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Wyszukujesz frazę ""Genotyping"" wg kryterium: Temat


Tytuł :
Universal probe-based intermediate primer-triggered qPCR (UPIP-qPCR) for SNP genotyping.
Autorzy :
Li B; Key Laboratory of Biological Medicines in Universities of Shandong Province, Weifang Key Laboratory of Antibody Medicines, School of Bioscience and Technology, Weifang Medical University, Jinan, 261053, Shandong, China. .; Institute for Translational Medicine, Qingdao University, Qingdao, 266021, China. .
Liu Y; School of Basic Medicine, Qingdao University, Qingdao, 266021, China.
Hao X; Institute for Translational Medicine, Qingdao University, Qingdao, 266021, China.
Dong J; Key Laboratory of Biological Medicines in Universities of Shandong Province, Weifang Key Laboratory of Antibody Medicines, School of Bioscience and Technology, Weifang Medical University, Jinan, 261053, Shandong, China.
Chen L; Key Laboratory of Biological Medicines in Universities of Shandong Province, Weifang Key Laboratory of Antibody Medicines, School of Bioscience and Technology, Weifang Medical University, Jinan, 261053, Shandong, China.
Li H; Key Laboratory of Biological Medicines in Universities of Shandong Province, Weifang Key Laboratory of Antibody Medicines, School of Bioscience and Technology, Weifang Medical University, Jinan, 261053, Shandong, China.
Wu W; College of Food Science and Engineering, Qingdao Agricultural University, Qingdao, 266109, China.
Liu Y; Institute for Translational Medicine, Qingdao University, Qingdao, 266021, China.
Wang J; School of Basic Medicine, Qingdao University, Qingdao, 266021, China.
Wang Y; Institute for Translational Medicine, Qingdao University, Qingdao, 266021, China.
Li P; Institute for Translational Medicine, Qingdao University, Qingdao, 266021, China. .
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Źródło :
BMC genomics [BMC Genomics] 2021 Nov 24; Vol. 22 (1), pp. 850. Date of Electronic Publication: 2021 Nov 24.
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Polymorphism, Single Nucleotide*
Alleles ; Genotype ; Humans ; Real-Time Polymerase Chain Reaction
Czasopismo naukowe
Tytuł :
Construction of an in-house allelic ladder for Canine Genotypes™ Panel 2.1 Kit.
Autorzy :
Lee M; Forensic DNA Division, National Forensic Service, Wonju, Korea.
Hwang IK; Forensic DNA Division, National Forensic Service, Wonju, Korea.
Jung JY; Forensic DNA Division, National Forensic Service, Wonju, Korea.
Kim JY; Forensic DNA Division, National Forensic Service, Wonju, Korea.
Chang M; Forensic DNA Division, National Forensic Service, Wonju, Korea.
Moon S; Forensic DNA Division, National Forensic Service, Wonju, Korea.
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Źródło :
Journal of forensic sciences [J Forensic Sci] 2021 Nov; Vol. 66 (6), pp. 2362-2368. Date of Electronic Publication: 2021 Jul 23.
Typ publikacji :
Journal Article
MeSH Terms :
Alleles*
Genotype*
Genotyping Techniques*
Dogs/*genetics
Animals ; DNA Fingerprinting ; Forensic Genetics/methods ; Microsatellite Repeats ; Polymerase Chain Reaction ; Reproducibility of Results
Czasopismo naukowe
Tytuł :
A 2b-RAD parentage analysis pipeline for complex and mixed DNA samples.
Autorzy :
Miller-Crews I; Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA.
Matz MV; Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA.
Hofmann HA; Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712, USA; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA; Institue for Neuroscience, The University of Texas at Austin, Austin, TX 78712, USA. Electronic address: .
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Źródło :
Forensic science international. Genetics [Forensic Sci Int Genet] 2021 Nov; Vol. 55, pp. 102590. Date of Electronic Publication: 2021 Sep 03.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Genotyping Techniques*
Microsatellite Repeats*
Animals ; DNA/genetics ; Humans ; Metagenomics ; Pedigree ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Standardization of a SNP panel for parentage verification and identification in the domestic cat (Felis silvestris catus).
Autorzy :
de Groot M; MolGen, Traverse 2, Veenendaal, Utrecht, 3905NL, The Netherlands.
Anderson H; Wisdom Health, Helsinki, 00290, Finland.
Bauer H; Laboklin GMBH & Co. KG, Bad Kissingen, 97688, Germany.
Bauguil C; Aveyron Labo, Rodez, 12031, France.
Bellone RR; Veterinary Genetics Laboratory, School of Veterinary Medicine, University of California, Davis, CA, 95616, USA.; Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA, 95616, USA.
Brugidou R; Aveyron Labo, Rodez, 12031, France.
Buckley RM; Department of Veterinary Medicine and Surgery, College of Veterinary Medicine, University of Missouri, Columbia, MO, 65211, USA.
Dovč P; Department of Animal Science, Biotechnical Faculty, University of Ljubljana, Ljubljana, 1000, Slovenia.
Forman O; Wisdom Health, Helsinki, 00290, Finland.
Grahn RA; Veterinary Genetics Laboratory, School of Veterinary Medicine, University of California, Davis, CA, 95616, USA.
Kock L; Neogen Genomics, Lincoln, NE, 68504, USA.
Longeri M; Department of Veterinary Medicine, University of Milan, Milan, 20133, Italy.
Mouysset-Geniez S; Aveyron Labo, Rodez, 12031, France.
Qiu J; Neogen Genomics, Lincoln, NE, 68504, USA.
Sofronidis G; Orivet Genetic Pet Care, Suite St. Kilda, Melbourne, Vic., 3182, Australia.
van der Goor LHP; VHLGenetics, Wageningen, NL, 6708 PW, The Netherlands.
Lyons LA; Department of Veterinary Medicine and Surgery, College of Veterinary Medicine, University of Missouri, Columbia, MO, 65211, USA.
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Źródło :
Animal genetics [Anim Genet] 2021 Oct; Vol. 52 (5), pp. 675-682. Date of Electronic Publication: 2021 Jun 18.
Typ publikacji :
Journal Article
MeSH Terms :
Genetic Markers*
Genotyping Techniques*/standards
Polymorphism, Single Nucleotide*
Cats/*genetics
Animals ; Breeding ; Genetics, Population ; Oligonucleotide Array Sequence Analysis/standards
Czasopismo naukowe
Tytuł :
Array-based dynamic allele specific hybridization (Array-DASH): Optimization-free microarray processing for multiple simultaneous genomic assays.
Autorzy :
Gibson SJ; Department of Genetics, Adrian Building, University of Leicester, University Road, Leicester, Leicestershire, LE17RH, UK.
Zahra N; Anglia Ruskin University, Department of Biomedical and Forensic Science, SCI004, East Road, Cambridge, CB1 1PT, UK.
Freeman PJ; Division of Informatics, Imaging & Data Science, Faculty of Biology, Medicine and Health, The University of Manchester, G.725, Stopford Building, Oxford Road, Manchester, M13 9PT, UK.
Howard C; Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.
Lancaster O; Department of Genetics, Adrian Building, University of Leicester, University Road, Leicester, Leicestershire, LE17RH, UK.
Veal C; Department of Genetics, Adrian Building, University of Leicester, University Road, Leicester, Leicestershire, LE17RH, UK.
Fontdevila MC; Institut de Recerca de la SIDA - IrsiCaixa, Hospital Universitari Germans Trias i Pujol, Crta. de Canyet s/n, Planta 2a, 08916, Badalona, Catalonia, Spain.
Paredes R; Institut de Recerca de la SIDA - IrsiCaixa, Hospital Universitari Germans Trias i Pujol, Crta. de Canyet s/n, Planta 2a, 08916, Badalona, Catalonia, Spain.
Noguera-Julian M; Institut de Recerca de la SIDA - IrsiCaixa, Hospital Universitari Germans Trias i Pujol, Crta. de Canyet s/n, Planta 2a, 08916, Badalona, Catalonia, Spain.
Slater A; Biomolecular Technology Group, School of Allied Health Sciences, De Montfort University, Hawthorn Building HB1.12, The Gateway, Leicester, Leicestershire, LE19BH, UK.
Brookes AJ; Department of Genetics, Adrian Building, University of Leicester, University Road, Leicester, Leicestershire, LE17RH, UK. Electronic address: .
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Źródło :
Analytical biochemistry [Anal Biochem] 2021 Aug 01; Vol. 626, pp. 114124. Date of Electronic Publication: 2021 Feb 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Genome, Plant*
Genome, Viral*
Genotyping Techniques*
Oligonucleotide Array Sequence Analysis*
Software*
COVID-19/*genetics
HIV-1/*genetics
Hypericum/*genetics
COVID-19/epidemiology ; Humans
Czasopismo naukowe
Tytuł :
Recommendations for accurate genotyping of SARS-CoV-2 using amplicon-based sequencing of clinical samples.
Autorzy :
Kubik S; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Marques AC; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland.
Xing X; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland.
Silvery J; LABCON-OWL Analytik, Forschung und Consulting GmbH, Siemensstraße 40, 32105 Bad Salzuflen, Germany.
Bertelli C; Genomics and Metagenomics Laboratory, Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Bugnon 48, 1011 Lausanne, Switzerland.
De Maio F; Fondazione Policlinico Universitario A. Gemelli IRCCS, Università Cattolica Del Sacro Cuore, L.go Agostino Gemelli 8, 00168 Roma, Italy.
Pournaras S; Laboratory of Clinical Microbiology, Attikon University Hospital Medical School, National and Kapodistrian University of Athens, Athens, Rimini 1, Chaidari 124 62, Greece.
Burr T; Source BioScience, Units 24/25, William James House, Cowley Road, Cambridge, CB4 0WU, United Kingdom.
Duffourd Y; Equipe GAD - Inserm U1231, CHU François Mitterrand, 21000 Dijon, France.
Siemens H; LABCON-OWL Analytik, Forschung und Consulting GmbH, Siemensstraße 40, 32105 Bad Salzuflen, Germany.
Alloui C; Laboratoire de Virologie, CHU Avicenne, AP-HP, 93000 Bobigny, France.
Song L; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland.
Wenger Y; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Saitta A; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Macheret M; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Smith EW; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Menu P; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland.
Brayer M; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland.
Steinmetz LM; Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA.
Si-Mohammed A; Laboratoire de Virologie, CHU François Mitterrand, 2, Rue Angélique Ducoudray, 2100 Dijon, France.
Chuisseu J; Source BioScience, Units 24/25, William James House, Cowley Road, Cambridge, CB4 0WU, United Kingdom.
Stevens R; Source BioScience, Units 24/25, William James House, Cowley Road, Cambridge, CB4 0WU, United Kingdom.
Constantoulakis P; BioAnalytica Genotypos SA, 3-5 Ilision Str, 115 28 Athens, Greece.
Sali M; Dipartimento di Scienze Biotecnologiche di Base, Cliniche Intensivologiche e Perioperatorie - Sezione di Microbiologia, Università Cattolica Del Sacro Cuore, Rome, Italy.
Greub G; Genomics and Metagenomics Laboratory, Institute of Microbiology, Lausanne University Hospital and University of Lausanne, Bugnon 48, 1011 Lausanne, Switzerland.
Tiemann C; LABCON-OWL Analytik, Forschung und Consulting GmbH, Siemensstraße 40, 32105 Bad Salzuflen, Germany.
Pelechano V; SciLifeLab, Department of Microbiology, Tumour and Cell Biology, Karolinska Institutet, 17165 Solna, Sweden.
Willig A; SOPHiA GENETICS, Chemin des Mines 9, CH-1202 Geneva, Switzerland.
Xu Z; SOPHiA GENETICS, Rue Du Centre 172, CH-1025 Saint Sulpice, Switzerland. Electronic address: .
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Źródło :
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases [Clin Microbiol Infect] 2021 Jul; Vol. 27 (7), pp. 1036.e1-1036.e8. Date of Electronic Publication: 2021 Apr 02.
Typ publikacji :
Journal Article
MeSH Terms :
COVID-19/*diagnosis
Genotyping Techniques/*standards
High-Throughput Nucleotide Sequencing/*standards
SARS-CoV-2/*genetics
Whole Genome Sequencing/*standards
Artifacts ; COVID-19/virology ; Genome, Viral ; Genotyping Techniques/methods ; Guidelines as Topic ; High-Throughput Nucleotide Sequencing/methods ; Humans ; RNA, Viral ; Reproducibility of Results ; SARS-CoV-2/isolation & purification ; Sensitivity and Specificity ; Whole Genome Sequencing/methods ; Workflow
Czasopismo naukowe
Tytuł :
Investigation of a Legionnaires' Disease Outbreak in Yamagata City, Japan, 2019, Using Direct Sequence-Based Typing.
Autorzy :
Seto J; Department of Microbiology, Yamagata Prefectural Institute of Public Health, Japan.
Amemura-Maekawa J; Department of Bacteriology I, National Institute of Infectious Diseases, Japan.
Sampei M; Department of Microbiology, Yamagata Prefectural Institute of Public Health, Japan.
Araki K; Yamagata City Institute of Public Health, Japan.
Endo M; Yamagata City Institute of Public Health, Japan.
Kura F; Department of Bacteriology I, National Institute of Infectious Diseases, Japan.
Ikeda T; Department of Microbiology, Yamagata Prefectural Institute of Public Health, Japan.
Kato T; Yamagata City Institute of Public Health, Japan.
Ohnishi M; Department of Bacteriology I, National Institute of Infectious Diseases, Japan.
Mizuta K; Department of Microbiology, Yamagata Prefectural Institute of Public Health, Japan.
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Źródło :
Japanese journal of infectious diseases [Jpn J Infect Dis] 2021 Sep 22; Vol. 74 (5), pp. 491-494. Date of Electronic Publication: 2021 Feb 26.
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Sequence Analysis, DNA*
Legionella pneumophila/*genetics
Legionella pneumophila/*isolation & purification
Legionnaires' Disease/*epidemiology
Aged ; Antigens, Bacterial ; Bacterial Proteins ; Bacterial Typing Techniques ; DNA, Bacterial/analysis ; Disease Outbreaks ; Electrophoresis, Gel, Pulsed-Field ; Female ; Fitness Centers ; Flagellin ; Humans ; Japan/epidemiology ; Legionella pneumophila/classification ; Male ; Middle Aged ; Molecular Diagnostic Techniques ; Nucleic Acid Amplification Techniques ; Peptidylprolyl Isomerase ; Polymerase Chain Reaction ; Porins
SCR Protocol :
LAMP assay
Czasopismo naukowe
Tytuł :
Examining performance and likelihood ratios for two likelihood ratio systems using the PROVEDIt dataset.
Autorzy :
Riman S; Applied Genetics Group, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America.
Iyer H; Statistical Design, Analysis, Modeling Group, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America.
Vallone PM; Applied Genetics Group, National Institute of Standards and Technology, Gaithersburg, Maryland, United States of America.
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Źródło :
PloS one [PLoS One] 2021 Sep 17; Vol. 16 (9), pp. e0256714. Date of Electronic Publication: 2021 Sep 17 (Print Publication: 2021).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Alleles*
Genome, Human*
Genotype*
Genotyping Techniques*
Software*
DNA/*genetics
Area Under Curve ; Datasets as Topic ; Gene Frequency ; Humans ; Likelihood Functions ; Microsatellite Repeats ; ROC Curve
Czasopismo naukowe
Tytuł :
Forensic nanopore sequencing of STRs and SNPs using Verogen's ForenSeq DNA Signature Prep Kit and MinION.
Autorzy :
Ren ZL; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China.
Zhang JR; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China.
Zhang XM; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China.
Liu X; Beijing Center for Physical and Chemical Analysis, Beijing, 100089, People's Republic of China.
Lin YF; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China.
Bai H; Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, People's Republic of China.
Wang MC; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China.
Cheng F; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China.
Liu JD; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China.
Li P; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China.
Kong L; Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, 100871, People's Republic of China.
Bo XC; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China.
Wang SQ; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China. .
Ni M; Beijing Institute of Radiation Medicine, Beijing, 100850, People's Republic of China. .
Yan JW; School of Forensic Medicine, Shanxi Medical University, Taiyuan, 030001, People's Republic of China. .
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Źródło :
International journal of legal medicine [Int J Legal Med] 2021 Sep; Vol. 135 (5), pp. 1685-1693. Date of Electronic Publication: 2021 May 05.
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Microsatellite Repeats*
Polymorphism, Single Nucleotide*
Nanopore Sequencing/*methods
Sequence Analysis, DNA/*methods
Genetic Markers ; Humans ; Pilot Projects
Czasopismo naukowe
Tytuł :
An alternate workflow for preparing Precision ID Ancestry and Identity Panel libraries for Illumina sequencing.
Autorzy :
Scheible MK; College of Veterinary Medicine, Population Health and Pathobiology, North Carolina State University, 1060 William Moore Drive, Raleigh, NC, USA.
Timpano EK; College of Veterinary Medicine, Population Health and Pathobiology, North Carolina State University, 1060 William Moore Drive, Raleigh, NC, USA.
Boggs LM; College of Veterinary Medicine, Population Health and Pathobiology, North Carolina State University, 1060 William Moore Drive, Raleigh, NC, USA.
Meiklejohn KA; College of Veterinary Medicine, Population Health and Pathobiology, North Carolina State University, 1060 William Moore Drive, Raleigh, NC, USA. .
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Źródło :
International journal of legal medicine [Int J Legal Med] 2021 Sep; Vol. 135 (5), pp. 1717-1726. Date of Electronic Publication: 2021 Mar 04.
Typ publikacji :
Journal Article
MeSH Terms :
Gene Library*
Genotyping Techniques*
Polymorphism, Single Nucleotide*
Workflow*
High-Throughput Nucleotide Sequencing/*methods
Sequence Analysis, DNA/*methods
Female ; Humans ; Male
Czasopismo naukowe
Tytuł :
Rapid high-resolution melting genotyping scheme for Escherichia coli based on MLST derived single nucleotide polymorphisms.
Autorzy :
Bezdicek M; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic.; Department of Internal Medicine, Hematology and Oncology, Masaryk University, Brno, Czech Republic.
Nykrynova M; Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic.
Sedlar K; Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic.
Kralova S; Department of Experimental Biology, Czech Collection of Microorganisms, Faculty of Science, Masaryk University, Brno, Czech Republic.
Hanslikova J; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic.
Komprdova A; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic.
Skutkova H; Department of Biomedical Engineering, Faculty of Electrical Engineering and Communication, Brno University of Technology, Brno, Czech Republic.
Kocmanova I; Department of Clinical Microbiology and Immunology, University Hospital Brno, Brno, Czech Republic.
Mayer J; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic.
Lengerova M; Department of Internal Medicine, Hematology and Oncology, University Hospital Brno, Brno, Czech Republic. .; Department of Internal Medicine, Hematology and Oncology, Masaryk University, Brno, Czech Republic. .
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Źródło :
Scientific reports [Sci Rep] 2021 Aug 16; Vol. 11 (1), pp. 16572. Date of Electronic Publication: 2021 Aug 16.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Bacterial Typing Techniques*
Genes, Bacterial*
Genotyping Techniques*
Polymorphism, Single Nucleotide*
DNA, Bacterial/*genetics
Escherichia coli/*genetics
Multilocus Sequence Typing/*methods
Base Composition ; Computer Simulation ; Czech Republic/epidemiology ; DNA Primers ; DNA, Bacterial/chemistry ; Disease Outbreaks ; Escherichia coli/classification ; Escherichia coli/isolation & purification ; Escherichia coli Infections/microbiology ; Genome, Bacterial ; Nucleic Acid Denaturation ; Polymerase Chain Reaction/methods ; Population Surveillance ; Repetitive Sequences, Nucleic Acid ; Whole Genome Sequencing
Czasopismo naukowe
Tytuł :
A deterministic genotyping workflow reduces waste of transgenic individuals by two-thirds.
Autorzy :
Strobl F; Physical Biology/Physikalische Biologie (IZN, FB 15), Buchmann Institute for Molecular Life Sciences (BMLS), Cluster of Excellence Frankfurt - Macromolecular Complexes (CEF - MC), Goethe-Universität Frankfurt Am Main (Campus Riedberg), Max-von-Laue-Straße 15, 60438, Frankfurt am Main, Germany. .
Stelzer EHK; Physical Biology/Physikalische Biologie (IZN, FB 15), Buchmann Institute for Molecular Life Sciences (BMLS), Cluster of Excellence Frankfurt - Macromolecular Complexes (CEF - MC), Goethe-Universität Frankfurt Am Main (Campus Riedberg), Max-von-Laue-Straße 15, 60438, Frankfurt am Main, Germany.
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Źródło :
Scientific reports [Sci Rep] 2021 Jul 28; Vol. 11 (1), pp. 15325. Date of Electronic Publication: 2021 Jul 28.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Animals, Genetically Modified*
Genotyping Techniques*
Genetic Engineering/*methods
Genetic Vectors/*metabolism
Integrases/*genetics
Tribolium/*genetics
Animals ; Embryo, Nonmammalian ; Female ; Fluorescent Dyes/chemistry ; Fluorescent Dyes/metabolism ; Gene Expression ; Genetic Engineering/economics ; Genetic Markers ; Genetic Vectors/chemistry ; Heterozygote ; Histones/genetics ; Histones/metabolism ; Homozygote ; Integrases/metabolism ; Male ; Microscopy, Fluorescence ; Promoter Regions, Genetic ; Tubulin/genetics ; Tubulin/metabolism
Czasopismo naukowe
Tytuł :
Evaluation of the trnK-matK-trnK, ycf3, and accD-psal chloroplast regions to differentiate crop type and biogeographical origin of Cannabis sativa.
Autorzy :
Cheng YC; Department of Forensic Science, Sam Houston State University, 1003 Bowers Blvd, Huntsville, TX, 77340, USA.
Houston R; Department of Forensic Science, Sam Houston State University, 1003 Bowers Blvd, Huntsville, TX, 77340, USA. .
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Źródło :
International journal of legal medicine [Int J Legal Med] 2021 Jul; Vol. 135 (4), pp. 1235-1244. Date of Electronic Publication: 2021 Feb 18.
Typ publikacji :
Journal Article
MeSH Terms :
Genome, Chloroplast*
Genotyping Techniques*
Haplotypes*
Cannabis/*classification
Cannabis/*genetics
DNA Barcoding, Taxonomic/*methods
DNA, Chloroplast/*genetics
Canada ; Chile ; Genetic Markers ; Genotype ; INDEL Mutation ; Mexico ; Microsatellite Repeats ; Phylogeny ; Phylogeography ; Polymorphism, Single Nucleotide ; Principal Component Analysis ; United States
Czasopismo naukowe
Tytuł :
Rapid genotype imputation from sequence with reference panels.
Autorzy :
Davies RW; Department of Statistics, University of Oxford, Oxford, UK. .
Kucka M; Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany.
Su D; Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany.
Shi S; Department of Statistics, University of Oxford, Oxford, UK.
Flanagan M; Department of Pediatrics, Weill Cornell Medical College, New York, NY, USA.
Cunniff CM; Department of Pediatrics, Weill Cornell Medical College, New York, NY, USA.
Chan YF; Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany.
Myers S; Department of Statistics, University of Oxford, Oxford, UK.; The Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
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Źródło :
Nature genetics [Nat Genet] 2021 Jul; Vol. 53 (7), pp. 1104-1111. Date of Electronic Publication: 2021 Jun 03.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Genotype*
Genotyping Techniques*
Whole Genome Sequencing*
Computational Biology/*methods
Computational Biology/economics ; Diploidy ; Humans ; Polymorphism, Single Nucleotide ; Reproducibility of Results ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
A novel workflow to improve genotyping of multigene families in wildlife species: An experimental set-up with a known model system.
Autorzy :
Gillingham MAF; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.
Montero BK; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.; Zoological Institute, Animal Ecology and Conservation, Biocenter Grindel, Universität Hamburg, Hamburg,, Germany.
Wihelm K; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.
Grudzus K; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.
Sommer S; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.
Santos PSC; Institute of Evolutionary Ecology and Conservation Genomics, Ulm Universität, Ulm, Germany.
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Źródło :
Molecular ecology resources [Mol Ecol Resour] 2021 Apr; Vol. 21 (3), pp. 982-998. Date of Electronic Publication: 2020 Nov 21.
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Multigene Family*
Software*
Workflow*
Alleles ; Animals ; Animals, Wild/genetics ; Genotype ; High-Throughput Nucleotide Sequencing ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Development and validation of a wart-associated human papilloma virus genotyping assay for detection of HPV in cutaneous warts.
Autorzy :
Redzic N; AMBIOR, Laboratory for Cell Biology and Histology, University of Antwerp, Antwerp, Belgium.; Laboratory of Molecular Pathology, AML, Antwerp, Belgium.
Benoy I; AMBIOR, Laboratory for Cell Biology and Histology, University of Antwerp, Antwerp, Belgium.; Laboratory of Molecular Pathology, AML, Antwerp, Belgium.; National Reference Center for HPV, Brussels, Belgium.
Vanden Broeck D; AMBIOR, Laboratory for Cell Biology and Histology, University of Antwerp, Antwerp, Belgium.; Laboratory of Molecular Pathology, AML, Antwerp, Belgium.; National Reference Center for HPV, Brussels, Belgium.; Department of Obstetrics and Gynaecology, International Center for Reproductive health, Ghent University, Ghent, Belgium.
Bogers JP; AMBIOR, Laboratory for Cell Biology and Histology, University of Antwerp, Antwerp, Belgium.; Laboratory of Molecular Pathology, AML, Antwerp, Belgium.; National Reference Center for HPV, Brussels, Belgium.
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Źródło :
Journal of medical virology [J Med Virol] 2021 Jun; Vol. 93 (6), pp. 3841-3848. Date of Electronic Publication: 2021 Mar 01.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Validation Study
MeSH Terms :
Genotype*
Genotyping Techniques/*standards
Papillomaviridae/*genetics
Real-Time Polymerase Chain Reaction/*methods
Skin/*virology
Warts/*virology
DNA, Viral/genetics ; Genotyping Techniques/methods ; Humans ; Papillomavirus Infections/virology ; Real-Time Polymerase Chain Reaction/standards ; Reproducibility of Results ; Skin/pathology ; Viral Load
Czasopismo naukowe
Tytuł :
A new mouse SNP genotyping assay for speed congenics: combining flexibility, affordability, and power.
Autorzy :
Andrews KR; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA. .
Hunter SS; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA.
Torrevillas BK; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
Céspedes N; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
Garrison SM; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
Strickland J; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
Wagers D; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
Hansten G; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA.
New DD; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA.
Fagnan MW; Institute for Bioinformatics and Evolutionary Studies (IBEST), University of Idaho, Moscow, ID, 83844, USA.
Luckhart S; Department of Entomology, Plant Pathology and Nematology, University of Idaho, Moscow, ID, 83844, USA. .; Department of Biological Sciences, University of Idaho, Moscow, ID, 83844, USA. .
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Źródło :
BMC genomics [BMC Genomics] 2021 May 24; Vol. 22 (1), pp. 378. Date of Electronic Publication: 2021 May 24.
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Polymorphism, Single Nucleotide*
Animals ; Costs and Cost Analysis ; Genotype ; Mice ; Mice, Inbred BALB C ; Mice, Inbred C57BL
Czasopismo naukowe
Tytuł :
Investigations of sequencing data and sample type on HLA class Ia typing with different computational tools.
Autorzy :
Yi J; Cancer Translational Research Institute, YuceBio Technology Co., Ltd., Shenzhen, China.
Chen L; Cancer Translational Research Institute, YuceBio Technology Co., Ltd., Shenzhen, China.
Xiao Y; Cancer Translational Research Institute, YuceBio Technology Co., Ltd., Shenzhen, China.
Zhao Z; Cancer Translational Research Institute, YuceBio Technology Co., Ltd., Shenzhen, China.
Su X; Yucebio Cancer Translational Research Institute and Chief Medical Officer for Yucebio Technology Co.
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Źródło :
Briefings in bioinformatics [Brief Bioinform] 2021 May 20; Vol. 22 (3).
Typ publikacji :
Journal Article
MeSH Terms :
Genotyping Techniques*
Histocompatibility Testing*
RNA-Seq*
Software*
HLA Antigens/*genetics
Humans
Czasopismo naukowe
Tytuł :
Development of a capture sequencing assay for enhanced detection and genotyping of tick-borne pathogens.
Autorzy :
Jain K; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Tagliafierro T; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Marques A; Laboratory of Clinical Immunology and Microbiology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Sanchez-Vicente S; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Gokden A; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Fallon B; Department of Psychiatry, Columbia University, New York, NY, USA.
Mishra N; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Briese T; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Kapoor V; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Sameroff S; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Guo C; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.
Marcos LA; Department of Medicine (Division of Infectious Diseases), Department of Microbiology and Immunology, State University of New York at Stony Brook, NY, Stony Brook, USA.
Hu L; Department of Molecular Biology and Microbiology, Tufts University, Boston, MA, USA.
Lipkin WI; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA.; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA.
Tokarz R; Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA. .; Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, NY, USA. .
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Źródło :
Scientific reports [Sci Rep] 2021 Jun 11; Vol. 11 (1), pp. 12384. Date of Electronic Publication: 2021 Jun 11.
Typ publikacji :
Journal Article; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Babesia microti/*genetics
Babesiosis/*microbiology
Borrelia burgdorferi/*genetics
Genotyping Techniques/*methods
Lyme Disease/*microbiology
Molecular Diagnostic Techniques/*methods
Sequence Analysis, DNA/*methods
Animals ; Babesia microti/pathogenicity ; Babesiosis/diagnosis ; Borrelia burgdorferi/pathogenicity ; Genome, Bacterial ; Genotyping Techniques/standards ; Humans ; Lyme Disease/diagnosis ; Mice ; Molecular Diagnostic Techniques/standards ; Sensitivity and Specificity ; Sequence Analysis, DNA/standards ; Ticks/microbiology
Czasopismo naukowe
Tytuł :
Mitochondrial Markers for the Detection of Duck Breeds Using Polymerase Chain Reaction.
Autorzy :
Natonek-Wiśniewska M; Department of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083 Balice, Poland.
Krzyścin P; Department of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083 Balice, Poland.
Rubiś D; Department of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083 Balice, Poland.
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Źródło :
Genes [Genes (Basel)] 2021 Jun 03; Vol. 12 (6). Date of Electronic Publication: 2021 Jun 03.
Typ publikacji :
Research Support, Non-U.S. Gov't
MeSH Terms :
Breeding/*methods
DNA, Mitochondrial/*genetics
Ducks/*genetics
Genotyping Techniques/*methods
Polymerase Chain Reaction/*methods
Animals ; Genotyping Techniques/standards ; Reference Standards
Raport

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