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Tytuł:
Kruppel-like factor 13 acts as a tumor suppressor in thyroid carcinoma by downregulating IFIT1.
Autorzy:
Liu Y; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
Song Y; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
He Y; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
Kong Z; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
Li H; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
Zhu Y; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China.
Liu S; Department of Head and Neck Surgical Oncology, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, No. 17, Panjiayuan Nanli, Chaoyang District, Beijing, 100021, People's Republic of China. .
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Źródło:
Biology direct [Biol Direct] 2023 Oct 10; Vol. 18 (1), pp. 65. Date of Electronic Publication: 2023 Oct 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation*
Thyroid Neoplasms*/genetics
Thyroid Neoplasms*/pathology
Humans ; Adaptor Proteins, Signal Transducing/genetics ; Adaptor Proteins, Signal Transducing/metabolism ; Cell Line ; Cell Line, Tumor ; Cell Proliferation/genetics ; Gene Expression Regulation, Neoplastic ; Kruppel-Like Transcription Factors/genetics ; Kruppel-Like Transcription Factors/metabolism ; Luciferases/genetics ; Luciferases/metabolism ; RNA-Binding Proteins/genetics ; RNA-Binding Proteins/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
When to branch: seasonal control of shoot architecture in trees.
Autorzy:
Singh RK; Department of Biotechnology, CSIR-Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh, India.
Bhalerao RP; Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden.
Maurya JP; Department of Botany, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh, India.
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Źródło:
The FEBS journal [FEBS J] 2022 Dec; Vol. 289 (24), pp. 8062-8070. Date of Electronic Publication: 2021 Oct 28.
Typ publikacji:
Review; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Trees*/genetics
Gene Expression Regulation*
Seasons ; Flowers/genetics ; Flowers/metabolism ; Temperature ; Gene Expression Regulation, Plant
Czasopismo naukowe
Szczegóły
Tytuł:
Optimal transcriptional regulation of dynamic bacterial responses to sudden drug exposures.
Autorzy:
Schultz D; Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire. Electronic address: .
Stevanovic M; Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire.
Tsimring LS; Synthetic Biology Institute, University of California, San Diego, La Jolla, California.
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Źródło:
Biophysical journal [Biophys J] 2022 Nov 01; Vol. 121 (21), pp. 4137-4152. Date of Electronic Publication: 2022 Sep 26.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms:
Gene Expression Regulation*
Transcription Factors*/genetics
Transcription Factors*/metabolism
Binding Sites ; Promoter Regions, Genetic ; Bacteria/genetics ; Gene Expression Regulation, Bacterial
Czasopismo naukowe
Szczegóły
Tytuł:
Taf1 N-terminal domain 2 (TAND2) of TFIID promotes formation of stable and mobile unstable TBP-TATA complexes.
Autorzy:
Miyasaka S; Molecular and Cellular Biology Laboratory, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Kanagawa, Japan.
Kitada R; Molecular and Cellular Biology Laboratory, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Kanagawa, Japan.
Kokubo T; Molecular and Cellular Biology Laboratory, Graduate School of Medical Life Science, Yokohama City University, Yokohama, Kanagawa, Japan. Electronic address: .
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Źródło:
Gene [Gene] 2023 Dec 30; Vol. 889, pp. 147800. Date of Electronic Publication: 2023 Sep 15.
Typ publikacji:
Journal Article
MeSH Terms:
Transcription Factor TFIID*/genetics
Gene Expression Regulation*
Humans ; Transcription Factor TFIIA/genetics ; Transcription Factor TFIIA/metabolism ; TATA-Box Binding Protein/chemistry ; DNA/metabolism ; Saccharomyces cerevisiae/genetics ; TATA Box/genetics
Czasopismo naukowe
Szczegóły
Tytuł:
Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues.
Autorzy:
Crespo-Piazuelo D; Animal Breeding and Genetics Program, IRTA, Torre Marimon, Caldes de Montbui (08140), Spain.
Acloque H; GABI, Université Paris-Saclay, INRAE, AgroParisTech, Jouy-en-Josas (78350), France.
González-Rodríguez O; Animal Breeding and Genetics Program, IRTA, Torre Marimon, Caldes de Montbui (08140), Spain.
Mongellaz M; GABI, Université Paris-Saclay, INRAE, AgroParisTech, Jouy-en-Josas (78350), France.
Mercat MJ; IFIP-Institut du porc and Alliance R&D, Le Rheu (35651), France.
Bink MCAM; Hendrix Genetics Research Technology & Services B.V., Boxmeer (5830 AC), The Netherlands.
Huisman AE; Hypor B.V., Boxmeer (5830 AC), The Netherlands.
Ramayo-Caldas Y; Animal Breeding and Genetics Program, IRTA, Torre Marimon, Caldes de Montbui (08140), Spain.
Sánchez JP; Animal Breeding and Genetics Program, IRTA, Torre Marimon, Caldes de Montbui (08140), Spain.
Ballester M; Animal Breeding and Genetics Program, IRTA, Torre Marimon, Caldes de Montbui (08140), Spain.
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Źródło:
GigaScience [Gigascience] 2023 Dec 28; Vol. 12.
Typ publikacji:
Journal Article
MeSH Terms:
Genome-Wide Association Study*
Gene Expression Regulation*
Humans ; Swine/genetics ; Animals ; Polymorphism, Single Nucleotide ; Liver ; Muscles
Czasopismo naukowe
Szczegóły
Tytuł:
Exploring the role of transcriptional and post-transcriptional processes in mRNA co-expression.
Autorzy:
García-Blay Ó; Institute for Molecules and Materials, Radboud University, AJ, Nijmegen, the Netherlands.
Verhagen PGA; Institute for Molecules and Materials, Radboud University, AJ, Nijmegen, the Netherlands.
Martin B; Institute for Molecules and Materials, Radboud University, AJ, Nijmegen, the Netherlands.
Hansen MMK; Institute for Molecules and Materials, Radboud University, AJ, Nijmegen, the Netherlands.
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Źródło:
BioEssays : news and reviews in molecular, cellular and developmental biology [Bioessays] 2023 Dec; Vol. 45 (12), pp. e2300130. Date of Electronic Publication: 2023 Nov 05.
Typ publikacji:
Review; Journal Article
MeSH Terms:
Gene Expression Regulation*/genetics
Transcription, Genetic*
RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Kinetics ; Half-Life ; Promoter Regions, Genetic/genetics
Czasopismo naukowe
Szczegóły
Tytuł:
Gene transcription regulation by ER at the single cell and allele level.
Autorzy:
Stossi F; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, United States; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States. Electronic address: .
Rivera Tostado A; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States.
Johnson HL; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, United States; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States.
Mistry RM; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, United States; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States.
Mancini MG; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, United States; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States.
Mancini MA; Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, United States; GCC Center for Advanced Microscopy and Image Informatics, Houston, TX, United States; Department of Pharmacology and Chemical Biology, Baylor College of Medicine, Houston, TX, United States. Electronic address: .
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Źródło:
Steroids [Steroids] 2023 Dec; Vol. 200, pp. 109313. Date of Electronic Publication: 2023 Sep 25.
Typ publikacji:
Journal Article
MeSH Terms:
Receptors, Estrogen*/genetics
Receptors, Estrogen*/metabolism
Gene Expression Regulation*
Alleles ; Transcription Factors/metabolism ; Transcription, Genetic ; Estrogen Receptor alpha/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
Beclin1 is essential for the pancreas development.
Autorzy:
Mehanna S; Institute of Resource Development and Analysis, Kumamoto University, Kumamoto, 860-0811, Japan.
Arakawa S; Department of Pathological Cell Biology, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo, Tokyo, 113-8510, Japan.
Imasaka M; Department of Genetics, Hyogo Medical University, Nishinomiya, Hyogo, 663-8501, Japan.
Chen W; Department of Genetics, Hyogo Medical University, Nishinomiya, Hyogo, 663-8501, Japan.
Nakanishi Y; Department of Genetics, Hyogo Medical University, Nishinomiya, Hyogo, 663-8501, Japan.
Nishiura H; Division of Functional Pathology, Department of Pathology, Hyogo Medical University, Nishinomiya, Hyogo, 663-8501, Japan.
Shimizu S; Department of Pathological Cell Biology, Medical Research Institute, Tokyo Medical and Dental University, Bunkyo, Tokyo, 113-8510, Japan.
Ohmuraya M; Department of Genetics, Hyogo Medical University, Nishinomiya, Hyogo, 663-8501, Japan. Electronic address: .
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Źródło:
Developmental biology [Dev Biol] 2023 Dec; Vol. 504, pp. 113-119. Date of Electronic Publication: 2023 Sep 21.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation, Developmental*
Pancreas*/metabolism
Animals ; Mice ; Beclin-1/genetics ; Beclin-1/metabolism ; Duodenum/metabolism ; Transcription Factors/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
KDM5A noncanonically binds antagonists MLL1/2 to mediate gene regulation and promotes epithelial to mesenchymal transition.
Autorzy:
Kirtana R; Epigenetics and Cancer Research Laboratory, Biochemistry and Molecular Biology Group, Department of Life Science, National Institute of Technology, Rourkela, Odisha 769008, India.
Manna S; Epigenetics and Cancer Research Laboratory, Biochemistry and Molecular Biology Group, Department of Life Science, National Institute of Technology, Rourkela, Odisha 769008, India.
Patra SK; Epigenetics and Cancer Research Laboratory, Biochemistry and Molecular Biology Group, Department of Life Science, National Institute of Technology, Rourkela, Odisha 769008, India. Electronic address: .
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Źródło:
Biochimica et biophysica acta. Gene regulatory mechanisms [Biochim Biophys Acta Gene Regul Mech] 2023 Dec; Vol. 1866 (4), pp. 194986. Date of Electronic Publication: 2023 Sep 16.
Typ publikacji:
Journal Article
MeSH Terms:
Epithelial-Mesenchymal Transition*/genetics
Gene Expression Regulation*
Chromatin ; Transcription Factors/genetics ; Transcription Factors/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
New insights into the regulation of METTL3 and its role in tumors.
Autorzy:
Jin Q; The Key Laboratory of Pathobiology, Ministry of Education, College of Basic Medical Sciences, Jilin University, 126 Xinmin Avenue, Changchun, Jilin, 130021, People's Republic of China.
Qu H; Department of Histology and Embryology, College of Basic Medical Sciences, Jilin University, 126 Xinmin Avenue, Changchun, Jilin, 130021, People's Republic of China. .
Quan C; The Key Laboratory of Pathobiology, Ministry of Education, College of Basic Medical Sciences, Jilin University, 126 Xinmin Avenue, Changchun, Jilin, 130021, People's Republic of China. .
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Źródło:
Cell communication and signaling : CCS [Cell Commun Signal] 2023 Nov 23; Vol. 21 (1), pp. 334. Date of Electronic Publication: 2023 Nov 23.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Methyltransferases*/genetics
Gene Expression Regulation, Neoplastic*
RNA
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
A tale of 2 gasses, 1 regulator, and cholesterol homeostasis.
Autorzy:
Fenton NM; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Sydney, Australia.
Brown AJ; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Sydney, Australia.
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Źródło:
PLoS biology [PLoS Biol] 2023 Nov 22; Vol. 21 (11), pp. e3002401. Date of Electronic Publication: 2023 Nov 22 (Print Publication: 2023).
Typ publikacji:
Journal Article; Comment
MeSH Terms:
Carbon Dioxide*/metabolism
Gene Expression Regulation*
Homeostasis ; Cholesterol/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Deciphering the Role of the Ser-Phosphorylation Pattern on the DNA-Binding Activity of Max Transcription Factor Using Chemical Protein Synthesis.
Autorzy:
Nithun RV; School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv, 69978, Israel.
Yao YM; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, 7610001, Israel.
Lin X; School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv, 69978, Israel.
Habiballah S; School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv, 69978, Israel.
Afek A; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, 7610001, Israel.
Jbara M; School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv, 69978, Israel.
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Źródło:
Angewandte Chemie (International ed. in English) [Angew Chem Int Ed Engl] 2023 Nov 20; Vol. 62 (47), pp. e202310913. Date of Electronic Publication: 2023 Sep 12.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcription Factors*/metabolism
Gene Expression Regulation*
Phosphorylation ; Amino Acid Sequence ; Protein Processing, Post-Translational ; DNA/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
Expression of the transcription factor Klf6 by thymic epithelial cells is required for thymus development.
Autorzy:
Malin J; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Martinez-Ruiz GU; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Research Division, Faculty of Medicine, National Autonomous University of Mexico, Mexico City, Mexico.; Children's Hospital Federico Gomez, Mexico City, Mexico.
Zhao Y; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Shissler SC; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Cowan JE; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Institute of Immunity and Transplantation, University College London, London, UK.
Ding Y; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Morales-Sanchez A; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Children's Hospital Federico Gomez, Mexico City, Mexico.
Ishikawa M; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Department of Pathology and Laboratory Medicine, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.
Lavaert M; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Das A; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Butcher D; Molecular Histopathology Laboratory, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Warner AC; Molecular Histopathology Laboratory, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Kallarakal M; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Chen J; Office of Science and Technology Resources, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; ACROBiosystems, Newark, DE, USA.
Kedei N; Office of Science and Technology Resources, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Kelly M; Single Cell Analysis Facility, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
Brinster LR; Division of Veterinary Resources, Office of Research Services, National Institutes of Health, Bethesda, MD, USA.
Allman D; Department of Pathology and Laboratory Medicine, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.
Bhandoola A; Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.
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Źródło:
Science advances [Sci Adv] 2023 Nov 17; Vol. 9 (46), pp. eadg8126. Date of Electronic Publication: 2023 Nov 15.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*
Thymocytes*/metabolism
Animals ; Mice ; Cell Differentiation/genetics ; Chromatin/metabolism ; Epithelial Cells/metabolism ; Mice, Inbred C57BL ; Thymus Gland/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
Tuning Plant Promoters Using a Simple Split Luciferase Method to Assess Transcription Factor-DNA Interactions.
Autorzy:
Cai YM; Engineering Biology, Earlham Institute, Norwich Research Park, Norwich NR4 7UZ, U.K.
Witham S; Engineering Biology, Earlham Institute, Norwich Research Park, Norwich NR4 7UZ, U.K.
Patron NJ; Engineering Biology, Earlham Institute, Norwich Research Park, Norwich NR4 7UZ, U.K.
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Źródło:
ACS synthetic biology [ACS Synth Biol] 2023 Nov 17; Vol. 12 (11), pp. 3482-3486. Date of Electronic Publication: 2023 Oct 19.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Transcription Factors*/genetics
Transcription Factors*/metabolism
Gene Expression Regulation*
Promoter Regions, Genetic/genetics ; DNA/genetics ; Luciferases/genetics
Czasopismo naukowe
Szczegóły
Tytuł:
Characterization of NFE2L1-616, an isoform of nuclear factor-erythroid-2 related transcription factor-1 that activates antioxidant response element-regulated genes.
Autorzy:
Ho DV; Department of Laboratory Medicine and Pathology, University of California, Irvine, D440 Medical Sciences, Irvine, CA, 92697, USA.
Suryajaya KG; Department of Laboratory Medicine and Pathology, University of California, Irvine, D440 Medical Sciences, Irvine, CA, 92697, USA.
Manh K; Department of Laboratory Medicine and Pathology, University of California, Irvine, D440 Medical Sciences, Irvine, CA, 92697, USA.
Duong AN; Department of Laboratory Medicine and Pathology, University of California, Irvine, D440 Medical Sciences, Irvine, CA, 92697, USA.
Chan JY; Department of Laboratory Medicine and Pathology, University of California, Irvine, D440 Medical Sciences, Irvine, CA, 92697, USA. .
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Źródło:
Scientific reports [Sci Rep] 2023 Nov 14; Vol. 13 (1), pp. 19900. Date of Electronic Publication: 2023 Nov 14.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Antioxidant Response Elements*/genetics
Gene Expression Regulation*
Protein Isoforms/genetics ; Protein Isoforms/metabolism ; Cell Line ; NF-E2-Related Factor 1/metabolism
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Statistical learning quantifies transposable element-mediated cis-regulation.
Autorzy:
Pulver C; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Grun D; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Duc J; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Sheppard S; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Planet E; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
Coudray A; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland.
de Fondeville R; Swiss Data Science Center, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland. .
Pontis J; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland. .; SOPHiA GENETICS SA, La Pièce 12, CH-1180, Rolle, Switzerland. .
Trono D; School of Life Sciences, Swiss Federal Institute of Technology Lausanne (EPFL), CH-1015, Lausanne, Switzerland. .
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Źródło:
Genome biology [Genome Biol] 2023 Nov 10; Vol. 24 (1), pp. 258. Date of Electronic Publication: 2023 Nov 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
DNA Transposable Elements*
Gene Expression Regulation*
Humans ; Gene Regulatory Networks ; Promoter Regions, Genetic ; Protein Binding
Czasopismo naukowe
Szczegóły
Tytuł:
Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities.
Autorzy:
Müller-Dott S; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
Tsirvouli E; Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.; Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway.
Vazquez M; Barcelona Supercomputing Center, Barcelona, Spain.
Ramirez Flores RO; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
Badia-I-Mompel P; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
Fallegger R; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
Türei D; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
Lægreid A; Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
Saez-Rodriguez J; Heidelberg University, Faculty of Medicine, and Heidelberg University Hospital, Institute for Computational Biomedicine, Bioquant, Heidelberg, Germany.
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Źródło:
Nucleic acids research [Nucleic Acids Res] 2023 Nov 10; Vol. 51 (20), pp. 10934-10949.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation*
Regulon*
Transcription Factors*/metabolism
Humans ; Gene Expression Profiling ; Gene Regulatory Networks ; Reproducibility of Results
Czasopismo naukowe
Szczegóły
Tytuł:
Modulation of protein-DNA binding reveals mechanisms of spatiotemporal gene control in early Drosophila embryos.
Autorzy:
Syed S; Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, United States.
Duan Y; Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, United States.; Master of Biotechnology Program, University of Pennsylvania, Philadelphia, United States.
Lim B; Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, United States.
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Źródło:
ELife [Elife] 2023 Nov 07; Vol. 12. Date of Electronic Publication: 2023 Nov 07.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Drosophila*
Gene Expression Regulation*
Animals ; Binding Sites ; Transcription Factors ; DNA
Czasopismo naukowe
Szczegóły
Tytuł:
Upregulation of human GD3 synthase (hST8Sia I) gene expression during serum starvation-induced osteoblastic differentiation of MG-63 cells.
Autorzy:
An SY; Department of Medicinal Biotechnology, College of Health Sciences, Dong-A University, Busan, South Korea.
Yoon HK; Department of Medicinal Biotechnology, College of Health Sciences, Dong-A University, Busan, South Korea.
Kim KS; Department of Medicinal Biotechnology, College of Health Sciences, Dong-A University, Busan, South Korea.
Kim HD; Molecular and Cellular Glycobiology Unit, Department of Biological Sciences, SungKyunKwan University, Kyunggi-Do, South Korea.
Cho JH; Department of Medicinal Biotechnology, College of Health Sciences, Dong-A University, Busan, South Korea.
Kim HJ; Department of Orthopaedic Surgery, College of Medicine, Dong-A University, Busan, South Korea.
Kim CH; Molecular and Cellular Glycobiology Unit, Department of Biological Sciences, SungKyunKwan University, Kyunggi-Do, South Korea.
Lee YC; Department of Medicinal Biotechnology, College of Health Sciences, Dong-A University, Busan, South Korea.
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Źródło:
PloS one [PLoS One] 2023 Nov 02; Vol. 18 (11), pp. e0293321. Date of Electronic Publication: 2023 Nov 02 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
NF-kappa B*/metabolism
Gene Expression Regulation, Enzymologic*
Humans ; Transcriptional Activation ; Up-Regulation ; Cell Differentiation/genetics ; Gene Expression
Czasopismo naukowe
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