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Tytuł:
Surprise RNA paints colorful patterns on butterfly wings.
Autorzy:
Pennisi E
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Źródło:
Science (New York, N.Y.) [Science] 2024 Mar 08; Vol. 383 (6687), pp. 1039-1040. Date of Electronic Publication: 2024 Mar 07.
Typ publikacji:
Wiadomości
MeSH Terms:
Butterflies*/anatomy & histology
Butterflies*/genetics
Wings, Animal*/anatomy & histology
Wings, Animal*/physiology
RNA Editing*
Pigmentation*/genetics
RNA, Long Noncoding*/genetics
Animals
Periodyk
Tytuł:
Harnessing ADAR-Mediated Site-Specific RNA Editing in Immune-Related Disease: Prediction and Therapeutic Implications.
Autorzy:
Weng S; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.
Yang X; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.
Yu N; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.
Wang PC; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.
Xiong S; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.
Ruan H; Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China.; MOE Key Laboratory of Geriatric Diseases and Immunology, Suzhou Medical College of Soochow University, Suzhou 215123, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Dec 26; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 26.
Typ publikacji:
Journal Article; Review
MeSH Terms:
RNA Editing*/genetics
Immune System Diseases*
Animals ; Humans ; Hydrolases ; Adenosine/genetics ; Homeostasis ; RNA
Czasopismo naukowe
Tytuł:
Deep transcriptome profiling reveals limited conservation of A-to-I RNA editing in Xenopus.
Autorzy:
Nguyen TA; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore, Singapore.; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.
Heng JWJ; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore, Singapore.; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.
Ng YT; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore, Singapore.; School of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Sun R; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore, Singapore.; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.
Fisher S; Faculty of Life Sciences, The Mina and Everard Goodman, Bar-Ilan University, Ramat Gan, Israel.
Oguz G; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.
Kaewsapsak P; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.; Department of Biochemistry, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Xue S; Institute of Molecular and Cell Biology, Agency for Science Technology and Research, Singapore, Singapore.; Department of Biological Sciences, National University of Singapore, Singapore, Singapore.
Reversade B; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.; Institute of Molecular and Cell Biology, Agency for Science Technology and Research, Singapore, Singapore.; Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.; Department of Medical Genetics, School of Medicine (KUSoM), Koç University, Istanbul, Turkey.
Ramasamy A; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore.
Eisenberg E; Raymond and Beverly Sackler School of Physics and Astronomy, Tel Aviv University, Tel Aviv, Israel.
Tan MH; School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore, Singapore. .; Genome Institute of Singapore, Agency for Science Technology and Research, Singapore, Singapore. .; HP-NTU Digital Manufacturing Corporate Lab, Nanyang Technological University, Singapore, Singapore. .
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Źródło:
BMC biology [BMC Biol] 2023 Nov 09; Vol. 21 (1), pp. 251. Date of Electronic Publication: 2023 Nov 09.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA Editing*
RNA*
Animals ; Female ; Xenopus laevis/genetics ; Xenopus laevis/metabolism ; Gene Expression Profiling ; Mammals/genetics ; Transcriptome ; Adenosine Deaminase/genetics ; Adenosine Deaminase/metabolism
Czasopismo naukowe
Tytuł:
APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016.
Autorzy:
O'Toole Á; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh EH9 3FL, UK.
Neher RA; Biozentrum, University of Basel and Swiss Institute of Bioinformatics, Basel, Switzerland.
Ndodo N; Nigeria Centers for Disease Control and Prevention, Abuja, Nigeria.
Borges V; National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal.
Gannon B; UK Health Security Agency, Porton Down, Salisbury SP4 0JG, UK.
Gomes JP; National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal.; Veterinary and Animal Research Centre (CECAV), Faculty of Veterinary Medicine, Lusófona University, Lisbon, Portugal.
Groves N; UK Health Security Agency, London E14 5EA, UK.
King DJ; CBR Division, Defence Science and Technology Laboratory, Salisbury SP4 0JQ, UK.
Maloney D; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh EH9 3FL, UK.
Lemey P; Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.
Lewandowski K; UK Health Security Agency, Porton Down, Salisbury SP4 0JG, UK.
Loman N; UK Health Security Agency, London E14 5EA, UK.; University of Birmingham, Birmingham B15 2TT, UK.
Myers R; UK Health Security Agency, London E14 5EA, UK.
Omah IF; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh EH9 3FL, UK.; Department of Parasitology and Entomology, Nnamdi Azikiwe University, Awka, Anambra State, Nigeria.
Suchard MA; Department of Biostatistics, Fielding School of Public Health, University of California, Los Angeles, CA 90095, USA.
Worobey M; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85719, USA.
Chand M; UK Health Security Agency, London E14 5EA, UK.; UKHSA Guys and St Thomas' NHS Trust, London SE1 7EH, UK.
Ihekweazu C; Nigeria Centers for Disease Control and Prevention, Abuja, Nigeria.
Ulaeto D; UK Health Security Agency, London E14 5EA, UK.
Adetifa I; Nigeria Centers for Disease Control and Prevention, Abuja, Nigeria.
Rambaut A; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh EH9 3FL, UK.
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Źródło:
Science (New York, N.Y.) [Science] 2023 Nov 03; Vol. 382 (6670), pp. 595-600. Date of Electronic Publication: 2023 Nov 02.
Typ publikacji:
Journal Article
MeSH Terms:
APOBEC Deaminases*/genetics
Mpox (monkeypox)*/epidemiology
Mpox (monkeypox)*/genetics
Mpox (monkeypox)*/transmission
Monkeypox virus*/genetics
Monkeypox virus*/metabolism
Viral Zoonoses*/genetics
Viral Zoonoses*/transmission
RNA Editing*
Animals ; Humans ; Africa, Central/epidemiology ; Africa, Western/epidemiology ; Disease Outbreaks ; Mutation ; Phylogeny
Czasopismo naukowe
Tytuł:
FLARE: a fast and flexible workflow for identifying RNA editing foci.
Autorzy:
Kofman E; Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.; Sanford Stem Cell Institute Innovation Center and Stem Cell Program, University of California San Diego, La Jolla, CA, USA.; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
Yee B; Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.; Sanford Stem Cell Institute Innovation Center and Stem Cell Program, University of California San Diego, La Jolla, CA, USA.; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
Medina-Munoz HC; Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.; Sanford Stem Cell Institute Innovation Center and Stem Cell Program, University of California San Diego, La Jolla, CA, USA.; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.
Yeo GW; Department of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA. .; Sanford Stem Cell Institute Innovation Center and Stem Cell Program, University of California San Diego, La Jolla, CA, USA. .; Institute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA. .
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2023 Oct 02; Vol. 24 (1), pp. 370. Date of Electronic Publication: 2023 Oct 02.
Typ publikacji:
Journal Article
MeSH Terms:
RNA Editing*
RNA*
Workflow ; RNA-Seq ; Binding Sites ; APOBEC-1 Deaminase
Czasopismo naukowe
Tytuł:
A Genome-Wide Analysis of the Pentatricopeptide Repeat Protein Gene Family in Two Kiwifruit Species with an Emphasis on the Role of RNA Editing in Pathogen Stress.
Autorzy:
Zhang A; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China.
Xiong Y; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China.; University of Chinese Academy of Sciences, Beijing 100049, China.
Liu F; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China.
Zhang X; Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan 430074, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Sep 05; Vol. 24 (18). Date of Electronic Publication: 2023 Sep 05.
Typ publikacji:
Journal Article
MeSH Terms:
RNA Editing*/genetics
Actinidia*/genetics
Disease Resistance/genetics ; Fruit/genetics ; Chloroplasts
Czasopismo naukowe
Tytuł:
Applications of CRISPR/Cas13-Based RNA Editing in Plants.
Autorzy:
Kavuri NR; Texas A&M AgriLife Research and Extension Center, Texas A&M University System, 2415 E. Highway 83, Weslaco, TX 78596, USA.; Department of Plant Pathology and Microbiology, Texas A&M University System, 2132 TAMU, College Station, TX 77843, USA.
Ramasamy M; Texas A&M AgriLife Research and Extension Center, Texas A&M University System, 2415 E. Highway 83, Weslaco, TX 78596, USA.
Qi Y; Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD 20742, USA.; Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, MD 20850, USA.
Mandadi K; Texas A&M AgriLife Research and Extension Center, Texas A&M University System, 2415 E. Highway 83, Weslaco, TX 78596, USA.; Department of Plant Pathology and Microbiology, Texas A&M University System, 2132 TAMU, College Station, TX 77843, USA.; Institute for Advancing Health Through Agriculture, Texas A&M AgriLife, College Station, TX 77845, USA.
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Źródło:
Cells [Cells] 2022 Aug 27; Vol. 11 (17). Date of Electronic Publication: 2022 Aug 27.
Typ publikacji:
Journal Article; Review; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
CRISPR-Cas Systems*/genetics
RNA Editing*/genetics
Gene Editing ; Plants/genetics ; RNA/genetics
Czasopismo naukowe
Tytuł:
Lessons from discovery of true ADAR RNA editing sites in a human cell line.
Autorzy:
Wang F; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Cao H; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China. .
Xia Q; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Liu Z; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Wang M; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Gao F; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Xu D; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Deng B; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Diao Y; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China.
Kapranov P; Institute of Genomics, School of Medicine, Huaqiao University, 668 Jimei Road, Xiamen, 361021, China. .; State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, 361102, China. .
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Źródło:
BMC biology [BMC Biol] 2023 Jul 19; Vol. 21 (1), pp. 160. Date of Electronic Publication: 2023 Jul 19.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA Editing*
Proteome*/genetics
Humans ; RNA/metabolism ; RNA, Messenger/metabolism ; Cell Line ; Adenosine Deaminase/genetics ; Adenosine Deaminase/metabolism
Czasopismo naukowe
Tytuł:
Targeting RNA Structure to Inhibit Editing in Trypanosomes.
Autorzy:
Acquah FA; Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Mooers BHM; Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.; Stephenson Cancer Center, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.; Laboratory of Biomolecular Structure and Function, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Jun 14; Vol. 24 (12). Date of Electronic Publication: 2023 Jun 14.
Typ publikacji:
Journal Article
MeSH Terms:
Trypanosoma*/drug effects
RNA Editing*/drug effects
Trypanocidal Agents*/chemistry
Trypanocidal Agents*/pharmacology
Small Molecule Libraries*/chemistry
Small Molecule Libraries*/pharmacology
RNA, Protozoan/chemistry ; RNA, Mitochondrial/chemistry ; Nucleic Acid Conformation/drug effects ; Molecular Dynamics Simulation
Czasopismo naukowe
Tytuł:
Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.
Autorzy:
Liu S; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Wang H; Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.
Li X; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Zhang F; School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Lee JKJ; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Li Z; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Yu C; Department of Physiology and Biophysics, University of California, Irvine, CA, USA.
Hu JJ; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Zhao X; School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Suematsu T; Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.
Alvarez-Cabrera AL; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
Liu Q; Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.
Zhang L; School of Life Science and Technology, ShanghaiTech University, Shanghai, China.; Shanghai Clinical Research and Trial Center, Shanghai 201210, China.
Huang L; Department of Physiology and Biophysics, University of California, Irvine, CA, USA.
Aphasizheva I; Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.
Aphasizhev R; Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.; Department of Biochemistry, Boston University Medical Campus, Boston, MA, USA.
Zhou ZH; Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.; California NanoSystems Institute, University of California, Los Angeles, CA, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2023 Jul 07; Vol. 381 (6653), pp. eadg4725. Date of Electronic Publication: 2023 Jul 07.
Typ publikacji:
Journal Article
MeSH Terms:
RNA Editing*
RNA, Guide, Kinetoplastida*/chemistry
RNA, Messenger*/chemistry
RNA, Messenger*/genetics
Trypanosoma brucei brucei*/genetics
RNA Stability*
RNA, Protozoan*/chemistry
RNA, Protozoan*/genetics
Cryoelectron Microscopy ; Protozoan Proteins/genetics ; Protozoan Proteins/metabolism
Czasopismo naukowe
Tytuł:
Structure of the T. brucei kinetoplastid RNA editing substrate-binding complex core component, RESC5.
Autorzy:
Salinas R; Department of Biochemistry, Duke University School of Medicine, DUMC, Durham, NC, United States of America.
Cannistraci E; Department of Biochemistry, Duke University School of Medicine, DUMC, Durham, NC, United States of America.
Schumacher MA; Department of Biochemistry, Duke University School of Medicine, DUMC, Durham, NC, United States of America.
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Źródło:
PloS one [PLoS One] 2023 Mar 02; Vol. 18 (3), pp. e0282155. Date of Electronic Publication: 2023 Mar 02 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural
MeSH Terms:
RNA Editing*
RNA, Guide, Kinetoplastida*/genetics
Arginine ; Catalysis ; Cytoplasm
Czasopismo naukowe
Tytuł:
RNA Editing Alterations Define Disease Manifestations in the Progression of Experimental Autoimmune Encephalomyelitis (EAE).
Autorzy:
Dafou D; Department of Genetics, Development, and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Kanata E; Neurodegenerative Diseases Research Group, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Pettas S; Department of Genetics, Development, and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Bekas N; Department of Genetics, Development, and Molecular Biology, School of Biology, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Dimitriadis A; Neurodegenerative Diseases Research Group, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Kempapidou G; Neurodegenerative Diseases Research Group, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
Lagoudaki R; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Theotokis P; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Touloumi O; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Delivanoglou N; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Kesidou E; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Xanthopoulos K; Laboratory of Pharmacology, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.; Institute of Applied Biosciences, Centre for Research and Technology Hellas, 603 61 Thessaloniki, Greece.
Grigoriadis N; Multiple Sclerosis Center, B' Neurological Department AHEPA Hospital Thessaloniki, Aristotle University of Thessaloniki, 546 36 Thessaloniki, Greece.
Papavasiliou FN; Immune Diversity (D150) Deutsches Krebsforschungszentrum Im Neuenheimer Feld, 280 69120 Heidelberg, Germany.
Sklaviadis T; Neurodegenerative Diseases Research Group, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.; Laboratory of Pharmacology, Department of Pharmacy, School of Health Sciences, Aristotle University of Thessaloniki, 541 24 Thessaloniki, Greece.
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Źródło:
Cells [Cells] 2022 Nov 12; Vol. 11 (22). Date of Electronic Publication: 2022 Nov 12.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
RNA Editing*/genetics
Encephalomyelitis, Autoimmune, Experimental*/genetics
Humans ; Mice ; Animals ; APOBEC-1 Deaminase/genetics ; RNA, Double-Stranded ; Mutagenesis, Site-Directed ; Mice, Knockout
Czasopismo naukowe
Tytuł:
Exploring the RNA Editing Events and Their Potential Regulatory Roles in Tea Plant ( Camellia sinensis L.).
Autorzy:
Zhang M; College of Horticulture, Northwest A&F University, Yangling, Xianyang 712100, China.
Li Z; College of Horticulture, Northwest A&F University, Yangling, Xianyang 712100, China.
Wang Z; College of Horticulture, Northwest A&F University, Yangling, Xianyang 712100, China.
Xiao Y; College of Language and Culture, Northwest A&F University, Yangling, Xianyang 712100, China.
Bao L; College of Horticulture, Northwest A&F University, Yangling, Xianyang 712100, China.
Wang M; College of Food Science and Engineering, Northwest A&F University, Yangling, Xianyang 712100, China.
An C; State Key Laboratory of Natural and Biomimetic Drugs, Department of Chemical Biology, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China.
Gao Y; College of Horticulture, Northwest A&F University, Yangling, Xianyang 712100, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2022 Nov 07; Vol. 23 (21). Date of Electronic Publication: 2022 Nov 07.
Typ publikacji:
Journal Article
MeSH Terms:
RNA Editing*
Camellia sinensis*/genetics
Camellia sinensis*/metabolism
Chloroplasts/genetics ; Chloroplasts/metabolism ; RNA/metabolism ; Tea/metabolism ; RNA, Plant/genetics ; Gene Expression Regulation, Plant ; Plant Proteins/genetics ; Plant Proteins/metabolism
Czasopismo naukowe
Tytuł:
Multiple lineages of monkeypox virus detected in the United States, 2021-2022.
Autorzy:
Gigante CM; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Korber B; T-6: Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, New Mexico, USA; New Mexico Consortium, Los Alamos, NM, USA.
Seabolt MH; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.; Leidos Inc., Reston, VA 20190, USA.
Wilkins K; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Davidson W; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Rao AK; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Zhao H; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Smith TG; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Hughes CM; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Minhaj F; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Waltenburg MA; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Theiler J; ISR-3: Space Data Science and Systems, Los Alamos National Laboratory, Los Alamos, NM, USA.
Smole S; Massachusetts Department of Public Health, Jamaica Plain, MA, USA.
Gallagher GR; Massachusetts Department of Public Health, Jamaica Plain, MA, USA.
Blythe D; Infectious Disease Epidemiology and Outbreak Response Bureau, Maryland Department of Health, Baltimore, MD, USA.
Myers R; Infectious Disease Epidemiology and Outbreak Response Bureau, Maryland Department of Health, Baltimore, MD, USA.
Schulte J; Dallas County Health and Human Services Public Health Laboratory, Dallas, Texas, USA.
Stringer J; Dallas County Health and Human Services Public Health Laboratory, Dallas, Texas, USA.
Lee P; Florida Department of Health Bureau of Public Health Laboratories-Jacksonville, Jacksonville, FL, USA.
Mendoza RM; Florida Department of Health in Broward County, Hollywood, FL, USA.
Griffin-Thomas LA; Virginia Department of General Services, Division of Consolidated Laboratory Services, Richmond, VA, USA.
Crain J; Virginia Department of Health, Richmond, VA, USA.
Murray J; Utah Department of Health and Human Services, Salt Lake City, UT, USA.
Atkinson A; Utah Department of Health and Human Services, Salt Lake City, UT, USA.
Gonzalez AH; Sacramento County Public Health, Sacramento, CA, USA.
Nash J; Sacramento County Public Health, Sacramento, CA, USA.
Batra D; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Damon I; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
McQuiston J; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Hutson CL; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
McCollum AM; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Li Y; National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2022 Nov 04; Vol. 378 (6619), pp. 560-565. Date of Electronic Publication: 2022 Oct 20.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.
MeSH Terms:
Mpox (monkeypox)*/enzymology
Mpox (monkeypox)*/virology
Monkeypox virus*/genetics
Monkeypox virus*/isolation & purification
APOBEC Deaminases*/metabolism
Host-Pathogen Interactions*
RNA Editing*
Humans ; Nigeria/epidemiology ; United States/epidemiology ; Mutation ; Evolution, Molecular ; Adenosine/genetics ; Cytidine/genetics
Czasopismo naukowe
Tytuł:
Genome-wide detection of RNA editing events during the hair follicles cycle of Tianzhu white yak.
Autorzy:
Zhou X; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Bao P; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Zhang X; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Guo X; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Liang C; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Chu M; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China.; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China.
Wu X; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China. .; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China. .
Yan P; Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, 730050, Lanzhou, P.R. China. .; Key Laboratory of Yak Breeding Engineering Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, 730050, Lanzhou, P.R. China. .
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Źródło:
BMC genomics [BMC Genomics] 2022 Oct 31; Vol. 23 (1), pp. 737. Date of Electronic Publication: 2022 Oct 31.
Typ publikacji:
Journal Article
MeSH Terms:
Hair Follicle*
RNA Editing*
Animals ; Cattle/genetics ; Genome ; Sequence Analysis, RNA ; Gene Regulatory Networks
Czasopismo naukowe
Tytuł:
A Comprehensive Evolutionary Study of Chloroplast RNA Editing in Gymnosperms: A Novel Type of G-to-A RNA Editing Is Common in Gymnosperms.
Autorzy:
Huang KY; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.; University of Chinese Academy of Sciences, Beijing 100049, China.
Kan SL; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Shen TT; School of Earth Sciences, East China University of Technology, Nanchang 330013, China.
Gong P; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Feng YY; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.; University of Chinese Academy of Sciences, Beijing 100049, China.
Du H; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
Zhao YP; Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou 310058, China.
Wan T; Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.
Wang XQ; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.; University of Chinese Academy of Sciences, Beijing 100049, China.
Ran JH; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.; University of Chinese Academy of Sciences, Beijing 100049, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2022 Sep 16; Vol. 23 (18). Date of Electronic Publication: 2022 Sep 16.
Typ publikacji:
Journal Article
MeSH Terms:
RNA Editing*/genetics
RNA, Chloroplast*/genetics
Base Sequence ; Chloroplasts/genetics ; Cycadopsida/genetics ; Evolution, Molecular ; Phylogeny
Czasopismo naukowe
Tytuł:
A-to-I RNA editing of Filamin A regulates cellular adhesion, migration and mechanical properties.
Autorzy:
Jain M; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
Weber A; Department of Nanobiotechnology, Institute for Biophysics, University of Natural Resources and Life Sciences Vienna (BOKU), Austria.
Maly K; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
Manjaly G; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
Deek J; Department of Physics, Cellular Biophysics E27, Technical University of Munich, Garching, Germany.
Tsvyetkova O; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
Stulić M; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
Toca-Herrera JL; Department of Nanobiotechnology, Institute for Biophysics, University of Natural Resources and Life Sciences Vienna (BOKU), Austria.
Jantsch MF; Division of Cell Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Austria.
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Źródło:
The FEBS journal [FEBS J] 2022 Aug; Vol. 289 (15), pp. 4580-4601. Date of Electronic Publication: 2022 Mar 09.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Actins*/genetics
Actins*/metabolism
Filamins*/genetics
Filamins*/metabolism
RNA Editing*
Animals ; Humans ; Mechanotransduction, Cellular/genetics ; Mice ; RNA Precursors/metabolism
Czasopismo naukowe
Tytuł:
U-to-C RNA editing by synthetic PPR-DYW proteins in bacteria and human culture cells.
Autorzy:
Ichinose M; EditForce, Inc., Fukuoka, Japan. .; Faculty of Agriculture, Kyushu University, Fukuoka, Japan. .; Center for Gene Research, Nagoya University, Nagoya, Japan. .; Institute of Transformative Bio-Molecules, Nagoya University, Nagoya, Japan. .
Kawabata M; EditForce, Inc., Fukuoka, Japan.
Akaiwa Y; EditForce, Inc., Fukuoka, Japan.
Shimajiri Y; EditForce, Inc., Fukuoka, Japan.
Nakamura I; EditForce, Inc., Fukuoka, Japan.
Tamai T; EditForce, Inc., Fukuoka, Japan.
Nakamura T; EditForce, Inc., Fukuoka, Japan.; Faculty of Agriculture, Kyushu University, Fukuoka, Japan.
Yagi Y; EditForce, Inc., Fukuoka, Japan.
Gutmann B; EditForce, Inc., Fukuoka, Japan. .
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Źródło:
Communications biology [Commun Biol] 2022 Sep 15; Vol. 5 (1), pp. 968. Date of Electronic Publication: 2022 Sep 15.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Cytidine*/genetics
Cytidine*/metabolism
RNA Editing*
Adenosine/metabolism ; Bacteria/genetics ; Bacteria/metabolism ; Guanosine/metabolism ; Humans ; Inosine ; Nucleotides/metabolism ; Plant Proteins/genetics ; RNA/metabolism ; Uridine/metabolism
Czasopismo naukowe
Tytuł:
The roles of APOBEC-mediated RNA editing in SARS-CoV-2 mutations, replication and fitness.
Autorzy:
Kim K; Molecular and Computational Biology Section, University of Southern California, Los Angeles, CA, 90089, USA.
Calabrese P; Quantitative and Computational Biology Department, University of Southern California, Los Angeles, CA, 90089, USA.
Wang S; Molecular and Computational Biology Section, University of Southern California, Los Angeles, CA, 90089, USA.
Qin C; Section of Infection and Immunity, Herman Ostrow School of Dentistry, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, 90089, USA.
Rao Y; Section of Infection and Immunity, Herman Ostrow School of Dentistry, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, 90089, USA.
Feng P; Section of Infection and Immunity, Herman Ostrow School of Dentistry, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, 90089, USA.
Chen XS; Molecular and Computational Biology Section, University of Southern California, Los Angeles, CA, 90089, USA. .; Genetic, Molecular and Cellular Biology Program, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089, USA. .; Center of Excellence in NanoBiophysics, University of Southern California, Los Angeles, CA, 90089, USA. .; Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, 90089, USA. .
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Źródło:
Scientific reports [Sci Rep] 2022 Sep 13; Vol. 12 (1), pp. 14972. Date of Electronic Publication: 2022 Sep 13.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms:
COVID-19*/genetics
RNA Editing*
APOBEC Deaminases/genetics ; APOBEC Deaminases/metabolism ; Caco-2 Cells ; Cytidine Deaminase ; Humans ; Mutation ; Pandemics ; Proteins ; RNA, Viral/genetics ; RNA, Viral/metabolism ; SARS-CoV-2/genetics
Czasopismo naukowe
Tytuł:
A-to-I nonsynonymous RNA editing was significantly enriched in the ubiquitination site and correlated with clinical features and immune response.
Autorzy:
Li H; Department of Obstetrics and Gynecology, Beijing Tiantan Hospital, Capital Medical University, Bejing, China.
Wang J; CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Tu J; Fudan University Shanghai Cancer Center and Institutes of Biomedical Sciences; Cancer Institutes; Key Laboratory of Breast Cancer in Shanghai; The Shanghai Key Laboratory of Medical Epigenetics; The International Co-Laboratory of Medical Epigenetics and Metabolism, Ministry of Science and Technology; Shanghai Medical College, Fudan University, Shanghai, 200032, China. .
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Źródło:
Scientific reports [Sci Rep] 2022 Sep 05; Vol. 12 (1), pp. 15079. Date of Electronic Publication: 2022 Sep 05.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Proteomics*
RNA Editing*/genetics
Base Sequence ; Immunity ; Ubiquitination
Czasopismo naukowe

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