Mechanical Engineering, Sungkyunkwan University, Suwon, 16419, Korea.
Lee J; School of Mechanical Engineering, Sungkyunkwan University, Suwon, 16419, Korea.; KingoBio Inc., Seoul, 08390, Korea.
Kim J; School of Mechanical Engineering, Sungkyunkwan University, Suwon, 16419, Korea.
Lee SW; Department of Pulmonology and Critical Care Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, 05505, Korea.
Jang S; Department of Laboratory Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, 05505, Korea.
Park S; School of Mechanical Engineering, Sungkyunkwan University, Suwon, 16419, Korea. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 14; Vol. 14 (1), pp. 3693. Date of Electronic Publication: 2024 Feb 14.
Typ publikacji:: Journal Article
MeSH Terms:: Magnetite Nanoparticles*
Sepsis*
Indoles*
Polymers*
Humans ; Vancomycin ; Allantoin ; DNA, Bacterial/genetics ; Bacteria/genetics

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Skocz do pozycji: 13.

Tytuł:: Improving the efficiency of DNA extraction from iron incrustations and oilfield-produced water.
Autorzy:: Foysal MJ; Curtin Corrosion Centre, Western Australian School of Mines, Minerals and Energy, Curtin University, Bentley, WA, Australia.; School of Environmental and Life Sciences, The University of Newcastle, Callaghan, NSW, Australia.; Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, Bangladesh.
Salgar-Chaparro SJ; Curtin Corrosion Centre, Western Australian School of Mines, Minerals and Energy, Curtin University, Bentley, WA, Australia. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 05; Vol. 14 (1), pp. 2954. Date of Electronic Publication: 2024 Feb 05.
Typ publikacji:: Journal Article
MeSH Terms:: Microbiota*/genetics
DNA, Environmental*
DNA, Bacterial/genetics ; Iron ; Oil and Gas Fields ; DNA/genetics

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Skocz do pozycji: 14.

Tytuł:: Pantoea trifolii sp. nov., a novel bacterium isolated from Trifolium rubens root nodules.
Autorzy:: Wdowiak-Wróbel S; Department of Genetics and Microbiology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland.
Kalita M; Department of Genetics and Microbiology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland. .
Palusińska-Szysz M; Department of Genetics and Microbiology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland.
Marek-Kozaczuk M; Department of Genetics and Microbiology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland.
Sokołowski W; Department of Genetics and Microbiology, Institute of Biological Sciences, Maria Curie-Skłodowska University, Akademicka 19, 20-033, Lublin, Poland.
Coutinho TA; Department of Biochemistry, Genetics and Microbiology, Centre for Microbial Ecology and Genomics/Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria, 0002, South Africa.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2024 Feb 01; Vol. 14 (1), pp. 2698. Date of Electronic Publication: 2024 Feb 01.
Typ publikacji:: Journal Article
MeSH Terms:: Pantoea*/genetics
Trifolium*/genetics
Sequence Analysis, DNA ; RNA, Ribosomal, 16S/genetics ; DNA ; Phylogeny ; DNA, Bacterial/genetics ; Fatty Acids/analysis ; Bacterial Typing Techniques ; Nucleic Acid Hybridization

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Skocz do pozycji: 15.

Tytuł:: An ancient bacterial gene set the stage for human sight.
Autorzy:: Pennisi E; Pokaż więcej
Źródło:: Science (New York, N.Y.) [Science] 2023 Apr 14; Vol. 380 (6641), pp. 119. Date of Electronic Publication: 2023 Apr 13.
Typ publikacji:: Wiadomości
MeSH Terms:: Biological Evolution*
DNA, Bacterial*/genetics
Eye*
Genes, Bacterial*
Retinol-Binding Proteins*/genetics
Vertebrates*/genetics
Vision, Ocular*/genetics
Animals ; Humans

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Skocz do pozycji: 16.

Tytuł:: Recovery of microbial DNA by agar-containing solution from extremely low-biomass specimens including skin.
Autorzy:: Kurokawa R; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan.; Graduate School of Advanced Science and Engineering, Cooperative Major in Advanced Health Science, Waseda University, 3-4-1 Ohkubo Shinjuku-Ku, Tokyo, 169-8555, Japan.
Masuoka H; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan.
Takayasu L; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan.; Department of Human Ecology, The University of Tokyo, Tokyo, Japan.; Nancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA.
Kiguchi Y; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan.; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Ogata Y; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan.
Miura-Kawatsu R; Division of Research and Development, Biogenomics, Co., Ltd, Nagasaki, Japan.
Hattori M; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan. .; Graduate School of Advanced Science and Engineering, Cooperative Major in Advanced Health Science, Waseda University, 3-4-1 Ohkubo Shinjuku-Ku, Tokyo, 169-8555, Japan. .
Suda W; Laboratory for Microbiome Sciences, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-Cho Tsurumi-Ku, Yokohama, Kanagawa, 230-0045, Japan. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2023 Nov 11; Vol. 13 (1), pp. 19666. Date of Electronic Publication: 2023 Nov 11.
Typ publikacji:: Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:: DNA*/genetics
Humans ; DNA, Bacterial/genetics ; DNA, Bacterial/analysis ; Agar ; Sequence Analysis, DNA/methods ; RNA, Ribosomal, 16S/genetics ; Biomass

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Skocz do pozycji: 17.

Tytuł:: Changes of the bacterial composition in duodenal fluid from patients with liver cirrhosis and molecular bacterascites.
Autorzy:: Höppner J; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Krohn S; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
van den Munckhof EHA; DDL Diagnostic Laboratory, Rijswijk, The Netherlands.
Kallies R; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Herber A; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Zeller K; Endocrinology and Nephrology, University Hospital Leipzig, Leipzig, Germany.
Tünnemann J; Division of Gastroenterology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Matz-Soja M; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Chatzinotas A; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Böhm S; Max von Pettenkofer-Institute for Hygiene and Clinical Microbiology, Ludwig Maximilians-University, Munich, Germany.
Hoffmeister A; Division of Gastroenterology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Berg T; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany. .
Engelmann C; Division of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.; Institute for Liver and Digestive Health, Royal Free Campus, University College London, London, UK.; Department of Hepatology and Gastroenterology, Campus Virchow-Klinikum, Charité - Universitaetsmedizin Berlin, Berlin, Germany.; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2023 Dec 27; Vol. 13 (1), pp. 23001. Date of Electronic Publication: 2023 Dec 27.
Typ publikacji:: Journal Article
MeSH Terms:: Ascites*/complications
Ascitic Fluid*/microbiology
Humans ; DNA, Bacterial/analysis ; Liver Cirrhosis/complications ; Bacteria/genetics ; Fibrosis ; RNA, Ribosomal, 16S/genetics

Czasopismo naukowe

na półce

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Skocz do pozycji: 18.

Tytuł:: Validation of method for faecal sampling in cats and dogs for faecal microbiome analysis.
Autorzy:: Langon X; Royal Canin Sas, 650 avenue de la Petite Camargue, AIMARGUES Cedex, CS, 10309, 30470, France. .; Pokaż więcej
Źródło:: BMC veterinary research [BMC Vet Res] 2023 Dec 16; Vol. 19 (1), pp. 274. Date of Electronic Publication: 2023 Dec 16.
Typ publikacji:: Journal Article
MeSH Terms:: Cat Diseases*
Dog Diseases*
Microbiota*
Cats ; Animals ; Dogs ; Feces/microbiology ; Bacteria/genetics ; DNA, Bacterial/genetics

Czasopismo naukowe

na półce

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Skocz do pozycji: 19.

Tytuł:: Benchmarking DNA isolation methods for marine metagenomics.
Autorzy:: Demkina A; Skolkovo Institute of Science and Technology, Moscow, Russia.; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.
Slonova D; Skolkovo Institute of Science and Technology, Moscow, Russia.
Mamontov V; Skolkovo Institute of Science and Technology, Moscow, Russia.
Konovalova O; Marine Research Center of Lomonosov Moscow State University, Moscow, Russia.; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
Yurikova D; Marine Research Center of Lomonosov Moscow State University, Moscow, Russia.; Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia.
Rogozhin V; Marine Research Center of Lomonosov Moscow State University, Moscow, Russia.; Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia.
Belova V; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Pirogov Russian National Research Medical University, Moscow, Russia.
Korostin D; Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Pirogov Russian National Research Medical University, Moscow, Russia.
Sutormin D; Skolkovo Institute of Science and Technology, Moscow, Russia. .
Severinov K; Waksman Institute of Microbiology, Piscataway, USA. .
Isaev A; Skolkovo Institute of Science and Technology, Moscow, Russia. .; Pokaż więcej
Źródło:: Scientific reports [Sci Rep] 2023 Dec 13; Vol. 13 (1), pp. 22138. Date of Electronic Publication: 2023 Dec 13.
Typ publikacji:: Journal Article
MeSH Terms:: Benchmarking*
DNA*/genetics
RNA, Ribosomal, 16S/genetics ; Reproducibility of Results ; Sequence Analysis, DNA/methods ; Metagenomics/methods ; DNA, Bacterial/genetics

Czasopismo naukowe

na półce

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Skocz do pozycji: 20.

Tytuł:: Developing novel antimicrobials by combining cancer chemotherapeutics with bacterial DNA repair inhibitors.
Autorzy:: Bernacchia L; School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Gupta A; School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Paris A; School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Moores AA; School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.
Kad NM; School of Biosciences, University of Kent, Canterbury, Kent, United Kingdom.; Pokaż więcej
Źródło:: PLoS pathogens [PLoS Pathog] 2023 Dec 07; Vol. 19 (12), pp. e1011875. Date of Electronic Publication: 2023 Dec 07 (Print Publication: 2023).
Typ publikacji:: Journal Article
MeSH Terms:: Anti-Infective Agents*
Neoplasms*/drug therapy
Humans ; DNA, Bacterial ; Escherichia coli/genetics ; DNA Repair ; Cisplatin/pharmacology ; Cisplatin/therapeutic use ; DNA Damage

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na półce

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