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Wyszukujesz frazę ""Gene Expression"" wg kryterium: Temat


Tytuł:
Single-cell RNA-seq and single-cell bisulfite-sequencing reveal insights into yak preimplantation embryogenesis.
Autorzy:
Yu T; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Zhang C; Academician Zhang Yong Innovation Center, Xining Animal Disease Control Center, Xining, Qinghai, China.
Song W; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Zhao X; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Cheng Y; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China.
Liu J; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China. Electronic address: .
Su J; Key Laboratory of Animal Biotechnology of the Ministry of Agriculture, College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China. Electronic address: .
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Źródło:
The Journal of biological chemistry [J Biol Chem] 2024 Jan; Vol. 300 (1), pp. 105562. Date of Electronic Publication: 2023 Dec 13.
Typ publikacji:
Journal Article
MeSH Terms:
Blastocyst*/metabolism
DNA Methylation*
Embryonic Development*/genetics
Gene Expression Regulation, Developmental*
Single-Cell Gene Expression Analysis*
Sulfites*/metabolism
Embryo, Mammalian*/embryology
Embryo, Mammalian*/enzymology
Animals ; Cattle ; Female ; Pregnancy ; Epigenesis, Genetic ; Gene Expression Profiling ; Histone Deacetylase 1/metabolism ; Histone Deacetylase 2/metabolism ; Ubiquitin-Specific Peptidase 7/metabolism
Czasopismo naukowe
Tytuł:
Reliable reference gene selection for quantitative real-time PCR (qRT-PCR) in floral developmental phases of dioecious species Coccinia grandis.
Autorzy:
Naseema Rasheed R; Department of Botany, University of Kerala, Kariavattom Campus, Kerala, India. Electronic address: .
Suhara Beevy S; Department of Botany, University of Kerala, Kariavattom Campus, Kerala, India.
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Źródło:
Gene [Gene] 2024 Mar 30; Vol. 900, pp. 148143. Date of Electronic Publication: 2024 Jan 07.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation, Plant*
Cucurbitaceae*/genetics
Real-Time Polymerase Chain Reaction ; Reproducibility of Results ; Flowers/genetics ; Gene Expression Profiling ; Reference Standards
Czasopismo naukowe
Tytuł:
A Data-Distribution and Successive Spline Points based discretization approach for evolving gene regulatory networks from scRNA-Seq time-series data using Cartesian Genetic Programming.
Autorzy:
da Silva JEH; Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil. Electronic address: .
de Carvalho PC; Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil. Electronic address: .
Camata JJ; Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil. Electronic address: .
de Oliveira IL; Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil. Electronic address: .
Bernardino HS; Universidade Federal de Juiz de Fora, Juiz de Fora, MG, Brazil. Electronic address: .
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Źródło:
Bio Systems [Biosystems] 2024 Feb; Vol. 236, pp. 105126. Date of Electronic Publication: 2024 Jan 24.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*/genetics
Single-Cell Gene Expression Analysis*
Tosyl Compounds*
Algorithms ; Systems Biology ; Gene Expression Profiling/methods
Czasopismo naukowe
Tytuł:
Mapping Expression Quantitative Trait Loci Targeting Candidate Genes for Pregnancy in Beef Cows.
Autorzy:
Diniz WJS; Department of Animal Sciences, Auburn University, Auburn, AL 36849, USA.
Afonso J; Embrapa Pecuária Sudeste, Rodovia Washington Luiz, Km 234, s/n, Fazenda Canchim, São Carlos 13560-970, SP, Brazil.
Kertz NC; Department of Animal Sciences, Auburn University, Auburn, AL 36849, USA.
Dyce PW; Department of Animal Sciences, Auburn University, Auburn, AL 36849, USA.
Banerjee P; Department of Animal Sciences, Auburn University, Auburn, AL 36849, USA.
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Źródło:
Biomolecules [Biomolecules] 2024 Jan 26; Vol. 14 (2). Date of Electronic Publication: 2024 Jan 26.
Typ publikacji:
Journal Article
MeSH Terms:
Quantitative Trait Loci*
Gene Expression Regulation*
Female ; Cattle ; Animals ; Pregnancy ; Gene Expression Profiling ; Phenotype ; RNA-Seq ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
Validation of Endogenous Control Genes by Real-Time Quantitative Reverse Transcriptase Polymerase Chain Reaction for Acute Leukemia Gene Expression Studies.
Autorzy:
Pessoa FMCP; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.
Viana VBJ; Department of Biological Sciences, Oncology Research Center, Federal University of Pará, Belém 66073-005, PA, Brazil.
de Oliveira MB; Department of Biological Sciences, Oncology Research Center, Federal University of Pará, Belém 66073-005, PA, Brazil.
Nogueira BMD; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.
Ribeiro RM; Department of Hematology, Fortaleza General Hospital (HGF), Fortaleza 60150-160, CE, Brazil.
Oliveira DS; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.; Department of Hematology, Fortaleza General Hospital (HGF), Fortaleza 60150-160, CE, Brazil.
Lopes GS; Department of Hematology, César Cals General Hospital, Fortaleza 60015-152, CE, Brazil.
Vieira RPG; Department of Hematology, São Vicente de Paulo Maternity Hospital, Barbalha 63180-000, CE, Brazil.
de Moraes Filho MO; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.
de Moraes MEA; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.
Khayat AS; Department of Biological Sciences, Oncology Research Center, Federal University of Pará, Belém 66073-005, PA, Brazil.
Moreira FC; Department of Biological Sciences, Oncology Research Center, Federal University of Pará, Belém 66073-005, PA, Brazil.
Moreira-Nunes CA; Department of Medicine, Pharmacogenetics Laboratory, Drug Research and Development Center (NPDM), Federal University of Ceará, Fortaleza 60430-275, CE, Brazil.; Department of Biological Sciences, Oncology Research Center, Federal University of Pará, Belém 66073-005, PA, Brazil.; Central Unity, Molecular Biology Laboratory, Clementino Fraga Group, Fortaleza 60115-170, CE, Brazil.
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Źródło:
Genes [Genes (Basel)] 2024 Jan 24; Vol. 15 (2). Date of Electronic Publication: 2024 Jan 24.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*
Leukemia*/genetics
Mice ; Animals ; Humans ; Reverse Transcriptase Polymerase Chain Reaction ; Genes, Essential ; Glyceraldehyde-3-Phosphate Dehydrogenases/genetics ; Acute Disease ; Gene Expression
Czasopismo naukowe
Tytuł:
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes.
Autorzy:
Fisher JL; Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, AL, USA.
Clark AD; Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, AL, USA.
Jones EF; Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, AL, USA.
Lasseigne BN; Department of Cell, Developmental and Integrative Biology, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, AL, USA. .
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Źródło:
BMC pharmacology & toxicology [BMC Pharmacol Toxicol] 2024 Jan 02; Vol. 25 (1), pp. 5. Date of Electronic Publication: 2024 Jan 02.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation*
Liver*/metabolism
Humans ; Male ; Female ; Pharmacovigilance ; Gene Expression
Czasopismo naukowe
Tytuł:
De novo transcriptomic analysis of Doum Palm (Hyphaene compressa) revealed an insight into its potential drought tolerance.
Autorzy:
Borlay AJ; Department of Biological Sciences, University of Liberia, Monrovia, Liberia.; Department of Molecular Biology and Biotechnology, Pan African University Institute for Basic Sciences, Technology and Innovation, Nairobi, Kenya.
Mweu CM; Institute for Biotechnology Research, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
Nyanjom SG; Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
Omolo KM; Department of Biochemistry, Jomo Kenyatta University of Agriculture and Technology, Nairobi, Kenya.
Naitchede LHS; Department of Molecular Biology and Biotechnology, Pan African University Institute for Basic Sciences, Technology and Innovation, Nairobi, Kenya.
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Źródło:
PloS one [PLoS One] 2024 Mar 12; Vol. 19 (3), pp. e0292543. Date of Electronic Publication: 2024 Mar 12 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Drought Resistance*
Gene Expression Profiling*
Humans ; Transcriptome ; Droughts ; Signal Transduction ; Gene Expression Regulation, Plant ; Stress, Physiological/genetics
Czasopismo naukowe
Tytuł:
scFSNN: a feature selection method based on neural network for single-cell RNA-seq data.
Autorzy:
Peng M; School of Mathematical Sciences, Shenzhen University, Nanshan, Shenzhen, 518060, Guangdong, China.; School of Mathematics and Statistics and KLAS, Northeast Normal University, Renmin Street, Changchun, 130000, Jilin, China.
Lin B; Experimental Center, The First Affiliated Hospital of Guangzhou University of Chinese Medicine, Guangzhou, Guangdong, 510405, China.
Zhang J; School of Mathematical Sciences, Shenzhen University, Nanshan, Shenzhen, 518060, Guangdong, China.
Zhou Y; School of Mathematical Sciences, Shenzhen University, Nanshan, Shenzhen, 518060, Guangdong, China.
Lin B; School of Mathematical Sciences, Shenzhen University, Nanshan, Shenzhen, 518060, Guangdong, China. .
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Źródło:
BMC genomics [BMC Genomics] 2024 Mar 08; Vol. 25 (1), pp. 264. Date of Electronic Publication: 2024 Mar 08.
Typ publikacji:
Journal Article
MeSH Terms:
Single-Cell Gene Expression Analysis*
Neural Networks, Computer*
Computer Simulation ; Single-Cell Analysis/methods ; Sequence Analysis, RNA/methods ; Gene Expression Profiling/methods ; Cluster Analysis
Czasopismo naukowe
Tytuł:
Improving gene set enrichment analysis (GSEA) by using regulation directionality.
Autorzy:
Wang B; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
van der Kloet F; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
Kes MBMJ; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.
Luirink J; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.
Hamoen LW; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
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Źródło:
Microbiology spectrum [Microbiol Spectr] 2024 Mar 05; Vol. 12 (3), pp. e0345623. Date of Electronic Publication: 2024 Jan 31.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*
Transcriptome*
Transcription Factors ; Software ; Operon ; Gene Expression Regulation, Bacterial
Czasopismo naukowe
Tytuł:
Validation of RNA Extraction Methods and Suitable Reference Genes for Gene Expression Studies in Developing Fetal Human Inner Ear Tissue.
Autorzy:
Steinacher C; Department of Otorhinolaryngology, Medical University Innsbruck, 6020 Innsbruck, Austria.
Rieder D; Institute of Bioinformatics, Medical University Innsbruck, 6020 Innsbruck, Austria.
Turner JE; Biosciences Institute, Newcastle University, Newcastle upon Tyne NE1 4EP, UK.
Solanky N; UCL Great Ormond Street Institute of Child Health, University College London, London WC1N 1EH, UK.
Nishio SY; Department of Hearing Implant Sciences, Shinshu University School of Medicine, Matsumoto 3-1-1 Asahi, Nagano 390-8621, Japan.
Usami SI; Department of Hearing Implant Sciences, Shinshu University School of Medicine, Matsumoto 3-1-1 Asahi, Nagano 390-8621, Japan.
Hausott B; Institute of Neuroanatomy, Medical University Innsbruck, 6020 Innsbruck, Austria.
Schrott-Fischer A; Department of Otorhinolaryngology, Medical University Innsbruck, 6020 Innsbruck, Austria.
Dudas J; Department of Otorhinolaryngology, Medical University Innsbruck, 6020 Innsbruck, Austria.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Mar 02; Vol. 25 (5). Date of Electronic Publication: 2024 Mar 02.
Typ publikacji:
Journal Article
MeSH Terms:
RNA*
Gene Expression Profiling*/methods
Humans ; Glyceraldehyde-3-Phosphate Dehydrogenases/genetics ; Gene Expression ; Real-Time Polymerase Chain Reaction
Czasopismo naukowe
Tytuł:
Building flexible and robust analysis frameworks for molecular subtyping of cancers.
Autorzy:
Pedersen CB; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.; Center for Genomic Medicine, Rigshospitalet - Copenhagen University Hospital, Denmark.
Campos B; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Rene L; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Wegener HS; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Krishnan NM; School of Biotechnology, Jawaharlal Nehru University, New Delhi, India.
Panda B; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.; School of Biotechnology, Jawaharlal Nehru University, New Delhi, India.; Special Centre for Systems Medicine, Jawaharlal Nehru University, New Delhi, India.
Vitting-Seerup K; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
Rossing M; Center for Genomic Medicine, Rigshospitalet - Copenhagen University Hospital, Denmark.
Bagger FO; Center for Genomic Medicine, Rigshospitalet - Copenhagen University Hospital, Denmark.
Olsen LR; Department of Health Technology, Technical University of Denmark, Kongens Lyngby, Denmark.
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Źródło:
Molecular oncology [Mol Oncol] 2024 Mar; Vol. 18 (3), pp. 606-619. Date of Electronic Publication: 2024 Jan 07.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*/methods
Breast Neoplasms*/diagnosis
Breast Neoplasms*/genetics
Humans ; Female ; RNA ; Computational Biology/methods ; Gene Expression Regulation, Neoplastic
Czasopismo naukowe
Tytuł:
Comprehensive scRNA-seq Model Reveals Artery Endothelial Cell Heterogeneity and Metabolic Preference in Human Vascular Disease.
Autorzy:
Zeng L; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.
Liu Y; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.
Li X; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.
Gong X; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.; Department of Cardiology, The Sixth Medical Centre, Chinese PLA General Hospital, Beijing, People's Republic of China.
Tian M; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.
Yang P; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.
Cai Q; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China.; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China.; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China.; Department of Cardiology, Fujian Heart Center, Provincial Institute of Coronary Disease, Fujian Medical University Union Hospital, Fuzhou, Fujian, People's Republic of China.
Wu G; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China. .; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China. .; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China. .
Zeng C; Department of Cardiology, Daping Hospital, The Third Military Medical University (Army Medical University), Chongqing, People's Republic of China. .; Key Laboratory of Geriatric Cardiovascular and Cerebrovascular Disease (Army Medical University), Ministry of Education, Beijing, People's Republic of China. .; Chongqing Key Laboratory for Hypertension Research, Chongqing Cardiovascular Clinical Research Center, Chongqing Institute of Cardiology, Chongqing, People's Republic of China. .
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Źródło:
Interdisciplinary sciences, computational life sciences [Interdiscip Sci] 2024 Mar; Vol. 16 (1), pp. 104-122. Date of Electronic Publication: 2023 Nov 17.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*
Vascular Diseases*
Humans ; Endothelial Cells ; Sequence Analysis, RNA ; Single-Cell Gene Expression Analysis ; Algorithms ; Arteries ; Cluster Analysis
Czasopismo naukowe
Tytuł:
Combining Global-Constrained Concept Factorization and a Regularized Gaussian Graphical Model for Clustering Single-Cell RNA-seq Data.
Autorzy:
Xu Y; School of Sciences, East China Jiaotong University, Nanchang, 330013, China.
Zhang W; School of Sciences, East China Jiaotong University, Nanchang, 330013, China. wzhang_.
Zheng X; Operations Research and Planning Department, Naval University of Engineering, Wuhan, 430033, China.
Cai X; School of Sciences, East China Jiaotong University, Nanchang, 330013, China.
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Źródło:
Interdisciplinary sciences, computational life sciences [Interdiscip Sci] 2024 Mar; Vol. 16 (1), pp. 1-15. Date of Electronic Publication: 2023 Oct 10.
Typ publikacji:
Journal Article
MeSH Terms:
Single-Cell Gene Expression Analysis*
Single-Cell Analysis*/methods
Sequence Analysis, RNA/methods ; Gene Expression Profiling/methods ; Algorithms ; Cluster Analysis
Czasopismo naukowe
Tytuł:
PEO: Plant Expression Omnibus - a comparative transcriptomic database for 103 Archaeplastida.
Autorzy:
Koh E; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Goh W; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Julca I; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Villanueva E; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
Mutwil M; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.
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Źródło:
The Plant journal : for cell and molecular biology [Plant J] 2024 Mar; Vol. 117 (5), pp. 1592-1603. Date of Electronic Publication: 2023 Dec 04.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*
Arabidopsis*/genetics
Transcriptome/genetics ; Plants/genetics ; Plants/metabolism ; Databases, Factual ; RNA-Seq ; Gene Expression Regulation, Plant/genetics
Czasopismo naukowe
Tytuł:
Quantifying the clusterness and trajectoriness of single-cell RNA-seq data.
Autorzy:
Lim HS; Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia, United States of America.
Qiu P; Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia, United States of America.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2024 Feb 28; Vol. 20 (2), pp. e1011866. Date of Electronic Publication: 2024 Feb 28 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Single-Cell Gene Expression Analysis*
Single-Cell Analysis*
Sequence Analysis, RNA ; Algorithms ; Cluster Analysis ; Gene Expression Profiling
Czasopismo naukowe
Tytuł:
A novel batch-effect correction method for scRNA-seq data based on Adversarial Information Factorization.
Autorzy:
Monnier L; Paris-Saclay University, CentraleSupélec, Laboratory of Mathematics and Computer Science (MICS), Gif-sur-Yvette, France.
Cournède PH; Paris-Saclay University, CentraleSupélec, Laboratory of Mathematics and Computer Science (MICS), Gif-sur-Yvette, France.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2024 Feb 22; Vol. 20 (2), pp. e1011880. Date of Electronic Publication: 2024 Feb 22 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Single-Cell Gene Expression Analysis*
Single-Cell Analysis*/methods
Humans ; Cluster Analysis ; Exome Sequencing ; Benchmarking ; Sequence Analysis, RNA/methods ; Gene Expression Profiling ; Algorithms
Czasopismo naukowe
Tytuł:
Chemical and Transcriptomic Analyses of Leaf Cuticular Wax Metabolism in Ammopiptanthus mongolicus under Osmotic Stress.
Autorzy:
Sumbur B; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Zhou M; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Dorjee T; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Bing J; College of Life Sciences, Beijing Normal University, Beijing 100080, China.
Ha S; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Xu X; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Zhou Y; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
Gao F; Key Laboratory of Mass Spectrometry Imaging and Metabolomics, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; Key Laboratory of Ecology and Environment in Minority Areas, Minzu University of China, National Ethnic Affairs Commission, Beijing 100081, China.; College of Life and Environmental Sciences, Minzu University of China, Beijing 100081, China.
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Źródło:
Biomolecules [Biomolecules] 2024 Feb 16; Vol. 14 (2). Date of Electronic Publication: 2024 Feb 16.
Typ publikacji:
Journal Article
MeSH Terms:
Plant Leaves*/chemistry
Gene Expression Profiling*
Osmotic Pressure ; Water/metabolism ; Alkanes ; Gene Expression Regulation, Plant
Czasopismo naukowe
Tytuł:
Transcriptomic and Metabolic Profiling Reveal the Mechanism of Ovule Development in Castanea mollissima .
Autorzy:
Cui Y; College of Forestry, Beijing Forestry University, Beijing 100083, China.; State Key Laboratory of Efficient Production of Forest Resources, Beijing 100083, China.
Ji X; College of Forestry, Beijing Forestry University, Beijing 100083, China.; State Key Laboratory of Efficient Production of Forest Resources, Beijing 100083, China.
Zhang Y; College of Forestry, Beijing Forestry University, Beijing 100083, China.; State Key Laboratory of Efficient Production of Forest Resources, Beijing 100083, China.
Liu Y; Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Plant Science and Technology, Beijing University of Agriculture, Beijing 102206, China.
Bai Q; College of Forestry, Beijing Forestry University, Beijing 100083, China.; State Key Laboratory of Efficient Production of Forest Resources, Beijing 100083, China.
Su S; College of Forestry, Beijing Forestry University, Beijing 100083, China.; State Key Laboratory of Efficient Production of Forest Resources, Beijing 100083, China.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2024 Feb 06; Vol. 25 (4). Date of Electronic Publication: 2024 Feb 06.
Typ publikacji:
Journal Article
MeSH Terms:
Ovule*/metabolism
Gene Expression Profiling*
Ethylenes/metabolism ; Hormones/metabolism ; Sucrose/metabolism ; Gene Expression Regulation, Plant
Czasopismo naukowe
Tytuł:
Logical design of synthetic cis-regulatory DNA for genetic tracing of cell identities and state changes.
Autorzy:
Company C; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Schmitt MJ; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Dramaretska Y; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Serresi M; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Kertalli S; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Jiang B; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany.
Yin JA; Institute of Neuropathology, University Hospital Zurich, University of Zurich, 8091, Zurich, Switzerland.
Aguzzi A; Institute of Neuropathology, University Hospital Zurich, University of Zurich, 8091, Zurich, Switzerland.
Barozzi I; Center for Cancer Research, Medical University of Vienna, Borschkegasse 8a, 1090, Vienna, Austria.; Department of Surgery and Cancer, Imperial College London, London, UK.
Gargiulo G; Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Robert-Rössle-Str. 10, 13092, Berlin, Germany. .
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Źródło:
Nature communications [Nat Commun] 2024 Feb 05; Vol. 15 (1), pp. 897. Date of Electronic Publication: 2024 Feb 05.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*
DNA*
Animals ; Humans ; Mice ; Promoter Regions, Genetic/genetics ; Gene Expression ; Biomarkers
Czasopismo naukowe
Tytuł:
Tissue-specific and cis-regulatory changes underlie parallel, adaptive gene expression evolution in house mice.
Autorzy:
Durkin SM; Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Ballinger MA; Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
Nachman MW; Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, Berkeley, California, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2024 Feb 02; Vol. 20 (2), pp. e1010892. Date of Electronic Publication: 2024 Feb 02 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*/genetics
Evolution, Molecular*
Animals ; Mice ; Phenotype ; Body Size ; Gene Expression/genetics
Czasopismo naukowe

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