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Wyświetlanie 1-20 z 62111
Tytuł:
Preponderance of generalized chain functions in reconstructed Boolean models of biological networks.
Autorzy:
Mitra S; Indian Institute of Science Education and Research (IISER) Mohali, Manauli, Punjab, 140306, India.; The Institute of Mathematical Sciences (IMSc), Chennai, 600113, India.
Sil P; The Institute of Mathematical Sciences (IMSc), Chennai, 600113, India.; Homi Bhabha National Institute (HBNI), Mumbai, 400094, India.
Subbaroyan A; The Institute of Mathematical Sciences (IMSc), Chennai, 600113, India.; Homi Bhabha National Institute (HBNI), Mumbai, 400094, India.
Martin OC; Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), 91405, Orsay, France. .; Université Paris-Cité, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), 91405, Orsay, France. .
Samal A; The Institute of Mathematical Sciences (IMSc), Chennai, 600113, India. .; Homi Bhabha National Institute (HBNI), Mumbai, 400094, India. .
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Źródło:
Scientific reports [Sci Rep] 2024 Mar 20; Vol. 14 (1), pp. 6734. Date of Electronic Publication: 2024 Mar 20.
Typ publikacji:
Journal Article
MeSH Terms:
Models, Genetic*
Gene Regulatory Networks*
Logic ; Models, Biological ; Algorithms
Czasopismo naukowe
Szczegóły
Tytuł:
Uncovering co-regulatory modules and gene regulatory networks in the heart through machine learning-based analysis of large-scale epigenomic data.
Autorzy:
Vahab N; School of Computational Technologies, RMIT University, Melbourne VIC 3000, Australia; Department of Infectious Diseases, Alfred Hospital, Prahran VIC 3008, Australia.
Bonu T; Faculty of Information Technology, Monash University, Clayton VIC 3800, Australia.
Kuhlmann L; Faculty of Information Technology, Monash University, Clayton VIC 3800, Australia.
Ramialison M; Murdoch Children Research Institute, Melbourne VIC 3000, Australia.
Tyagi S; School of Computational Technologies, RMIT University, Melbourne VIC 3000, Australia; Department of Infectious Diseases, Alfred Hospital, Prahran VIC 3008, Australia. Electronic address: .
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Źródło:
Computers in biology and medicine [Comput Biol Med] 2024 Mar; Vol. 171, pp. 108068. Date of Electronic Publication: 2024 Feb 10.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*/genetics
Epigenomics*
Humans ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Algorithms ; Heart ; DNA-Binding Proteins/genetics
Czasopismo naukowe
Szczegóły
Tytuł:
Pillars of biology: Boolean modeling of gene-regulatory networks.
Autorzy:
Thakar J; Department of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, Rochester, USA; Department of Biostatistics and Computational Biology, University of Rochester School of Medicine and Dentistry, Rochester, USA. Electronic address: juilee_.
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Źródło:
Journal of theoretical biology [J Theor Biol] 2024 Feb 07; Vol. 578, pp. 111682. Date of Electronic Publication: 2023 Nov 25.
Typ publikacji:
Review; Journal Article
MeSH Terms:
Gene Regulatory Networks*
Models, Theoretical*
Biology ; Models, Genetic ; Algorithms
Czasopismo naukowe
Szczegóły
Tytuł:
Bayesian Regression Facilitates Quantitative Modeling of Cell Metabolism.
Autorzy:
Groves T; The Novo Nordisk Foundation Center for Biosustainability, DTU, Kongens Lyngby 2800, Denmark.
Cowie NL; The Novo Nordisk Foundation Center for Biosustainability, DTU, Kongens Lyngby 2800, Denmark.
Nielsen LK; The Novo Nordisk Foundation Center for Biosustainability, DTU, Kongens Lyngby 2800, Denmark.; Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland, St Lucia 4067, Australia.
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Źródło:
ACS synthetic biology [ACS Synth Biol] 2024 Apr 19; Vol. 13 (4), pp. 1205-1214. Date of Electronic Publication: 2024 Apr 05.
Typ publikacji:
Review; Journal Article
MeSH Terms:
Gene Regulatory Networks*
Bayes Theorem ; Kinetics
Czasopismo naukowe
Szczegóły
Tytuł:
Constructing eRNA-mediated gene regulatory networks to explore the genetic basis of muscle and fat-relevant traits in pigs.
Autorzy:
Wang C; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & Key Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Chen C; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & Key Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Lei B; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & Key Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Qin S; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.
Zhang Y; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; School of Life Sciences, Henan University, Kaifeng, 475004, People's Republic of China.; Shenzhen Research Institute of Henan University, Shenzhen, 518000, People's Republic of China.
Li K; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China.
Zhang S; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China. .; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China. .
Liu Y; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Key Laboratory of Livestock and Poultry Multi-Omics of MARA, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China. .; Innovation Group of Pig Genome Design and Breeding, Research Centre for Animal Genome, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, 518124, People's Republic of China. .; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education & Key Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China. .; Kunpeng Institute of Modern Agriculture at Foshan, Chinese Academy of Agricultural Sciences, Foshan, 528226, People's Republic of China. .
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Źródło:
Genetics, selection, evolution : GSE [Genet Sel Evol] 2024 Apr 09; Vol. 56 (1), pp. 28. Date of Electronic Publication: 2024 Apr 09.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Genome-Wide Association Study*
Animals ; Swine/genetics ; Epigenesis, Genetic ; Gene Expression Regulation ; Muscles
Czasopismo naukowe
Szczegóły
Tytuł:
PMF-GRN: a variational inference approach to single-cell gene regulatory network inference using probabilistic matrix factorization.
Autorzy:
Skok Gibbs C; Center for Data Science, New York University, New York, NY, 10011, USA.
Mahmood O; Center for Data Science, New York University, New York, NY, 10011, USA.
Bonneau R; Center for Data Science, New York University, New York, NY, 10011, USA.; Prescient Design, Genentech, New York, NY, 10010, USA.; Center for Genomics and Systems Biology, New York University, New York, NY, 10003, USA.
Cho K; Center for Data Science, New York University, New York, NY, 10011, USA. .; Prescient Design, Genentech, New York, NY, 10010, USA. .
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Źródło:
Genome biology [Genome Biol] 2024 Apr 08; Vol. 25 (1), pp. 88. Date of Electronic Publication: 2024 Apr 08.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Algorithms*
Czasopismo naukowe
Szczegóły
Tytuł:
Effects of mRNA conformational switching on translational noise in gene circuits.
Autorzy:
Sinzger-D'Angelo M; Centre for Synthetic Biology, Technische Universität Darmstadt, Darmstadt, Germany.
Hanst M; Centre for Synthetic Biology, Technische Universität Darmstadt, Darmstadt, Germany.
Reinhardt F; Centre for Synthetic Biology, Technische Universität Darmstadt, Darmstadt, Germany.
Koeppl H; Centre for Synthetic Biology, Technische Universität Darmstadt, Darmstadt, Germany.
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Źródło:
The Journal of chemical physics [J Chem Phys] 2024 Apr 07; Vol. 160 (13).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Models, Genetic*
RNA, Messenger/genetics ; Stochastic Processes
Czasopismo naukowe
Szczegóły
Tytuł:
A DNA circuit that records molecular events.
Autorzy:
Zhang M; Institute of Molecular Medicine (IMM), Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200127, China.; Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.
Yancey C; Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.
Zhang C; Institute of Molecular Medicine (IMM), Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200127, China.; Intellinosis Biotech Co. Ltd., Shanghai, 201112, China.
Wang J; Zhejiang Cancer Hospital, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou, Zhejiang 310022, China.
Ma Q; Intellinosis Biotech Co. Ltd., Shanghai, 201112, China.
Yang L; Institute of Molecular Medicine (IMM), Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200127, China.
Schulman R; Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.; Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA.
Han D; Institute of Molecular Medicine (IMM), Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200127, China.; Zhejiang Cancer Hospital, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou, Zhejiang 310022, China.
Tan W; Institute of Molecular Medicine (IMM), Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200127, China.; Zhejiang Cancer Hospital, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou, Zhejiang 310022, China.
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Źródło:
Science advances [Sci Adv] 2024 Apr 05; Vol. 10 (14), pp. eadn3329. Date of Electronic Publication: 2024 Apr 05.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Recombination, Genetic*
DNA/genetics
Czasopismo naukowe
Szczegóły
Tytuł:
Transcriptome organization of white blood cells through gene co-expression network analysis in a large RNA-seq dataset.
Autorzy:
Forabosco P; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Pala M; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Crobu F; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Diana MA; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Marongiu M; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Cusano R; CRS4-Next Generation Sequencing (NGS) Core, Parco POLARIS, Cagliari, Italy.
Angius A; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Steri M; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Orrù V; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Schlessinger D; Laboratory of Genetics and Genomics, National Institute on Aging, National Institutes of Health (NIH), Baltimore, MA, United States.
Fiorillo E; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.
Devoto M; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.; Dipartimento di Medicina Traslazionale e di Precisione, Università Sapienza, Roma, Italy.
Cucca F; Istituto di Ricerca Genetica e Biomedica (IRGB), Consiglio Nazionale delle Ricerche (CNR), Cagliari, Italy.; Dipartimento di Scienze Biomediche, Università degli Studi di Sassari, Sassari, Italy.
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Źródło:
Frontiers in immunology [Front Immunol] 2024 Apr 02; Vol. 15, pp. 1350111. Date of Electronic Publication: 2024 Apr 02 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Transcriptome*
Gene Regulatory Networks*
Humans ; RNA-Seq ; Gene Expression Profiling ; Leukocytes
Czasopismo naukowe
Szczegóły
Tytuł:
Automatic design of gene regulatory mechanisms for spatial pattern formation.
Autorzy:
Mousavi R; Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, MD, USA.
Lobo D; Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, MD, USA. .; Greenebaum Comprehensive Cancer Center and Center for Stem Cell Biology & Regenerative Medicine, University of Maryland, Baltimore, Baltimore, MD, USA. .
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Źródło:
NPJ systems biology and applications [NPJ Syst Biol Appl] 2024 Apr 02; Vol. 10 (1), pp. 35. Date of Electronic Publication: 2024 Apr 02.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*
Gene Regulatory Networks*/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Adaptation in Unstable Environments and Global Gene Losses: Small but Stable Gene Networks by the May-Wigner Theory.
Autorzy:
Xu S; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.; School of Ecology, Sun Yat-sen University, Shenzhen, China.
Shao S; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Feng X; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Li S; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Zhang L; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Wu W; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Liu M; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Tracy ME; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Zhong C; Institute of Wetland Research, Hainan Academy of Forestry (Hainan Academy of Mangrove), Haikou, China.
Guo Z; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Wu CI; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
Shi S; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
He Z; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Sun Yat-sen University, Guangzhou, China.
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Źródło:
Molecular biology and evolution [Mol Biol Evol] 2024 Apr 02; Vol. 41 (4).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Genome*
Gene Expression Profiling ; Plants
Czasopismo naukowe
Szczegóły
Tytuł:
INO80-Dependent Remodeling of Transcriptional Regulatory Network Underlies the Progression of Heart Failure.
Autorzy:
Ren Z; Shenzhen Key Laboratory of Cardiovascular Disease, Fuwai Hospital Chinese Academy of Medical Sciences, Shenzhen, China (Z.R., W.Z., B.Z., L.W.).
Zhao W; Shenzhen Key Laboratory of Cardiovascular Disease, Fuwai Hospital Chinese Academy of Medical Sciences, Shenzhen, China (Z.R., W.Z., B.Z., L.W.).
Li D; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Yu P; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Mao L; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Zhao Q; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Yao L; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Zhang X; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Liu Y; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Zhou B; Shenzhen Key Laboratory of Cardiovascular Disease, Fuwai Hospital Chinese Academy of Medical Sciences, Shenzhen, China (Z.R., W.Z., B.Z., L.W.).; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).
Wang L; Shenzhen Key Laboratory of Cardiovascular Disease, Fuwai Hospital Chinese Academy of Medical Sciences, Shenzhen, China (Z.R., W.Z., B.Z., L.W.).; State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (D.L., P.Y., L.M., Q.Z., L.Y., X.Z., Y.L., B.Z., L.W.).; Key Laboratory of Application of Pluripotent Stem Cells in Heart Regeneration, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China (L.W.).
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Źródło:
Circulation [Circulation] 2024 Apr 02; Vol. 149 (14), pp. 1121-1138. Date of Electronic Publication: 2023 Dec 28.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Regulatory Networks*
Heart Failure*/genetics
Heart Failure*/metabolism
Humans ; Animals ; Mice ; Chromatin Assembly and Disassembly ; Chromatin/metabolism ; Myocytes, Cardiac/metabolism ; RNA/metabolism ; Transposases/metabolism ; ATPases Associated with Diverse Cellular Activities/metabolism ; DNA-Binding Proteins/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
Data- and theory-driven approaches for understanding paths of epithelial-mesenchymal transition.
Autorzy:
Hong T; Department of Biochemistry & Cellular and Molecular Biology, The University of Tennessee, Knoxville, Tennessee, USA.
Xing J; Department of Computational and Systems Biology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.; UPMC-Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.; Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
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Źródło:
Genesis (New York, N.Y. : 2000) [Genesis] 2024 Apr; Vol. 62 (2), pp. e23591.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Epithelial-Mesenchymal Transition*/physiology
Gene Regulatory Networks*
Czasopismo naukowe
Szczegóły
Tytuł:
Dissecting gene expression networks in the developing hippocampus through the lens of NEIL3 depletion.
Autorzy:
Bugaj AM; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway.
Kunath N; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway; Department of Neuromedicine and Movement Science, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway; Department of Neurology, University Hospital of Trondheim, Trondheim 7491, Norway.
Saasen VL; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway.
Fernandez-Berrocal MS; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway.
Vankova A; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway.
Sætrom P; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway.
Bjørås M; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway; Department of Microbiology, Oslo University Hospital, University of Oslo, Oslo 0424, Norway; Centre for Embryology and Healthy Development, University of Oslo, Oslo 0373, Norway. Electronic address: .
Ye J; Department of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway. Electronic address: .
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Źródło:
Progress in neurobiology [Prog Neurobiol] 2024 Apr; Vol. 235, pp. 102599. Date of Electronic Publication: 2024 Mar 24.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Regulation*
Gene Regulatory Networks*/genetics
Animals ; Mice ; Gene Expression ; Hippocampus
Czasopismo naukowe
Szczegóły
Tytuł:
Evolutionarily conserved roles of foxg1a in the developing subpallium of zebrafish embryos.
Autorzy:
Umeda K; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
Tanaka K; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
Chowdhury G; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.; Department of Aquatic Environment and Resource Management, Sher-e-Bangla Agricultural University, Dhaka, Bangladesh.
Nasu K; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
Kuroyanagi Y; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
Yamasu K; Division of Life Science, Graduate School of Science and Engineering, Saitama University, Saitama, Japan.
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Źródło:
Development, growth & differentiation [Dev Growth Differ] 2024 Apr; Vol. 66 (3), pp. 219-234. Date of Electronic Publication: 2024 Feb 20.
Typ publikacji:
Journal Article
MeSH Terms:
Zebrafish*/genetics
Zebrafish*/metabolism
Gene Regulatory Networks*
Mice ; Animals ; Telencephalon/metabolism ; Zebrafish Proteins/genetics ; Zebrafish Proteins/metabolism ; Cerebral Cortex/metabolism ; Nerve Tissue Proteins/genetics ; Nerve Tissue Proteins/metabolism ; Forkhead Transcription Factors/genetics ; Forkhead Transcription Factors/metabolism
Czasopismo naukowe
Szczegóły
Tytuł:
Real-time single-molecule imaging of transcriptional regulatory networks in living cells.
Autorzy:
Hwang DW; Department of Cell Biology, Albert Einstein College of Medicine, New York, NY, USA.
Maekiniemi A; Department of Cell Biology, Albert Einstein College of Medicine, New York, NY, USA.
Singer RH; Department of Cell Biology, Albert Einstein College of Medicine, New York, NY, USA.
Sato H; Department of Cell Biology, Albert Einstein College of Medicine, New York, NY, USA. .; Nano Life Science Institute (WPI-Nano LSI), Kanazawa University, Kakuma-machi, Kanazawa, Japan. .
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Źródło:
Nature reviews. Genetics [Nat Rev Genet] 2024 Apr; Vol. 25 (4), pp. 272-285. Date of Electronic Publication: 2024 Jan 09.
Typ publikacji:
Journal Article; Review
MeSH Terms:
Gene Regulatory Networks*
Single Molecule Imaging*
Transcription, Genetic
Czasopismo naukowe
Szczegóły
Tytuł:
Identification of critical mitochondrial hub gene for facial nerve regeneration.
Autorzy:
Cao X; Department of Dentistry, The Second Affiliated Hospital, Harbin Medical University, Harbin, China.; Heilongjiang Provincial Key Laboratory of Hard Tissue Development and Regeneration, Harbin Medical University, Harbin, China.
Zhang Y; Department of Dentistry, The Second Affiliated Hospital, Harbin Medical University, Harbin, China.
Shi Y; Department of Dentistry, The Second Affiliated Hospital, Harbin Medical University, Harbin, China.
Li Y; Heilongjiang Provincial Key Laboratory of Hard Tissue Development and Regeneration, Harbin Medical University, Harbin, China.; Heilongjiang Academy of Medical Sciences, Harbin, China.
Gao L; Department of Dentistry, The Second Affiliated Hospital, Harbin Medical University, Harbin, China.
Wang X; Department of Dentistry, The Second Affiliated Hospital, Harbin Medical University, Harbin, China.
Sun L; Department of Human Anatomy, School of Basic Medicine, Harbin Medical University, Harbin, China.
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Źródło:
Biochemistry and cell biology = Biochimie et biologie cellulaire [Biochem Cell Biol] 2024 Apr 01; Vol. 102 (2), pp. 179-193. Date of Electronic Publication: 2023 Dec 12.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Expression Profiling*/methods
Gene Regulatory Networks*
Animals ; Rats ; Protein Interaction Maps/genetics ; Software ; Computational Biology/methods ; Gene Ontology
Czasopismo naukowe
Szczegóły
Tytuł:
Stochastic modeling of a gene regulatory network driving B cell development in germinal centers.
Autorzy:
Koshkin A; Inria Dracula, Villeurbanne, France.; Laboratory of Biology and Modelling of the Cell, Universite de Lyon, ENS de Lyon, Université Claude Bernard, CNRS UMR 5239, INSERM U1210, Lyon, France.
Herbach U; Université de Lorraine, CNRS, Inria, IECL, Nancy, France.
Martínez MR; IBM Research Zurich, Zurich, Switzerland.
Gandrillon O; Inria Dracula, Villeurbanne, France.; Laboratory of Biology and Modelling of the Cell, Universite de Lyon, ENS de Lyon, Université Claude Bernard, CNRS UMR 5239, INSERM U1210, Lyon, France.
Crauste F; Université Paris Cité, CNRS, MAP5, Paris, France.
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Źródło:
PloS one [PLoS One] 2024 Mar 28; Vol. 19 (3), pp. e0301022. Date of Electronic Publication: 2024 Mar 28 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Germinal Center*
Humans ; B-Lymphocytes ; Gene Expression Profiling ; Systems Biology
Czasopismo naukowe
Szczegóły
Tytuł:
DeepFGRN: inference of gene regulatory network with regulation type based on directed graph embedding.
Autorzy:
Gao Z; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Computer Science and Technology, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Su Y; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Xia J; Information Materials and Intelligent Sensing Laboratory of Anhui Province, Institute of Physical Science and Information Technology, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Cao RF; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Computer Science and Technology, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Ding Y; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Zheng CH; The Key Laboratory of Intelligent Computing and Signal Processing of Ministry of Education, School of Artificial Intelligence, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
Wei PJ; Information Materials and Intelligent Sensing Laboratory of Anhui Province, Institute of Physical Science and Information Technology, Anhui University, 111 Jiulong Road, Hefei, 230601, Anhui, China.
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Źródło:
Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*
Liver Neoplasms*
Humans ; Systems Biology/methods ; Transcriptome ; Algorithms ; Computational Biology/methods
Czasopismo naukowe
Szczegóły
Tytuł:
Plasticity-led and mutation-led evolutions are different modes of the same developmental gene regulatory network.
Autorzy:
Ng ETH; Department of Mathematics, Universiti Brunei Darussalam, Gadong, Brunei.
Kinjo AR; Department of Mathematics, Universiti Brunei Darussalam, Gadong, Brunei.
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Źródło:
PeerJ [PeerJ] 2024 Mar 26; Vol. 12, pp. e17102. Date of Electronic Publication: 2024 Mar 26 (Print Publication: 2024).
Typ publikacji:
Journal Article
MeSH Terms:
Gene Regulatory Networks*/genetics
Biological Evolution*
Mutation/genetics ; Phenotype
Czasopismo naukowe
Szczegóły
Wyświetlanie 1-20 z 62111

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