Skocz do pozycji: 1.

Tytuł:

Automatic design of gene regulatory mechanisms for spatial pattern formation.

Autorzy:

Mousavi R; Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, MD, USA.
Lobo D; Department of Biological Sciences, University of Maryland, Baltimore County, Baltimore, MD, USA. .; Greenebaum Comprehensive Cancer Center and Center for Stem Cell Biology & Regenerative Medicine, University of Maryland, Baltimore, Baltimore, MD, USA. .

Pokaż więcej

Źródło:

NPJ systems biology and applications [NPJ Syst Biol Appl] 2024 Apr 02; Vol. 10 (1), pp. 35. Date of Electronic Publication: 2024 Apr 02.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Expression Regulation*
Gene Regulatory Networks*/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 2.

Tytuł:

A neural network-based model framework for cell-fate decisions and development.

Autorzy:

Paczkó M; Institute of Evolution, HUN-REN Centre for Ecological Research, Konkoly-Thege M. út 29-33, 1121, Budapest, Hungary.; Doctoral School of Biology, Institute of Biology, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/C, 1117, Budapest, Hungary.
Vörös D; Institute of Evolution, HUN-REN Centre for Ecological Research, Konkoly-Thege M. út 29-33, 1121, Budapest, Hungary.; Doctoral School of Biology, Institute of Biology, ELTE Eötvös Loránd University, Pázmány Péter sétány 1/C, 1117, Budapest, Hungary.
Szabó P; Institute of Evolution, HUN-REN Centre for Ecological Research, Konkoly-Thege M. út 29-33, 1121, Budapest, Hungary.
Jékely G; Living Systems Institute, University of Exeter, Stocker Road 4QD, EX4, Exeter, UK.
Szathmáry E; Institute of Evolution, HUN-REN Centre for Ecological Research, Konkoly-Thege M. út 29-33, 1121, Budapest, Hungary. .; Center for the Conceptual Foundations of Science, Parmenides Foundation, Hindenburgstr. 15, 82343, Pöcking, Germany. .; Department of Plant Systematics, Ecology and Theoretical Biology, Eötvös Loránd University, Pázmány Péter sétány 1/C, 1117, Budapest, Hungary. .
Szilágyi A; Institute of Evolution, HUN-REN Centre for Ecological Research, Konkoly-Thege M. út 29-33, 1121, Budapest, Hungary.

Pokaż więcej

Źródło:

Communications biology [Commun Biol] 2024 Mar 14; Vol. 7 (1), pp. 323. Date of Electronic Publication: 2024 Mar 14.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Neural Networks, Computer*
Cell Differentiation/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 3.

Tytuł:

Systematic elucidation of independently modulated genes in Lactiplantibacillus plantarum reveals a trade-off between secondary and primary metabolism.

Autorzy:

Qiu S; Department of Engineering Science, University of Oxford, Oxford, UK.; School of Food and Health, Beijing Technology and Business University, Beijing, China.
Huang Y; School of Computer Science and Engineering, Beihang University, Beijing, China.
Liang S; Department of Life Science, Imperial College London, London, UK.
Zeng H; School of Food and Health, Beijing Technology and Business University, Beijing, China.
Yang A; Department of Engineering Science, University of Oxford, Oxford, UK.

Pokaż więcej

Źródło:

Microbial biotechnology [Microb Biotechnol] 2024 Feb; Vol. 17 (2), pp. e14425.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Probiotics*
Databases, Factual ; Transcription Factors ; Transcriptome

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 4.

Tytuł:

Epigenetic OCT4 regulatory network: stochastic analysis of cellular reprogramming.

Autorzy:

Bruno S; Department of Mechanical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
Schlaeger TM; Boston Children's Hospital Stem Cell Program, Boston Children's Hospital, 300 Longwood Avenue, Boston, MA, 02115, USA.
Del Vecchio D; Department of Mechanical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA. .

Pokaż więcej

Źródło:

NPJ systems biology and applications [NPJ Syst Biol Appl] 2024 Jan 06; Vol. 10 (1), pp. 3. Date of Electronic Publication: 2024 Jan 06.

Typ publikacji:

Journal Article

MeSH Terms:

Cellular Reprogramming*/genetics
Gene Regulatory Networks*/genetics
Cell Differentiation/genetics ; Chromatin ; Epigenesis, Genetic/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 5.

Tytuł:

Expanding the genetic programmability of Lactiplantibacillus plantarum.

Autorzy:

Blanch-Asensio M; Bioprogrammable Materials, INM-Leibniz Institute for New Materials, Saarbrücken, Germany.
Dey S; Bioprogrammable Materials, INM-Leibniz Institute for New Materials, Saarbrücken, Germany.
Tadimarri VS; Bioprogrammable Materials, INM-Leibniz Institute for New Materials, Saarbrücken, Germany.
Sankaran S; Bioprogrammable Materials, INM-Leibniz Institute for New Materials, Saarbrücken, Germany.

Pokaż więcej

Źródło:

Microbial biotechnology [Microb Biotechnol] 2024 Jan; Vol. 17 (1), pp. e14335. Date of Electronic Publication: 2023 Aug 28.

Typ publikacji:

Journal Article; Review

MeSH Terms:

Food*
Gene Regulatory Networks*
Animals ; Humans ; Synthetic Biology ; Lactobacillaceae

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 6.

Tytuł:

RENGE infers gene regulatory networks using time-series single-cell RNA-seq data with CRISPR perturbations.

Autorzy:

Ishikawa M; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan. .
Sugino S; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Masuda Y; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Tarumoto Y; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Seto Y; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Taniyama N; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Wagai F; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Yamauchi Y; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Kojima Y; Laboratory of Computational Life Science, National Cancer Center Research Institute, Tokyo, 104-0045, Japan.
Kiryu H; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8561, Japan.
Yusa K; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.
Eiraku M; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.; Institute for the Advanced Study of Human Biology (WPI-ASHBi), Kyoto University, Kyoto, 606-8507, Japan.
Mochizuki A; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan.

Pokaż więcej

Źródło:

Communications biology [Commun Biol] 2023 Dec 28; Vol. 6 (1), pp. 1290. Date of Electronic Publication: 2023 Dec 28.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Single-Cell Gene Expression Analysis*
Humans ; Gene Knockout Techniques ; Time Factors

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 7.

Tytuł:

Cis-Regulatory Elements in Mammals.

Autorzy:

Liu X; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Chen M; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Qu X; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Liu W; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Dou Y; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Liu Q; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Shi D; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Jiang M; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.
Li H; State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Laboratory of Animal Breeding, Disease Control and Prevention, College of Animal Science and Technology, Guangxi University, Nanning 530005, China.

Pokaż więcej

Źródło:

International journal of molecular sciences [Int J Mol Sci] 2023 Dec 26; Vol. 25 (1). Date of Electronic Publication: 2023 Dec 26.

Typ publikacji:

Journal Article; Review

MeSH Terms:

Gene Regulatory Networks*
Mammals*/genetics
Animals ; Prospective Studies ; Promoter Regions, Genetic

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 8.

Tytuł:

Bioinformatics analysis of hub genes as osteoarthritis prognostic biomarkers.

Autorzy:

Zeng J; Department of Orthopedics, The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, No. 17, Yongwaizheng Street, Donghu District, Nanchang City, Jiangxi Province, 330000, People's Republic of China.
Jiang X; Department of Orthopedics, Yugan County Hospital, No. 1, Mianshan Avenue, Yugan County, Shangrao City, Jiangxi Province, 335100, People's Republic of China.
Jiang M; Department of Orthopedics 10th, The Affiliated Hospital of Jiangxi University of Traditional Chinese Medicine, No. 445, Bayi Avenue, Donghu District, Nanchang City, Jiangxi Province, 330000, People's Republic of China.
Cao Y; Department of Orthopedics, The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, No. 17, Yongwaizheng Street, Donghu District, Nanchang City, Jiangxi Province, 330000, People's Republic of China.
Jiang Y; Department of Orthopedics, The First Affiliated Hospital, Jiangxi Medical College, Nanchang University, No. 17, Yongwaizheng Street, Donghu District, Nanchang City, Jiangxi Province, 330000, People's Republic of China. .

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 Dec 21; Vol. 13 (1), pp. 22894. Date of Electronic Publication: 2023 Dec 21.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Osteoarthritis, Knee*
Humans ; Aged ; Animals ; Rats ; Prognosis ; HLA-DR alpha-Chains ; Computational Biology ; Biomarkers ; Gene Expression Profiling

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 9.

Tytuł:

Enhancer Recognition: A Transformer Encoder-Based Method with WGAN-GP for Data Augmentation.

Autorzy:

Feng T; College of Information Science & Engineering, Lanzhou University, Lanzhou 730000, China.
Hu T; College of Information Science & Engineering, Lanzhou University, Lanzhou 730000, China.
Liu W; College of Ecology, Lanzhou University, Lanzhou 730000, China.
Zhang Y; Supercomputer Center, Lanzhou University, Lanzhou 730000, China.

Pokaż więcej

Źródło:

International journal of molecular sciences [Int J Mol Sci] 2023 Dec 16; Vol. 24 (24). Date of Electronic Publication: 2023 Dec 16.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Labor, Obstetric*
Pregnancy ; Female ; Humans ; Data Accuracy ; Electric Power Supplies ; Recognition, Psychology

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 10.

Tytuł:

Systematic single cell RNA sequencing analysis reveals unique transcriptional regulatory networks of Atoh1-mediated hair cell conversion in adult mouse cochleae.

Autorzy:

Tu S; Department of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States of America.
Zuo J; Department of Biomedical Sciences, Creighton University School of Medicine, Omaha, NE, United States of America.

Pokaż więcej

Źródło:

PloS one [PLoS One] 2023 Dec 11; Vol. 18 (12), pp. e0284685. Date of Electronic Publication: 2023 Dec 11 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Basic Helix-Loop-Helix Transcription Factors*/genetics
Basic Helix-Loop-Helix Transcription Factors*/metabolism
Animals ; Mice ; Animals, Newborn ; Hair Cells, Auditory/metabolism ; Cochlea/metabolism ; Sequence Analysis, RNA ; Mammals/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 11.

Tytuł:

Transcriptomics reveals a core transcriptional network of K-type cytoplasmic male sterility microspore abortion in wheat (Triticum aestivum L.).

Autorzy:

Wu B; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Xia Y; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.; School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China.
Zhang G; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Wang Y; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Wang J; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Ma S; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Song Y; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Yang Z; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China.
Ma L; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China. .
Niu N; College of Agronomy, Northwest A & F University, Key Laboratory of Crop Heterosis of Shaanxi Province, Wheat Breeding Engineering Research Center, Ministry of Education, Yangling, 712100, Shaanxi, China. .

Pokaż więcej

Źródło:

BMC plant biology [BMC Plant Biol] 2023 Dec 06; Vol. 23 (1), pp. 618. Date of Electronic Publication: 2023 Dec 06.

Typ publikacji:

Journal Article

MeSH Terms:

Triticum*/metabolism
Gene Regulatory Networks*
Plant Infertility/genetics ; Plant Growth Regulators/metabolism ; Seeds ; Gene Expression Profiling ; Transcriptome ; Cytoplasm/genetics ; Hormones/metabolism ; Gene Expression Regulation, Plant

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 12.

Tytuł:

Learning massive interpretable gene regulatory networks of the human brain by merging Bayesian networks.

Autorzy:

Bernaola N; Computational Intelligence Group, Departamento de Inteligencia Artificial, Universidad Politécnica de Madrid, Madrid, Spain.
Michiels M; Centro Integral de Neurociencias Abarca Campal, Hospital Universitario HM Puerta del Sur, Madrid, Spain.
Larrañaga P; Computational Intelligence Group, Departamento de Inteligencia Artificial, Universidad Politécnica de Madrid, Madrid, Spain.
Bielza C; Computational Intelligence Group, Departamento de Inteligencia Artificial, Universidad Politécnica de Madrid, Madrid, Spain.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Dec 01; Vol. 19 (12), pp. e1011443. Date of Electronic Publication: 2023 Dec 01 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*/genetics
Artificial Intelligence*
Humans ; Bayes Theorem ; Computational Biology/methods ; Algorithms ; Brain

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 13.

Tytuł:

Only a topological method can identify all possible network structures capable of Robust Perfect Adaptation.

Autorzy:

Araujo RP; School of Mathematical Sciences, Queensland University of Technology, Brisbane, Queensland, Australia.
Liotta LA; Center for Applied Proteomics and Molecular Medicine, George Mason University, Manassas, Virginia, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Nov 22; Vol. 19 (11), pp. e1011638. Date of Electronic Publication: 2023 Nov 22 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Models, Biological*

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 14.

Tytuł:

Gene communities in co-expression networks across different tissues.

Autorzy:

Russell M; Department of Mathematics, State University of New York at Buffalo, Buffalo, New York, United States of America.
Aqil A; Department of Biological Sciences, State University of New York at Buffalo, Buffalo, New York, United States of America.
Saitou M; Faculty of Biosciences, Norwegian University of Life Sciences, Ås, Norway.
Gokcumen O; Department of Biological Sciences, State University of New York at Buffalo, Buffalo, New York, United States of America.
Masuda N; Department of Mathematics, State University of New York at Buffalo, Buffalo, New York, United States of America.; Institute for Artificial Intelligence and Data Science, State University of New York at Buffalo, Buffalo, New York, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Nov 17; Vol. 19 (11), pp. e1011616. Date of Electronic Publication: 2023 Nov 17 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*/genetics
Quantitative Trait Loci*/genetics
Humans ; Pancreatic Elastase

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 15.

Tytuł:

scapGNN: A graph neural network-based framework for active pathway and gene module inference from single-cell multi-omics data.

Autorzy:

Han X; State Key Laboratory of Reproductive Medicine and Offspring Health, School of Medicine, Southeast University, Nanjing, China.; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Wang B; State Key Laboratory of Reproductive Medicine and Offspring Health, School of Medicine, Southeast University, Nanjing, China.; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Situ C; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Qi Y; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Zhu H; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Li Y; Department of Clinical Laboratory, Sir Run Run Hospital, Nanjing Medical University, Nanjing, China.
Guo X; State Key Laboratory of Reproductive Medicine and Offspring Health, School of Medicine, Southeast University, Nanjing, China.; Department of Histology and Embryology, State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.

Pokaż więcej

Źródło:

PLoS biology [PLoS Biol] 2023 Nov 13; Vol. 21 (11), pp. e3002369. Date of Electronic Publication: 2023 Nov 13 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Multiomics*
Computational Biology/methods ; Neural Networks, Computer

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 16.

Tytuł:

Dimensionality reduction methods for extracting functional networks from large-scale CRISPR screens.

Autorzy:

Hassan AZ; Department of Computer Science and Engineering, University of Minnesota - Twin Cities, Minneapolis, MN, USA.
Ward HN; Bioinformatics and Computational Biology Graduate Program, University of Minnesota - Twin Cities, Minneapolis, MN, USA.
Rahman M; Department of Computer Science and Engineering, University of Minnesota - Twin Cities, Minneapolis, MN, USA.
Billmann M; Department of Computer Science and Engineering, University of Minnesota - Twin Cities, Minneapolis, MN, USA.; Institute of Human Genetics, University of Bonn, School of Medicine and University Hospital Bonn, Bonn, Germany.
Lee Y; Bioinformatics and Computational Biology Graduate Program, University of Minnesota - Twin Cities, Minneapolis, MN, USA.
Myers CL; Department of Computer Science and Engineering, University of Minnesota - Twin Cities, Minneapolis, MN, USA.; Bioinformatics and Computational Biology Graduate Program, University of Minnesota - Twin Cities, Minneapolis, MN, USA.

Pokaż więcej

Źródło:

Molecular systems biology [Mol Syst Biol] 2023 Nov 09; Vol. 19 (11), pp. e11657. Date of Electronic Publication: 2023 Sep 26.

Typ publikacji:

Journal Article

MeSH Terms:

Oncogenes*
Gene Regulatory Networks*
Humans ; Cell Line, Tumor ; CRISPR-Cas Systems/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 17.

Tytuł:

SIGNET: transcriptome-wide causal inference for gene regulatory networks.

Autorzy:

Jiang Z; Department of Statistics, Purdue University, West Lafayette, IN, 47907, USA.
Chen C; UCB Pharma, Brussels, 1070, Belgium.
Xu Z; Department of Statistics, Purdue University, West Lafayette, IN, 47907, USA.
Wang X; ByteDance, Shanghai, 201107, China.
Zhang M; Department of Statistics, Purdue University, West Lafayette, IN, 47907, USA.; Department of Epidemiology and Biostatistics, University of California, Irvine, CA, 92617, USA.
Zhang D; Department of Epidemiology and Biostatistics, University of California, Irvine, CA, 92617, USA. .

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 Nov 08; Vol. 13 (1), pp. 19371. Date of Electronic Publication: 2023 Nov 08.

Typ publikacji:

Journal Article; Research Support, N.I.H., Extramural

MeSH Terms:

Gene Regulatory Networks*
Transcriptome*
Humans ; Gene Expression Profiling ; Algorithms ; Causality

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 18.

Tytuł:

MIGGRI: A multi-instance graph neural network model for inferring gene regulatory networks for Drosophila from spatial expression images.

Autorzy:

Huang Y; Department of Computer Science and Engineering, Shanghai Jiao Tong University, and Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering, Shanghai, China.
Yu G; Department of Computer Science and Engineering, Shanghai Jiao Tong University, and Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering, Shanghai, China.
Yang Y; Department of Computer Science and Engineering, Shanghai Jiao Tong University, and Key Laboratory of Shanghai Education Commission for Intelligent Interaction and Cognitive Engineering, Shanghai, China.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Nov 08; Vol. 19 (11), pp. e1011623. Date of Electronic Publication: 2023 Nov 08 (Print Publication: 2023).

Typ publikacji:

Journal Article

MeSH Terms:

Drosophila*/genetics
Gene Regulatory Networks*/genetics
Animals ; Computational Biology/methods ; Neural Networks, Computer ; Gene Expression Profiling/methods

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 19.

Tytuł:

Gene regulatory network reconstruction: harnessing the power of single-cell multi-omic data.

Autorzy:

Kim D; School of Mathematics and Statistics, University of Sydney, Camperdown, NSW, Australia.; Computational Systems Biology Unit, Children's Medical Research Institute, University of Sydney, Camperdown, NSW, Australia.; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia.
Tran A; School of Mathematics and Statistics, University of Sydney, Camperdown, NSW, Australia.; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia.; Charles Perkins Centre, University of Sydney, Camperdown, NSW, Australia.
Kim HJ; Computational Systems Biology Unit, Children's Medical Research Institute, University of Sydney, Camperdown, NSW, Australia.; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia.
Lin Y; School of Mathematics and Statistics, University of Sydney, Camperdown, NSW, Australia.; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia.; Charles Perkins Centre, University of Sydney, Camperdown, NSW, Australia.
Yang JYH; School of Mathematics and Statistics, University of Sydney, Camperdown, NSW, Australia. .; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia. .; Charles Perkins Centre, University of Sydney, Camperdown, NSW, Australia. .
Yang P; School of Mathematics and Statistics, University of Sydney, Camperdown, NSW, Australia. .; Computational Systems Biology Unit, Children's Medical Research Institute, University of Sydney, Camperdown, NSW, Australia. .; Sydney Precision Data Science Centre, University of Sydney, Camperdown, NSW, Australia. .; Charles Perkins Centre, University of Sydney, Camperdown, NSW, Australia. .

Pokaż więcej

Źródło:

NPJ systems biology and applications [NPJ Syst Biol Appl] 2023 Oct 19; Vol. 9 (1), pp. 51. Date of Electronic Publication: 2023 Oct 19.

Typ publikacji:

Journal Article; Review

MeSH Terms:

Multiomics*
Gene Regulatory Networks*/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 20.

Tytuł:

Transmembrane protein 184B (TMEM184B) promotes expression of synaptic gene networks in the mouse hippocampus.

Autorzy:

Wright EB; Department of Neuroscience, 1040 E 4th Street, Tucson, Arizona, 85721, USA.
Larsen EG; Department of Neuroscience, 1040 E 4th Street, Tucson, Arizona, 85721, USA.
Coloma-Roessle CM; Department of Neuroscience, 1040 E 4th Street, Tucson, Arizona, 85721, USA.
Hart HR; Department of Neuroscience, 1040 E 4th Street, Tucson, Arizona, 85721, USA.
Bhattacharya MRC; Department of Neuroscience, 1040 E 4th Street, Tucson, Arizona, 85721, USA. .

Pokaż więcej

Źródło:

BMC genomics [BMC Genomics] 2023 Sep 20; Vol. 24 (1), pp. 559. Date of Electronic Publication: 2023 Sep 20.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Alzheimer Disease*
Humans ; Young Adult ; Animals ; Mice ; Infant ; Genotype ; Hippocampus ; Membrane Proteins/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 21.

Tytuł:

Association analysis of agronomic traits and construction of genetic networks by resequencing of 306 sugar beet (Beta vulgaris L.) lines.

Autorzy:

Wang L; Key Laboratory of Herbage and Endemic Crop Biology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, China.; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zhang Z; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Han P; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Liang Y; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zhang H; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Fu Z; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zhao S; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
E Y; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zhang H; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Wu X; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zhang B; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Chang Y; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Tang K; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Zheng W; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China.
Chen L; College of Modern Agriculture and Ecological Environment, Heilongjiang University, Heilongjiang, China.
Wang R; Beet Breeding and Seed Processing Laboratory, Institute for Sugar Beet Research, Shihezi Academy of Agricultural Sciences, Shihezi, China.
Gao W; Research Industrial of Economic Crops, Xinjiang Academy of Agricultural Sciences, Urumuqi, China.
Hasi A; Key Laboratory of Herbage and Endemic Crop Biology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, China. .
Li X; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China. .
Bai C; Key Laboratory of Sugar Beet Genetics and Germplasm Enhancement, Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, Hohhot, China. .

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 Sep 18; Vol. 13 (1), pp. 15422. Date of Electronic Publication: 2023 Sep 18.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Beta vulgaris*/genetics
Plant Breeding ; Sequence Analysis, DNA ; Vegetables ; Sugars

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 22.

Tytuł:

Inferring gene regulatory network from single-cell transcriptomes with graph autoencoder model.

Autorzy:

Wang J; Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China.; Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, Zhejiang, China.
Chen Y; Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China.
Zou Q; Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China.; Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, Zhejiang, China.

Pokaż więcej

Źródło:

PLoS genetics [PLoS Genet] 2023 Sep 13; Vol. 19 (9), pp. e1010942. Date of Electronic Publication: 2023 Sep 13 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*/genetics
Triple Negative Breast Neoplasms*
Humans ; Leukocytes, Mononuclear ; Transcriptome/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 23.

Tytuł:

Spatial biology of Ising-like synthetic genetic networks.

Autorzy:

Simpson K; ANID - Millennium Science Initiative Program, Millennium Institute for Integrative Biology (iBio), Santiago, Chile.
L'Homme A; Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.
Keymer J; Institute for Advanced Studies, Shenzhen X-Institute, Shenzhen, China. .; Schools of Physics and Biology, Pontificia Universidad Católica de Chile, Santiago, Chile. .; Department of Natural Sciences and Technology, Universidad de Aysén, Coyhaique, Chile. .
Federici F; ANID - Millennium Science Initiative Program, Millennium Institute for Integrative Biology (iBio), Santiago, Chile. .; Institute for Biological and Medical Engineering, Schools of Engineering, Medicine and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile. .; FONDAP Center for Genome Regulation - Department of Molecular Genetics and Microbiology, Pontificia Universidad Católica de Chile, Santiago, Chile. .

Pokaż więcej

Źródło:

BMC biology [BMC Biol] 2023 Sep 04; Vol. 21 (1), pp. 185. Date of Electronic Publication: 2023 Sep 04.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Escherichia coli*/genetics
Cell Shape ; Computer Simulation ; Synthetic Biology

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 24.

Tytuł:

Phylogenetic inference of the emergence of sequence modules and protein-protein interactions in the ADAMTS-TSL family.

Autorzy:

Dennler O; Univ Rennes, Inria, CNRS, IRISA, UMR 6074, Rennes, France.; Univ Rennes, Inserm, EHESP, Irset, UMR S1085, Rennes, France.
Coste F; Univ Rennes, Inria, CNRS, IRISA, UMR 6074, Rennes, France.
Blanquart S; Univ Rennes, Inria, CNRS, IRISA, UMR 6074, Rennes, France.
Belleannée C; Univ Rennes, Inria, CNRS, IRISA, UMR 6074, Rennes, France.
Théret N; Univ Rennes, Inria, CNRS, IRISA, UMR 6074, Rennes, France.; Univ Rennes, Inserm, EHESP, Irset, UMR S1085, Rennes, France.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Aug 31; Vol. 19 (8), pp. e1011404. Date of Electronic Publication: 2023 Aug 31 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Humans ; Phylogeny ; Conserved Sequence ; Phenotype

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 25.

Tytuł:

Inferring gene regulatory networks using transcriptional profiles as dynamical attractors.

Autorzy:

Li R; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America.
Rozum JC; Department of Systems Science and Industrial Engineering, Binghamton University (State University of New York), Binghamton, New York, United States of America.
Quail MM; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America.
Qasim MN; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America.
Sindi SS; Department of Applied Mathematics, University of California, Merced, Merced, California, United States of America.
Nobile CJ; Department of Molecular Cell Biology, University of California, Merced, Merced, California, United States of America.; Health Sciences Research Institute, University of California, Merced, Merced, California, United States of America.
Albert R; Department of Physics, Pennsylvania State University, University Park, University Park, Pennsylvania, United States of America.; Department of Biology, Pennsylvania State University, University Park, University Park, Pennsylvania, United States of America.
Hernday AD; Department of Molecular Cell Biology, University of California, Merced, Merced, California, United States of America.; Health Sciences Research Institute, University of California, Merced, Merced, California, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Aug 22; Vol. 19 (8), pp. e1010991. Date of Electronic Publication: 2023 Aug 22 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

MeSH Terms:

Gene Regulatory Networks*/genetics
Algorithms*
Bayes Theorem ; Biological Evolution ; Candida albicans/genetics ; RNA, Messenger

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 26.

Tytuł:

Nonlinear expression patterns and multiple shifts in gene network interactions underlie robust phenotypic change in Drosophila melanogaster selected for night sleep duration.

Autorzy:

Souto-Maior C; Laboratory of Systems Genetics, Systems Biology Center, National Heart Lung and Blood Institute, Bethesda, Maryland, United States of America.
Serrano Negron YL; Laboratory of Systems Genetics, Systems Biology Center, National Heart Lung and Blood Institute, Bethesda, Maryland, United States of America.
Harbison ST; Laboratory of Systems Genetics, Systems Biology Center, National Heart Lung and Blood Institute, Bethesda, Maryland, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Aug 10; Vol. 19 (8), pp. e1011389. Date of Electronic Publication: 2023 Aug 10 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, N.I.H., Intramural

MeSH Terms:

Drosophila melanogaster*/genetics
Gene Regulatory Networks*/genetics
Animals ; Sleep Duration ; Gene Expression Regulation/genetics ; Phenotype ; Sleep/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 27.

Tytuł:

Essential genes Ptgs2, Tlr4, and Ccr2 regulate neuro-inflammation during the acute phase of cerebral ischemic in mice.

Autorzy:

Jiang H; Department of Neurosurgery, Renmin Hospital of Wuhan University, 238 Jiefang Road, Wuchang Distict, Wuhan, 430060, Hubei Province, China.; Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, 430060, Hubei Province, China.
Sun Z; Department of Neurosurgery, Renmin Hospital of Wuhan University, 238 Jiefang Road, Wuchang Distict, Wuhan, 430060, Hubei Province, China.; Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, 430060, Hubei Province, China.
Zhu X; Central Laboratory, Renmin Hospital of Wuhan University, Wuhan, 430060, Hubei Province, China.
Li F; Department of Neurosurgery, Renmin Hospital of Wuhan University, 238 Jiefang Road, Wuchang Distict, Wuhan, 430060, Hubei Province, China. .
Chen Q; Department of Neurosurgery, Renmin Hospital of Wuhan University, 238 Jiefang Road, Wuchang Distict, Wuhan, 430060, Hubei Province, China. .

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 Aug 10; Vol. 13 (1), pp. 13021. Date of Electronic Publication: 2023 Aug 10.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
MicroRNAs*/genetics
Animals ; Mice ; Computational Biology/methods ; Cyclooxygenase 2/genetics ; Gene Expression Profiling/methods ; Gene Expression Regulation, Neoplastic ; Genes, Essential ; Infarction, Middle Cerebral Artery/genetics ; Neuroinflammatory Diseases ; Receptors, CCR2/genetics ; Receptors, Chemokine/genetics ; Toll-Like Receptor 4/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 28.

Tytuł:

From time-series transcriptomics to gene regulatory networks: A review on inference methods.

Autorzy:

Marku M; CRCT, Université de Toulouse, Inserm, CNRS, Université Toulouse III-Paul Sabatier, Centre de Recherches en Cancérologie de Toulouse, Toulouse, France.
Pancaldi V; CRCT, Université de Toulouse, Inserm, CNRS, Université Toulouse III-Paul Sabatier, Centre de Recherches en Cancérologie de Toulouse, Toulouse, France.; Barcelona Supercomputing Center, Barcelona, Spain.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Aug 10; Vol. 19 (8), pp. e1011254. Date of Electronic Publication: 2023 Aug 10 (Print Publication: 2023).

Typ publikacji:

Journal Article; Review; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*/genetics
Transcriptome*/genetics
Gene Expression Profiling ; Algorithms ; Computational Biology/methods

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 29.

Tytuł:

Ensemble inference of unobserved infections in networks using partial observations.

Autorzy:

Zhang R; School of Mathematical Sciences, Dalian University of Technology, Dalian, China.
Tai J; School of Mathematical Sciences, Dalian University of Technology, Dalian, China.
Pei S; Department of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 Aug 07; Vol. 19 (8), pp. e1011355. Date of Electronic Publication: 2023 Aug 07 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, P.H.S.

MeSH Terms:

Algorithms*
Gene Regulatory Networks*
Humans ; Bayes Theorem

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 30.

Tytuł:

CastNet: a systems-level sequence evolution simulator.

Autorzy:

Rivera-Rivera CJ; University of Bristol, Life Sciences Building, 24 Tyndall Avenue, Bristol, BS8 1TG, UK. .
Grbic D; IT-University of Copenhagen, Rued Langgaards Vej 7, 2300, Copenhagen, Denmark.

Pokaż więcej

Źródło:

BMC bioinformatics [BMC Bioinformatics] 2023 Jun 12; Vol. 24 (1), pp. 247. Date of Electronic Publication: 2023 Jun 12.

Typ publikacji:

Journal Article

MeSH Terms:

Evolution, Molecular*
Gene Regulatory Networks*
Computer Simulation ; Genomics ; Internet

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 31.

Tytuł:

GRaNIE and GRaNPA: inference and evaluation of enhancer-mediated gene regulatory networks.

Autorzy:

Kamal A; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.; Faculty of Biosciences, Collaboration for Joint PhD Degree between EMBL and Heidelberg University, Heidelberg, Germany.
Arnold C; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Claringbould A; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Moussa R; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Servaas NH; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Kholmatov M; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Daga N; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Nogina D; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Mueller-Dott S; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Reyes-Palomares A; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Palla G; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Sigalova O; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.; Faculty of Biosciences, Collaboration for Joint PhD Degree between EMBL and Heidelberg University, Heidelberg, Germany.
Bunina D; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.
Pabst C; Department of Medicine V, Hematology, Oncology and Rheumatology, University Hospital Heidelberg, Heidelberg, Germany.; Molecular Medicine Partnership Unit, University of Heidelberg, Heidelberg, Germany.
Zaugg JB; European Molecular Biology Laboratory, Structural and Computational Biology Unit, Heidelberg, Germany.; Molecular Medicine Partnership Unit, University of Heidelberg, Heidelberg, Germany.

Pokaż więcej

Źródło:

Molecular systems biology [Mol Syst Biol] 2023 Jun 12; Vol. 19 (6), pp. e11627. Date of Electronic Publication: 2023 Apr 19.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Neoplasms*/genetics
Humans ; Gene Expression Regulation ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Chromatin ; Enhancer Elements, Genetic/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 32.

Tytuł:

A systems biology approach to pathogenesis of gastric cancer: gene network modeling and pathway analysis.

Autorzy:

Mottaghi-Dastjerdi N; Department of Pharmacognosy and Pharmaceutical Biotechnology, School of Pharmacy, Iran University of Medical Sciences, Tehran, Iran. .
Ghorbani A; Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute (NSTRI), Karaj, Iran. .
Montazeri H; Department of Pharmacognosy and Pharmaceutical Biotechnology, School of Pharmacy, Iran University of Medical Sciences, Tehran, Iran.
Guzzi PH; Department of Surgical and Medical Sciences, University 'Magna Græcia' of Catanzaro, Catanzaro, Italy.

Pokaż więcej

Źródło:

BMC gastroenterology [BMC Gastroenterol] 2023 Jul 24; Vol. 23 (1), pp. 248. Date of Electronic Publication: 2023 Jul 24.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Stomach Neoplasms*/pathology
Humans ; Systems Biology ; Gene Expression Profiling/methods ; Protein Interaction Maps/genetics ; Gene Expression Regulation, Neoplastic

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 33.

Tytuł:

Development and validation of asthma risk prediction models using co-expression gene modules and machine learning methods.

Autorzy:

Dessie EY; Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Gautam Y; Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Ding L; Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Altaye M; Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Beyene J; Department of Health Research Methods, Evidence, and Impact, McMaster University, Hamilton, Canada.
Mersha TB; Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, OH, USA. .

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 Jul 12; Vol. 13 (1), pp. 11279. Date of Electronic Publication: 2023 Jul 12.

Typ publikacji:

Journal Article; Research Support, N.I.H., Extramural

MeSH Terms:

Gene Regulatory Networks*
Asthma*/genetics
Humans ; Phosphatidylinositol 3-Kinases ; Nose ; Machine Learning

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 34.

Tytuł:

GeCoNet-Tool: a software package for gene co-expression network construction and analysis.

Autorzy:

Kuang J; Department of Electrical and Computer Engineering, Kansas State University, Manhattan, KS, 66506, USA. .
Michel K; Division of Biology, Kansas State University, Manhattan, KS, 66506, USA.
Scoglio C; Department of Electrical and Computer Engineering, Kansas State University, Manhattan, KS, 66506, USA.

Pokaż więcej

Źródło:

BMC bioinformatics [BMC Bioinformatics] 2023 Jul 11; Vol. 24 (1), pp. 281. Date of Electronic Publication: 2023 Jul 11.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Software*

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 35.

Tytuł:

Assessing biological network dynamics: comparing numerical simulations with analytical decomposition of parameter space.

Autorzy:

Hari K; Centre for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, 560012, India.
Duncan W; Department of Mathematical Sciences, Montana State University, Bozeman, MT, 59717, USA.
Ibrahim MA; Department of Chemical Engineering, Indian Institute of Technology Hyderabad, Hyderabad, 502285, India.
Jolly MK; Centre for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, 560012, India. .
Cummins B; Department of Mathematical Sciences, Montana State University, Bozeman, MT, 59717, USA. .
Gedeon T; Department of Mathematical Sciences, Montana State University, Bozeman, MT, 59717, USA. .

Pokaż więcej

Źródło:

NPJ systems biology and applications [NPJ Syst Biol Appl] 2023 Jul 03; Vol. 9 (1), pp. 29. Date of Electronic Publication: 2023 Jul 03.

Typ publikacji:

Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*/genetics
Models, Theoretical*
Computer Simulation

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 36.

Tytuł:

Gene regulatory network inference based on a nonhomogeneous dynamic Bayesian network model with an improved Markov Monte Carlo sampling.

Autorzy:

Zhang J; College of Artificial Intelligence and Big Data, Hefei University, Hefei, 230031, China.
Hu C; College of Artificial Intelligence and Big Data, Hefei University, Hefei, 230031, China. .
Zhang Q; College of Artificial Intelligence and Big Data, Hefei University, Hefei, 230031, China.

Pokaż więcej

Źródło:

BMC bioinformatics [BMC Bioinformatics] 2023 Jun 24; Vol. 24 (1), pp. 264. Date of Electronic Publication: 2023 Jun 24.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
Algorithms*
Bayes Theorem ; Markov Chains ; Saccharomyces cerevisiae/genetics ; Monte Carlo Method

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 37.

Tytuł:

Serotonin transporter (5-HTT) gene network moderates the impact of prenatal maternal adversity on orbitofrontal cortical thickness in middle childhood.

Autorzy:

Sunderji A; Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.
Gallant HD; Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.
Hall A; Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.
Davis AD; Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.
Pokhvisneva I; Department of Psychiatry, Faculty of Medicine and Health Sciences, McGill University, Montreal, QC, Canada.; Ludmer Centre for Neuroinformatics and Mental Health, Douglas Mental Health University Institute, McGill University, Montreal, QC, Canada.
Meaney MJ; Department of Psychiatry, Faculty of Medicine and Health Sciences, McGill University, Montreal, QC, Canada.; Ludmer Centre for Neuroinformatics and Mental Health, Douglas Mental Health University Institute, McGill University, Montreal, QC, Canada.; Translational Neuroscience Program, Singapore Institute for Clinical Sciences and Brain-Body Initiative, Agency for Science, Technology and Research (A*STAR), Singapore Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Silveira PP; Department of Psychiatry, Faculty of Medicine and Health Sciences, McGill University, Montreal, QC, Canada.; Ludmer Centre for Neuroinformatics and Mental Health, Douglas Mental Health University Institute, McGill University, Montreal, QC, Canada.
Sassi RB; Department of Psychiatry, University of British Columbia, Vancouver, BC, Canada.
Hall GB; Department of Psychology, Neuroscience & Behaviour, McMaster University, Hamilton, ON, Canada.

Pokaż więcej

Źródło:

PloS one [PLoS One] 2023 Jun 15; Vol. 18 (6), pp. e0287289. Date of Electronic Publication: 2023 Jun 15 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Serotonin Plasma Membrane Transport Proteins*/genetics
Gene Regulatory Networks*
Female ; Pregnancy ; Humans ; Child ; Child, Preschool ; Prefrontal Cortex/diagnostic imaging ; Family

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 38.

Tytuł:

Transposons contribute to the acquisition of cell type-specific cis-elements in the brain.

Autorzy:

Sekine K; Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.; Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.
Onoguchi M; Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan. .; Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan. .
Hamada M; Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan. .; Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan. .; Graduate School of Medicine, Nippon Medical School, Tokyo, Japan. .

Pokaż więcej

Źródło:

Communications biology [Commun Biol] 2023 Jun 10; Vol. 6 (1), pp. 631. Date of Electronic Publication: 2023 Jun 10.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
DNA Transposable Elements*/genetics
Humans ; Animals ; Vertebrates/genetics ; Protein Binding ; Mammals/genetics ; Brain

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 39.

Tytuł:

Soybean gene co-expression network analysis identifies two co-regulated gene modules associated with nodule formation and development.

Autorzy:

Piya S; Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee, 37996, USA.
Pantalone V; Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee, 37996, USA.
Zadegan SB; Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee, 37996, USA.
Shipp S; Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee, 37996, USA.
Lakhssassi N; Department of Plant, Soil and Agricultural Systems, Southern Illinois University, Carbondale, Illinois, 62901, USA.
Knizia D; Department of Plant, Soil and Agricultural Systems, Southern Illinois University, Carbondale, Illinois, 62901, USA.
Krishnan HB; Plant Science Division, University of Missouri, Columbia, Missouri, USA.; Plant Genetics Research, USDA Agricultural Research Service, Columbia, Missouri, USA.
Meksem K; Department of Plant, Soil and Agricultural Systems, Southern Illinois University, Carbondale, Illinois, 62901, USA.
Hewezi T; Department of Plant Sciences, University of Tennessee, Knoxville, Tennessee, 37996, USA.

Pokaż więcej

Źródło:

Molecular plant pathology [Mol Plant Pathol] 2023 Jun; Vol. 24 (6), pp. 628-636. Date of Electronic Publication: 2023 Mar 28.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Glycine max*/genetics
Gene Regulatory Networks*
Gene Expression Regulation, Plant/genetics ; Gene Expression Profiling ; Transcription Factors/genetics

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 40.

Tytuł:

Adhesion and biofilm formation by the opportunistic pathogen Candida tropicalis : what do we know?

Autorzy:

de Souza CM; Department of Microbiology, Paraná State University of Londrina, Paraná, Brazil. C.P. 6001, 86051990.
Dos Santos MM; Department of Microbiology, Paraná State University of Londrina, Paraná, Brazil. C.P. 6001, 86051990.
Furlaneto-Maia L; Technological Federal University of Paraná, Paraná, Brazil.
Furlaneto MC; Department of Microbiology, Paraná State University of Londrina, Paraná, Brazil. C.P. 6001, 86051990.

Pokaż więcej

Źródło:

Canadian journal of microbiology [Can J Microbiol] 2023 Jun 01; Vol. 69 (6), pp. 207-218. Date of Electronic Publication: 2023 Feb 21.

Typ publikacji:

Journal Article; Review

MeSH Terms:

Candida tropicalis*/genetics
Gene Regulatory Networks*
Biofilms ; Quorum Sensing ; Phenotype

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknieSzczegóły

Skocz do pozycji: 41.

Tytuł:

RNA Regulatory Networks 2.0.

Autorzy:

Enguita FJ; Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Av. Prof. Egas Moniz, 1649-028 Lisboa, Portugal.
Leitão AL; Department of Chemistry, NOVA School of Science and Technology, FCT NOVA, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal.
Mattick JS; School of Biotechnology and Biomolecular Sciences, UNSW Sydney, Sydney, NSW 2052, Australia.

Pokaż więcej

Źródło:

International journal of molecular sciences [Int J Mol Sci] 2023 May 19; Vol. 24 (10). Date of Electronic Publication: 2023 May 19.

Typ publikacji:

Editorial

MeSH Terms:

RNA*/genetics
Gene Regulatory Networks*

Opinia redakcyjna

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 42.

Tytuł:

Structure learning for gene regulatory networks.

Autorzy:

Federico A; Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States of America.; Bioinformatics Program, Boston University, Boston, Massachusetts, United States of America.
Kern J; Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts, United States of America.
Varelas X; Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts, United States of America.
Monti S; Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States of America.; Bioinformatics Program, Boston University, Boston, Massachusetts, United States of America.

Pokaż więcej

Źródło:

PLoS computational biology [PLoS Comput Biol] 2023 May 18; Vol. 19 (5), pp. e1011118. Date of Electronic Publication: 2023 May 18 (Print Publication: 2023).

Typ publikacji:

Journal Article; Research Support, N.I.H., Extramural

MeSH Terms:

Gene Regulatory Networks*/genetics
Breast Neoplasms*/genetics
Humans ; Female ; Algorithms

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 43.

Tytuł:

Edge and modular significance assessment in individual-specific networks.

Autorzy:

Melograna F; BIO3 - Laboratory for Systems Medicine, Department of Human Genetics, KU Leuven, Leuven, Belgium. .
Li Z; BIO3 - Laboratory for Systems Medicine, Department of Human Genetics, KU Leuven, Leuven, Belgium.
Galazzo G; School of Nutrition and Translational Research in Metabolism (NUTRIM), Department of Medical Microbiology Infectious Diseases and Infection Prevention, Maastricht University Medical Center+, Maastricht, The Netherlands.
van Best N; Institute of Medical Microbiology, RWTH University Hospital Aachen, RWTH University, Aachen, Germany.; Department of Epidemiology, Care and Public Health Research Institute (CAPHRI), Maastricht University, Maastricht, The Netherlands.
Mommers M; Department of Epidemiology, Care and Public Health Research Institute (CAPHRI), Maastricht University, Maastricht, The Netherlands.
Penders J; School of Nutrition and Translational Research in Metabolism (NUTRIM), Department of Medical Microbiology Infectious Diseases and Infection Prevention, Maastricht University Medical Center+, Maastricht, The Netherlands.; Care and Public Health Research Institute (CAPHRI), Maastricht University, Maastricht, The Netherlands.
Stella F; Department of Informatics, Systems and Communication, University of Milano-Bicocca, 20126, Milan, Italy.
Van Steen K; BIO3 - Laboratory for Systems Medicine, Department of Human Genetics, KU Leuven, Leuven, Belgium.; BIO3 - Laboratory for Systems Genetics, GIGA-R Medical Genomics, University of Liège, Liège, Belgium.

Pokaż więcej

Źródło:

Scientific reports [Sci Rep] 2023 May 15; Vol. 13 (1), pp. 7868. Date of Electronic Publication: 2023 May 15.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Gene Regulatory Networks*
Algorithms*
Humans ; Computer Simulation

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 44.

Tytuł:

Transcriptional diversity in specific synaptic gene sets discriminates cortical neuronal identity.

Autorzy:

Roig Adam A; Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17177, Stockholm, Sweden.; Department of Functional Genomics, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands.
Martínez-López JA; Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17177, Stockholm, Sweden.
van der Spek SJF; Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands.
Sullivan PF; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.; Department of Genetics, University of North Carolina, Chapel Hill, NC, 27599-7264, USA.
Smit AB; Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands.
Verhage M; Department of Functional Genomics, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV, Amsterdam, The Netherlands. .; Functional Genomics Section, Department of Human Genetics, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam University Medical Center (UMC), De Boelelaan 1085, 1081 HV, Amsterdam, The Netherlands. .
Hjerling-Leffler J; Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17177, Stockholm, Sweden. .

Pokaż więcej

Corporate Authors:

SYNGO consortium

Źródło:

Biology direct [Biol Direct] 2023 May 09; Vol. 18 (1), pp. 22. Date of Electronic Publication: 2023 May 09.

Typ publikacji:

Journal Article; Research Support, Non-U.S. Gov't

MeSH Terms:

Brain*
Gene Regulatory Networks*
Animals ; Mice

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 45.

Tytuł:

Genome-Wide Expression Analysis of Long Noncoding RNAs and Their Target Genes in Metafemale Drosophila .

Autorzy:

Liu X; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Yan R; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Liu H; State Key Laboratory of Earth Surface Process and Resource Ecology, College of Life Sciences, Beijing Normal University, Beijing 100875, China.; Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Zhang S; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Wang R; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Zhang B; State Key Laboratory of Earth Surface Process and Resource Ecology, College of Life Sciences, Beijing Normal University, Beijing 100875, China.; Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing 100875, China.
Sun L; Beijing Key Laboratory of Gene Resource and Molecular Development, College of Life Sciences, Beijing Normal University, Beijing 100875, China.; Key Laboratory of Cell Proliferation and Regulation Biology of Ministry of Education, College of Life Science, Beijing Normal University, Beijing 100875, China.

Pokaż więcej

Źródło:

International journal of molecular sciences [Int J Mol Sci] 2023 May 06; Vol. 24 (9). Date of Electronic Publication: 2023 May 06.

Typ publikacji:

Journal Article

MeSH Terms:

Gene Regulatory Networks*
RNA, Long Noncoding*/genetics
RNA, Long Noncoding*/metabolism
Animals ; Drosophila/genetics ; Drosophila/metabolism ; Transcriptome ; Gene Expression Regulation ; Gene Expression Profiling/methods

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 46.

Tytuł:

Computational insights in cell physiology.

Autorzy:

Dupont, Geneviève
Gonze, Didier

Pokaż więcej

Źródło:

Frontiers in Systems Biology. 2024, p01-08. 8p.

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknieSzczegóły

Skocz do pozycji: 47.

Tytuł:

Pungency related gene network in Allium sativum L., response to sulfur treatments.

Autorzy:

Ammarellou, Ali (AUTHOR)

Pokaż więcej

Źródło:

BMC Genomic Data. 3/26/2024, Vol. 25 Issue 1, p1-8. 8p.

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 48.

Tytuł:

Incorporation of the histone variant H2A.Z counteracts gene silencing mediated by H3K27 trimethylation in Fusarium fujikuroi.

Autorzy:

Atanasoff-Kardjalieff, Anna K. (AUTHOR)
Berger, Harald (AUTHOR)
Steinert, Katharina (AUTHOR)
Janevska, Slavica (AUTHOR)
Ponts, Nadia (AUTHOR)
Humpf, Hans-Ulrich (AUTHOR)
Kalinina, Svetlana (AUTHOR)
Studt-Reinhold, Lena (AUTHOR)

Pokaż więcej

Źródło:

Epigenetics & Chromatin. 3/20/2024, Vol. 17 Issue 1, p1-23. 23p.

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 49.

Tytuł:

Integrated analysis of the transcriptome and metabolome reveals the molecular mechanism regulating cotton boll abscission under low light intensity.

Autorzy:

Zhao, Ning (AUTHOR)
Geng, Zhao (AUTHOR)
Zhao, Guiyuan (AUTHOR)
Liu, Jianguang (AUTHOR)
An, Zetong (AUTHOR)
Zhang, Hanshuang (AUTHOR)
Ai, Pengfei (AUTHOR)
Wang, Yongqiang (AUTHOR)

Pokaż więcej

Źródło:

BMC Plant Biology. 3/12/2024, Vol. 24 Issue 1, p1-18. 18p.

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły

Skocz do pozycji: 50.

Tytuł:

Modulation of early gene expression responses to water deprivation stress by the E3 ubiquitin ligase ATL80: implications for retrograde signaling interplay.

Autorzy:

Méndez-Gómez, Manuel (AUTHOR)
Sierra-Cacho, Daniel (AUTHOR)
Jiménez-Morales, Estela (AUTHOR)
Guzmán, Plinio (AUTHOR)

Pokaż więcej

Źródło:

BMC Plant Biology. 3/11/2024, Vol. 24 Issue 1, p1-18. 18p.

Czasopismo naukowe

• na półce

Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły