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Tytuł:
De Novo Long-Read Whole-Genome Assemblies and the Comparative Pan-Genome Analysis of Ascochyta Blight Pathogens Affecting Field Pea.
Autorzy:
Ogaji YO; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Melbourne, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Melbourne, VIC 3086, Australia.
Lee RC; Centre for Crop and Disease Management, School of Molecular and Life Sciences, Curtin University, Perth, WA 6102, Australia.
Sawbridge TI; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Melbourne, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Melbourne, VIC 3086, Australia.
Cocks BG; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Melbourne, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Melbourne, VIC 3086, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Melbourne, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Melbourne, VIC 3086, Australia.
Kaur S; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Melbourne, VIC 3083, Australia.
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Źródło:
Journal of fungi (Basel, Switzerland) [J Fungi (Basel)] 2022 Aug 22; Vol. 8 (8). Date of Electronic Publication: 2022 Aug 22.
Typ publikacji:
Journal Article
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
BayesR3 enables fast MCMC blocked processing for largescale multi-trait genomic prediction and QTN mapping analysis.
Autorzy:
Breen EJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
MacLeod IM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Ho PN; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Haile-Mariam M; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Pryce JE; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
Thomas CD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
Goddard ME; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, VIC, 3052, Australia.
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Źródło:
Communications biology [Commun Biol] 2022 Jul 05; Vol. 5 (1), pp. 661. Date of Electronic Publication: 2022 Jul 05.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome*
Genomics*/methods
Animals ; Bayes Theorem ; Cattle ; Markov Chains ; Phenotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Correction to: Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle.
Autorzy:
Dorji J; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia. .; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
Vander Jagt CJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Garner JB; Agriculture Victoria, Ellinbank Dairy Centre, Ellinbank, VIC, 3822, Australia.
Marett LC; Agriculture Victoria, Ellinbank Dairy Centre, Ellinbank, VIC, 3822, Australia.
Mason BA; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Reich CM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Xiang R; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; Faculty of Veterinary & Agricultural Science, University of Melbourne, Parkville, VIC, 3052, Australia.
Clark EL; The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, Scotland, UK.
Cocks BG; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Chamberlain AJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
MacLeod IM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Daetwyler HD; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
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Źródło:
BMC genomics [BMC Genomics] 2022 Apr 20; Vol. 23 (1), pp. 315. Date of Electronic Publication: 2022 Apr 20.
Typ publikacji:
Published Erratum
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome-wide association studies dissect the G × E interaction for agronomic traits in a worldwide collection of safflowers ( Carthamus tinctorius L.).
Autorzy:
Zhao H; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Savin KW; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Li Y; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Breen EJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Maharjan P; Agriculture Victoria, Grains Innovation Park, Horsham, VIC 3400 Australia.
Tibbits JF; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Kant S; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia.; Agriculture Victoria, Grains Innovation Park, Horsham, VIC 3400 Australia.
Hayden MJ; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
Daetwyler HD; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083 Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083 Australia.
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Źródło:
Molecular breeding : new strategies in plant improvement [Mol Breed] 2022 Apr 12; Vol. 42 (4), pp. 24. Date of Electronic Publication: 2022 Apr 12 (Print Publication: 2022).
Typ publikacji:
Journal Article
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Recovery of mitogenomes from whole genome sequences to infer maternal diversity in 1883 modern taurine and indicine cattle.
Autorzy:
Dorji J; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia. .; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
Vander Jagt CJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Chamberlain AJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Cocks BG; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
MacLeod IM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
Daetwyler HD; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
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Źródło:
Scientific reports [Sci Rep] 2022 Apr 04; Vol. 12 (1), pp. 5582. Date of Electronic Publication: 2022 Apr 04.
Typ publikacji:
Journal Article
MeSH Terms:
Cattle*/genetics
Genome, Mitochondrial*
Animals ; Genetic Variation ; Genotype ; Haplotypes/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
High-throughput phenotyping to dissect genotypic differences in safflower for drought tolerance.
Autorzy:
Joshi S; Agriculture Victoria, Grains Innovation Park, Horsham, Victoria, Australia.
Thoday-Kennedy E; Agriculture Victoria, Grains Innovation Park, Horsham, Victoria, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Hayden M; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Spangenberg G; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, Victoria, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Kant S; Agriculture Victoria, Grains Innovation Park, Horsham, Victoria, Australia.; Centre for Agricultural Innovation, School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, Victoria, Australia.
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Źródło:
PloS one [PLoS One] 2021 Jul 23; Vol. 16 (7), pp. e0254908. Date of Electronic Publication: 2021 Jul 23 (Print Publication: 2021).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Droughts*
Genotype*
Stress, Physiological*
Carthamus tinctorius/*genetics
Phenomics/*methods
Plant Breeding/*methods
Automation, Laboratory/methods ; Biomass ; Carthamus tinctorius/physiology ; Phenotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Investigating the Effect of Imputed Structural Variants from Whole-Genome Sequence on Genome-Wide Association and Genomic Prediction in Dairy Cattle.
Autorzy:
Chen L; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.
Pryce JE; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.
Hayes BJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083, Australia.; Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, The University of Queensland, St. Lucia, QLD 4067, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC 3083, Australia.
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Źródło:
Animals : an open access journal from MDPI [Animals (Basel)] 2021 Feb 19; Vol. 11 (2). Date of Electronic Publication: 2021 Feb 19.
Typ publikacji:
Journal Article
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle.
Autorzy:
Dorji J; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia. .; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
Vander Jagt CJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Garner JB; Agriculture Victoria, Ellinbank Dairy Centre, Ellinbank, VIC, 3822, Australia.
Marett LC; Agriculture Victoria, Ellinbank Dairy Centre, Ellinbank, VIC, 3822, Australia.
Mason BA; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Reich CM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Xiang R; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; Faculty of Veterinary & Agricultural Science, University of Melbourne, Parkville, VIC, 3052, Australia.
Clark EL; The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, Scotland, UK.
Cocks BG; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Chamberlain AJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
MacLeod IM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Daetwyler HD; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
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Źródło:
BMC genomics [BMC Genomics] 2020 Oct 19; Vol. 21 (1), pp. 720. Date of Electronic Publication: 2020 Oct 19.
Typ publikacji:
Journal Article
MeSH Terms:
Genome, Mitochondrial*
Mitochondrial Proteins*
Animals ; Cattle/genetics ; Energy Metabolism/genetics ; Female ; Gene Expression ; Gene Expression Profiling ; Sheep
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Meta-analysis of GWAS in canola blackleg (Leptosphaeria maculans) disease traits demonstrates increased power from imputed whole-genome sequence.
Autorzy:
Fikere M; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.; Centre for AgriBioscience, Agriculture Victoria, AgriBio, Bundoora, VIC, 3083, Australia.; Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, Brisbane, QLD, 4072, Australia.
Barbulescu DM; Agriculture Victoria, Grains Innovation Park, Horsham, VIC, 3401, Australia.
Malmberg MM; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.; Centre for AgriBioscience, Agriculture Victoria, AgriBio, Bundoora, VIC, 3083, Australia.
Spangenberg GC; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.; Centre for AgriBioscience, Agriculture Victoria, AgriBio, Bundoora, VIC, 3083, Australia.
Cogan NOI; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.; Centre for AgriBioscience, Agriculture Victoria, AgriBio, Bundoora, VIC, 3083, Australia.
Daetwyler HD; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia. hans.daetwyler@agriculture.vic.gov.au.; Centre for AgriBioscience, Agriculture Victoria, AgriBio, Bundoora, VIC, 3083, Australia. hans.daetwyler@agriculture.vic.gov.au.
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Źródło:
Scientific reports [Sci Rep] 2020 Aug 31; Vol. 10 (1), pp. 14300. Date of Electronic Publication: 2020 Aug 31.
Typ publikacji:
Journal Article; Meta-Analysis; Research Support, Non-U.S. Gov't
MeSH Terms:
Leptosphaeria*
Whole Genome Sequencing*
Brassica napus/*genetics
Disease Resistance/*genetics
Plant Diseases/*microbiology
Brassica napus/microbiology ; Genes, Plant/genetics ; Genome, Plant/genetics ; Genome-Wide Association Study ; Quantitative Trait, Heritable
SCR Organism:
Leptosphaeria maculans
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Analyses of inter-individual variations of sperm DNA methylation and their potential implications in cattle.
Autorzy:
Liu S; College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.; USDA-ARS, Animal Genomics and Improvement Laboratory, Beltsville, MD, 20705, USA.
Fang L; USDA-ARS, Animal Genomics and Improvement Laboratory, Beltsville, MD, 20705, USA.; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.; Medical Research Council Human Genetics Unit at the Medical Research Council Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, EH4 2XU, UK.
Zhou Y; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Education Ministry of China, Huazhong Agricultural University, Wuhan, 430070, Hubei, China.
Santos DJA; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.
Xiang R; Faculty of Veterinary & Agricultural Science, The University of Melbourne, Parkville, Victoria, 3052, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBiosciences, Bundoora, Victoria, 3083, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBiosciences, Bundoora, Victoria, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, 3083, Australia.
Chamberlain AJ; Agriculture Victoria, AgriBio, Centre for AgriBiosciences, Bundoora, Victoria, 3083, Australia.
Cole JB; USDA-ARS, Animal Genomics and Improvement Laboratory, Beltsville, MD, 20705, USA.
Li CJ; USDA-ARS, Animal Genomics and Improvement Laboratory, Beltsville, MD, 20705, USA.
Yu Y; College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.
Ma L; Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.
Zhang S; College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China. .
Liu GE; USDA-ARS, Animal Genomics and Improvement Laboratory, Beltsville, MD, 20705, USA. .
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Źródło:
BMC genomics [BMC Genomics] 2019 Nov 21; Vol. 20 (1), pp. 888. Date of Electronic Publication: 2019 Nov 21.
Typ publikacji:
Journal Article
MeSH Terms:
DNA Methylation*
Cattle/*genetics
Reproduction/*genetics
Spermatozoa/*metabolism
Animals ; Biological Variation, Population ; Cattle/metabolism ; Genetic Variation ; Haplotypes ; Male ; Quantitative Trait Loci
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation.
Autorzy:
Yurchenko AA; The Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.; Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, G12 8QQ, UK.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, 3083, Victoria, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, 3083, Victoria, Australia.
Yudin N; The Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.
Schnabel RD; Division of Animal Sciences, University of Missouri, Columbia, MO, 65211-5300, USA.
Vander Jagt CJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, 3083, Victoria, Australia.
Soloshenko V; Siberian Research Institute of Animal Husbandry, 630501, Krasnoobsk, Russia.
Lhasaranov B; Shuluuma IAPC, Kizhinga, 671450, Buryatia, Russia.
Popov R; Yakutian Research Institute of Agriculture, 677001, Yakutsk, Russia.
Taylor JF; Division of Animal Sciences, University of Missouri, Columbia, MO, 65211-5300, USA.
Larkin DM; The Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia. .; Royal Veterinary College, University of London, NW01 0TU, London, UK. .
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Źródło:
Scientific reports [Sci Rep] 2018 Aug 28; Vol. 8 (1), pp. 12984. Date of Electronic Publication: 2018 Aug 28.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome*
Quantitative Trait, Heritable*
Selective Breeding*
Cattle/*genetics
Acclimatization ; Animals ; Female ; Male ; Russia
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues.
Autorzy:
Xiang R; Faculty of Veterinary & Agricultural Science, University of Melbourne, Parkville, VIC, 3010, Australia. .; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia. .
Hayes BJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, University of Queensland, St. Lucia, QLD, 4067, Australia.
Vander Jagt CJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
MacLeod IM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Khansefid M; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Bowman PJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
Yuan Z; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Prowse-Wilkins CP; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Reich CM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Mason BA; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Garner JB; Agriculture Victoria, Dairy Production Science, Ellinbank, VIC, 3821, Australia.
Marett LC; Agriculture Victoria, Dairy Production Science, Ellinbank, VIC, 3821, Australia.
Chen Y; Elizabeth Macarthur Agricultural Institute, New South Wales Department of Primary Industries, Camden, NSW, 2570, Australia.
Bolormaa S; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
Chamberlain AJ; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
Goddard ME; Faculty of Veterinary & Agricultural Science, University of Melbourne, Parkville, VIC, 3010, Australia.; Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, 3083, Australia.
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Źródło:
BMC genomics [BMC Genomics] 2018 Jul 04; Vol. 19 (1), pp. 521. Date of Electronic Publication: 2018 Jul 04.
Typ publikacji:
Journal Article
MeSH Terms:
Genetic Variation*
RNA Splicing*
Animals ; Blood Cells/metabolism ; Caseins/genetics ; Cattle ; Exons ; Female ; Liver/metabolism ; Mammary Glands, Animal/metabolism ; Muscles/metabolism ; Polymorphism, Single Nucleotide ; Quantitative Trait Loci ; Transcriptome
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Genotyping-by-sequencing through transcriptomics: implementation in a range of crop species with varying reproductive habits and ploidy levels.
Autorzy:
Malmberg MM; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria 3086, Australia.
Pembleton LW; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Baillie RC; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Drayton MC; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Sudheesh S; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Kaur S; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Shinozuka H; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Verma P; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.
Spangenberg GC; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria 3086, Australia.
Daetwyler HD; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria 3086, Australia.
Forster JW; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria 3086, Australia.
Cogan NOI; Agriculture Victoria, AgriBio, Centre for AgriBioscience, 5 Ring Road, Bundoora, Victoria 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria 3086, Australia.
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Źródło:
Plant biotechnology journal [Plant Biotechnol J] 2018 Apr; Vol. 16 (4), pp. 877-889. Date of Electronic Publication: 2017 Oct 13.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Ploidies*
Polymorphism, Single Nucleotide*
Crops, Agricultural/*genetics
Genotyping Techniques/*methods
Brassica rapa/genetics ; Gene Expression Profiling ; Genome, Plant ; Lolium/genetics ; Phalaris/genetics ; Reproducibility of Results
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Meta-analysis of sequence-based association studies across three cattle breeds reveals 25 QTL for fat and protein percentages in milk at nucleotide resolution.
Autorzy:
Pausch H; Animal Genomics, Institute of Agricultural Sciences, ETH Zurich, 8092, Zurich, Switzerland. .; Agriculture Research Division, Agriculture Victoria, Department of Economic Development, Jobs, Transport and Resources, AgriBio, VIC, 3083, Australia. .
Emmerling R; Institute of Animal Breeding, Bavarian State Research Center for Agriculture, 85586, Grub, Germany.
Gredler-Grandl B; QualitasAG, 6300, Zug, Switzerland.
Fries R; Animal Breeding, Technische Universitaet Muenchen, 85354, Freising, Germany.
Daetwyler HD; Agriculture Research Division, Agriculture Victoria, Department of Economic Development, Jobs, Transport and Resources, AgriBio, VIC, 3083, Australia.; School of Applied Systems Biology, LaTrobe University, Bundoora, VIC, 3083, Australia.
Goddard ME; Agriculture Research Division, Agriculture Victoria, Department of Economic Development, Jobs, Transport and Resources, AgriBio, VIC, 3083, Australia.; Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Melbourne, VIC, 3010, Australia.
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Źródło:
BMC genomics [BMC Genomics] 2017 Nov 09; Vol. 18 (1), pp. 853. Date of Electronic Publication: 2017 Nov 09.
Typ publikacji:
Journal Article; Meta-Analysis
MeSH Terms:
Adipose Tissue/*cytology
Milk/*metabolism
Milk Proteins/*metabolism
Nucleotides/*genetics
Quantitative Trait Loci/*genetics
Animals ; Base Sequence ; Cattle ; Genotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Genomic prediction of reproduction traits for Merino sheep.
Autorzy:
Bolormaa S; AgriBio, Centre for AgriBioscience, Biosciences Research, Agriculture Victoria, Bundoora, Vic, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.
Brown DJ; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; Animal Genetics and Breeding Unit (AGBU), University of New England, Armidale, NSW, 2351, Australia.
Swan AA; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; Animal Genetics and Breeding Unit (AGBU), University of New England, Armidale, NSW, 2351, Australia.
van der Werf JHJ; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia.
Hayes BJ; AgriBio, Centre for AgriBioscience, Biosciences Research, Agriculture Victoria, Bundoora, Vic, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Vic., 3086, Australia.
Daetwyler HD; AgriBio, Centre for AgriBioscience, Biosciences Research, Agriculture Victoria, Bundoora, Vic, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Vic., 3086, Australia.
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Źródło:
Animal genetics [Anim Genet] 2017 Jun; Vol. 48 (3), pp. 338-348. Date of Electronic Publication: 2017 Feb 17.
Typ publikacji:
Journal Article
MeSH Terms:
Breeding*
Genomics/*methods
Reproduction/*genetics
Sheep, Domestic/*genetics
Animals ; Female ; Genome ; Genotype ; Litter Size ; Male ; Models, Genetic ; Phenotype ; Polymorphism, Single Nucleotide ; Weaning
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Detailed phenotyping identifies genes with pleiotropic effects on body composition.
Autorzy:
Bolormaa S; AgriBio, Centre for AgriBioscience, Department of Economic Development, Jobs, Transport and Resources, Bundoora, VIC, 3083, Australia. .; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia. .
Hayes BJ; AgriBio, Centre for AgriBioscience, Department of Economic Development, Jobs, Transport and Resources, Bundoora, VIC, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
van der Werf JH; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia.
Pethick D; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, 6150, Australia.
Goddard ME; AgriBio, Centre for AgriBioscience, Department of Economic Development, Jobs, Transport and Resources, Bundoora, VIC, 3083, Australia.; School of Land and Environment, University of Melbourne, Parkville, VIC, 3010, Australia.
Daetwyler HD; AgriBio, Centre for AgriBioscience, Department of Economic Development, Jobs, Transport and Resources, Bundoora, VIC, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia.
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Źródło:
BMC genomics [BMC Genomics] 2016 Mar 12; Vol. 17, pp. 224. Date of Electronic Publication: 2016 Mar 12.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Phenotype*
Body Composition/*genetics
Sheep/*genetics
Animals ; Cattle ; Cluster Analysis ; Fatty Acids/chemistry ; Genetic Association Studies ; Genetic Pleiotropy ; Genotype ; Humans ; Meat ; Models, Genetic ; Muscle, Skeletal/chemistry ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Rare Variants in Transcript and Potential Regulatory Regions Explain a Small Percentage of the Missing Heritability of Complex Traits in Cattle.
Autorzy:
Gonzalez-Recio O; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.
Daetwyler HD; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, 3086, Australia.
MacLeod IM; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.; Faculty of Veterinary and Agricultural Science, University of Melbourne, Parkville, Victoria, 3010, Australia.
Pryce JE; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, 3086, Australia.
Bowman PJ; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.
Hayes BJ; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Dairy Futures Cooperative Research Centre, Bundoora, Victoria, 3083, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, 3086, Australia.
Goddard ME; Biosciences Research Division, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, 3083, Australia.; Faculty of Veterinary and Agricultural Science, University of Melbourne, Parkville, Victoria, 3010, Australia.
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Źródło:
PloS one [PLoS One] 2015 Dec 07; Vol. 10 (12), pp. e0143945. Date of Electronic Publication: 2015 Dec 07 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Mutation*
Regulatory Sequences, Nucleic Acid*
Cattle/*genetics
RNA, Messenger/*genetics
Animals ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Design of a low-density SNP chip for the main Australian sheep breeds and its effect on imputation and genomic prediction accuracy.
Autorzy:
Bolormaa S; AgriBio, Centre for AgriBioscience, DEDJTR, Bundoora, VIC, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.
Gore K; School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia.
van der Werf JH; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia.
Hayes BJ; AgriBio, Centre for AgriBioscience, DEDJTR, Bundoora, VIC, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.
Daetwyler HD; AgriBio, Centre for AgriBioscience, DEDJTR, Bundoora, VIC, 3083, Australia.; Cooperative Research Centre for Sheep Industry Innovation, Armidale, NSW, 2351, Australia.; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3086, Australia.
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Źródło:
Animal genetics [Anim Genet] 2015 Oct; Vol. 46 (5), pp. 544-56. Date of Electronic Publication: 2015 Sep 11.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Breeding*
Polymorphism, Single Nucleotide*
Oligonucleotide Array Sequence Analysis/*veterinary
Sheep, Domestic/*genetics
Animals ; Australia ; Gene Frequency ; Genomics ; Genotype ; Meat ; Phenotype ; Sheep, Domestic/classification
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
How old are quantitative trait loci and how widely do they segregate?
Autorzy:
Kemper KE; Faculty of Veterinary and Agricultural Sciences, University of Melbourne, Parkville, Vic., Australia.
Hayes BJ
Daetwyler HD
Goddard ME
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Źródło:
Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie [J Anim Breed Genet] 2015 Apr; Vol. 132 (2), pp. 121-34.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Polymorphism, Single Nucleotide*
Quantitative Trait Loci*
Cattle/*genetics
Animals ; Cattle/physiology ; Female ; Genome-Wide Association Study ; Male ; Milk/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Assessment of genetic variation within a global collection of lentil (Lens culinaris Medik.) cultivars and landraces using SNP markers.
Autorzy:
Lombardi M; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. .
Materne M; Department of Environment and Primary Industries, Biosciences Research Division, Grains Innovation Park, Horsham, 3401, Victoria, Australia. .
Cogan NO; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. .
Rodda M; Department of Environment and Primary Industries, Biosciences Research Division, Grains Innovation Park, Horsham, 3401, Victoria, Australia. .
Daetwyler HD; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. hans.daetwyler@depi.vic.gov.au.
Slater AT; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. .
Forster JW; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. .; La Trobe University, Bundoora, Melbourne, 3086, Victoria, Australia. .
Kaur S; Department of Environment and Primary Industries, Biosciences Research Division, AgriBio, Centre for AgriBioscience, La Trobe University, 5 Ring Road, Bundoora, Melbourne, 3083, Victoria, Australia. .
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Źródło:
BMC genetics [BMC Genet] 2014 Dec 24; Vol. 15, pp. 150. Date of Electronic Publication: 2014 Dec 24.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genes, Plant*
Polymorphism, Single Nucleotide*
Lens Plant/*genetics
Cluster Analysis ; Genetic Markers ; Phylogeny
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Wyświetlanie 1-20 z 24

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