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Wyszukujesz frazę ""Gene expression"" wg kryterium: Temat


Tytuł :
Chronic Hypersensitivity Pneumonitis, an Interstitial Lung Disease with Distinct Molecular Signatures.
Autorzy :
Furusawa H; Department of Medicine.
Cardwell JH; Department of Medicine.
Okamoto T; Department of Medicine.; Department of Radiology.
Walts AD; Department of Medicine.
Konigsberg IR; Department of Medicine.
Kurche JS; Department of Medicine.
Bang TJ; Department of Pathology, and.
Schwarz MI; Department of Medicine.
Brown KK; Department of Medicine.; Department of Respiratory Medicine, Tokyo Medical and Dental University, Tokyo, Japan.
Kropski JA; National Jewish Health, Denver, Colorado.
Rojas M; Vanderbilt University Medical Center, Nashville, Tennessee.
Cool CD; Department of Respiratory Medicine, Tokyo Medical and Dental University, Tokyo, Japan.; Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania; and.
Lee JS; Department of Medicine.
Wolters PJ; Department of Internal Medicine, University of California, San Francisco, San Francisco, California.
Yang IV; Department of Medicine.
Schwartz DA; Department of Medicine.; Department of Immunology and Microbiology, University of Colorado, Aurora, Colorado.
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Źródło :
American journal of respiratory and critical care medicine [Am J Respir Crit Care Med] 2020 Nov 15; Vol. 202 (10), pp. 1430-1444.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Gene Expression Profiling*
Alveolitis, Extrinsic Allergic/*genetics
Alveolitis, Extrinsic Allergic/*immunology
Idiopathic Pulmonary Fibrosis/*genetics
Idiopathic Pulmonary Fibrosis/*immunology
Lung Diseases, Interstitial/*genetics
Lung Diseases, Interstitial/*immunology
Adult ; Aged ; Aged, 80 and over ; Alveolitis, Extrinsic Allergic/physiopathology ; Female ; Gene Expression ; Humans ; Idiopathic Pulmonary Fibrosis/physiopathology ; Lung Diseases, Interstitial/physiopathology ; Male ; Middle Aged
Czasopismo naukowe
Tytuł :
Functional and transcriptomic analyses of the NF-Y family provide insights into the defense mechanisms of honeybees under adverse circumstances.
Autorzy :
Li G; State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China.
Zhao H; State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China.
Guo H; Statistics Department, University of Auckland, 38 Princes Street, Auckland, New Zealand.
Wang Y; College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China.
Cui X; College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China.
Xu B; College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China. .
Guo X; State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, 271018, Shandong, People's Republic of China. .
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Źródło :
Cellular and molecular life sciences : CMLS [Cell Mol Life Sci] 2020 Dec; Vol. 77 (23), pp. 4977-4995. Date of Electronic Publication: 2020 Feb 03.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Profiling*
Bees/*genetics
Bees/*physiology
CCAAT-Binding Factor/*metabolism
Stress, Physiological/*genetics
Amino Acid Motifs ; Animals ; Antioxidants/pharmacology ; Bees/drug effects ; CCAAT-Binding Factor/chemistry ; CCAAT-Binding Factor/genetics ; Drosophila/genetics ; Gene Expression Regulation/drug effects ; Genome, Insect ; Honey ; Models, Biological ; Oxidative Stress/drug effects ; Phylogeny ; Protein Binding/drug effects ; Protein Structure, Tertiary ; Subcellular Fractions/metabolism ; Time Factors
Czasopismo naukowe
Tytuł :
Transcriptome analysis following enterovirus 71 and coxsackievirus A16 infection in respiratory epithelial cells.
Autorzy :
Song J; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China.; Key Laboratory of Systemic Innovative Research on Virus Vaccine, Chinese Academy of Medical Sciences, Kunming, 650118, China.
Hu Y; Department of Respiratory Medicine, The First People's Hospital of Yunnan Province, Kunming, 650002, China.
Li W; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China.
Li H; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China.
Zheng H; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China.
Chen Y; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China.; Key Laboratory of Systemic Innovative Research on Virus Vaccine, Chinese Academy of Medical Sciences, Kunming, 650118, China.
Dong S; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China. .
Liu L; Yunnan Key Laboratory of Vaccine Research and Development on Severe Infectious Diseases, Institute of Medical Biology, Chinese Academy of Medical Science and Peking Union Medical College, Kunming, 650118, China. .; Key Laboratory of Systemic Innovative Research on Virus Vaccine, Chinese Academy of Medical Sciences, Kunming, 650118, China. .
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Źródło :
Archives of virology [Arch Virol] 2020 Dec; Vol. 165 (12), pp. 2817-2828. Date of Electronic Publication: 2020 Sep 29.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Profiling*
Enterovirus A, Human/*pathogenicity
Epithelial Cells/*virology
Hand, Foot and Mouth Disease/*pathology
Cell Line ; DNA Replication ; Epithelial Cells/physiology ; Gene Expression Regulation ; Hand, Foot and Mouth Disease/virology ; Humans
Czasopismo naukowe
Tytuł :
The novel lncRNA BlackMamba controls the neoplastic phenotype of ALK anaplastic large cell lymphoma by regulating the DNA helicase HELLS.
Autorzy :
Fragliasso V; Laboratory of Translational Research, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.
Verma A; Institute for Computational Biomedicine & Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.; Tri-Institutional Training Program in Computational Biology and Medicine, New York, NY, 10065, USA.
Manzotti G; Laboratory of Translational Research, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.
Tameni A; Laboratory of Translational Research, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.; Clinical and Experimental Medicine PhD Program, University of Modena and Reggio Emilia, Modena, 41125, Italy.
Bareja R; Institute for Computational Biomedicine & Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.
Heavican TB; Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, 68182, USA.
Iqbal J; Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, 68182, USA.
Wang R; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, 10065, USA.
Fiore D; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, 10065, USA.
Mularoni V; Laboratory of Translational Research, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.
Chan WC; Department of Pathology, City of Hope National Medical Center, Duarte, CA, 91010, USA.
Lhoumaud P; Department of Pathology, New York University School of Medicine, Langone Medical Center, New York, NY, 10016, USA.
Skok J; Department of Pathology, New York University School of Medicine, Langone Medical Center, New York, NY, 10016, USA.
Zanetti E; Pathology Unit, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.
Merli F; Hematology Unit, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy.
Ciarrocchi A; Laboratory of Translational Research, Azienda USL-IRCCS di Reggio Emilia, Reggio Emilia, 42123, Italy. .
Elemento O; Institute for Computational Biomedicine & Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, 10021, USA. .
Inghirami G; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, 10065, USA. .
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Źródło :
Leukemia [Leukemia] 2020 Nov; Vol. 34 (11), pp. 2964-2980. Date of Electronic Publication: 2020 Mar 02.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Phenotype*
RNA, Long Noncoding*
Anaplastic Lymphoma Kinase/*deficiency
DNA Helicases/*genetics
Lymphoma, Large-Cell, Anaplastic/*genetics
Lymphoma, Large-Cell, Anaplastic/*pathology
Biopsy ; Cell Line, Tumor ; Cell Proliferation ; Clonal Evolution ; Gene Expression Profiling ; Gene Silencing ; Humans ; MicroRNAs/genetics ; Models, Biological ; Promoter Regions, Genetic ; RNA Interference
Czasopismo naukowe
Tytuł :
Kidney Tertiary Lymphoid Structures in Lupus Nephritis Develop into Large Interconnected Networks and Resemble Lymph Nodes in Gene Signature.
Autorzy :
Dorraji SE; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Kanapathippillai P; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Hovd AK; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Stenersrød MR; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Horvei KD; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Ursvik A; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Figenschau SL; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Thiyagarajan D; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Fenton CG; Genomic Support Center, Department of Clinical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromso, Norway.
Pedersen HL; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway.
Fenton KA; RNA and Molecular Pathology Research Group, Department of Medical Biology, Faculty of Health Science, UiT Arctic University of Norway, Tromsø, Norway. Electronic address: .
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Źródło :
The American journal of pathology [Am J Pathol] 2020 Nov; Vol. 190 (11), pp. 2203-2225. Date of Electronic Publication: 2020 Aug 17.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Dendritic Cells*/metabolism
Dendritic Cells*/pathology
Gene Expression Regulation*
Kidney*/metabolism
Kidney*/pathology
Lupus Nephritis*/metabolism
Lupus Nephritis*/pathology
Lymph Nodes*/metabolism
Lymph Nodes*/pathology
Animals ; Gene Expression Profiling ; Mice
Czasopismo naukowe
Tytuł :
Double hit viral parasitism, polymicrobial CNS residency and perturbed proteostasis in Alzheimer's disease: A data driven, in silico analysis of gene expression data.
Autorzy :
Vavougios GD; Department of Neurology, Athens Naval Hospital, P.C. 115 21, Athens, Greece; Department of Respiratory Medicine, Faculty of Medicine, University of Thessaly, Biopolis, P.C, 41500, Larissa, Greece; Department of Computer Science and Telecommunications, University of Thessaly, Papasiopoulou 2 - 4, P.C. 35 131 Galaneika, Lamia, Greece. Electronic address: .
Nday C; Laboratory of Medical Physics, Faculty of Health Sciences, School of Medicine, Aristotle University of Thessaloniki, P.C. 5414, Thessaloniki, Greece.
Pelidou SH; Department of Neurology, Faculty of Medicine, University of Ioannina, P.C. 45110, Ioannina, Greece.
Zarogiannis SG; Department of Physiology, Faculty of Medicine, School of Health Sciences, University of Thessaly, BIOPOLIS, Larissa, 41500, Greece.
Gourgoulianis KI; Department of Respiratory Medicine, Faculty of Medicine, University of Thessaly, Biopolis, P.C, 41500, Larissa, Greece.
Stamoulis G; Department of Electrical and Computer Engineering, University of Thessaly, 37 Glavani - 28th October Str, Deligiorgi Building, 4th floor, P.C. 382 21, Volos, Greece.
Doskas T; Department of Neurology, Athens Naval Hospital, P.C. 115 21, Athens, Greece.
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Źródło :
Molecular immunology [Mol Immunol] 2020 Nov; Vol. 127, pp. 124-135. Date of Electronic Publication: 2020 Sep 21.
Typ publikacji :
Journal Article
MeSH Terms :
Computer Simulation*
Gene Expression Regulation*
Alzheimer Disease/*genetics
Alzheimer Disease/*virology
Central Nervous System/*virology
Coinfection/*complications
Parasites/*physiology
Proteostasis/*genetics
Alzheimer Disease/microbiology ; Animals ; Central Nervous System/immunology ; Entorhinal Cortex/pathology ; Gene Expression Profiling ; Gene Ontology ; Humans ; Nerve Tissue Proteins/metabolism ; Neurofibrillary Tangles/pathology ; Oligopeptides/metabolism ; Protein Interaction Maps ; Software
Czasopismo naukowe
Tytuł :
A de novo transcriptome analysis revealed that photomorphogenic genes are required for carotenoid synthesis in the dark-grown carrot taproot.
Autorzy :
Arias D; Facultad de Ciencias, Centro de Biología Molecular Vegetal, Universidad de Chile, Las Palmeras, 3425, Ñuñoa, Santiago, Chile.
Maldonado J; Laboratorio de Genómica Funcional & Bioinformática, Facultad de Ciencias Agronómicas, Universidad de Chile, Av. Santa Rosa 11315, 8820808, La Pintana, Santiago, Chile.
Silva H; Laboratorio de Genómica Funcional & Bioinformática, Facultad de Ciencias Agronómicas, Universidad de Chile, Av. Santa Rosa 11315, 8820808, La Pintana, Santiago, Chile.
Stange C; Facultad de Ciencias, Centro de Biología Molecular Vegetal, Universidad de Chile, Las Palmeras, 3425, Ñuñoa, Santiago, Chile. .
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Źródło :
Molecular genetics and genomics : MGG [Mol Genet Genomics] 2020 Nov; Vol. 295 (6), pp. 1379-1392. Date of Electronic Publication: 2020 Jul 12.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Plant*
Biosynthetic Pathways/*genetics
Carotenoids/*metabolism
Computational Biology/*methods
Daucus carota/*genetics
Daucus carota/*metabolism
Plant Proteins/*metabolism
Daucus carota/growth & development ; Gene Expression Profiling ; Pigmentation ; Plant Proteins/genetics
Czasopismo naukowe
Tytuł :
Behavioral state coding by molecularly defined paraventricular hypothalamic cell type ensembles.
Autorzy :
Xu S; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA. .
Yang H; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.; Dominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Menon V; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Lemire AL; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Wang L; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Henry FE; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Turaga SC; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Sternson SM; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA. .
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Źródło :
Science (New York, N.Y.) [Science] 2020 Oct 16; Vol. 370 (6514).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Behavior, Animal*
Gene Expression*
Calcium/*metabolism
Paraventricular Hypothalamic Nucleus/*metabolism
RNA/*metabolism
Animals ; Gene Expression Profiling ; Genetic Markers ; Male ; Mice ; Neurons/metabolism ; RNA-Seq ; Receptors, Neuropeptide Y/genetics ; Single-Cell Analysis
Czasopismo naukowe
Tytuł :
Novel mechanistic targets of forkhead box Q1 transcription factor in human breast cancer cells.
Autorzy :
Kim SH; Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Hahm ER; Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Singh KB; Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
Singh SV; Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.; UPMC Hillman Cancer Center, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania.
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Źródło :
Molecular carcinogenesis [Mol Carcinog] 2020 Oct; Vol. 59 (10), pp. 1116-1128. Date of Electronic Publication: 2020 Aug 05.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Biomarkers, Tumor/*metabolism
Breast Neoplasms/*pathology
Forkhead Transcription Factors/*metabolism
Apoptosis ; Biomarkers, Tumor/genetics ; Breast Neoplasms/genetics ; Breast Neoplasms/metabolism ; Cell Cycle ; Cell Movement ; Cell Proliferation ; Female ; Forkhead Transcription Factors/genetics ; Gene Expression Profiling ; Humans ; Interleukin-1alpha/genetics ; Interleukin-1alpha/metabolism ; Interleukin-8/genetics ; Interleukin-8/metabolism ; Prognosis ; Tumor Cells, Cultured ; Vascular Endothelial Growth Factor A/genetics ; Vascular Endothelial Growth Factor A/metabolism
Czasopismo naukowe
Tytuł :
eQTL Colocalization Analyses Identify NTN4 as a Candidate Breast Cancer Risk Gene.
Autorzy :
Beesley J; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia. Electronic address: .
Sivakumaran H; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Moradi Marjaneh M; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Shi W; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Hillman KM; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Kaufmann S; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Hussein N; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia; Faculty of Medicine, The University of Queensland, Brisbane, QLD 4006, Australia.
Kar S; MRC Integrative Epidemiology Unit, University of Bristol, Bristol, UK; Population Health Sciences, Bristol Medical School, University of Bristol, Bristol, UK.
Lima LG; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Ham S; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Möller A; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia; Faculty of Medicine, The University of Queensland, Brisbane, QLD 4006, Australia.
Chenevix-Trench G; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
Edwards SL; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia. Electronic address: .
French JD; Cancer Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD 4029, Australia.
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Źródło :
American journal of human genetics [Am J Hum Genet] 2020 Oct 01; Vol. 107 (4), pp. 778-787. Date of Electronic Publication: 2020 Aug 31.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Genetic Predisposition to Disease*
Breast Neoplasms/*genetics
Neoplasm Proteins/*genetics
Netrins/*genetics
Alleles ; Animals ; Breast Neoplasms/diagnosis ; Breast Neoplasms/pathology ; Cell Line, Tumor ; Enhancer Elements, Genetic ; Female ; Gene Expression Profiling ; Genome-Wide Association Study ; Genomics/methods ; Heterografts ; Humans ; MCF-7 Cells ; Mice ; Mice, Nude ; Neoplasm Proteins/metabolism ; Netrins/metabolism ; Phenotype ; Quantitative Trait Loci ; Risk
Czasopismo naukowe
Tytuł :
Evaluating the efficacy of multiple myeloma cell lines as models for patient tumors via transcriptomic correlation analysis.
Autorzy :
Sarin V; Department of Laboratory Medicine, University of California, San Francisco, CA, USA.
Yu K; Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA.
Ferguson ID; Department of Laboratory Medicine, University of California, San Francisco, CA, USA.
Gugliemini O; Department of Laboratory Medicine, University of California, San Francisco, CA, USA.
Nix MA; Department of Laboratory Medicine, University of California, San Francisco, CA, USA.
Hann B; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA.
Sirota M; Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA.; Department of Pediatrics, University of California, San Francisco, CA, USA.
Wiita AP; Department of Laboratory Medicine, University of California, San Francisco, CA, USA. .; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA, USA. .
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Źródło :
Leukemia [Leukemia] 2020 Oct; Vol. 34 (10), pp. 2754-2765. Date of Electronic Publication: 2020 Mar 02.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Profiling*
Transcriptome*
Multiple Myeloma/*genetics
Animals ; Cell Line, Tumor ; Disease Models, Animal ; Gene Expression Regulation, Neoplastic ; Genomics/methods ; Humans ; Immunophenotyping ; Mice ; Multiple Myeloma/metabolism ; Multiple Myeloma/mortality ; Mutation ; Prognosis ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
Gene expression profiling of fibroblasts in a family with LMNA-related cardiomyopathy reveals molecular pathways implicated in disease pathogenesis.
Autorzy :
Widyastuti HP; UCI Cardiogenomics Program, Department of Pediatrics, Division of Genetics & Genomics and Department of Biological Chemistry, University of California, Irvine, School of Medicine, 2042 Hewitt Hall, Irvine, CA, 92697-3940, USA.
Norden-Krichmar TM; Department of Epidemiology, University of California, Irvine, School of Medicine, 3062 Anteater Instruction and Research Building, Irvine, CA, 92697-7550, USA. .
Grosberg A; Department of Biomedical Engineering and The Edwards Lifesciences Center for Advanced Cardiovascular Technology, University of California, Irvine, Irvine, California, USA.
Zaragoza MV; UCI Cardiogenomics Program, Department of Pediatrics, Division of Genetics & Genomics and Department of Biological Chemistry, University of California, Irvine, School of Medicine, 2042 Hewitt Hall, Irvine, CA, 92697-3940, USA. .
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Źródło :
BMC medical genetics [BMC Med Genet] 2020 Jul 22; Vol. 21 (1), pp. 152. Date of Electronic Publication: 2020 Jul 22.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Gene Expression Profiling*
Cardiomyopathies/*genetics
Fibroblasts/*metabolism
Fibroblasts/*pathology
Lamin Type A/*genetics
Signal Transduction/*genetics
Base Sequence ; Family ; Gene Expression Regulation ; Humans ; MAP Kinase Signaling System/genetics ; Nuclear Lamina/metabolism
Czasopismo naukowe
Tytuł :
Network aggregation improves gene function prediction of grapevine gene co-expression networks.
Autorzy :
Wong DCJ; Ecology and Evolution, Research School of Biology, The Australian National University, Acton, ACT, 2601, Australia. .
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Źródło :
Plant molecular biology [Plant Mol Biol] 2020 Jul; Vol. 103 (4-5), pp. 425-441. Date of Electronic Publication: 2020 Apr 07.
Typ publikacji :
Journal Article; Meta-Analysis
MeSH Terms :
Gene Expression Regulation, Plant*/genetics
Gene Expression Regulation, Plant*/physiology
Gene Regulatory Networks*
Phenotype*
Genome, Plant/*genetics
Plant Proteins/*genetics
Vitis/*genetics
Gene Expression Profiling ; Genes, Plant/genetics ; Plant Proteins/metabolism ; RNA-Seq ; Transcriptome
Czasopismo naukowe
Tytuł :
Comprehensive analysis of two potential novel SARS-CoV-2 entries, TMPRSS2 and IFITM3, in healthy individuals and cancer patients.
Autorzy :
Dai YJ; Collaborative Innovation Center for Cancer Medicine, 651 Dongfeng East Road, Guangzhou, 510060, China.; State Key Laboratory of Oncology in South China, Guangzhou, 510060, China.; Department of Hematologic Oncology, Sun Yat-sen University Cancer Center, Guangzhou, 510060, China.
Zhang WN; Department of Hematology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, 510623, China.
Wang WD; Collaborative Innovation Center for Cancer Medicine, 651 Dongfeng East Road, Guangzhou, 510060, China.; State Key Laboratory of Oncology in South China, Guangzhou, 510060, China.; Department of Hematologic Oncology, Sun Yat-sen University Cancer Center, Guangzhou, 510060, China.
He SY; The University of Texas MD Anderson Cancer Center UTHealth Graduate School of Biomedical Sciences, Houston, TX 77030, USA.
Liang CC; Collaborative Innovation Center for Cancer Medicine, 651 Dongfeng East Road, Guangzhou, 510060, China.; State Key Laboratory of Oncology in South China, Guangzhou, 510060, China.
Wang DW; National Research Center for Translational Medicine, Ruijin Hospital affiliated to Shanghai Jiao Tong University School of Medicine, 197, Ruijin Road II, Shanghai, 200025, China.
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Źródło :
International journal of biological sciences [Int J Biol Sci] 2020 Sep 30; Vol. 16 (15), pp. 3028-3036. Date of Electronic Publication: 2020 Sep 30 (Print Publication: 2020).
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Membrane Proteins/*physiology
Neoplasms/*metabolism
RNA-Binding Proteins/*physiology
Receptors, Virus/*physiology
Serine Endopeptidases/*physiology
Betacoronavirus ; Coronavirus Infections/genetics ; Coronavirus Infections/metabolism ; DNA Mutational Analysis ; Gene Expression Regulation ; Healthy Volunteers ; Humans ; Membrane Proteins/genetics ; Neoplasms/diagnosis ; Neoplasms/genetics ; Pandemics ; Peptidyl-Dipeptidase A/metabolism ; Pneumonia, Viral/genetics ; Pneumonia, Viral/metabolism ; Prognosis ; RNA-Binding Proteins/genetics ; Receptors, Virus/genetics ; Serine Endopeptidases/genetics ; Tissue Distribution
SCR Disease Name :
COVID-19
Czasopismo naukowe
Tytuł :
Transcriptome profiling helps to elucidate the mechanisms of ripening and epidermal senescence in passion fruit (Passiflora edulia Sims).
Autorzy :
Li C; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Xin M; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Li L; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
He X; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Liu G; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Li J; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Sheng J; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
Sun J; Institute of Agricultural Products Processing, Guangxi Academy of Agricultural Sciences, Guangxi, Nangning, China.; Guangxi Key Laboratory of New Technologies for Storage and Processing of Fruits and Vegetables, Guangxi, Nanning, China.
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Źródło :
PloS one [PLoS One] 2020 Sep 25; Vol. 15 (9), pp. e0236535. Date of Electronic Publication: 2020 Sep 25 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Plant*
Transcriptome*
Passiflora/*genetics
Passiflora/*growth & development
Cyclopropanes/metabolism ; Fruit/genetics ; Fruit/growth & development ; Gene Expression Profiling ; Passiflora/metabolism ; Plant Growth Regulators/metabolism ; Plant Proteins/genetics ; Plant Proteins/metabolism
Czasopismo naukowe
Tytuł :
Inference and multiscale model of epithelial-to-mesenchymal transition via single-cell transcriptomic data.
Autorzy :
Sha Y; Department of Mathematics, University of California, Irvine, Irvine, CA 92697, USA.; The NSF-Simons Center for Multiscale Cell Fate Research, University of California, Irvine, Irvine, CA 92697, USA.
Wang S; Department of Mathematics, University of California, Irvine, Irvine, CA 92697, USA.
Zhou P; Department of Mathematics, University of California, Irvine, Irvine, CA 92697, USA.
Nie Q; Department of Mathematics, University of California, Irvine, Irvine, CA 92697, USA.; The NSF-Simons Center for Multiscale Cell Fate Research, University of California, Irvine, Irvine, CA 92697, USA.; Department of Developmental and Cell Biology, University of California, Irvine, Irvine, CA 92697, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Sep 25; Vol. 48 (17), pp. 9505-9520.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Gene Expression Profiling*
Gene Regulatory Networks*
Models, Biological*
Embryonic Stem Cells/*pathology
Epithelial-Mesenchymal Transition/*physiology
Animals ; Cell Differentiation ; Embryonic Stem Cells/cytology ; Embryonic Stem Cells/physiology ; Epithelial-Mesenchymal Transition/genetics ; Gene Expression Regulation, Neoplastic ; Head and Neck Neoplasms/genetics ; Head and Neck Neoplasms/pathology ; Humans ; Mice ; Single-Cell Analysis ; Skin Neoplasms/genetics ; Skin Neoplasms/pathology ; Squamous Cell Carcinoma of Head and Neck/genetics ; Squamous Cell Carcinoma of Head and Neck/pathology
Czasopismo naukowe
Tytuł :
Comparative transcriptome analysis uncovers different heat stress responses in heat-resistant and heat-sensitive jujube cultivars.
Autorzy :
Jin J; Institute of Horticultural crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Yang L; Institute of Horticultural crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Fan D; Institute of Horticultural crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Liu X; Xinjiang Agricultural Vocational Technical College, Changji, China.
Hao Q; Institute of Horticultural crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
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Źródło :
PloS one [PLoS One] 2020 Sep 21; Vol. 15 (9), pp. e0235763. Date of Electronic Publication: 2020 Sep 21 (Print Publication: 2020).
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Plant*
Heat-Shock Response*
Transcriptome*
Ziziphus/*genetics
Gene Expression Profiling ; Plant Proteins/genetics ; Plant Proteins/metabolism ; Ziziphus/growth & development ; Ziziphus/physiology
Czasopismo naukowe
Tytuł :
MicroRNA expression profiling and target gene analysis in gastric cancer.
Autorzy :
Xu C; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.; Department of Gastroenterology, People's Hospital of Longhua District, Shenzhen.
Xie J; Research Lab of translational medicine.; Institute of Pharmacy and Pharmacology, Hengyang Medical College, University of South China, Hengyang.
Liu Y; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.
Tang F; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.
Long Z; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.
Wang Y; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.
Luo J; Department of Ultrasonography, the Sixth Affiliated Hospital of Guangzhou Medical University, Qingyuan People's Hospital, Qingyuan, China.
Li J; Department of Gastroenterology, People's Hospital of Longhua District, Shenzhen.
Li G; Department of Gastroenterology, the Second Affiliated Hospital, University of South China, Hengyang.
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Źródło :
Medicine [Medicine (Baltimore)] 2020 Sep 11; Vol. 99 (37), pp. e21963.
Typ publikacji :
Journal Article; Observational Study
MeSH Terms :
Gene Expression Profiling*
MicroRNAs/*genetics
Stomach Neoplasms/*diagnosis
Stomach Neoplasms/*genetics
Down-Regulation ; Gene Expression Regulation, Neoplastic ; Humans ; Real-Time Polymerase Chain Reaction ; Up-Regulation
Czasopismo naukowe
Tytuł :
High accuracy gene expression profiling of sorted cell subpopulations from breast cancer PDX model tissue.
Autorzy :
Porter W; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Snowden E; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Hahn F; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Ferguson M; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Tong F; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Dillmore WS; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
Blaesius R; BD Technologies and Innovation, Research Triangle Park, NC, United States of America.
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Źródło :
PloS one [PLoS One] 2020 Sep 10; Vol. 15 (9), pp. e0238594. Date of Electronic Publication: 2020 Sep 10 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Transcriptome*
Triple Negative Breast Neoplasms/*genetics
Animals ; Disease Models, Animal ; Female ; Flow Cytometry ; Gene Expression Profiling ; Humans ; Mice, Inbred NOD ; Mice, SCID ; Triple Negative Breast Neoplasms/pathology ; Xenograft Model Antitumor Assays
Czasopismo naukowe
Tytuł :
Mining topoisomerase isoforms in gastric cancer.
Autorzy :
Hou G; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Deng J; Department of Respiratory, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
You X; The First Department of Chemotherapy, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China.
Chen J; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Jiang Y; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Qian T; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Bi Y; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Song B; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Xu Y; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China.
Yang X; Department of Oncology, The First Hospital of Jiaxing, Affiliated Hospital of Jiaxing University, Jiaxing, Zhejiang, China. Electronic address: .
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Źródło :
Gene [Gene] 2020 Sep 05; Vol. 754, pp. 144859. Date of Electronic Publication: 2020 Jun 11.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Expression Regulation, Neoplastic*
Adenocarcinoma/*pathology
Biomarkers, Tumor/*metabolism
DNA Topoisomerases, Type II/*metabolism
Poly-ADP-Ribose Binding Proteins/*metabolism
Stomach Neoplasms/*pathology
Adenocarcinoma/enzymology ; Biomarkers, Tumor/genetics ; DNA Topoisomerases, Type II/genetics ; Enzyme Precursors ; Gene Expression Profiling ; Humans ; Poly-ADP-Ribose Binding Proteins/genetics ; Prognosis ; Stomach Neoplasms/enzymology ; Survival Rate
Czasopismo naukowe

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