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Tytuł:
Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements.
Autorzy:
Wirthlin ME; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Schmid TA; Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94708, USA.
Elie JE; Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94708, USA.; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94708, USA.
Zhang X; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Kowalczyk A; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Redlich R; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Shvareva VA; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94708, USA.
Rakuljic A; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94708, USA.
Ji MB; Department of Psychology, University of California, Berkeley, Berkeley, CA 94708, USA.
Bhat NS; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94708, USA.
Kaplow IM; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Department of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.
Schäffer DE; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lawler AJ; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Wang AZ; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Phan BN; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Annaldasula S; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Brown AR; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lu T; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lim BK; Neurobiology section, Division of Biological Science, University of California, San Diego, La Jolla, CA 92093, USA.
Azim E; Molecular Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.
Clark NL; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Meyer WK; Department of Biological Sciences, Lehigh University, Bethlehem, PA 18015, USA.
Pond SLK; Department of Biology, Temple University, Philadelphia, PA 19122, USA.
Chikina M; Department of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.
Yartsev MM; Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94708, USA.; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94708, USA.
Pfenning AR; Department of Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Andrews G
Armstrong JC
Bianchi M
Birren BW
Bredemeyer KR
Breit AM
Christmas MJ
Clawson H
Damas J
Di Palma F
Diekhans M
Dong MX
Eizirik E
Fan K
Fanter C
Foley NM
Forsberg-Nilsson K
Garcia CJ
Gatesy J
Gazal S
Genereux DP
Goodman L
Grimshaw J
Halsey MK
Harris AJ
Hickey G
Hiller M
Hindle AG
Hubley RM
Hughes GM
Johnson J
Juan D
Kaplow IM
Karlsson EK
Keough KC
Kirilenko B
Koepfli KP
Korstian JM
Kowalczyk A
Kozyrev SV
Lawler AJ
Lawless C
Lehmann T
Levesque DL
Lewin HA
Li X
Lind A
Lindblad-Toh K
Mackay-Smith A
Marinescu VD
Marques-Bonet T
Mason VC
Meadows JRS
Meyer WK
Moore JE
Moreira LR
Moreno-Santillan DD
Morrill KM
Muntané G
Murphy WJ
Navarro A
Nweeia M
Ortmann S
Osmanski A
Paten B
Paulat NS
Pfenning AR
Phan BN
Pollard KS
Pratt HE
Ray DA
Reilly SK
Rosen JR
Ruf I
Ryan L
Ryder OA
Sabeti PC
Schäffer DE
Serres A
Shapiro B
Smit AFA
Springer M
Srinivasan C
Steiner C
Storer JM
Sullivan KAM
Sullivan PF
Sundström E
Supple MA
Swofford R
Talbot JE
Teeling E
Turner-Maier J
Valenzuela A
Wagner F
Wallerman O
Wang C
Wang J
Weng Z
Wilder AP
Wirthlin ME
Xue JR
Zhang X
Pokaż więcej
Corporate Authors:
Zoonomia Consortium
Źródło:
Science (New York, N.Y.) [Science] 2024 Mar 29; Vol. 383 (6690), pp. eabn3263. Date of Electronic Publication: 2024 Mar 29.
Typ publikacji:
Journal Article
MeSH Terms:
Vocalization, Animal*/physiology
Motor Cortex*/cytology
Motor Cortex*/physiology
Enhancer Elements, Genetic*
Motor Neurons*/physiology
Gene Expression Regulation*
Evolution, Molecular*
Proteins*/genetics
Proteins*/metabolism
Eutheria*/genetics
Eutheria*/physiology
Animals ; Chiroptera/genetics ; Chiroptera/physiology ; Chromatin/metabolism ; Larynx/physiology ; Epigenesis, Genetic ; Genome ; Amino Acid Sequence ; Machine Learning
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The complete sequence of a human Y chromosome
Autorzy:
Rhie, Arang
Nurk, SergeyAff1, Aff51
Cechova, MonikaAff2, Aff3
Hoyt, Savannah J.
Taylor, Dylan J.
Altemose, Nicolas
Hook, Paul W.
Koren, Sergey
Rautiainen, Mikko
Alexandrov, Ivan A.Aff8, Aff9, Aff52
Allen, Jamie
Asri, Mobin
Bzikadze, Andrey V.
Chen, Nae-Chyun
Chin, Chen-ShanAff14, Aff15
Diekhans, Mark
Flicek, PaulAff10, Aff16
Formenti, Giulio
Fungtammasan, Arkarachai
Garcia Giron, Carlos
Garrison, Erik
Gershman, Ariel
Gerton, Jennifer L.Aff20, Aff21
Grady, Patrick G. S.
Guarracino, AndreaAff19, Aff22
Haggerty, Leanne
Halabian, Reza
Hansen, Nancy F.Aff1, Aff24
Harris, Robert
Hartley, Gabrielle A.
Harvey, William T.
Haukness, Marina
Heinz, Jakob
Hourlier, Thibaut
Hubley, Robert M.
Hunt, Sarah E.
Hwang, Stephen
Jain, Miten
Kesharwani, Rupesh K.
Lewis, Alexandra P.
Li, HengAff31, Aff32
Logsdon, Glennis A.
Lucas, Julian K.Aff3, Aff11
Makalowski, Wojciech
Markovic, Christopher
Martin, Fergal J.
Mc Cartney, Ann M.
McCoy, Rajiv C.
McDaniel, Jennifer
McNulty, Brandy M.Aff3, Aff11
Medvedev, PaulAff35, Aff36, Aff37
Mikheenko, AllaAff9, Aff38
Munson, Katherine M.
Murphy, Terence D.
Olsen, Hugh E.Aff3, Aff11
Olson, Nathan D.
Paulin, Luis F.
Porubsky, David
Potapova, Tamara
Ryabov, Fedor
Salzberg, Steven L.
Sauria, Michael E. G.
Sedlazeck, Fritz J.Aff30, Aff42
Shafin, Kishwar
Shepelev, Valery A.
Shumate, Alaina
Storer, Jessica M.
Surapaneni, Likhitha
Taravella Oill, Angela M.
Thibaud-Nissen, Françoise
Timp, Winston
Tomaszkiewicz, MartaAff25, Aff46
Vollger, Mitchell R.
Walenz, Brian P.
Watwood, Allison C.
Weissensteiner, Matthias H.
Wenger, Aaron M.
Wilson, Melissa A.
Zarate, Samantha
Zhu, Yiming
Zook, Justin M.
Eichler, Evan E.Aff26, Aff48
O’Neill, Rachel J.Aff4, Aff49, Aff50
Schatz, Michael C.Aff5, Aff13
Miga, Karen H.Aff3, Aff11
Makova, Kateryna D.
Phillippy, Adam M.Aff1, IDs4158602306457y_cor87
Pokaż więcej
Źródło:
Nature: International weekly journal of science. 621(7978):344-354
Czasopismo naukowe
Szczegóły
Tytuł:
Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome
Autorzy:
Liao, Wen-Wei
Asri, Mobin
Ebler, Jana
Doerr, Daniel
Haukness, Marina
Hickey, Glenn
Lu, Shuangjia
Lucas, Julian K.
Monlong, Jean
Abel, Haley J.
Buonaiuto, Silvia
Chang, Xian H.
Cheng, Haoyu
Chu, Justin
Colonna, Vincenza
Eizenga, Jordan M.
Feng, Xiaowen
Fischer, Christian
Fulton, Robert S.
Garg, Shilpa
Groza, Cristian
Guarracino, Andrea
Harvey, William T.
Heumos, Simon
Howe, Kerstin
Jain, Miten
Lu, Tsung-Yu
Markello, Charles
Martin, Fergal J.
Mitchell, Matthew W.
Munson, Katherine M.
Mwaniki, Moses Njagi
Novak, Adam M.
Olsen, Hugh E.
Pesout, Trevor
Porubsky, David
Prins, Pjotr
Sibbesen, Jonas A.
Tomlinson, Chad
Villani, Flavia
Vollger, Mitchell R.
Antonacci-Fulton, Lucinda L.
Baid, Gunjan
Baker, Carl A.
Belyaeva, Anastasiya
Billis, Konstantinos
Carroll, Andrew
Chang, Pi-Chuan
Cody, Sarah
Cook, Daniel E.
Cornejo, Omar E.
Diekhans, Mark
Ebert, Peter
Fairley, Susan
Fedrigo, Olivier
Felsenfeld, Adam L.
Formenti, Giulio
Frankish, Adam
Gao, Yan
Giron, Carlos Garcia
Green, Richard E.
Haggerty, Leanne
Hoekzema, Kendra
Hourlier, Thibaut
Ji, Hanlee P.
Kolesnikov, Alexey
Korbel, Jan O.
Kordosky, Jennifer
Lee, HoJoon
Lewis, Alexandra P.
Magalhães, Hugo
Marco-Sola, Santiago
Marijon, Pierre
McDaniel, Jennifer
Mountcastle, Jacquelyn
Nattestad, Maria
Olson, Nathan D.
Puiu, Daniela
Regier, Allison A.
Rhie, Arang
Sacco, Samuel
Sanders, Ashley D.
Schneider, Valerie A.
Schultz, Baergen I.
Shafin, Kishwar
Sirén, Jouni
Smith, Michael W.
Sofia, Heidi J.
Abou Tayoun, Ahmad N.
Thibaud-Nissen, Françoise
Tricomi, Francesca Floriana
Wagner, Justin
Wood, Jonathan M.D.
Zimin, Aleksey V.
Popejoy, Alice B.
Bourque, Guillaume
Chaisson, Mark J.P.
Flicek, Paul
Phillippy, Adam M.
Zook, Justin M.
Eichler, Evan E.
Haussler, David
Jarvis, Erich D.
Miga, Karen H.
Wang, Ting
Garrison, Erik
Marschall, Tobias
Hall, Ira
Li, Heng
Paten, Benedict
Greer, Stephanie U.
Pavlichin, Dmitri S.
Zhou, Bo
Urban, Alexander E.
Weissman, Tsachy
Pokaż więcej
Źródło:
In Cell Reports Methods 28 August 2023 3(8)
Czasopismo naukowe
Szczegóły
Tytuł:
A draft human pangenome reference
Autorzy:
Liao, Wen-WeiAff1, Aff2, Aff3
Asri, Mobin
Ebler, JanaAff5, Aff6
Doerr, DanielAff5, Aff6
Haukness, Marina
Hickey, Glenn
Lu, ShuangjiaAff1, Aff2
Lucas, Julian K.
Monlong, Jean
Abel, Haley J.
Buonaiuto, Silvia
Chang, Xian H.
Cheng, HaoyuAff9, Aff10
Chu, Justin
Colonna, VincenzaAff8, Aff11
Eizenga, Jordan M.
Feng, XiaowenAff9, Aff10
Fischer, Christian
Fulton, Robert S.Aff12, Aff13
Garg, Shilpa
Groza, Cristian
Guarracino, AndreaAff11, Aff16
Harvey, William T.
Heumos, SimonAff18, Aff19
Howe, Kerstin
Jain, Miten
Lu, Tsung-Yu
Markello, Charles
Martin, Fergal J.
Mitchell, Matthew W.
Munson, Katherine M.
Mwaniki, Moses Njagi
Novak, Adam M.
Olsen, Hugh E.
Pesout, Trevor
Porubsky, David
Prins, Pjotr
Sibbesen, Jonas A.
Sirén, Jouni
Tomlinson, Chad
Villani, Flavia
Vollger, Mitchell R.Aff17, Aff27
Antonacci-Fulton, Lucinda L.
Baid, Gunjan
Baker, Carl A.
Belyaeva, Anastasiya
Billis, Konstantinos
Carroll, Andrew
Chang, Pi-Chuan
Cody, Sarah
Cook, Daniel E.
Cook-Deegan, Robert M.
Cornejo, Omar E.
Diekhans, Mark
Ebert, PeterAff5, Aff6, Aff31
Fairley, Susan
Fedrigo, Olivier
Felsenfeld, Adam L.
Formenti, Giulio
Frankish, Adam
Gao, Yan
Garrison, Nanibaa’ A.Aff35, Aff36, Aff37
Giron, Carlos Garcia
Green, Richard E.Aff38, Aff39
Haggerty, Leanne
Hoekzema, Kendra
Hourlier, Thibaut
Ji, Hanlee P.
Kenny, Eimear E.
Koenig, Barbara A.
Kolesnikov, Alexey
Korbel, Jan O.Aff23, Aff43
Kordosky, Jennifer
Koren, Sergey
Lee, HoJoon
Lewis, Alexandra P.
Magalhães, HugoAff5, Aff6
Marco-Sola, SantiagoAff45, Aff46
Marijon, PierreAff5, Aff6
McCartney, Ann
McDaniel, Jennifer
Mountcastle, Jacquelyn
Nattestad, Maria
Nurk, Sergey
Olson, Nathan D.
Popejoy, Alice B.
Puiu, Daniela
Rautiainen, Mikko
Regier, Allison A.
Rhie, Arang
Sacco, Samuel
Sanders, Ashley D.
Schneider, Valerie A.
Schultz, Baergen I.
Shafin, Kishwar
Smith, Michael W.
Sofia, Heidi J.
Abou Tayoun, Ahmad N.Aff52, Aff53
Thibaud-Nissen, Françoise
Tricomi, Francesca Floriana
Wagner, Justin
Walenz, Brian
Wood, Jonathan M. D.
Zimin, Aleksey V.Aff49, Aff54
Bourque, GuillaumeAff55, Aff56, Aff57
Chaisson, Mark J. P.
Flicek, Paul
Phillippy, Adam M.
Zook, Justin M.
Eichler, Evan E.Aff17, Aff58
Haussler, DavidAff4, Aff58
Wang, TingAff12, Aff13
Jarvis, Erich D.Aff32, Aff58, Aff59
Miga, Karen H.
Garrison, ErikAff11, IDs4158602305896x_cor115
Marschall, TobiasAff5, Aff6, IDs4158602305896x_cor116
Hall, Ira M.Aff1, Aff2, IDs4158602305896x_cor117
Li, HengAff9, Aff10, IDs4158602305896x_cor118
Paten, BenedictAff4, IDs4158602305896x_cor119
Pokaż więcej
Źródło:
Nature: International weekly journal of science. 617(7960):312-324
Czasopismo naukowe
Szczegóły
Tytuł:
Evolutionary constraint and innovation across hundreds of placental mammals.
Autorzy:
Christmas MJ; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Kaplow IM; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Genereux DP; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Dong MX; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Hughes GM; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Li X; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Morningside Graduate School of Biomedical Sciences, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Sullivan PF; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Hindle AG; School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV 89154, USA.
Andrews G; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Armstrong JC; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Bianchi M; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Breit AM; School of Biology and Ecology, University of Maine, Orono, ME 04469, USA.
Diekhans M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Fanter C; School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV 89154, USA.
Foley NM; Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA.
Goodman DB; Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Goodman L; Fauna Bio, Inc., Emeryville, CA 94608, USA.
Keough KC; Fauna Bio, Inc., Emeryville, CA 94608, USA.; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.
Kirilenko B; Faculty of Biosciences, Goethe-University, 60438 Frankfurt, Germany.; LOEWE Centre for Translational Biodiversity Genomics, 60325 Frankfurt, Germany.; Senckenberg Research Institute, 60325 Frankfurt, Germany.
Kowalczyk A; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lawless C; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Lind AL; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.
Meadows JRS; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Moreira LR; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Redlich RW; Department of Biological Sciences, Mellon College of Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Ryan L; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Swofford R; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Valenzuela A; Department of Experimental and Health Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.
Wagner F; Museum of Zoology, Senckenberg Natural History Collections Dresden, 01109 Dresden, Germany.
Wallerman O; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Brown AR; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Damas J; The Genome Center, University of California Davis, Davis, CA 95616, USA.
Fan K; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Gatesy J; Division of Vertebrate Zoology, American Museum of Natural History, New York, NY 10024, USA.
Grimshaw J; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Johnson J; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Kozyrev SV; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Lawler AJ; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Biological Sciences, Mellon College of Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Marinescu VD; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Morrill KM; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Morningside Graduate School of Biomedical Sciences, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Osmanski A; Medical Scientist Training Program, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Paulat NS; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Phan BN; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Medical Scientist Training Program, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Reilly SK; Department of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
Schäffer DE; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Steiner C; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.
Supple MA; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Wilder AP; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.
Wirthlin ME; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Allen Institute for Brain Science, Seattle, WA 98109, USA.
Xue JR; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Birren BW; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Gazal S; Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Hubley RM; Institute for Systems Biology, Seattle, WA 98109, USA.
Koepfli KP; Center for Species Survival, Smithsonian's National Zoo and Conservation Biology Institute, Washington, DC 20008, USA.; Computer Technologies Laboratory, ITMO University, St. Petersburg 197101, Russia.; Smithsonian-Mason School of Conservation, George Mason University, Front Royal, VA 22630, USA.
Marques-Bonet T; Catalan Institution of Research and Advanced Studies (ICREA), 08010 Barcelona, Spain.; CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08036 Barcelona, Spain.; Department of Medicine and Life Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.; Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Barcelona, Spain.
Meyer WK; Department of Biological Sciences, Lehigh University, Bethlehem, PA 18015, USA.
Nweeia M; Department of Comprehensive Care, School of Dental Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.; Department of Vertebrate Zoology, Canadian Museum of Nature, Ottawa, Ontario K2P 2R1, Canada.; Department of Vertebrate Zoology, Smithsonian Institution, Washington, DC 20002, USA.; Narwhal Genome Initiative, Department of Restorative Dentistry and Biomaterials Sciences, Harvard School of Dental Medicine, Boston, MA 02115, USA.
Sabeti PC; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Howard Hughes Medical Institute, Harvard University, Cambridge, MA 02138, USA.
Shapiro B; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA.; Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Smit AFA; Institute for Systems Biology, Seattle, WA 98109, USA.
Springer MS; Department of Evolution, Ecology and Organismal Biology, University of California Riverside, Riverside, CA 92521, USA.
Teeling EC; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Weng Z; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Hiller M; Faculty of Biosciences, Goethe-University, 60438 Frankfurt, Germany.; LOEWE Centre for Translational Biodiversity Genomics, 60325 Frankfurt, Germany.; Senckenberg Research Institute, 60325 Frankfurt, Germany.
Levesque DL; School of Biology and Ecology, University of Maine, Orono, ME 04469, USA.
Lewin HA; The Genome Center, University of California Davis, Davis, CA 95616, USA.; Department of Evolution and Ecology, University of California Davis, Davis, CA 95616, USA.; John Muir Institute for the Environment, University of California Davis, Davis, CA 95616, USA.
Murphy WJ; Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA.
Navarro A; Catalan Institution of Research and Advanced Studies (ICREA), 08010 Barcelona, Spain.; Department of Medicine and Life Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.; BarcelonaBeta Brain Research Center, Pasqual Maragall Foundation, 08005 Barcelona, Spain.; CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08003 Barcelona, Spain.
Paten B; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Pollard KS; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Ray DA; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Ruf I; Division of Messel Research and Mammalogy, Senckenberg Research Institute and Natural History Museum Frankfurt, 60325 Frankfurt am Main, Germany.
Ryder OA; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.; Department of Evolution, Behavior and Ecology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92039, USA.
Pfenning AR; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lindblad-Toh K; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Karlsson EK; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Molecular Medicine, UMass Chan Medical School, Worcester, MA 01605, USA.
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Corporate Authors:
Zoonomia Consortium§
Źródło:
Science (New York, N.Y.) [Science] 2023 Apr 28; Vol. 380 (6643), pp. eabn3943. Date of Electronic Publication: 2023 Apr 28.
Typ publikacji:
Journal Article
MeSH Terms:
Eutheria*/genetics
Evolution, Molecular*
Animals ; Female ; Humans ; Conserved Sequence/genetics ; Genome, Human
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The complete sequence of a human genome.
Autorzy:
Nurk S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Rhie A; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Rautiainen M; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Bzikadze AV; Graduate Program in Bioinformatics and Systems Biology, University of California, San Diego, La Jolla, CA, USA.
Mikheenko A; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.
Vollger MR; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Altemose N; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA.
Uralsky L; Sirius University of Science and Technology, Sochi, Russia.; Vavilov Institute of General Genetics, Moscow, Russia.
Gershman A; Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, MD, USA.
Aganezov S; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Hoyt SJ; Institute for Systems Genomics and Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Diekhans M; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.
Logsdon GA; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Alonge M; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Antonarakis SE; University of Geneva Medical School, Geneva, Switzerland.
Borchers M; Stowers Institute for Medical Research, Kansas City, MO, USA.
Bouffard GG; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Brooks SY; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Caldas GV; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Chen NC; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Cheng H; Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, USA.; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Chin CS; DNAnexus, Mountain View, CA, USA.
Chow W; Wellcome Sanger Institute, Cambridge, UK.
de Lima LG; Stowers Institute for Medical Research, Kansas City, MO, USA.
Dishuck PC; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Durbin R; Wellcome Sanger Institute, Cambridge, UK.; Department of Genetics, University of Cambridge, Cambridge, UK.
Dvorkina T; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.
Fiddes IT; Inscripta, Boulder, CO, USA.
Formenti G; Laboratory of Neurogenetics of Language and The Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA.; Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Fulton RS; Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA.
Fungtammasan A; DNAnexus, Mountain View, CA, USA.
Garrison E; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.; University of Tennessee Health Science Center, Memphis, TN, USA.
Grady PGS; Institute for Systems Genomics and Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Graves-Lindsay TA; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO, USA.
Hall IM; Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.
Hansen NF; Comparative Genomics Analysis Unit, Cancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Hartley GA; Institute for Systems Genomics and Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Haukness M; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.
Howe K; Wellcome Sanger Institute, Cambridge, UK.
Hunkapiller MW; Pacific Biosciences, Menlo Park, CA, USA.
Jain C; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.; Department of Computational and Data Sciences, Indian Institute of Science, Bangalore KA, India.
Jain M; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.
Jarvis ED; Laboratory of Neurogenetics of Language and The Vertebrate Genome Lab, The Rockefeller University, New York, NY, USA.; Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Kerpedjiev P; Reservoir Genomics LLC, Oakland, CA, USA.
Kirsche M; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Kolmogorov M; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.
Korlach J; Pacific Biosciences, Menlo Park, CA, USA.
Kremitzki M; McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO, USA.
Li H; Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, USA.; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Maduro VV; Undiagnosed Diseases Program, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Marschall T; Heinrich Heine University Düsseldorf, Medical Faculty, Institute for Medical Biometry and Bioinformatics, Düsseldorf, Germany.
McCartney AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
McDaniel J; Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD, USA.
Miller DE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Department of Pediatrics, Division of Genetic Medicine, University of Washington and Seattle Children's Hospital, Seattle, WA, USA.
Mullikin JC; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.; Comparative Genomics Analysis Unit, Cancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Myers EW; Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Olson ND; Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD, USA.
Paten B; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.
Peluso P; Pacific Biosciences, Menlo Park, CA, USA.
Pevzner PA; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.
Porubsky D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Potapova T; Stowers Institute for Medical Research, Kansas City, MO, USA.
Rogaev EI; Sirius University of Science and Technology, Sochi, Russia.; Vavilov Institute of General Genetics, Moscow, Russia.; Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA.; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
Rosenfeld JA; Cancer Institute of New Jersey, New Brunswick, NJ, USA.
Salzberg SL; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Schneider VA; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Sedlazeck FJ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.
Shafin K; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.
Shew CJ; Genome Center, MIND Institute, Department of Biochemistry and Molecular Medicine, University of California, Davis, CA, USA.
Shumate A; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Sims Y; Wellcome Sanger Institute, Cambridge, UK.
Smit AFA; Institute for Systems Biology, Seattle, WA, USA.
Soto DC; Genome Center, MIND Institute, Department of Biochemistry and Molecular Medicine, University of California, Davis, CA, USA.
Sović I; Pacific Biosciences, Menlo Park, CA, USA.; Digital BioLogic d.o.o., Ivanić-Grad, Croatia.
Storer JM; Institute for Systems Biology, Seattle, WA, USA.
Streets A; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; Chan Zuckerberg Biohub, San Francisco, CA, USA.
Sullivan BA; Department of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, NC, USA.
Thibaud-Nissen F; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Torrance J; Wellcome Sanger Institute, Cambridge, UK.
Wagner J; Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD, USA.
Walenz BP; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Wenger A; Pacific Biosciences, Menlo Park, CA, USA.
Wood JMD; Wellcome Sanger Institute, Cambridge, UK.
Xiao C; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Yan SM; Department of Biology, Johns Hopkins University, Baltimore, MD, USA.
Young AC; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Zarate S; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Surti U; Department of Pathology, University of Pittsburgh, Pittsburgh, PA, USA.
McCoy RC; Department of Biology, Johns Hopkins University, Baltimore, MD, USA.
Dennis MY; Genome Center, MIND Institute, Department of Biochemistry and Molecular Medicine, University of California, Davis, CA, USA.
Alexandrov IA; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.; Vavilov Institute of General Genetics, Moscow, Russia.; Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Gerton JL; Stowers Institute for Medical Research, Kansas City, MO, USA.; Department of Biochemistry and Molecular Biology, University of Kansas Medical School, Kansas City, MO, USA.
O'Neill RJ; Institute for Systems Genomics and Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Timp W; Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, MD, USA.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Zook JM; Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD, USA.
Schatz MC; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.; Department of Biology, Johns Hopkins University, Baltimore, MD, USA.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.
Miga KH; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.; Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, USA.
Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2022 Apr; Vol. 376 (6588), pp. 44-53. Date of Electronic Publication: 2022 Mar 31.
Typ publikacji:
Journal Article; Research Support, N.I.H., Intramural; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Genome, Human*
Human Genome Project*
Sequence Analysis, DNA/*standards
Cell Line ; Chromosomes, Artificial, Bacterial/genetics ; Chromosomes, Human/genetics ; Humans ; Reference Values
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Segmental duplications and their variation in a complete human genome.
Autorzy:
Vollger MR; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Guitart X; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Dishuck PC; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Mercuri L; Department of Biology, University of Bari, Aldo Moro, Bari 70125, Italy.
Harvey WT; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Gershman A; Department of Molecular Biology and Genetics, Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Diekhans M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Sulovari A; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Munson KM; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Lewis AP; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Hoekzema K; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Porubsky D; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Li R; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Nurk S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Miga KH; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Timp W; Department of Molecular Biology and Genetics, Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Ventura M; Department of Biology, University of Bari, Aldo Moro, Bari 70125, Italy.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2022 Apr; Vol. 376 (6588), pp. eabj6965. Date of Electronic Publication: 2022 Apr 01.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
DNA Copy Number Variations*
Gene Duplication*
Genome, Human*
Segmental Duplications, Genomic*
Evolution, Molecular ; GTPase-Activating Proteins/genetics ; Humans ; Polymorphism, Single Nucleotide ; Proto-Oncogene Proteins/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Complete genomic and epigenetic maps of human centromeres.
Autorzy:
Altemose N; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Logsdon GA; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Bzikadze AV; Graduate Program in Bioinformatics and Systems Biology, University of California San Diego, La Jolla, CA, USA.
Sidhwani P; Department of Biochemistry, Stanford University, Stanford, CA, USA.
Langley SA; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Caldas GV; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Hoyt SJ; Institute for Systems Genomics, University of Connecticut, Storrs, CT, USA.; Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Uralsky L; Sirius University of Science and Technology, Sochi, Russia.; Vavilov Institute of General Genetics, Moscow, Russia.
Ryabov FD; Moscow Polytechnic University, Moscow, Russia.
Shew CJ; Genome Center, MIND Institute, and Department of Biochemistry and Molecular Medicine, School of Medicine, University of California, Davis, Davis, CA, USA.
Sauria MEG; Department of Biology, Johns Hopkins University, Baltimore, MD, USA.
Borchers M; Stowers Institute for Medical Research, Kansas City, MO, USA.
Gershman A; Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, MD, USA.
Mikheenko A; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.
Shepelev VA; Vavilov Institute of General Genetics, Moscow, Russia.
Dvorkina T; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.
Kunyavskaya O; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.
Vollger MR; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.
Rhie A; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
McCartney AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Asri M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Lorig-Roach R; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Shafin K; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Lucas JK; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Aganezov S; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Olson D; Department of Computer Science, University of Montana, Missoula, MT. USA.
de Lima LG; Stowers Institute for Medical Research, Kansas City, MO, USA.
Potapova T; Stowers Institute for Medical Research, Kansas City, MO, USA.
Hartley GA; Institute for Systems Genomics, University of Connecticut, Storrs, CT, USA.; Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Haukness M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Kerpedjiev P; Reservoir Genomics, Oakland, CA.
Gusev F; Vavilov Institute of General Genetics, Moscow, Russia.
Tigyi K; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.
Brooks S; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Young A; NIH Intramural Sequencing Center, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Nurk S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Salama SR; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.
Paten B; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.; Department of Biomolecular Engineering, University of California Santa Cruz, CA, USA.
Rogaev EI; Sirius University of Science and Technology, Sochi, Russia.; Vavilov Institute of General Genetics, Moscow, Russia.; Department of Psychiatry, University of Massachusetts Medical School, Worcester, MA, USA.; Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
Streets A; Department of Bioengineering, University of California, Berkeley, Berkeley, CA, USA.; Chan Zuckerberg Biohub, San Francisco, CA, USA.
Karpen GH; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.; BioEngineering and BioMedical Sciences Department, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Dernburg AF; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.; Institute for Quantitative Biosciences (QB3), University of California, Berkeley, Berkeley, CA, USA.
Sullivan BA; Department of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, NC, USA.
Straight AF; Department of Biochemistry, Stanford University, Stanford, CA, USA.
Wheeler TJ; Department of Computer Science, University of Montana, Missoula, MT. USA.
Gerton JL; Stowers Institute for Medical Research, Kansas City, MO, USA.; University of Kansas Medical School, Department of Biochemistry and Molecular Biology and Cancer Center, University of Kansas, Kansas City, KS, USA.
Eichler EE; Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.
Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Timp W; Department of Molecular Biology and Genetics, Johns Hopkins University, Baltimore, MD, USA.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Dennis MY; Genome Center, MIND Institute, and Department of Biochemistry and Molecular Medicine, School of Medicine, University of California, Davis, Davis, CA, USA.
O'Neill RJ; Institute for Systems Genomics, University of Connecticut, Storrs, CT, USA.; Department of Molecular and Cell Biology, University of Connecticut, Storrs, CT, USA.
Zook JM; Biosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, MD, USA.
Schatz MC; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Pevzner PA; Department of Computer Science and Engineering, University of California at San Diego, San Diego, CA, USA.
Diekhans M; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.
Langley CH; Department of Evolution and Ecology, University of California Davis, Davis, CA, USA.
Alexandrov IA; Vavilov Institute of General Genetics, Moscow, Russia.; Center for Algorithmic Biotechnology, Institute of Translational Biomedicine, Saint Petersburg State University, Saint Petersburg, Russia.; Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
Miga KH; UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA, USA.; Department of Biomolecular Engineering, University of California Santa Cruz, CA, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2022 Apr; Vol. 376 (6588), pp. eabl4178. Date of Electronic Publication: 2022 Apr 01.
Typ publikacji:
Journal Article; Research Support, N.I.H., Intramural; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Chromosome Mapping*
Epigenesis, Genetic*
Genome, Human*
Centromere/*genetics
Evolution, Molecular ; Genomics ; Humans ; Repetitive Sequences, Nucleic Acid
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Author Correction: Dense sampling of bird diversity increases power of comparative genomics
Autorzy:
Feng, Shaohong
Stiller, Josefin
Deng, Yuan
Armstrong, Joel
Fang, Qi
Reeve, Andrew Hart
Xie, Duo
Chen, Guangji
Guo, Chunxue
Faircloth, Brant C.
Petersen, Bent
Wang, Zongji
Zhou, Qi
Diekhans, Mark
Chen, Wanjun
Andreu-Sánchez, Sergio
Margaryan, Ashot
Howard, Jason Travis
Parent, Carole
Pacheco, George
Sinding, Mikkel-Holger S.
Puetz, Lara
Cavill, Emily
Ribeiro, Ângela M.
Eckhart, Leopold
Fjeldså, Jon
Hosner, Peter A.
Brumfield, Robb T.
Christidis, Les
Bertelsen, Mads F.
Sicheritz-Ponten, Thomas
Tietze, Dieter Thomas
Robertson, Bruce C.
Song, Gang
Borgia, Gerald
Claramunt, Santiago
Lovette, Irby J.
Cowen, Saul J.
Njoroge, Peter
Dumbacher, John Philip
Ryder, Oliver A.
Fuchs, Jérôme
Bunce, Michael
Burt, David W.
Cracraft, Joel
Meng, Guanliang
Hackett, Shannon J.
Ryan, Peter G.
Jønsson, Knud Andreas
Jamieson, Ian G.
da Fonseca, Rute R.
Braun, Edward L.
Houde, Peter
Mirarab, Siavash
Suh, Alexander
Hansson, Bengt
Ponnikas, Suvi
Sigeman, Hanna
Stervander, Martin
Frandsen, Paul B.
van der Zwan, Henriette
van der Sluis, Rencia
Visser, Carina
Balakrishnan, Christopher N.
Clark, Andrew G.
Fitzpatrick, John W.
Bowman, Reed
Chen, Nancy
Cloutier, Alison
Sackton, Timothy B.
Edwards, Scott V.
Foote, Dustin J.
Shakya, Subir B.
Sheldon, Frederick H.
Vignal, Alain
Soares, André E. R.
Shapiro, Beth
González-Solís, Jacob
Ferrer-Obiol, Joan
Rozas, Julio
Riutort, Marta
Tigano, Anna
Friesen, Vicki
Dalén, Love
Urrutia, Araxi O.
Székely, Tamás
Liu, Yang
Campana, Michael G.
Corvelo, André
Fleischer, Robert C.
Rutherford, Kim M.
Gemmell, Neil J.
Dussex, Nicolas
Mouritsen, Henrik
Thiele, Nadine
Delmore, Kira
Liedvogel, Miriam
Franke, Andre
Hoeppner, Marc P.
Krone, Oliver
Fudickar, Adam M.
Milá, Borja
Ketterson, Ellen D.
Fidler, Andrew Eric
Friis, Guillermo
Parody-Merino, Ángela M.
Battley, Phil F.
Cox, Murray P.
Lima, Nicholas Costa Barroso
Prosdocimi, Francisco
Parchman, Thomas Lee
Schlinger, Barney A.
Loiselle, Bette A.
Blake, John G.
Lim, Haw Chuan
Day, Lainy B.
Fuxjager, Matthew J.
Baldwin, Maude W.
Braun, Michael J.
Wirthlin, Morgan
Dikow, Rebecca B.
Ryder, T. Brandt
Camenisch, Glauco
Keller, Lukas F.
DaCosta, Jeffrey M.
Hauber, Mark E.
Louder, Matthew I. M.
Witt, Christopher C.
McGuire, Jimmy A.
Mudge, Joann
Megna, Libby C.
Carling, Matthew D.
Wang, Biao
Taylor, Scott A.
Del-Rio, Glaucia
Aleixo, Alexandre
Vasconcelos, Ana Tereza Ribeiro
Mello, Claudio V.
Weir, Jason T.
Haussler, David
Li, Qiye
Yang, Huanming
Wang, Jian
Lei, Fumin
Rahbek, Carsten
Gilbert, M. Thomas P.
Graves, Gary R.
Jarvis, Erich D.
Paten, Benedict
Zhang, Guojie
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Źródło:
Nature; April 2021, Vol. 592 Issue: 7856 pE24-E24, 1p
Periodyk
Szczegóły
Tytuł:
Towards complete and error-free genome assemblies of all vertebrate species
Autorzy:
Rhie, Arang
McCarthy, Shane A.Aff2, Aff3
Fedrigo, Olivier
Damas, Joana
Formenti, GiulioAff4, Aff6
Koren, Sergey
Uliano-Silva, MarcelaAff7, Aff8
Chow, William
Fungtammasan, Arkarachai
Kim, Juwan
Lee, Chul
Ko, Byung June
Chaisson, Mark
Gedman, Gregory L.
Cantin, Lindsey J.
Thibaud-Nissen, Francoise
Haggerty, Leanne
Bista, IlianaAff2, Aff3
Smith, Michelle
Haase, Bettina
Mountcastle, Jacquelyn
Winkler, SylkeAff15, Aff16
Paez, SadyeAff4, Aff6
Howard, Jason
Vernes, Sonja C.Aff18, Aff19, Aff20
Lama, Tanya M.
Grutzner, Frank
Warren, Wesley C.
Balakrishnan, Christopher N.
Burt, Dave
George, Julia M.
Biegler, Matthew T.
Iorns, David
Digby, Andrew
Eason, Daryl
Robertson, Bruce
Edwards, Taylor
Wilkinson, Mark
Turner, George
Meyer, Axel
Kautt, Andreas F.Aff33, Aff34
Franchini, Paolo
Detrich, III, H. William
Svardal, HannesAff36, Aff37
Wagner, Maximilian
Naylor, Gavin J. P.
Pippel, MartinAff15, Aff40
Malinsky, MilanAff3, Aff41
Mooney, Mark
Simbirsky, Maria
Hannigan, Brett T.
Pesout, Trevor
Houck, Marlys
Misuraca, Ann
Kingan, Sarah B.
Hall, Richard
Kronenberg, Zev
Sović, IvanAff45, Aff46
Dunn, Christopher
Ning, Zemin
Hastie, Alex
Lee, Joyce
Selvaraj, Siddarth
Green, Richard E.Aff43, Aff49
Putnam, Nicholas H.
Gut, IvoAff51, Aff52
Ghurye, JayAff49, Aff53
Garrison, Erik
Sims, Ying
Collins, Joanna
Pelan, Sarah
Torrance, James
Tracey, Alan
Wood, Jonathan
Dagnew, Robel E.
Guan, DengfengAff2, Aff54
London, Sarah E.
Clayton, David F.
Mello, Claudio V.
Friedrich, Samantha R.
Lovell, Peter V.
Osipova, EkaterinaAff15, Aff40, Aff58
Al-Ajli, Farooq O.Aff59, Aff60, Aff61
Secomandi, Simona
Kim, HeebalAff10, Aff11, Aff63
Theofanopoulou, Constantina
Hiller, MichaelAff64, Aff65, Aff66
Zhou, Yang
Harris, Robert S.
Makova, Kateryna D.Aff68, Aff69, Aff70
Medvedev, PaulAff69, Aff70, Aff71, Aff72
Hoffman, Jinna
Masterson, Patrick
Clark, Karen
Martin, Fergal
Howe, Kevin
Flicek, Paul
Walenz, Brian P.
Kwak, WooriAff63, Aff73
Clawson, Hiram
Diekhans, Mark
Nassar, Luis
Paten, Benedict
Kraus, Robert H. S.Aff33, Aff74
Crawford, Andrew J.
Gilbert, M. Thomas P.Aff76, Aff77
Zhang, GuojieAff78, Aff79, Aff80, Aff81
Venkatesh, Byrappa
Murphy, Robert W.
Koepfli, Klaus-Peter
Shapiro, BethAff85, Aff86
Johnson, Warren E.Aff84, Aff87, Aff88
Di Palma, Federica
Marques-Bonet, TomasAff90, Aff91, Aff92, Aff93
Teeling, Emma C.
Warnow, Tandy
Graves, Jennifer Marshall
Ryder, Oliver A.Aff44, Aff97
Haussler, DavidAff43, Aff85
O’Brien, Stephen J.Aff98, Aff99
Korlach, Jonas
Lewin, Harris A.Aff5, Aff100, Aff101
Howe, KerstinAff3, IDs41586021034510_cor123
Myers, Eugene W.Aff15, Aff40, Aff102, IDs41586021034510_cor124
Durbin, RichardAff2, Aff3, IDs41586021034510_cor125
Phillippy, Adam M.Aff1, IDs41586021034510_cor126
Jarvis, Erich D.Aff4, Aff6, Aff86, IDs41586021034510_cor127
Pokaż więcej
Źródło:
Nature: International weekly journal of science. 592(7856):737-746
Czasopismo naukowe
Szczegóły
Wyświetlanie 1-20 z 161

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