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Tytuł :
A 16-plex Y-SNP typing system based on allele-specific PCR for the genotyping of Chinese Y-chromosomal haplogroups.
Autorzy :
Zhou Z; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Zhou Y; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Yao Y; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Qian J; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Liu B; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Yang Q; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Shao C; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Li H; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China; Shanghai Key Laboratory of Crime Scene Evidence, Shanghai Research Institute of Criminal Science and Technology, Shanghai 200083, China.
Sun K; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Tang Q; Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China.
Xie J; Department of Forensic Medicine, School of Basic Medical Sciences, Fudan University, Shanghai 200032, China. Electronic address: .
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Źródło :
Legal medicine (Tokyo, Japan) [Leg Med (Tokyo)] 2020 Sep; Vol. 46, pp. 101720. Date of Electronic Publication: 2020 May 30.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier Science Ireland Ltd Country of Publication: Ireland NLM ID: 100889186 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-4162 (Electronic) Linking ISSN: 13446223 NLM ISO Abbreviation: Leg Med (Tokyo) Subsets: MEDLINE
MeSH Terms :
Alleles*
Genotyping Techniques*
Haplotypes*
Polymerase Chain Reaction*
Chromosomes, Human, Y/*genetics
Polymorphism, Single Nucleotide/*genetics
Asian Continental Ancestry Group/genetics ; Female ; Humans ; Male
Czasopismo naukowe
Tytuł :
High accuracy of pooled DNA genotyping by 2b-RAD sequencing in the Pacific white shrimp, Litopenaeus vannamei.
Autorzy :
Sui J; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Luan S; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Dai P; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Fu Q; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Meng X; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Luo K; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Cao B; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
Kong J; Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.; Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
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Źródło :
PloS one [PLoS One] 2020 Jul 30; Vol. 15 (7), pp. e0236343. Date of Electronic Publication: 2020 Jul 30 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS ONE Subsets: MEDLINE
MeSH Terms :
Genotyping Techniques*
High-Throughput Nucleotide Sequencing*
Restriction Mapping*
DNA/*genetics
Penaeidae/*genetics
Alleles ; Animals ; Gene Frequency/genetics ; Genetics, Population ; Polymorphism, Single Nucleotide/genetics ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
A cost-effective approach to DNA methylation detection by Methyl Sensitive DArT sequencing.
Autorzy :
Pereira WJ; Department of Cell Biology, University of Brasília, Brasília, Distrito Federal, Brazil.
Pappas MCR; Embrapa Genetic Resources and Biotechnology, Brasília, Distrito Federal, Brazil.
Grattapaglia D; Embrapa Genetic Resources and Biotechnology, Brasília, Distrito Federal, Brazil.; Universidade Católica de Brasília, Brasília, Distrito Federal, Brazil.
Pappas GJ Jr; Department of Cell Biology, University of Brasília, Brasília, Distrito Federal, Brazil.
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Źródło :
PloS one [PLoS One] 2020 Jun 04; Vol. 15 (6), pp. e0233800. Date of Electronic Publication: 2020 Jun 04 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS ONE Subsets: MEDLINE
MeSH Terms :
Cost-Benefit Analysis*
DNA Methylation/*genetics
Eucalyptus/*genetics
Genotyping Techniques/*methods
High-Throughput Nucleotide Sequencing/*methods
Plant Leaves/*genetics
Sequence Analysis, DNA/*methods
Trees/*genetics
Chromosomes, Plant/genetics ; DNA Restriction Enzymes/genetics ; DNA Transposable Elements/genetics ; Genes, Plant/genetics ; Genotyping Techniques/economics ; High-Throughput Nucleotide Sequencing/economics ; Pilot Projects ; Reproducibility of Results ; Restriction Mapping ; Sequence Analysis, DNA/economics ; Sulfites/pharmacology
Czasopismo naukowe
Tytuł :
Performance of Genotype MTBDRsl V2.0 over the Genotype MTBDRsl V1 for detection of second line drug resistance: An Indian perspective.
Autorzy :
Rufai SB; Division of Clinical Microbiology and Molecular Medicine, Department of Laboratory Medicine, All India Institute of Medical Sciences, New Delhi, India.; Department of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Umay K; Department of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Singh PK; Department of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
Singh S; Division of Clinical Microbiology and Molecular Medicine, Department of Laboratory Medicine, All India Institute of Medical Sciences, New Delhi, India.; Department of Microbiology, All India Institute of Medical Sciences, Bhopal, India.
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Źródło :
PloS one [PLoS One] 2020 Mar 04; Vol. 15 (3), pp. e0229419. Date of Electronic Publication: 2020 Mar 04 (Print Publication: 2020).
Typ publikacji :
Comparative Study; Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS ONE Subsets: MEDLINE
MeSH Terms :
Genotyping Techniques*
Drug Resistance, Bacterial/*genetics
Tuberculosis, Multidrug-Resistant/*genetics
Humans ; India ; Retrospective Studies
Czasopismo naukowe
Tytuł :
Simple Protocol for Generating and Genotyping Genome-Edited Mice With CRISPR-Cas9 Reagents.
Autorzy :
Fernández A; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Morín M; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.; Servicio de Genética, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
Muñoz-Santos D; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Josa S; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Montero A; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Rubio-Fernández M; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Cantero M; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Fernández J; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
Del Hierro MJ; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.
Castrillo M; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.
Moreno-Pelayo MÁ; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.; Servicio de Genética, Ramón y Cajal University Hospital, IRYCIS, Madrid, Spain.
Montoliu L; National Centre for Biotechnology (CNB), CSIC, Madrid, Spain.; CIBER of Rare Diseases (CIBERER), ISCIII, Madrid, Spain.
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Źródło :
Current protocols in mouse biology [Curr Protoc Mouse Biol] 2020 Mar; Vol. 10 (1), pp. e69.
Typ publikacji :
Journal Article
Journal Info :
Publisher: John Wiley & Sons Country of Publication: United States NLM ID: 101560384 Publication Model: Print Cited Medium: Internet ISSN: 2161-2617 (Electronic) Linking ISSN: 21612617 NLM ISO Abbreviation: Curr Protoc Mouse Biol Subsets: MEDLINE
MeSH Terms :
CRISPR-Cas Systems*
Models, Animal*
Gene Editing/*methods
Genotyping Techniques/*methods
Animals ; Genotyping Techniques/instrumentation ; Indicators and Reagents ; Mice ; Mice, Transgenic
Czasopismo naukowe
Tytuł :
The relevance of molecular genotyping to allocate cases in a suspected outbreak of Legionella pneumonia in patients with prolonged immunosuppressive therapy.
Autorzy :
Borella P; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy. Electronic address: .
Vecchi E; Hospital Hygiene, University Hospital, Modena, Italy.
Incerti F; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy.
Marchesi I; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy.
Meacci M; Unit of Clinical Microbiology, University Hospital, Modena, Italy.
Frezza G; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy.
Fregni Serpini G; Unit of Virology and Molecular Microbiology, University Hospital, Modena, Italy.
Mansi A; INAIL Research Area, Department of Occupational and Environmental Medicine, Epidemiology and Hygiene, Monte Porzio Catone, Rome, Italy.
Paduano S; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy.
Bargellini A; Department of Biomedical, Metabolic and Neural Sciences, Section of Public Health, University of Modena and Reggio Emilia, Modena, Italy.
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Źródło :
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases [Int J Infect Dis] 2020 Feb; Vol. 91, pp. 174-176. Date of Electronic Publication: 2019 Nov 07.
Typ publikacji :
Case Reports
Journal Info :
Publisher: Elsevier Country of Publication: Canada NLM ID: 9610933 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-3511 (Electronic) Linking ISSN: 12019712 NLM ISO Abbreviation: Int. J. Infect. Dis. Subsets: MEDLINE
MeSH Terms :
Genotyping Techniques*
Legionella pneumophila/*isolation & purification
Legionnaires' Disease/*microbiology
Aged ; Aged, 80 and over ; Cross Infection/microbiology ; Disease Outbreaks ; Female ; Humans ; Immunosuppression ; Legionella pneumophila/classification ; Legionella pneumophila/genetics ; Legionnaires' Disease/epidemiology ; Legionnaires' Disease/therapy ; Male ; Middle Aged ; Molecular Typing ; Serogroup
Raport
Tytuł :
Genotyping genetic markers from LCN and degraded DNA by HRM and their application in hair shaft.
Autorzy :
Jiang E; Department of Forensic Genetics and Biology, School of Forensic Medicine, China Medical University, No.77 Puhe Road, Shenyang North New Area, Shenyang, 110122, People's Republic of China.
Zhang S; Department of Forensic Genetics and Biology, School of Forensic Medicine, China Medical University, No.77 Puhe Road, Shenyang North New Area, Shenyang, 110122, People's Republic of China.
Pang H; Department of Forensic Genetics and Biology, School of Forensic Medicine, China Medical University, No.77 Puhe Road, Shenyang North New Area, Shenyang, 110122, People's Republic of China. .
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Źródło :
International journal of legal medicine [Int J Legal Med] 2020 Jan; Vol. 134 (1), pp. 31-37. Date of Electronic Publication: 2019 May 06.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Springer International Country of Publication: Germany NLM ID: 9101456 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1437-1596 (Electronic) Linking ISSN: 09379827 NLM ISO Abbreviation: Int. J. Legal Med. Subsets: MEDLINE
MeSH Terms :
Genetic Markers*
Genotyping Techniques*
Nucleic Acid Amplification Techniques*
DNA/*analysis
Hair/*chemistry
Female ; Humans ; Male ; Polymorphism, Single Nucleotide ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains.
Autorzy :
Cochard T; ISP, INRA, Université de Tours, UMR 1282, 37380 Nouzilly, France.
Branger M; ISP, INRA, Université de Tours, UMR 1282, 37380 Nouzilly, France.
Supply P; INSERM U1019, F-59019 Lille Cedex, France; CNRS UMR 8204, F-59019, Lille Cedex, France; Institut Pasteur de Lille, France; Univ Lille Nord de France, F-59019 Lille Cedex, France.
Sreevatsan S; Department of Pathobiology and Diagnostic Investigation, Michigan State University, East Lansing 48824, USA.
Biet F; ISP, INRA, Université de Tours, UMR 1282, 37380 Nouzilly, France. Electronic address: .
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Źródło :
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [Infect Genet Evol] 2020 Jan; Vol. 77, pp. 104075. Date of Electronic Publication: 2019 Oct 18.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Elsevier Science Country of Publication: Netherlands NLM ID: 101084138 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1567-7257 (Electronic) Linking ISSN: 15671348 NLM ISO Abbreviation: Infect. Genet. Evol. Subsets: MEDLINE
MeSH Terms :
Computational Biology/*methods
Genotyping Techniques/*standards
Mycobacterium avium Complex/*classification
Genetic Markers ; Genotyping Techniques/methods ; Internet ; Microsatellite Repeats ; Minisatellite Repeats ; Multilocus Sequence Typing/methods ; Multilocus Sequence Typing/standards ; Mycobacterium avium Complex/genetics ; Mycobacterium avium subsp. paratuberculosis/classification ; Mycobacterium avium subsp. paratuberculosis/genetics ; Software
Czasopismo naukowe
Tytuł :
Multiplex restriction amplicon sequencing: a novel next-generation sequencing-based marker platform for high-throughput genotyping.
Autorzy :
Bernardo A; Department of Plant Pathology, Kansas State University, Manhattan, KS, USA.; Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, USA.
St Amand P; Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, USA.
Le HQ; Department of Plant Pathology, Kansas State University, Manhattan, KS, USA.
Su Z; Department of Agronomy, Kansas State University, Manhattan, KS, USA.; China Agricultural University, Beijing, China.
Bai G; Hard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, USA.; Department of Agronomy, Kansas State University, Manhattan, KS, USA.
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Źródło :
Plant biotechnology journal [Plant Biotechnol J] 2020 Jan; Vol. 18 (1), pp. 254-265. Date of Electronic Publication: 2019 Jul 23.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info :
Publisher: Wiley on behalf of the Society for Experimental Biology, Association of Applied Biologists Country of Publication: England NLM ID: 101201889 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1467-7652 (Electronic) Linking ISSN: 14677644 NLM ISO Abbreviation: Plant Biotechnol. J. Subsets: MEDLINE
MeSH Terms :
Genotyping Techniques*
High-Throughput Nucleotide Sequencing*
Quantitative Trait Loci*
Triticum/*genetics
Chromosome Mapping ; Genetic Linkage ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł :
Fetal RHD detection from circulating cell-free fetal DNA in maternal plasma: validation of a diagnostic kit using automatic extraction and frozen DNA.
Autorzy :
Londero D; Department of Transfusion Medicine, ASUI-Udine, Udine, Italy.
Stampalija T; Unit of Fetal Medicine and Prenatal Diagnosis, Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
Bolzicco D; Department of Transfusion Medicine, ASUI-Udine, Udine, Italy.
Castro Silva E; Unit of Fetal Medicine and Prenatal Diagnosis, Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
Candolini M; Department of Transfusion Medicine, ASUI-Udine, Udine, Italy.
Cortivo C; Unit of Fetal Medicine and Prenatal Diagnosis, Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
Dreossi C; Department of Transfusion Medicine, ASUI-Udine, Udine, Italy.
Fantasia I; Unit of Fetal Medicine and Prenatal Diagnosis, Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
Pecile V; Unit of Fetal Medicine and Prenatal Diagnosis, Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Trieste, Italy.
De Angelis V; Department of Transfusion Medicine, ASUI-Udine, Udine, Italy.
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Źródło :
Transfusion medicine (Oxford, England) [Transfus Med] 2019 Dec; Vol. 29 (6), pp. 408-414. Date of Electronic Publication: 2019 Jun 17.
Typ publikacji :
Clinical Trial; Journal Article; Multicenter Study; Validation Study
Journal Info :
Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 9301182 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-3148 (Electronic) Linking ISSN: 09587578 NLM ISO Abbreviation: Transfus Med Subsets: MEDLINE
MeSH Terms :
Cryopreservation*
Fetus*
Genotyping Techniques*
Plasma*
Prenatal Diagnosis*
Reagent Kits, Diagnostic*
Cell-Free Nucleic Acids/*genetics
Rh-Hr Blood-Group System/*genetics
Cell-Free Nucleic Acids/blood ; Cell-Free Nucleic Acids/isolation & purification ; Female ; Humans ; Pregnancy ; Prospective Studies ; Rh-Hr Blood-Group System/blood
Czasopismo naukowe
Tytuł :
OLA-Simple: A software-guided HIV-1 drug resistance test for low-resource laboratories.
Autorzy :
Panpradist N; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Global WACh Program, Department of Global Health, University of Washington, Seattle, WA 98104, USA.
Beck IA; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Vrana J; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Higa N; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
McIntyre D; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Ruth PS; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Departments of Electrical Engineering and Paul G. Allen Center for Computer Science & Engineering, University of Washington, Seattle, WA 98195, USA.
So I; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Kline EC; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Kanthula R; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA; Medstar Georgetown University Hospital, DC, 20007, USA.
Wong-On-Wing A; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Lim J; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Ko D; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Milne R; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA.
Rossouw T; Department of Immunology, University of Pretoria, Pretoria 0002, South Africa.
Feucht UD; Research Centre for Maternal, Fetal, Newborn and Child Health Care Strategies, Department of Paediatrics, University of Pretoria, Pretoria 0002, South Africa; Research Unit for Maternal and Infant Health Care Strategies, South African Medical Research Council, Kalafong Hospital, Atteridgeville 0008, South Africa.
Chung M; Department of Global Health, University of Washington, Seattle, WA 98195, USA; Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA; Department of Epidemiology, University of Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA; Department of Medicine, Aga Khan University, Nairobi, Kenya.
Jourdain G; Institut de Recherche pour le Développement IRD U174 PHPT, Chiang Mai 50000, Thailand; Faculty of Associated Medical Sciences, Division of Clinical Microbiology, Chiang Mai 50200, Thailand.
Ngo-Giang-Huong N; Institut de Recherche pour le Développement IRD U174 PHPT, Chiang Mai 50000, Thailand; Faculty of Associated Medical Sciences, Division of Clinical Microbiology, Chiang Mai 50200, Thailand.
Laomanit L; Faculty of Associated Medical Sciences, Division of Clinical Microbiology, Chiang Mai 50200, Thailand.
Soria J; Department of Infectious Diseases, Hospital Nacional Dos de Mayo, Av. Miguel Grau 13, Cercado de Lima 15003, Peru.
Lai J; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Klavins ED; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA; Departments of Electrical Engineering and Paul G. Allen Center for Computer Science & Engineering, University of Washington, Seattle, WA 98195, USA; Institute for Protein Design, University of Washington, Seattle, WA 98105, USA.
Frenkel LM; Center for Global Infectious Disease Research, Seattle Children's Research Institute, Seattle, WA 98109, USA; Department of Global Health, University of Washington, Seattle, WA 98195, USA; Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, 1959 NE Pacific Street, Seattle, WA 98195, USA; Division of Infectious Diseases, Department of Pediatrics, University of Washington, Seattle, WA 98195, USA; Division of Virology, Department of Laboratory Medicine, University of Washington, Seattle, WA 98195, USA; Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA. Electronic address: .
Lutz BR; Department of Bioengineering, University of Washington, Seattle, WA 98195, USA. Electronic address: .
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Źródło :
EBioMedicine [EBioMedicine] 2019 Dec; Vol. 50, pp. 34-44. Date of Electronic Publication: 2019 Nov 22.
Typ publikacji :
Journal Article
Journal Info :
Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101647039 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2352-3964 (Electronic) Linking ISSN: 23523964 NLM ISO Abbreviation: EBioMedicine Subsets: MEDLINE
MeSH Terms :
Drug Resistance, Viral*
Genotyping Techniques*
Software*
Anti-HIV Agents/*pharmacology
Computational Biology/*methods
HIV Infections/*diagnosis
HIV-1/*drug effects
HIV-1/*genetics
Anti-HIV Agents/therapeutic use ; Computational Biology/standards ; Genotype ; HIV Infections/drug therapy ; HIV Infections/virology ; Humans ; Microbial Sensitivity Tests ; Mutation ; Reagent Kits, Diagnostic ; Research Design ; Workflow
Czasopismo naukowe
Tytuł :
Estimation of DNA contamination and its sources in genotyped samples.
Autorzy :
Zajac GJM; Department of Biostatistics, Center for Statistical Genetics, University of Michigan School of Public Health, Ann Arbor, Michigan.
Fritsche LG; Department of Biostatistics, Center for Statistical Genetics, University of Michigan School of Public Health, Ann Arbor, Michigan.
Weinstock JS; Department of Biostatistics, Center for Statistical Genetics, University of Michigan School of Public Health, Ann Arbor, Michigan.
Dagenais SL; Department of Biological Chemistry and DNA Sequencing Core, University of Michigan, Ann Arbor, Michigan.
Lyons RH; Department of Biological Chemistry and DNA Sequencing Core, University of Michigan, Ann Arbor, Michigan.
Brummett CM; Department of Anesthesiology, Division of Pain Medicine, University of Michigan Medical School, Ann Arbor, Michigan.
Abecasis GR; Department of Biostatistics, Center for Statistical Genetics, University of Michigan School of Public Health, Ann Arbor, Michigan.
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Źródło :
Genetic epidemiology [Genet Epidemiol] 2019 Dec; Vol. 43 (8), pp. 980-995. Date of Electronic Publication: 2019 Aug 26.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
Journal Info :
Publisher: Wiley-Liss Country of Publication: United States NLM ID: 8411723 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-2272 (Electronic) Linking ISSN: 07410395 NLM ISO Abbreviation: Genet. Epidemiol. Subsets: MEDLINE
MeSH Terms :
DNA Contamination*
Genotyping Techniques*/methods
DNA ; Gene Frequency ; Genetic Markers ; Genomics/methods ; Genotype ; Humans ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł :
Optimizing PCR for Mouse Genotyping: Recommendations for Reliable, Rapid, Cost Effective, Robust and Adaptable to High-Throughput Genotyping Protocol for Any Type of Mutation.
Autorzy :
Jacquot S; Institut Clinique de la Souris, PHENOMIN-ICS, Illkirch, France.
Chartoire N; Institut Clinique de la Souris, PHENOMIN-ICS, Illkirch, France.
Piguet F; NeuroGenCell Thérapie Génique et Cellulaire des Maladies Neurodégénératives de l'Adulte et de l'Enfant, INSERM U1127, Institut du Cerveau et de la Moelle Épinière (ICM), Paris, France.
Hérault Y; Institut Clinique de la Souris, PHENOMIN-ICS, Illkirch, France.; Université de Strasbourg, CNRS, INSERM, Institut de Génétique, Biologie Moléculaire et Cellulaire, Illkirch, France.
Pavlovic G; Institut Clinique de la Souris, PHENOMIN-ICS, Illkirch, France.
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Źródło :
Current protocols in mouse biology [Curr Protoc Mouse Biol] 2019 Dec; Vol. 9 (4), pp. e65.
Typ publikacji :
Journal Article
Journal Info :
Publisher: John Wiley & Sons Country of Publication: United States NLM ID: 101560384 Publication Model: Print Cited Medium: Internet ISSN: 2161-2617 (Electronic) Linking ISSN: 21612617 NLM ISO Abbreviation: Curr Protoc Mouse Biol Subsets: MEDLINE
MeSH Terms :
Mutation*
Genotyping Techniques/*methods
High-Throughput Nucleotide Sequencing/*methods
Polymerase Chain Reaction/*methods
Animals ; Genotyping Techniques/instrumentation ; High-Throughput Nucleotide Sequencing/instrumentation ; Mice ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
A PCR-lateral flow assay system based on gold magnetic nanoparticles for CYP2C19 genotyping and its clinical applications.
Autorzy :
Xuhong Y; a College of Life Sciences , Northwest University , Xi'an , China.
Sinong Z; a College of Life Sciences , Northwest University , Xi'an , China.
Jianping L; a College of Life Sciences , Northwest University , Xi'an , China.
Yu C; a College of Life Sciences , Northwest University , Xi'an , China.
Juanli Z; b National Engineering Research Center for Miniaturized Detection System , Xi'an , China.
Chao Z; a College of Life Sciences , Northwest University , Xi'an , China.
Desheng L; a College of Life Sciences , Northwest University , Xi'an , China.
Kai H; a College of Life Sciences , Northwest University , Xi'an , China.
Yali C; a College of Life Sciences , Northwest University , Xi'an , China.; b National Engineering Research Center for Miniaturized Detection System , Xi'an , China.
Wenli H; a College of Life Sciences , Northwest University , Xi'an , China.; b National Engineering Research Center for Miniaturized Detection System , Xi'an , China.
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Źródło :
Artificial cells, nanomedicine, and biotechnology [Artif Cells Nanomed Biotechnol] 2019 Dec; Vol. 47 (1), pp. 636-643.
Typ publikacji :
Evaluation Study; Journal Article
Journal Info :
Publisher: Taylor & Francis Country of Publication: England NLM ID: 101594777 Publication Model: Print Cited Medium: Internet ISSN: 2169-141X (Electronic) Linking ISSN: 21691401 NLM ISO Abbreviation: Artif Cells Nanomed Biotechnol Subsets: MEDLINE
MeSH Terms :
Polymerase Chain Reaction*/economics
Cytochrome P-450 CYP2C19/*genetics
Genotyping Techniques/*instrumentation
Gold/*chemistry
Magnetite Nanoparticles/*chemistry
Cytochrome P-450 CYP2C19/blood ; Gene Frequency ; Genotype ; Genotyping Techniques/economics ; Humans ; Mutation ; Sensitivity and Specificity ; Sequence Analysis, DNA/standards ; Time Factors
Czasopismo naukowe
Tytuł :
An idea to explore: Genotyping bull sperm to introduce basic molecular biology techniques in an animal science course.
Autorzy :
De Groef B; Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Bundoora, Victoria, 3086, Australia.
Grommen SVH; Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Bundoora, Victoria, 3086, Australia.
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Źródło :
Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology [Biochem Mol Biol Educ] 2019 Nov; Vol. 47 (6), pp. 708-711. Date of Electronic Publication: 2019 Aug 30.
Typ publikacji :
Journal Article
Journal Info :
Publisher: John Wiley & sons Country of Publication: United States NLM ID: 100970605 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1539-3429 (Electronic) Linking ISSN: 14708175 NLM ISO Abbreviation: Biochem Mol Biol Educ Subsets: MEDLINE
MeSH Terms :
Genotype*
Genotyping Techniques*
Molecular Biology/*education
Molecular Biology/*methods
Science/*education
Spermatozoa/*cytology
Spermatozoa/*metabolism
Animals ; Caseins/genetics ; Curriculum ; DNA/genetics ; Humans ; Laboratories ; Learning ; Male ; Students
Czasopismo naukowe
Tytuł :
Evaluation of KRAS, NRAS and BRAF mutations detection in plasma using an automated system for patients with metastatic colorectal cancer.
Autorzy :
Franczak C; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Witz A; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Geoffroy K; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Demange J; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Rouyer M; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Husson M; Institut de Cancérologie de Lorraine, Service de Biopathologie, Vandoeuvre les Nancy, France.
Massard V; Institut de Cancérologie de Lorraine, Département d'oncologie médicale, Vandoeuvre les Nancy, France.
Gavoille C; Institut de Cancérologie de Lorraine, Département d'oncologie médicale, Vandoeuvre les Nancy, France.
Lambert A; Institut de Cancérologie de Lorraine, Département d'oncologie médicale, Vandoeuvre les Nancy, France.
Gilson P; Université de Lorraine, CNRS UMR 7039 CRAN, Institut de Cancérologie de Lorraine, Service de Biopathologie, Nancy, France.
Gambier N; CHRU Nancy, Department of Clinical Pharmacology and Toxicology, Nancy, France.; Université de Lorraine, UMR 7365 CNRS-UL, IMoPA, Vandœuvre-lès-Nancy, France.
Scala-Bertola J; CHRU Nancy, Department of Clinical Pharmacology and Toxicology, Nancy, France.; Université de Lorraine, UMR 7365 CNRS-UL, IMoPA, Vandœuvre-lès-Nancy, France.
Merlin JL; Université de Lorraine, CNRS UMR 7039 CRAN, Institut de Cancérologie de Lorraine, Service de Biopathologie, Nancy, France.
Harlé A; Université de Lorraine, CNRS UMR 7039 CRAN, Institut de Cancérologie de Lorraine, Service de Biopathologie, Nancy, France.
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Źródło :
PloS one [PLoS One] 2020 Jan 15; Vol. 15 (1), pp. e0227294. Date of Electronic Publication: 2020 Jan 15 (Print Publication: 2020).
Typ publikacji :
Evaluation Study; Journal Article
Journal Info :
Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS ONE Subsets: MEDLINE
MeSH Terms :
Biomarkers, Tumor/*genetics
Circulating Tumor DNA/*isolation & purification
Colorectal Neoplasms/*diagnosis
DNA Mutational Analysis/*instrumentation
Genotyping Techniques/*instrumentation
Cell Line, Tumor ; Circulating Tumor DNA/genetics ; Clinical Trials as Topic ; Colorectal Neoplasms/genetics ; DNA Mutational Analysis/methods ; GTP Phosphohydrolases/genetics ; Gene Frequency ; Genotyping Techniques/methods ; Humans ; Limit of Detection ; Membrane Proteins/genetics ; Microfluidic Analytical Techniques/instrumentation ; Microfluidic Analytical Techniques/methods ; Mutation ; Proto-Oncogene Proteins B-raf/genetics ; Proto-Oncogene Proteins p21(ras)/genetics ; Sensitivity and Specificity
Czasopismo naukowe
Tytuł :
Genome-Wide Identification of QTLs for Grain Protein Content Based on Genotyping-by-Resequencing and Verification of qGPC1-1 in Rice.
Autorzy :
Wu YB; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Li G; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Zhu YJ; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Cheng YC; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Yang JY; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Chen HZ; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
Song XJ; Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
Ying JZ; State Key Laboratory of Rice Biology and Chinese National Center of Rice Improvement, China National Rice Research Institute, Hangzhou 310006, China.
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Źródło :
International journal of molecular sciences [Int J Mol Sci] 2020 Jan 09; Vol. 21 (2). Date of Electronic Publication: 2020 Jan 09.
Typ publikacji :
Journal Article
Journal Info :
Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067 (Electronic) Linking ISSN: 14220067 NLM ISO Abbreviation: Int J Mol Sci Subsets: MEDLINE
MeSH Terms :
Genome, Plant*
Genotyping Techniques*
Sequence Analysis, DNA*
Grain Proteins/*metabolism
Oryza/*genetics
Quantitative Trait Loci/*genetics
Chromosome Mapping ; Crosses, Genetic ; Genetic Linkage ; Heterozygote ; Inbreeding ; Phenotype ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
Challenges and Approaches to Genotyping Repetitive DNA.
Autorzy :
Morton EA; Department of Genome Sciences.
Hall AN; Department of Genome Sciences.; Molecular and Cellular Biology Program, University of Washington, Seattle, 98195.
Kwan E; Department of Genome Sciences.
Mok C; Department of Molecular Genetics, University of Toronto, Ontario M5S 1A8, Canada, and.
Queitsch K; Altius Institute for Biomedical Sciences, Seattle, Washington 98121.
Nandakumar V; Altius Institute for Biomedical Sciences, Seattle, Washington 98121.
Stamatoyannopoulos J; Altius Institute for Biomedical Sciences, Seattle, Washington 98121.
Brewer BJ; Department of Genome Sciences.
Waterston R; Department of Genome Sciences.
Queitsch C; Department of Genome Sciences, .
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Źródło :
G3 (Bethesda, Md.) [G3 (Bethesda)] 2020 Jan 07; Vol. 10 (1), pp. 417-430. Date of Electronic Publication: 2020 Jan 07.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
Journal Info :
Publisher: Genetics Society of America Country of Publication: United States NLM ID: 101566598 Publication Model: Electronic Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE
MeSH Terms :
DNA Copy Number Variations*
Genotyping Techniques/*methods
Animals ; Caenorhabditis elegans ; Genotyping Techniques/standards ; Practice Guidelines as Topic ; RNA, Ribosomal/genetics ; Saccharomyces cerevisiae ; Whole Genome Sequencing/methods ; Whole Genome Sequencing/standards
Czasopismo naukowe
Tytuł :
How do I incorporate red cell genotyping to improve chronic transfusion therapy?
Autorzy :
Van Buren NL; Innovative Blood Resources, St. Paul, Minnesota.; Transfusion Services, Children's Minnesota, Minneapolis, Minnesota.
Gorlin JB; Innovative Blood Resources, St. Paul, Minnesota.; Transfusion Services, Children's Minnesota, Minneapolis, Minnesota.
Corby SM; Innovative Blood Resources, St. Paul, Minnesota.
Cassidy S; Transfusion Services, Children's Minnesota, Minneapolis, Minnesota.
FritchLilla S; Cancer and Blood Disorders, Children's Minnesota, Minneapolis, Minnesota.
Nelson SC; Cancer and Blood Disorders, Children's Minnesota, Minneapolis, Minnesota.
Westhoff CM; New York Blood Center, New York, New York.
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Źródło :
Transfusion [Transfusion] 2020 Jan; Vol. 60 (1), pp. 16-25. Date of Electronic Publication: 2019 Nov 23.
Typ publikacji :
Journal Article
Journal Info :
Publisher: American Association Of Blood Banks Country of Publication: United States NLM ID: 0417360 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1537-2995 (Electronic) Linking ISSN: 00411132 NLM ISO Abbreviation: Transfusion Subsets: MEDLINE
MeSH Terms :
Alleles*
Anemia, Sickle Cell*/blood
Anemia, Sickle Cell*/genetics
Anemia, Sickle Cell*/therapy
Erythrocyte Transfusion*
Genotyping Techniques*
Rh-Hr Blood-Group System*/blood
Rh-Hr Blood-Group System*/genetics
Thalassemia*/blood
Thalassemia*/genetics
Thalassemia*/therapy
Erythrocytes/*metabolism
Adolescent ; Child ; Child, Preschool ; Female ; Genotype ; Humans ; Isoantibodies/blood ; Male
Czasopismo naukowe
Tytuł :
Rapid detection and genotyping of ALK fusion variants by adapter multiplex PCR and high-resolution melting analysis.
Autorzy :
Li M; Scientific Research Center, The Second Hospital of Dalian Medical University, Dalian, 116027, China. .
Lu S; Department of Pathology, Dalian Medical University, Dalian, 116044, China. .
Sun X; Department of Pathology, The First Hospital of Dalian Medical University, Dalian, 116011, China.
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Źródło :
Laboratory investigation; a journal of technical methods and pathology [Lab Invest] 2020 Jan; Vol. 100 (1), pp. 110-119. Date of Electronic Publication: 2019 Oct 22.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Journal Info :
Publisher: Williams & Wilkins Country of Publication: United States NLM ID: 0376617 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1530-0307 (Electronic) Linking ISSN: 00236837 NLM ISO Abbreviation: Lab. Invest. Subsets: MEDLINE
MeSH Terms :
Genotyping Techniques*
Anaplastic Lymphoma Kinase/*genetics
A549 Cells ; Humans ; Multiplex Polymerase Chain Reaction ; Nucleic Acid Denaturation ; Oncogene Fusion
Czasopismo naukowe

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