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Tytuł :
The RSC complex remodels nucleosomes in transcribed coding sequences and promotes transcription in Saccharomyces cerevisiae.
Autorzy :
Biernat E; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Kinney J; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Dunlap K; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Rizza C; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
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Źródło :
Genetics [Genetics] 2021 Apr 15; Vol. 217 (4).
Typ publikacji :
Journal Article
Czasopismo naukowe
Tytuł :
Correction: Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.
Autorzy :
Qiu H; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Biernat E; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Rawal Y; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Chereji RV; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Clark DJ; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Hinnebusch AG; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Jan 11; Vol. 49 (1), pp. 599.
Typ publikacji :
Journal Article; Published Erratum
Czasopismo naukowe
Tytuł :
Transcriptomic Analysis of Naïve Human Embryonic Stem Cells Cultured in Three-Dimensional PEG Scaffolds.
Autorzy :
McKee C; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
Brown C; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
Bakshi S; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
Walker K; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
Chaudhry GR; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Rochester, MI 48309, USA.
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Źródło :
Biomolecules [Biomolecules] 2020 Dec 28; Vol. 11 (1). Date of Electronic Publication: 2020 Dec 28.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
Czasopismo naukowe
Tytuł :
Chromatin remodeler Ino80C acts independently of H2A.Z to evict promoter nucleosomes and stimulate transcription of highly expressed genes in yeast.
Autorzy :
Qiu H; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Biernat E; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Rawal Y; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Chereji RV; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Clark DJ; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Hinnebusch AG; Division of Molecular and Cellular Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2020 Sep 04; Vol. 48 (15), pp. 8408-8430.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Transcription, Genetic*
Histones/*genetics
Saccharomyces cerevisiae Proteins/*genetics
Transcriptional Activation/*genetics
Adenosine Triphosphatases/genetics ; Chromatin/genetics ; Chromatin Assembly and Disassembly/genetics ; DNA-Binding Proteins/genetics ; Gene Expression Regulation, Fungal/genetics ; Nucleosomes/genetics ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae Proteins/chemistry ; Transcription Factors/genetics
Czasopismo naukowe
Tytuł :
Mesenchymal stem cells: Cell therapy and regeneration potential.
Autorzy :
Brown C; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
McKee C; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
Bakshi S; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
Walker K; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
Hakman E; Department of Obstetrics and Gynecology, Ascension Providence Hospital, Southfield, MI, USA.
Halassy S; Department of Obstetrics and Gynecology, Ascension Providence Hospital, Southfield, MI, USA.
Svinarich D; Department of Obstetrics and Gynecology, Ascension Providence Hospital, Southfield, MI, USA.; Ascension Providence Hospital, Southfield, MI, USA.
Dodds R; Department of Obstetrics and Gynecology, Ascension Providence Hospital, Southfield, MI, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
Chaudhry GR; Department of Biological Sciences, Oakland University, Rochester, MI, USA.; OU-WB Institute for Stem Cell and Regenerative Medicine, Oakland University, Rochester, MI, USA.
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Źródło :
Journal of tissue engineering and regenerative medicine [J Tissue Eng Regen Med] 2019 Sep; Vol. 13 (9), pp. 1738-1755. Date of Electronic Publication: 2019 Jul 25.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Review
MeSH Terms :
Mesenchymal Stem Cell Transplantation*
Regeneration*
Mesenchymal Stem Cells/*cytology
Clinical Trials as Topic ; Fetus/cytology ; Humans
Czasopismo naukowe
Tytuł :
Acetylation-Dependent Recruitment of the FACT Complex and Its Role in Regulating Pol II Occupancy Genome-Wide in Saccharomyces cerevisiae .
Autorzy :
Pathak R; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085.
Singh P; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085.
Ananthakrishnan S; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085.
Adamczyk S; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085.
Schimmel O; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, Michigan 48085 govind@oakland.edu.
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Źródło :
Genetics [Genetics] 2018 Jul; Vol. 209 (3), pp. 743-756. Date of Electronic Publication: 2018 Apr 25.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA-Binding Proteins/*metabolism
High Mobility Group Proteins/*metabolism
RNA Polymerase II/*metabolism
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae Proteins/*metabolism
Transcriptional Elongation Factors/*metabolism
Acetylation ; Alcohol Dehydrogenase/genetics ; Arginase/genetics ; DNA-Binding Proteins/chemistry ; Gene Expression Regulation, Fungal ; High Mobility Group Proteins/chemistry ; Histones/metabolism ; Saccharomyces cerevisiae/metabolism ; Saccharomyces cerevisiae Proteins/chemistry ; Saccharomyces cerevisiae Proteins/genetics ; Transcription, Genetic ; Transcriptional Elongation Factors/chemistry ; Transcriptional Elongation Factors/genetics
Czasopismo naukowe
Tytuł :
SWI/SNF and RSC cooperate to reposition and evict promoter nucleosomes at highly expressed genes in yeast.
Autorzy :
Rawal Y; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
Chereji RV; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
Qiu H; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
Ananthakrishnan S; Department of Biological Science, Oakland University, Rochester, Michigan 48309, USA.
Govind CK; Department of Biological Science, Oakland University, Rochester, Michigan 48309, USA.
Clark DJ; Division of Developmental Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
Hinnebusch AG; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892, USA.
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Źródło :
Genes & development [Genes Dev] 2018 May 01; Vol. 32 (9-10), pp. 695-710. Date of Electronic Publication: 2018 May 21.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Chromosomal Proteins, Non-Histone/*metabolism
DNA-Binding Proteins/*metabolism
Nucleosomes/*metabolism
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Transcription Factors/*metabolism
Promoter Regions, Genetic/genetics ; Protein Binding ; Saccharomyces cerevisiae Proteins/genetics
Czasopismo naukowe
Tytuł :
Recruitment of Saccharomyces cerevisiae Cmr1/Ydl156w to Coding Regions Promotes Transcription Genome Wide.
Autorzy :
Jones JW; Department of Biological Sciences, Oakland University, Rochester, MI-48309, United States of America.
Singh P; Department of Biological Sciences, Oakland University, Rochester, MI-48309, United States of America.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI-48309, United States of America.
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Źródło :
PloS one [PLoS One] 2016 Feb 05; Vol. 11 (2), pp. e0148897. Date of Electronic Publication: 2016 Feb 05 (Print Publication: 2016).
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Transcription, Genetic*
DNA-Binding Proteins/*physiology
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae Proteins/*physiology
Cyclin-Dependent Kinases/metabolism ; Cyclin-Dependent Kinases/physiology ; DNA-Binding Proteins/genetics ; DNA-Binding Proteins/metabolism ; Genome, Fungal ; Histone Code ; Histone Deacetylases/metabolism ; Histone Deacetylases/physiology ; Histones/metabolism ; Open Reading Frames ; Saccharomyces cerevisiae/metabolism ; Saccharomyces cerevisiae Proteins/genetics ; Saccharomyces cerevisiae Proteins/metabolism
Czasopismo naukowe
Tytuł :
Interdependent recruitment of CYC8/TUP1 and the transcriptional activator XYR1 at target promoters is required for induced cellulase gene expression in Trichoderma reesei.
Autorzy :
Wang, Lei (AUTHOR)
Zhang, Weixin (AUTHOR)
Cao, Yanli (AUTHOR)
Zheng, Fanglin (AUTHOR)
Zhao, Guolei (AUTHOR)
Lv, Xinxing (AUTHOR)
Meng, Xiangfeng (AUTHOR)
Liu, Weifeng (AUTHOR)
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Źródło :
PLoS Genetics. 2/19/2021, Vol. 17 Issue 2, p1-22. 22p.
Czasopismo naukowe
Tytuł :
The RSC complex localizes to coding sequences to regulate Pol II and histone occupancy.
Autorzy :
Spain MM; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Ansari SA; Laboratory of Molecular Genetics, Wadsworth Center, NY State Department of Health, Albany, NY 12208, USA.
Pathak R; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA.
Palumbo MJ; Laboratory of Molecular Genetics, Wadsworth Center, NY State Department of Health, Albany, NY 12208, USA.
Morse RH; Laboratory of Molecular Genetics, Wadsworth Center, NY State Department of Health, Albany, NY 12208, USA.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, MI 48309, USA. Electronic address: govind@oakland.edu.
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Źródło :
Molecular cell [Mol Cell] 2014 Dec 04; Vol. 56 (5), pp. 653-66. Date of Electronic Publication: 2014 Nov 06.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA-Binding Proteins/*metabolism
Histones/*metabolism
RNA Polymerase II/*metabolism
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Transcription Factors/*metabolism
Chromatin Assembly and Disassembly ; Gene Expression Regulation, Fungal ; Open Reading Frames ; Stress, Physiological ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
Histone deacetylases and phosphorylated polymerase II C-terminal domain recruit Spt6 for cotranscriptional histone reassembly.
Autorzy :
Burugula BB; Department of Biological Sciences, Oakland University, Rochester, Michigan, USA.
Jeronimo C; Institut de recherches cliniques de Montréal, Montréal, Québec, Canada.
Pathak R; Department of Biological Sciences, Oakland University, Rochester, Michigan, USA.
Jones JW; Department of Biological Sciences, Oakland University, Rochester, Michigan, USA.
Robert F; Institut de recherches cliniques de Montréal, Montréal, Québec, Canada Département de Médecine, Faculté de Médecine, Université de Montréal, Montréal, Québec, Canada.
Govind CK; Department of Biological Sciences, Oakland University, Rochester, Michigan, USA govind@oakland.edu.
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Źródło :
Molecular and cellular biology [Mol Cell Biol] 2014 Nov 15; Vol. 34 (22), pp. 4115-29. Date of Electronic Publication: 2014 Sep 02.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
Histone Deacetylases/*metabolism
Histones/*metabolism
Nuclear Proteins/*metabolism
RNA Polymerase II/*metabolism
Saccharomyces cerevisiae/*genetics
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Transcriptional Elongation Factors/*metabolism
Cyclin-Dependent Kinases/metabolism ; Gene Expression Regulation, Fungal ; Genes, Fungal ; Histone Chaperones ; Phosphorylation ; Protein Interaction Maps ; Protein Kinases/metabolism ; Protein Structure, Tertiary ; RNA Polymerase II/chemistry ; Transcription, Genetic
Czasopismo naukowe
Tytuł :
The RSC (Remodels the Structure of Chromatin) complex of Candida albicans shows compositional divergence with distinct roles in regulating pathogenic traits.
Autorzy :
Balachandra, Vinutha K. (AUTHOR)
Verma, Jiyoti (AUTHOR)
Shankar, Madhu (AUTHOR)
Tucey, Timothy M. (AUTHOR)
Traven, Ana (AUTHOR)
Schittenhelm, Ralf B. (AUTHOR)
Ghosh, Santanu K. (AUTHOR)
Pokaż więcej
Źródło :
PLoS Genetics. 11/5/2020, Vol. 16 Issue 11, p1-25. 25p.
Czasopismo naukowe

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