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Wyszukujesz frazę ""Escherichia coli Proteins"" wg kryterium: Temat


Tytuł :
Cryo-EM structure of the nonameric CsgG-CsgF complex and its implications for controlling curli biogenesis in Enterobacteriaceae.
Autorzy :
Zhang M; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China.; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Chaoyang District, Beijing, China.
Shi H; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Chaoyang District, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China.
Zhang X; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Chaoyang District, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China.
Zhang X; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Chaoyang District, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China.
Huang Y; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Chaoyang District, Beijing, China.; University of Chinese Academy of Sciences, Beijing, China.
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Źródło :
PLoS biology [PLoS Biol] 2020 Jun 19; Vol. 18 (6), pp. e3000748. Date of Electronic Publication: 2020 Jun 19 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol. Subsets: MEDLINE
MeSH Terms :
Cryoelectron Microscopy*
Protein Multimerization*
Amyloid/*ultrastructure
Escherichia coli/*metabolism
Escherichia coli/*ultrastructure
Escherichia coli Proteins/*ultrastructure
Multiprotein Complexes/*ultrastructure
Amino Acid Sequence ; DNA Mutational Analysis ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/metabolism ; Models, Molecular ; Peptides/chemistry ; Peptides/metabolism ; Protein Binding
Czasopismo naukowe
Tytuł :
The carboxy-terminal insert in the Q-loop is needed for functionality of Escherichia coli cytochrome bd-I.
Autorzy :
Goojani HG; Department of Molecular Cell Biology, Amsterdam Institute for Molecules, Medicines and Systems, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, the Netherlands.
Konings J; Department of Molecular Cell Biology, Amsterdam Institute for Molecules, Medicines and Systems, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, the Netherlands.
Hakvoort H; Department of Molecular Cell Biology, Amsterdam Institute for Molecules, Medicines and Systems, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, the Netherlands.
Hong S; Department of Biochemistry, University of Illinois, 600 S. Mathews Avenue, Urbana, IL 61801, United States.
Gennis RB; Department of Biochemistry, University of Illinois, 600 S. Mathews Avenue, Urbana, IL 61801, United States.
Sakamoto J; Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Kawazu 680-4, Iizuka, Fukuoka-ken 820-8502, Japan.
Lill H; Department of Molecular Cell Biology, Amsterdam Institute for Molecules, Medicines and Systems, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, the Netherlands.
Bald D; Department of Molecular Cell Biology, Amsterdam Institute for Molecules, Medicines and Systems, Faculty of Sciences, Vrije Universiteit Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, the Netherlands. Electronic address: .
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Źródło :
Biochimica et biophysica acta. Bioenergetics [Biochim Biophys Acta Bioenerg] 2020 Jun 01; Vol. 1861 (5-6), pp. 148175. Date of Electronic Publication: 2020 Feb 12.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Elsevier Country of Publication: Netherlands NLM ID: 101731706 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-2650 (Electronic) Linking ISSN: 00052728 NLM ISO Abbreviation: Biochim Biophys Acta Bioenerg Subsets: MEDLINE
MeSH Terms :
Cytochrome b Group/*chemistry
Cytochrome b Group/*metabolism
Electron Transport Chain Complex Proteins/*chemistry
Electron Transport Chain Complex Proteins/*metabolism
Escherichia coli/*metabolism
Escherichia coli Proteins/*chemistry
Escherichia coli Proteins/*metabolism
Oxidoreductases/*chemistry
Oxidoreductases/*metabolism
Alanine/genetics ; Amino Acid Sequence ; Cell Membrane/metabolism ; Cytochrome b Group/isolation & purification ; Electron Transport Chain Complex Proteins/isolation & purification ; Escherichia coli/growth & development ; Escherichia coli Proteins/isolation & purification ; Heme/metabolism ; Mutagenesis/genetics ; Mutant Proteins/chemistry ; Mutant Proteins/isolation & purification ; Mutant Proteins/metabolism ; Oxidoreductases/isolation & purification ; Oxygen Consumption ; Protein Structure, Secondary ; Structure-Activity Relationship
Czasopismo naukowe
Tytuł :
Genetic identification of the functional surface for RNA binding by Escherichia coli ProQ.
Autorzy :
Pandey S; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
Gravel CM; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
Stockert OM; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
Wang CD; Department of Biological Sciences, Mount Holyoke College, South Hadley, MA 01075, USA.
Hegner CL; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
LeBlanc H; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
Berry KE; Program in Biochemistry, Mount Holyoke College, South Hadley, MA 01075, USA.; Department of Chemistry, Mount Holyoke College, South Hadley, MA 01075, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 May 07; Vol. 48 (8), pp. 4507-4520.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
Escherichia coli Proteins/*chemistry
Escherichia coli Proteins/*metabolism
RNA, Bacterial/*metabolism
RNA-Binding Proteins/*chemistry
RNA-Binding Proteins/*metabolism
Escherichia coli Proteins/genetics ; Genetic Techniques ; Heat-Shock Proteins/genetics ; Heat-Shock Proteins/metabolism ; Models, Molecular ; Protein Binding ; Protein Domains
Czasopismo naukowe
Tytuł :
Principles of RNA and nucleotide discrimination by the RNA processing enzyme RppH.
Autorzy :
Gao A; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, 550 First Avenue, New York, NY 10016, USA.
Vasilyev N; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, 550 First Avenue, New York, NY 10016, USA.
Kaushik A; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, 550 First Avenue, New York, NY 10016, USA.
Duan W; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, 550 First Avenue, New York, NY 10016, USA.
Serganov A; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, 550 First Avenue, New York, NY 10016, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Apr 17; Vol. 48 (7), pp. 3776-3788.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
Acid Anhydride Hydrolases/*chemistry
Acid Anhydride Hydrolases/*metabolism
Escherichia coli Proteins/*chemistry
Escherichia coli Proteins/*metabolism
RNA/*metabolism
Acid Anhydride Hydrolases/antagonists & inhibitors ; Adenosine Triphosphate/metabolism ; Amino Acid Isomerases/metabolism ; Catalytic Domain ; Escherichia coli Proteins/antagonists & inhibitors ; Guanosine Diphosphate/metabolism ; Guanosine Triphosphate/metabolism ; Hydrogen-Ion Concentration ; Magnesium/chemistry ; Models, Molecular ; Nucleotides/chemistry ; Nucleotides/metabolism ; RNA/chemistry ; Substrate Specificity
Czasopismo naukowe
Tytuł :
Filamentation of the bacterial bi-functional alcohol/aldehyde dehydrogenase AdhE is essential for substrate channeling and enzymatic regulation.
Autorzy :
Pony P; Structure and Function of Bacterial Nanomachines - Institut Européen de Chimie et Biologie, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France.; Microbiologie fondamentale et pathogénicité, UMR 5234, CNRS, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France.
Rapisarda C; Structure and Function of Bacterial Nanomachines - Institut Européen de Chimie et Biologie, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France.; Microbiologie fondamentale et pathogénicité, UMR 5234, CNRS, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France.; UCB Celltech, Slough, SL1 3WE, UK.
Terradot L; UMR 5086 Molecular Microbiology and Structural Biochemistry, Institut de Biologie et Chimie des Protéines, CNRS-Université de Lyon, Lyon, France.
Marza E; Structure and Function of Bacterial Nanomachines - Institut Européen de Chimie et Biologie, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France. .; Microbiologie fondamentale et pathogénicité, UMR 5234, CNRS, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France. .
Fronzes R; Structure and Function of Bacterial Nanomachines - Institut Européen de Chimie et Biologie, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France. .; Microbiologie fondamentale et pathogénicité, UMR 5234, CNRS, University of Bordeaux, 2 rue Robert Escarpit, 33600, Pessac, France. .
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Źródło :
Nature communications [Nat Commun] 2020 Mar 18; Vol. 11 (1), pp. 1426. Date of Electronic Publication: 2020 Mar 18.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
MeSH Terms :
Alcohol Dehydrogenase/*chemistry
Alcohol Dehydrogenase/*metabolism
Aldehyde Oxidoreductases/*chemistry
Aldehyde Oxidoreductases/*metabolism
Aldehydes/*metabolism
Escherichia coli/*enzymology
Escherichia coli Proteins/*chemistry
Escherichia coli Proteins/*metabolism
Ethanol/*metabolism
Alcohol Dehydrogenase/genetics ; Aldehyde Oxidoreductases/genetics ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Escherichia coli Proteins/genetics ; Models, Molecular
Czasopismo naukowe
Tytuł :
Safeguarding intestine cells against enteropathogenic Escherichia coli by intracellular protein reaction, a preventive antibacterial mechanism.
Autorzy :
Qiu J; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Nie Y; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Zhao Y; School of Pharmaceutical Engineering and Life Science, Changzhou University, Changzhou, Jiangsu 213164, China.
Zhang Y; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Li L; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Wang R; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Wang M; Department of Infectious Diseases and Public Health, Jockey Club College of Veterinary Medicine and Life Sciences, City University of Hong Kong, Kowloon, Hong Kong SAR, China.
Chen S; Department of Infectious Diseases and Public Health, Jockey Club College of Veterinary Medicine and Life Sciences, City University of Hong Kong, Kowloon, Hong Kong SAR, China.
Wang J; School of Pharmaceutical Engineering and Life Science, Changzhou University, Changzhou, Jiangsu 213164, China; .
Li YQ; School of Physics, Shandong University, Jinan, Shandong 250100, China .
Xia J; Department of Chemistry, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China; .
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Mar 10; Vol. 117 (10), pp. 5260-5268. Date of Electronic Publication: 2020 Feb 24.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc. Natl. Acad. Sci. U.S.A. Subsets: MEDLINE
MeSH Terms :
Adaptor Proteins, Signal Transducing/*antagonists & inhibitors
Antimicrobial Cationic Peptides/*pharmacology
Enteropathogenic Escherichia coli/*drug effects
Escherichia coli Infections/*prevention & control
Escherichia coli Proteins/*antagonists & inhibitors
Host-Pathogen Interactions/*drug effects
Oncogene Proteins/*antagonists & inhibitors
Receptors, Cell Surface/*antagonists & inhibitors
Actins/metabolism ; Adaptor Proteins, Signal Transducing/chemistry ; Adaptor Proteins, Signal Transducing/metabolism ; Animals ; Antimicrobial Cationic Peptides/therapeutic use ; Caco-2 Cells ; Enteropathogenic Escherichia coli/metabolism ; Escherichia coli Proteins/chemistry ; Escherichia coli Proteins/metabolism ; Humans ; Intestinal Mucosa/metabolism ; Intestinal Mucosa/microbiology ; Mice ; Mice, Inbred C57BL ; Oncogene Proteins/chemistry ; Oncogene Proteins/metabolism ; Protein Binding ; Receptors, Cell Surface/chemistry ; Receptors, Cell Surface/metabolism ; Signal Transduction ; src Homology Domains
Czasopismo naukowe
Tytuł :
Hold It Right There! Gonococci Preserve Epithelium Integrity during Intimate Adherence.
Autorzy :
Dillard JP; Department of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI, USA. Electronic address: .
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Źródło :
Cell host & microbe [Cell Host Microbe] 2020 May 13; Vol. 27 (5), pp. 685-686.
Typ publikacji :
Journal Article; Comment
Journal Info :
Publisher: Cell Press Country of Publication: United States NLM ID: 101302316 Publication Model: Print Cited Medium: Internet ISSN: 1934-6069 (Electronic) Linking ISSN: 19313128 NLM ISO Abbreviation: Cell Host Microbe Subsets: MEDLINE
MeSH Terms :
Escherichia coli Proteins*
Uropathogenic Escherichia coli*
Animals ; Epithelium ; Mice ; Neisseria gonorrhoeae ; Nitric Oxide
Czasopismo naukowe
Tytuł :
Structure of a trapped radical transfer pathway within a ribonucleotide reductase holocomplex.
Autorzy :
Kang G; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge MA, USA.
Taguchi AT; Department of Chemistry, Massachusetts Institute of Technology, Cambridge MA, USA.
Stubbe J; Department of Biology, Massachusetts Institute of Technology, Cambridge MA, USA. .; Department of Chemistry, Massachusetts Institute of Technology, Cambridge MA, USA.
Drennan CL; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge MA, USA. .; Department of Biology, Massachusetts Institute of Technology, Cambridge MA, USA.; Department of Chemistry, Massachusetts Institute of Technology, Cambridge MA, USA.
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Źródło :
Science (New York, N.Y.) [Science] 2020 Apr 24; Vol. 368 (6489), pp. 424-427. Date of Electronic Publication: 2020 Mar 26.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE
MeSH Terms :
Escherichia coli Proteins/*chemistry
Ribonucleotide Reductases/*chemistry
Biocatalysis ; Catalytic Domain ; Cryoelectron Microscopy ; Escherichia coli Proteins/genetics ; Holoenzymes/chemistry ; Holoenzymes/genetics ; Protein Conformation ; Ribonucleotide Reductases/genetics ; Tyrosine/chemistry
Czasopismo naukowe
Tytuł :
Visualization of two architectures in class-II CAP-dependent transcription activation.
Autorzy :
Shi W; Section of Transcription and Gene Regulation, The Hormel Institute, University of Minnesota, Austin, Minnesota, United States of America.
Jiang Y; Section of Cellular and Molecular Biology, The Hormel Institute, University of Minnesota, Austin, Minnesota, United States of America.; Department of Pathophysiology, School of Basic Medical Sciences, Zhengzhou University, Zhengzhou, P.R. China.
Deng Y; Section of Cell Death and Cancer Genetics, The Hormel Institute, University of Minnesota, Austin, Minnesota, United States of America.
Dong Z; Section of Cellular and Molecular Biology, The Hormel Institute, University of Minnesota, Austin, Minnesota, United States of America.
Liu B; Section of Transcription and Gene Regulation, The Hormel Institute, University of Minnesota, Austin, Minnesota, United States of America.
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Źródło :
PLoS biology [PLoS Biol] 2020 Apr 20; Vol. 18 (4), pp. e3000706. Date of Electronic Publication: 2020 Apr 20 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol. Subsets: MEDLINE
MeSH Terms :
Cyclic AMP Receptor Protein/*chemistry
Escherichia coli Proteins/*chemistry
Cryoelectron Microscopy ; Cyclic AMP Receptor Protein/metabolism ; DNA-Directed RNA Polymerases/chemistry ; DNA-Directed RNA Polymerases/metabolism ; Data Visualization ; Escherichia coli Proteins/metabolism ; Models, Molecular ; Multiprotein Complexes/chemistry ; Protein Conformation ; RNA/chemistry ; RNA/metabolism ; Sigma Factor/chemistry ; Sigma Factor/metabolism ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Crystal structure of an Escherichia coli Hfq Core (residues 2-69)-DNA complex reveals multifunctional nucleic acid binding sites.
Autorzy :
Orans J; Department of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Kovach AR; Department of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Hoff KE; Department of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Horstmann NM; Department of Infectious Diseases, Infection Control Research, University of Texas MD Anderson Cancer Center, Houston TX 77054, USA.
Brennan RG; Department of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Apr 17; Vol. 48 (7), pp. 3987-3997.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
DNA/*chemistry
Escherichia coli Proteins/*chemistry
Host Factor 1 Protein/*chemistry
Binding Sites ; Crystallography, X-Ray ; DNA/metabolism ; Escherichia coli Proteins/metabolism ; Host Factor 1 Protein/metabolism ; Models, Molecular ; Protein Binding ; RNA, Double-Stranded/chemistry ; RNA, Double-Stranded/metabolism ; RNA, Messenger/chemistry
Czasopismo naukowe
Tytuł :
Gating mechanism of elongating β-ketoacyl-ACP synthases.
Autorzy :
Mindrebo JT; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.; Jack H. Skirball Center for Chemical Biology and Proteomics, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
Patel A; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.
Kim WE; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.
Davis TD; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.
Chen A; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.
Bartholow TG; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.
La Clair JJ; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.; Jack H. Skirball Center for Chemical Biology and Proteomics, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA.
McCammon JA; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA.; Department of Pharmacology, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.
Noel JP; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA. .; Jack H. Skirball Center for Chemical Biology and Proteomics, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA. .; Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA, 92037, USA. .
Burkart MD; Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0358, USA. .
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Źródło :
Nature communications [Nat Commun] 2020 Apr 07; Vol. 11 (1), pp. 1727. Date of Electronic Publication: 2020 Apr 07.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
MeSH Terms :
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/*chemistry
Acetyltransferases/*chemistry
Escherichia coli/*chemistry
Escherichia coli Proteins/*chemistry
Fatty Acid Synthase, Type II/*chemistry
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/isolation & purification ; 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase/metabolism ; Acetyltransferases/metabolism ; Amino Acid Sequence/genetics ; Binding Sites/genetics ; Catalysis ; Catalytic Domain/genetics ; Crystallography, X-Ray ; Escherichia coli/enzymology ; Escherichia coli/metabolism ; Escherichia coli Proteins/metabolism ; Fatty Acid Synthase, Type II/metabolism ; Hydrogen Bonding ; Hydrophobic and Hydrophilic Interactions ; Models, Molecular ; Molecular Dynamics Simulation ; Mutagenesis ; Mutation ; Protein Conformation ; Recombinant Proteins
Czasopismo naukowe
Tytuł :
The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.
Autorzy :
Grau FC; Lehrstuhl für Biotechnik, Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Henkestr. 91, D-91052 Erlangen, Germany.
Jaeger J; Department of Biology, Technische Universität Darmstadt, Schnittspahnstrasse 10, D-64287 Darmstadt, Germany.
Groher F; Department of Biology, Technische Universität Darmstadt, Schnittspahnstrasse 10, D-64287 Darmstadt, Germany.
Suess B; Department of Biology, Technische Universität Darmstadt, Schnittspahnstrasse 10, D-64287 Darmstadt, Germany.; Centre for Synthetic Biology, Technische Universität Darmstadt.
Muller YA; Lehrstuhl für Biotechnik, Department of Biology, Friedrich-Alexander University Erlangen-Nuremberg, Henkestr. 91, D-91052 Erlangen, Germany.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Apr 06; Vol. 48 (6), pp. 3366-3378.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
Protein Conformation*
Aptamers, Nucleotide/*chemistry
DNA-Binding Proteins/*ultrastructure
Escherichia coli Proteins/*ultrastructure
Aptamers, Nucleotide/genetics ; Crystallography, X-Ray ; DNA, B-Form/chemistry ; DNA, B-Form/genetics ; DNA-Binding Proteins/chemistry ; DNA-Binding Proteins/genetics ; Escherichia coli/genetics ; Escherichia coli/ultrastructure ; Escherichia coli Proteins/chemistry ; Gene Expression Regulation/genetics ; Macromolecular Substances/chemistry ; Macromolecular Substances/ultrastructure ; Models, Molecular ; Protein Binding/genetics ; RNA/chemistry ; RNA/genetics
Czasopismo naukowe
Tytuł :
High prevalence of mcr-1 encoding colistin resistance and first identification of bla CTX-M-55 in ESBL/CMY-2-producing Escherichia coli isolated from chicken faeces and retail meat in Tunisia.
Autorzy :
Hassen B; Université de Tunis El Manar, Institut de la Recherche Vétérinaire de Tunisie, 20 rue Jebel Lakhdhar, Bab Saadoun, Tunis 1006, Tunisie.
Abbassi MS; Université de Tunis El Manar, Institut de la Recherche Vétérinaire de Tunisie, 20 rue Jebel Lakhdhar, Bab Saadoun, Tunis 1006, Tunisie; Université de Tunis El Manar, Faculté de Médecine de Tunis, Laboratoire de résistance aux antibiotiques LR99ES09, Tunisie.
Ruiz-Ripa L; Departamento de Agricultura y Alimentación, Universidad de La Rioja, 26006 Logroño, Spain.
Mama OM; Departamento de Agricultura y Alimentación, Universidad de La Rioja, 26006 Logroño, Spain.
Hassen A; Laboratoire de Traitement et de Valorisation des Rejets Hydriques, Centre des Recherches et des Technologies des Eaux (CERTE), Technopole Borj-Cédria, BP 273, 8020 Soliman, Tunisie.
Torres C; Departamento de Agricultura y Alimentación, Universidad de La Rioja, 26006 Logroño, Spain. Electronic address: .
Hammami S; Université la Manouba, IRESA, École Nationale de Médecine Vétérinaire de Sidi Thabet, Sidi Thabet 2020, Sidi Thabet, Ariana, Tunisie.
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Źródło :
International journal of food microbiology [Int J Food Microbiol] 2020 Apr 02; Vol. 318, pp. 108478. Date of Electronic Publication: 2019 Dec 16.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier Science Publishers Country of Publication: Netherlands NLM ID: 8412849 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-3460 (Electronic) Linking ISSN: 01681605 NLM ISO Abbreviation: Int. J. Food Microbiol. Subsets: MEDLINE
MeSH Terms :
Drug Resistance, Bacterial/*genetics
Escherichia coli/*genetics
Escherichia coli Proteins/*genetics
Poultry/*microbiology
beta-Lactamases/*genetics
Animals ; Anti-Bacterial Agents/pharmacology ; Chickens ; Drug Resistance, Bacterial/drug effects ; Escherichia coli/classification ; Escherichia coli/drug effects ; Escherichia coli/isolation & purification ; Escherichia coli Proteins/metabolism ; Feces/microbiology ; Phylogeny ; Prevalence ; Tunisia ; beta-Lactamases/metabolism
Czasopismo naukowe
Tytuł :
Role of DnaK-DnaJ Proteins in PSII Repair.
Autorzy :
Mukherjee A; University of Nebraska-Lincoln, Lincoln, Nebraska 68588 .
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Źródło :
Plant physiology [Plant Physiol] 2020 Apr; Vol. 182 (4), pp. 1804-1805.
Typ publikacji :
Journal Article; Comment
Journal Info :
Publisher: American Society of Plant Biologists Country of Publication: United States NLM ID: 0401224 Publication Model: Print Cited Medium: Internet ISSN: 1532-2548 (Electronic) Linking ISSN: 00320889 NLM ISO Abbreviation: Plant Physiol. Subsets: MEDLINE
MeSH Terms :
Escherichia coli Proteins*
HSP40 Heat-Shock Proteins*
Dehydration ; Desiccation ; Humans ; Molecular Chaperones
Czasopismo naukowe
Tytuł :
Dynamics of transcription-translation coordination tune bacterial indole signaling.
Autorzy :
Wang T; Key Laboratory of Industrial Biocatalysis, Ministry of Education; Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China. .; Tsinghua-Peking Center for Life Sciences, School of Medicine, Tsinghua University, Beijing, China. .
Zheng X; Key Laboratory of Industrial Biocatalysis, Ministry of Education; Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China.
Ji H; Key Laboratory of Industrial Biocatalysis, Ministry of Education; Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China.
Wang TL; School of Medicine, Tsinghua University, Beijing, China.
Xing XH; Key Laboratory of Industrial Biocatalysis, Ministry of Education; Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China.; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, China.
Zhang C; Key Laboratory of Industrial Biocatalysis, Ministry of Education; Institute of Biochemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing, China. .; Center for Synthetic and Systems Biology, Tsinghua University, Beijing, China. .
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Źródło :
Nature chemical biology [Nat Chem Biol] 2020 Apr; Vol. 16 (4), pp. 440-449. Date of Electronic Publication: 2019 Dec 23.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101231976 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1552-4469 (Electronic) Linking ISSN: 15524450 NLM ISO Abbreviation: Nat. Chem. Biol. Subsets: MEDLINE
MeSH Terms :
Escherichia coli Proteins/*metabolism
Indoles/*metabolism
Bacterial Proteins/metabolism ; Escherichia coli/metabolism ; Escherichia coli Proteins/genetics ; Gene Expression Regulation, Bacterial/physiology ; Protein Biosynthesis/drug effects ; Protein Sorting Signals ; Ribosomes/metabolism ; Signal Transduction/physiology ; Transcription, Genetic/drug effects ; Tryptophan/metabolism
Czasopismo naukowe
Tytuł :
FtsA G50E mutant suppresses the essential requirement for FtsK during bacterial cell division in Escherichia coli .
Autorzy :
Berezuk AM; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.
Roach EJ; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.
Seidel L; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.
Lo RY; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.
Khursigara CM; Department of Molecular and Cellular Biology, University of Guelph, 50 Stone Road East, Guelph, ON N1G 2W1, Canada.
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Źródło :
Canadian journal of microbiology [Can J Microbiol] 2020 Apr; Vol. 66 (4), pp. 313-327. Date of Electronic Publication: 2020 Jan 23.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Canadian Science Publishing Country of Publication: Canada NLM ID: 0372707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1480-3275 (Electronic) Linking ISSN: 00084166 NLM ISO Abbreviation: Can. J. Microbiol. Subsets: MEDLINE
MeSH Terms :
Cell Division*
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Membrane Proteins/*metabolism
Escherichia coli/cytology ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Gene Expression Regulation, Bacterial ; Membrane Proteins/genetics ; Mutagenesis ; Mutation, Missense ; Protein Binding
Czasopismo naukowe
Tytuł :
Alteration of Transcriptional Regulator Rob In Vivo : Enhancement of Promoter DNA Binding and Antibiotic Resistance in the Presence of Nucleobase Amino Acids.
Autorzy :
Zhang C; Biodesign Center for BioEnergetics and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Chen S; Biodesign Center for BioEnergetics and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Bai X; Biodesign Center for BioEnergetics and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Dedkova LM; Biodesign Center for BioEnergetics and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Hecht SM; Biodesign Center for BioEnergetics and School of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
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Źródło :
Biochemistry [Biochemistry] 2020 Mar 31; Vol. 59 (12), pp. 1217-1220. Date of Electronic Publication: 2020 Mar 17.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
Journal Info :
Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370623 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-4995 (Electronic) Linking ISSN: 00062960 NLM ISO Abbreviation: Biochemistry Subsets: MEDLINE
MeSH Terms :
Amino Acids/*chemistry
DNA-Binding Proteins/*metabolism
Drug Resistance, Multiple, Bacterial/*genetics
Escherichia coli/*genetics
Escherichia coli Proteins/*metabolism
Transcription Factors/*metabolism
Ampicillin/pharmacology ; Clarithromycin/pharmacology ; Crystallography, X-Ray ; DNA, Bacterial/genetics ; DNA, Bacterial/metabolism ; DNA-Binding Proteins/chemistry ; Escherichia coli/drug effects ; Escherichia coli Proteins/chemistry ; Gene Expression Regulation, Bacterial ; Guanine/chemistry ; Microbial Sensitivity Tests ; Promoter Regions, Genetic/genetics ; RNA, Small Interfering/genetics ; Roxithromycin/pharmacology ; Transcription Factors/chemistry
Czasopismo naukowe
Tytuł :
The Tol-Pal system is required for peptidoglycan-cleaving enzymes to complete bacterial cell division.
Autorzy :
Yakhnina AA; Department of Microbiology, Harvard Medical School, Boston, MA 02115.
Bernhardt TG; Department of Microbiology, Harvard Medical School, Boston, MA 02115; .; Howard Hughes Medical Institute, Boston, MA 02115.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Mar 24; Vol. 117 (12), pp. 6777-6783. Date of Electronic Publication: 2020 Mar 09.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc. Natl. Acad. Sci. U.S.A. Subsets: MEDLINE
MeSH Terms :
Cell Division*
Bacterial Outer Membrane Proteins/*metabolism
Cell Wall/*metabolism
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Lipoproteins/*metabolism
Peptidoglycan/*metabolism
Bacterial Outer Membrane Proteins/genetics ; Cell Membrane/metabolism ; Escherichia coli/genetics ; Escherichia coli/growth & development ; Escherichia coli Proteins/genetics ; Lipoproteins/genetics ; Protein Binding
Czasopismo naukowe
Tytuł :
Single-molecule imaging reveals molecular coupling between transcription and DNA repair machinery in live cells.
Autorzy :
Ho HN; Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, NSW, 2522, Australia.; Illawarra Health and Medical Research Institute, Wollongong, NSW, 2522, Australia.
van Oijen AM; Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, NSW, 2522, Australia.; Illawarra Health and Medical Research Institute, Wollongong, NSW, 2522, Australia.
Ghodke H; Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Wollongong, NSW, 2522, Australia. .; Illawarra Health and Medical Research Institute, Wollongong, NSW, 2522, Australia. .
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Źródło :
Nature communications [Nat Commun] 2020 Mar 20; Vol. 11 (1), pp. 1478. Date of Electronic Publication: 2020 Mar 20.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
MeSH Terms :
DNA Repair/*physiology
DNA Repair Enzymes/*metabolism
Escherichia coli/*metabolism
Escherichia coli Proteins/*metabolism
Single Molecule Imaging/*methods
Transcription Factors/*metabolism
Adenosine Triphosphatases ; Bacterial Proteins ; Bacterial Proton-Translocating ATPases ; DNA Helicases/genetics ; DNA Helicases/metabolism ; DNA-Binding Proteins ; DNA-Directed RNA Polymerases/metabolism ; Escherichia coli/enzymology ; Escherichia coli/genetics ; Escherichia coli Proteins/genetics ; Gene Expression Regulation, Bacterial ; Models, Molecular ; Multienzyme Complexes/metabolism ; Protein Conformation ; Zinc Fingers/genetics ; Zinc Fingers/physiology
Czasopismo naukowe
Tytuł :
Biphasic unbinding of a metalloregulator from DNA for transcription (de)repression in Live Bacteria.
Autorzy :
Jung W; Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.
Sengupta K; Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.
Wendel BM; Department of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Helmann JD; Department of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Chen P; Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Mar 18; Vol. 48 (5), pp. 2199-2208.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res. Subsets: MEDLINE
MeSH Terms :
Gene Expression Regulation, Bacterial*
Transcription, Genetic*
DNA, Bacterial/*genetics
DNA-Binding Proteins/*genetics
Escherichia coli/*genetics
Escherichia coli Proteins/*genetics
Binding Sites ; Chromosomes, Bacterial/chemistry ; Chromosomes, Bacterial/metabolism ; DNA, Bacterial/metabolism ; DNA-Binding Proteins/metabolism ; Escherichia coli/metabolism ; Escherichia coli Proteins/metabolism ; Kinetics ; Protein Binding ; Protein Multimerization ; Single-Cell Analysis ; Zinc/metabolism
Czasopismo naukowe

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