Subject Terms: "FlowSom" - OpacWWW

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Title:: Cyclone: an accessible pipeline to analyze, evaluate, and optimize multiparametric cytometry data
Authors:: Ravi K. Patel
Rebecca G. Jaszczak
Kwok Im
Nicholas D. Carey
Tristan Courau
Daniel G. Bunis
Bushra Samad
Lia Avanesyan
Nayvin W. Chew
Sarah Stenske
Jillian M. Jespersen
Jean Publicover
Austin W. Edwards
Mohammad Naser
Arjun A. Rao
Leonard Lupin-Jimenez
Matthew F. Krummel
Stewart Cooper
Jody L. Baron
Alexis J. Combes
Gabriela K. Fragiadakis; Show more
Subject Terms:: cyclone
CyTOF
spectral flow cytometry
spatial expression data
multi-parametric analysis
FlowSOM
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 14 (2023)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/articles/10.3389/fimmu.2023.1167241/full; https://doaj.org/toc/1664-3224
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Title:: CD161 expression defines new human γδ T cell subsets
Authors:: Karunathilaka, Amali
Halstrom, Samuel
Price, Patricia
Holt, MichaelAff3, Aff4
Lutzky, Viviana P.
Doolan, Denise L.Aff6, Aff7
Kupz, AndreasAff6, Aff7
Bell, Scott C.Aff3, Aff5
Thomson, Rachel M.Aff4, Aff8
Miles, John J.Aff5, Aff6, Aff7, Aff8, Aff9, IDs1297902200269w_cor10
Ratnatunga, Champa N.Aff1, Aff5, Aff6, Aff8, IDs1297902200269w_cor11; Show more
Source:: Immunity & Ageing. 19(1)

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Title:: Alterations of NK Cell Phenotype During Pregnancy in Multiple Sclerosis
Authors:: Anne Wisgalla
Caren Ramien
Mathias Streitz
Stephan Schlickeiser
Andreea-Roxana Lupu
Anke Diemert
Eva Tolosa
Petra C. Arck
Judith Bellmann-Strobl
Nadja Siebert
Christoph Heesen
Friedemann Paul
Manuel A. Friese
Carmen Infante-Duarte
Stefan M. Gold; Show more
Subject Terms:: natural killer cells
multiple sclerosis
pregnancy
immune tolerance
immune profiling
FlowSOM clustering
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 13 (2022)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/articles/10.3389/fimmu.2022.907994/full; https://doaj.org/toc/1664-3224
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Title:: Mass Cytometry Study on Hepatic Fibrosis and Its Drug-Induced Recovery Using Mouse Peripheral Blood Mononuclear Cells
Authors:: Jiwon Bae
Ji Eun Kim
Haribalan Perumalsamy
Sehee Park
Yun Kim
Dae Won Jun
Tae Hyun Yoon; Show more
Subject Terms:: liver fibrosis
mass cytometry
deep immune profiling
thioacetamide
PhenoGraph
FlowSOM
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 13 (2022)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/articles/10.3389/fimmu.2022.814030/full; https://doaj.org/toc/1664-3224
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Title:: T lymphocyte and monocyte subsets are dysregulated in type 1 diabetes patients with peripheral neuropathic pain
Authors:: Jayden A. O'Brien
Helen M. McGuire
Diana Shinko
Barbara Fazekas de St Groth
Marc A. Russo
Dominic Bailey
Danielle M. Santarelli
Katie Wynne
Paul J. Austin; Show more
Subject Terms:: CD27
Chronic pain
Diabetic neuropathy
FlowSOM
Immunophenotyping
MAPKAPK2
Neurosciences. Biological psychiatry. Neuropsychiatry
RC321-571
Source:: Brain, Behavior, & Immunity - Health, Vol 15, Iss , Pp 100283- (2021)
File Description:: electronic resource
Relation:: http://www.sciencedirect.com/science/article/pii/S2666354621000867; https://doaj.org/toc/2666-3546
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Title:: Sensing Acute Cellular Rejection in Liver Transplant Patients Using Liver-Derived Extracellular Particles: A Prospective, Observational Study
Authors:: Kaan Kamali
Moritz Schmelzle
Can Kamali
Philipp Brunnbauer
Katrin Splith
Annekatrin Leder
Nadja Berndt
Karl-Herbert Hillebrandt
Nathanael Raschzok
Linda Feldbrügge
Matthäus Felsenstein
Joseph Gaßner
Paul Ritschl
Georg Lurje
Wenzel Schöning
Christian Benzing
Johann Pratschke
Felix Krenzien; Show more
Subject Terms:: acute cellular liver transplant rejection
extracellular particles (EP)
FlowSOM
liver transplantation
liquid biopsy
t-SNE (t-Distributed Stochastic Neighbor Embedding)
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 12 (2021)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/articles/10.3389/fimmu.2021.647900/full; https://doaj.org/toc/1664-3224
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Title:: Mass Cytometry Discovers Two Discrete Subsets of CD39−Treg Which Discriminate MGUS From Multiple Myeloma
Authors:: Felix Marsh-Wakefield
Annabel Kruzins
Helen M. McGuire
Shihong Yang
Christian Bryant
Barbara Fazekas de St. Groth
Najah Nassif
Scott N. Byrne
John Gibson
Christina Brown
Stephen Larsen
Derek McCulloch
Richard Boyle
Georgina Clark
Douglas Joshua
Phoebe Joy Ho
Slavica Vuckovic; Show more
Subject Terms:: MGUS
multiple myeloma
mass cytometry
FlowSom
Treg
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 10 (2019)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/article/10.3389/fimmu.2019.01596/full; https://doaj.org/toc/1664-3224
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Title:: A Computational Pipeline for the Diagnosis of CVID Patients
Authors:: Annelies Emmaneel
Delfien J. Bogaert
Sofie Van Gassen
Simon J. Tavernier
Melissa Dullaers
Filomeen Haerynck
Yvan Saeys; Show more
Subject Terms:: CVID
flow cytometry
FlowSOM
computational pipeline
PAD
Immunologic diseases. Allergy
RC581-607
Source:: Frontiers in Immunology, Vol 10 (2019)
File Description:: electronic resource
Relation:: https://www.frontiersin.org/article/10.3389/fimmu.2019.02009/full; https://doaj.org/toc/1664-3224
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Title:: Unsupervised Flow Cytometry Analysis Allows for an Accurate Identification of Minimal Residual Disease Assessment in Acute Myeloid Leukemia
Authors:: Jean Philippe Vial
Nicolas Lechevalier
Francis Lacombe
Pierre-Yves Dumas
Audrey Bidet
Thibaut Leguay
François Vergez
Arnaud Pigneux
Marie C. Béné; Show more
Subject Terms:: acute myeloid leukemia
molecular markers
multiparameter flow cytometry
minimal/measurable residual disease
unsupervised analysis
FlowSOM
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
RC254-282
Source:: Cancers, Vol 13, Iss 629, p 629 (2021)
File Description:: electronic resource
Relation:: https://www.mdpi.com/2072-6694/13/4/629; https://doaj.org/toc/2072-6694
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