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Tytuł:
Two decades of population genomics: will we ever agree on bacterial species?
Autorzy:
Hanage WP; Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, USA. .
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Źródło:
BMC biology [BMC Biol] 2024 Jan 26; Vol. 22 (1), pp. 20. Date of Electronic Publication: 2024 Jan 26.
Typ publikacji:
Letter
MeSH Terms:
Metagenomics*
Bacteria*/genetics
Genomics ; Genome, Bacterial
Opinia redakcyjna
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota.
Autorzy:
Petrone ME; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA. .
Rothman JE; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Breban MI; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Ott IM; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Russell A; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.
Lasek-Nesselquist E; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Biomedical Sciences, University at Albany, SUNY, Albany, NY, 12222, USA.
Badr H; Department of Civil and Systems Engineering, Johns Hopkins University, Baltimore, 21218, MD, USA.
Kelly K; The Jackson Laboratory for Genomic Medicine, Farmington, CT, 06032, USA.
Omerza G; The Jackson Laboratory for Genomic Medicine, Farmington, CT, 06032, USA.
Renzette N; The Jackson Laboratory for Genomic Medicine, Farmington, CT, 06032, USA.
Watkins AE; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Kalinich CC; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Alpert T; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Brito AF; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Earnest R; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Tikhonova IR; Yale Center for Genome Analysis, Yale University, New Haven, CT, 06510, USA.
Castaldi C; Yale Center for Genome Analysis, Yale University, New Haven, CT, 06510, USA.
Kelly JP; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.
Shudt M; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.
Plitnick J; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Biomedical Sciences, University at Albany, SUNY, Albany, NY, 12222, USA.
Schneider E; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Biomedical Sciences, University at Albany, SUNY, Albany, NY, 12222, USA.
Murphy S; Murphy Medical Associates, Greenwich, CT, 06830, USA.
Neal C; Murphy Medical Associates, Greenwich, CT, 06830, USA.
Laszlo E; Murphy Medical Associates, Greenwich, CT, 06830, USA.
Altajar A; Murphy Medical Associates, Greenwich, CT, 06830, USA.
Pearson C; Connecticut State Department of Public Health, Rocky Hill, CT, 06067, USA.
Muyombwe A; Connecticut State Department of Public Health, Rocky Hill, CT, 06067, USA.
Downing R; Connecticut State Department of Public Health, Rocky Hill, CT, 06067, USA.
Razeq J; Connecticut State Department of Public Health, Rocky Hill, CT, 06067, USA.
Niccolai L; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Wilson MS; Yale Health Center, Yale University, New Haven, CT, 06510, USA.
Anderson ML; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Wang J; Department of Pathology, Yale University School of Medicine, New Haven, CT, 06510, USA.
Liu C; Department of Pathology, Yale University School of Medicine, New Haven, CT, 06510, USA.
Hui P; Department of Pathology, Yale University School of Medicine, New Haven, CT, 06510, USA.
Mane S; Yale Center for Genome Analysis, Yale University, New Haven, CT, 06510, USA.
Taylor BP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, MA, 02115, USA.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, MA, 02115, USA.
Landry ML; Departments of Laboratory Medicine and Medicine, Yale University School of Medicine, New Haven, CT, 06510, USA.
Peaper DR; Departments of Laboratory Medicine and Medicine, Yale University School of Medicine, New Haven, CT, 06510, USA.
Bilguvar K; Yale Center for Genome Analysis, Yale University, New Haven, CT, 06510, USA.; Department of Genetics, Yale University School of Medicine, New Haven, CT, 06510, USA.
Fauver JR; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Vogels CBF; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Gardner LM; Department of Civil and Systems Engineering, Johns Hopkins University, Baltimore, 21218, MD, USA.
Pitzer VE; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
St George K; Wadsworth Center, New York State Department of Health, Albany, NY, 12208, USA.; Department of Biomedical Sciences, University at Albany, SUNY, Albany, NY, 12222, USA.
Adams MD; The Jackson Laboratory for Genomic Medicine, Farmington, CT, 06032, USA.
Grubaugh ND; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA. .; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06510, USA. .
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Źródło:
Communications biology [Commun Biol] 2022 May 11; Vol. 5 (1), pp. 439. Date of Electronic Publication: 2022 May 11.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, P.H.S.
MeSH Terms:
COVID-19*/epidemiology
SARS-CoV-2*/genetics
Genomics ; Humans ; Pandemics ; United States/epidemiology
SCR Organism:
SARS-CoV-2 variants
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Coronavirus Disease 2019 Vaccine Impact on Rates of Severe Acute Respiratory Syndrome Coronavirus 2 Cases and Postvaccination Strain Sequences Among Health Care Workers at an Urban Academic Medical Center: A Prospective Cohort Study.
Autorzy:
Bouton TC; Section of Infectious Diseases, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Lodi S; Department of Biostatistics, Boston University School of Public Health, Boston, Massachusetts, USA.
Turcinovic J; National Emerging Infectious Diseases Laboratories, Boston University, Boston, Massachusetts, USA.
Schaeffer B; Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, Massachusetts, USA.
Weber SE; Section of Infectious Diseases, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Quinn E; Biostatistics and Epidemiology Data Analytics Center, Boston University School of Public Health, Boston, Massachusetts, USA.
Korn C; Department of Infection Control, Boston Medical Center, Boston, Massachusetts, USA.
Steiner J; Department of Infection Control, Boston Medical Center, Boston, Massachusetts, USA.
Schechter-Perkins EM; Department of Emergency Medicine, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Duffy E; Department of Pathology and Laboratory Medicine, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Ragan EJ; Section of Infectious Diseases, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Taylor BP; Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, Massachusetts, USA.
Miller N; Department of Pathology and Laboratory Medicine, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
Davidoff R; Boston Medical Center and Boston University School of Medicine, Boston, Massachusetts, USA.
Hanage WP; Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, Massachusetts, USA.
Connor J; National Emerging Infectious Diseases Laboratories, Boston University, Boston, Massachusetts, USA.; Department of Microbiology, Boston University School of Medicine, Boston, Massachusetts, USA.
Pierre C; Section of Infectious Diseases, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.; Department of Infection Control, Boston Medical Center, Boston, Massachusetts, USA.
Jacobson KR; Section of Infectious Diseases, Boston University School of Medicine and Boston Medical Center, Boston, Massachusetts, USA.
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Źródło:
Open forum infectious diseases [Open Forum Infect Dis] 2021 Sep 17; Vol. 8 (10), pp. ofab465. Date of Electronic Publication: 2021 Sep 17 (Print Publication: 2021).
Typ publikacji:
Journal Article
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Optimal SARS-CoV-2 vaccine allocation using real-time attack-rate estimates in Rhode Island and Massachusetts.
Autorzy:
Tran TN; Center for Infectious Disease Dynamics, Department of Biology, Pennsylvania State University, University Park, PA, USA. .
Wikle NB; Center for Infectious Disease Dynamics, Department of Statistics, Pennsylvania State University, University Park, PA, USA.
Albert E; Department of Physics, Pennsylvania State University, University Park, PA, USA.
Inam H; Center for Infectious Disease Dynamics, Department of Bioengineering, Pennsylvania State University, University Park, PA, USA.
Strong E; Center for Infectious Disease Dynamics, Department of Statistics, Pennsylvania State University, University Park, PA, USA.
Brinda K; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, MA, USA.; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Leighow SM; Center for Infectious Disease Dynamics, Department of Bioengineering, Pennsylvania State University, University Park, PA, USA.
Yang F; Center for Infectious Disease Dynamics, Department of Biology, Pennsylvania State University, University Park, PA, USA.
Hossain S; Yale School of Medicine, Yale University, New Haven, CT, USA.
Pritchard JR; Center for Infectious Disease Dynamics, Department of Bioengineering, Pennsylvania State University, University Park, PA, USA.
Chan P; Department of Medicine, Brown University, Providence, RI, USA.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, MA, USA.
Hanks EM; Center for Infectious Disease Dynamics, Department of Statistics, Pennsylvania State University, University Park, PA, USA.
Boni MF; Center for Infectious Disease Dynamics, Department of Biology, Pennsylvania State University, University Park, PA, USA.
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Źródło:
BMC medicine [BMC Med] 2021 Jul 13; Vol. 19 (1), pp. 162. Date of Electronic Publication: 2021 Jul 13.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
COVID-19*/epidemiology
COVID-19*/prevention & control
Vaccination*/methods
Vaccination*/statistics & numerical data
Vaccination Coverage*/statistics & numerical data
Vaccination Coverage*/supply & distribution
COVID-19 Vaccines/*supply & distribution
Communicable Disease Control/*organization & administration
Health Care Rationing/*organization & administration
Resource Allocation/*organization & administration
Age Factors ; Humans ; Incidence ; Massachusetts/epidemiology ; Models, Theoretical ; Public Health/methods ; Public Health/standards ; Rhode Island/epidemiology ; SARS-CoV-2
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Partial immunity and SARS-CoV-2 mutations.
Autorzy:
Hanage WP; Department of Epidemiology, Harvard University T. H. Chan School of Public Health, Boston, MA 02115, USA. w.hanage@hsph.harvard.edu .
Russell CA; Department of Medical Microbiology, Amsterdam University Medical Center, Amsterdam, Netherlands. w.hanage@hsph.harvard.edu .
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Źródło:
Science (New York, N.Y.) [Science] 2021 Apr 23; Vol. 372 (6540), pp. 354.
Typ publikacji:
Letter; Comment
MeSH Terms:
COVID-19*
SARS-CoV-2*
COVID-19 Vaccines ; Humans ; Mutation ; Spike Glycoprotein, Coronavirus
Opinia redakcyjna
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events.
Autorzy:
Lemieux JE; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA. .; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Siddle KJ; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Shaw BM; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Loreth C; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Schaffner SF; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.
Gladden-Young A; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Adams G; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Fink T; Massachusetts Department of Public Health, Boston, MA, USA.
Tomkins-Tinch CH; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Krasilnikova LA; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
DeRuff KC; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Rudy M; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Bauer MR; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Harvard Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA 02115, USA.
Lagerborg KA; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Harvard Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA 02115, USA.
Normandin E; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Systems Biology, Harvard Medical School, Boston, MA, USA.
Chapman SB; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Reilly SK; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Anahtar MN; Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.
Lin AE; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Carter A; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Myhrvold C; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Kemball ME; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Department of Systems Biology, Harvard Medical School, Boston, MA, USA.
Chaluvadi S; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Cusick C; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Flowers K; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Neumann A; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Cerrato F; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Farhat M; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; Division of Pulmonary and Critical Care, Massachusetts General Hospital, Boston, MA, USA.
Slater D; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Harris JB; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.
Branda JA; Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.
Hooper D; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.
Gaeta JM; Institute for Research, Quality, and Policy in Homeless Health Care, Boston Health Care for the Homeless Program, Boston, MA, USA.; Section of General Internal Medicine, Boston University Medical Center, Boston, MA, USA.
Baggett TP; Institute for Research, Quality, and Policy in Homeless Health Care, Boston Health Care for the Homeless Program, Boston, MA, USA.; Division of General Internal Medicine, Massachusetts General Hospital, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.
O'Connell J; Institute for Research, Quality, and Policy in Homeless Health Care, Boston Health Care for the Homeless Program, Boston, MA, USA.; Division of General Internal Medicine, Massachusetts General Hospital, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.
Gnirke A; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Lieberman TD; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Institute for Medical Engineering and Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Philippakis A; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
Burns M; Massachusetts Department of Public Health, Boston, MA, USA.
Brown CM; Massachusetts Department of Public Health, Boston, MA, USA.
Luban J; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.; Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.; Massachusetts Consortium on Pathogen Readiness, Boston, MA 02115, USA.
Ryan ET; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.; Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.
Turbett SE; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.; Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.
LaRocque RC; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.; Department of Medicine, Harvard Medical School, Boston, MA, USA.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Boston, MA 02115, USA.
Gallagher GR; Massachusetts Department of Public Health, Boston, MA, USA.
Madoff LC; Massachusetts Department of Public Health, Boston, MA, USA.; University of Massachusetts Medical School, Infectious Diseases and Immunology, Worcester, MA 01655, USA.
Smole S; Massachusetts Department of Public Health, Boston, MA, USA.
Pierce VM; Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.; Pediatric Infectious Disease Unit, Massachusetts General Hospital for Children, Boston, MA, USA.; Department of Pathology, Harvard Medical School, Boston, MA, USA.
Rosenberg E; Division of Infectious Diseases, Massachusetts General Hospital, Boston, MA, USA.; Department of Pathology, Massachusetts General Hospital, Boston, MA, USA.
Sabeti PC; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA. .; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.; Massachusetts Consortium on Pathogen Readiness, Boston, MA 02115, USA.; Howard Hughes Medical Institute, 4000 Jones Bridge Rd, Chevy Chase, MD 20815, USA.
Park DJ; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA.
MacInnis BL; Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA 02142, USA. .; Department of Immunology and Infectious Diseases, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.; Massachusetts Consortium on Pathogen Readiness, Boston, MA 02115, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2021 Feb 05; Vol. 371 (6529). Date of Electronic Publication: 2020 Dec 10.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Genome, Viral*
Phylogeny*
COVID-19/*epidemiology
SARS-CoV-2/*genetics
Boston/epidemiology ; COVID-19/transmission ; Disease Outbreaks ; Epidemiological Monitoring ; Humans
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Frequency-dependent selection can forecast evolution in Streptococcus pneumoniae.
Autorzy:
Azarian T; Burnett School of Biomedical Sciences, University of Central Florida, Orlando, Florida, United States of America.; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Martinez PP; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Arnold BJ; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Qiu X; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Grant LR; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Corander J; Helsinki Institute for Information Technology, Department of Mathematics and Statistics, University of Helsinki, Helsinki, Finland.; Department of Biostatistics, University of Oslo, Oslo, Norway.; Infection Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
Fraser C; Big Data Institute, Nuffield Department of Medicine, University of Oxford, Oxford, United Kingdom.
Croucher NJ; MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom.
Hammitt LL; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Reid R; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Santosham M; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Weatherholtz RC; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Bentley SD; Infection Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, United Kingdom.
O'Brien KL; World Health Organization, Geneva, Switzerland.
Lipsitch M; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.; Department of Immunology and Infectious Diseases, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
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Źródło:
PLoS biology [PLoS Biol] 2020 Oct 22; Vol. 18 (10), pp. e3000878. Date of Electronic Publication: 2020 Oct 22 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Directed Molecular Evolution*
Streptococcus pneumoniae/*physiology
Computer Simulation ; Models, Biological ; Pneumococcal Vaccines/immunology ; Streptococcus pneumoniae/immunology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The effect of human mobility and control measures on the COVID-19 epidemic in China.
Autorzy:
Kraemer MUG; Department of Zoology, University of Oxford, Oxford, UK. .; Harvard Medical School, Harvard University, Boston, MA, USA.; Boston Children's Hospital, Boston, MA, USA.
Yang CH; Network Science Institute, Northeastern University, Boston, MA, USA.
Gutierrez B; Department of Zoology, University of Oxford, Oxford, UK.; School of Biological and Environmental Sciences, Universidad San Francisco de Quito USFQ, Quito, Ecuador.
Wu CH; Mathematical Sciences, University of Southampton, Southampton, UK.
Klein B; Network Science Institute, Northeastern University, Boston, MA, USA.
Pigott DM; Institute for Health Metrics and Evaluation, Department of Health Metrics, University of Washington, Seattle, WA, USA.
du Plessis L; Department of Zoology, University of Oxford, Oxford, UK.
Faria NR; Department of Zoology, University of Oxford, Oxford, UK.
Li R; Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Hanage WP; Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Brownstein JS; Harvard Medical School, Harvard University, Boston, MA, USA.; Boston Children's Hospital, Boston, MA, USA.
Layan M; Mathematical Modelling of Infectious Diseases Unit, Institut Pasteur, UMR2000, CNRS, Paris, France.; Sorbonne Université, Paris, France.
Vespignani A; Network Science Institute, Northeastern University, Boston, MA, USA.; ISI Foundation, Turin, Italy.
Tian H; State Key Laboratory of Remote Sensing Science, College of Global Change and Earth System Science, Beijing Normal University, Beijing, China.
Dye C; Department of Zoology, University of Oxford, Oxford, UK.
Pybus OG; Department of Zoology, University of Oxford, Oxford, UK. .; Department of Pathobiology and Population Sciences, The Royal Veterinary College, London, UK.
Scarpino SV; Network Science Institute, Northeastern University, Boston, MA, USA. .
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Corporate Authors:
Open COVID-19 Data Working Group
Źródło:
Science (New York, N.Y.) [Science] 2020 May 01; Vol. 368 (6490), pp. 493-497. Date of Electronic Publication: 2020 Mar 25.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Coronavirus Infections/*epidemiology
Pneumonia, Viral/*epidemiology
Travel/*statistics & numerical data
Age Distribution ; Betacoronavirus ; COVID-19 ; China ; Coronavirus Infections/prevention & control ; Coronavirus Infections/transmission ; Epidemiological Monitoring ; Humans ; Linear Models ; Pandemics/prevention & control ; Pneumonia, Viral/prevention & control ; Pneumonia, Viral/transmission ; SARS-CoV-2 ; Sex Distribution ; Spatial Analysis
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci.
Autorzy:
Azarian T; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Mitchell PK; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Georgieva M; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Thompson CM; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
Ghouila A; Institut Pasteur de Tunis, LR11IPT02, Laboratory of Transmission, Control and Immunobiology of Infections (LTCII), Tunis-Belvédère, Tunisia.
Pollard AJ; Oxford Vaccine Group, Department of Paediatrics, University of Oxford; NIHR Oxford Biomedical Research Centre, Centre for Clinical Vaccinology and Tropical Medicine (CCVTM), Churchill Hospital, Oxford, United Kingdom.
von Gottberg A; Centre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
du Plessis M; Centre for Respiratory Diseases and Meningitis, National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
Antonio M; Medical Research Council Unit The Gambia, Fajara, The Gambia.
Kwambana-Adams BA; Medical Research Council Unit The Gambia, Fajara, The Gambia.
Clarke SC; Faculty of Medicine and Institute for Life Sciences and Global Health Research Institute, University of Southampton, Southampton, United Kingdom.; NIHR Southampton Biomedical Research Centre, Southampton General Hospital, Southampton, United Kingdom.
Everett D; Queens Research Institute, University of Edinburgh, Edinburgh, United Kingdom.
Cornick J; Institute of Infection and Global Health, University of Liverpool, Liverpool, United Kingdom.
Sadowy E; National Medicines Institute, Warsaw, Poland.
Hryniewicz W; National Medicines Institute, Warsaw, Poland.
Skoczynska A; National Medicines Institute, Warsaw, Poland.
Moïsi JC; Pfizer Vaccines, Medical Development, Scientific and Clinical Affairs, Paris, France.
McGee L; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Beall B; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Metcalf BJ; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, United States of America.
Breiman RF; Global Health Institute, Emory University, Atlanta, Georgia, United States of America.
Ho PL; Department of Microbiology, Queen Mary Hospital University of Hong Kong, Hong Kong, People's Republic of China.
Reid R; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
O'Brien KL; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.
Gladstone RA; Wellcome Trust, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom.
Bentley SD; Wellcome Trust, Wellcome Trust Genome Campus, Hinxton, Cambridge, United Kingdom.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University, Boston, Massachusetts, United States of America.
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Źródło:
PLoS pathogens [PLoS Pathog] 2018 Nov 26; Vol. 14 (11), pp. e1007438. Date of Electronic Publication: 2018 Nov 26 (Print Publication: 2018).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Pneumococcal Infections/*immunology
Streptococcus pneumoniae/*genetics
Streptococcus pneumoniae/*immunology
Bayes Theorem ; Carrier State/epidemiology ; Evolution, Molecular ; Genetics, Population/methods ; Humans ; Phylogeny ; Pneumococcal Infections/transmission ; Pneumococcal Vaccines/immunology ; Population Dynamics ; Prevalence ; Serogroup ; Serotyping/methods ; Streptococcus pneumoniae/pathogenicity ; Vaccines, Conjugate ; Whole Genome Sequencing/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
From bacterial genomics to clinical epidemiology: an interview with Bill Hanage.
Autorzy:
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, USA. .
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Źródło:
BMC biology [BMC Biol] 2018 Nov 01; Vol. 16 (1), pp. 122. Date of Electronic Publication: 2018 Nov 01.
Typ publikacji:
Biography; Historical Article; Interview; Portrait
MeSH Terms:
Genome, Bacterial*
Clinical Medicine/*history
Epidemiology/*history
Genomics/*history
History, 21st Century ; Massachusetts ; Microbiota/genetics ; Peer Review, Research ; Selection, Genetic
Personal Name as Subject:
Hanage B
Biography
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Evolution via recombination: Cell-to-cell contact facilitates larger recombination events in Streptococcus pneumoniae.
Autorzy:
Cowley LA; Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, United States of America.
Petersen FC; Department of Oral Biology, University of Oslo, Oslo, Norway.
Junges R; Department of Oral Biology, University of Oslo, Oslo, Norway.
Jimson D Jimenez M; Department of Biological Sciences, University of Illinois at Chicago, Chicago, United States of America.
Morrison DA; Department of Biological Sciences, University of Illinois at Chicago, Chicago, United States of America.
Hanage WP; Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2018 Jun 13; Vol. 14 (6), pp. e1007410. Date of Electronic Publication: 2018 Jun 13 (Print Publication: 2018).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Cell Communication/*genetics
Recombination, Genetic/*genetics
Streptococcus pneumoniae/*genetics
Cell Communication/physiology ; DNA/genetics ; DNA/physiology ; Evolution, Molecular ; Gene Rearrangement/genetics ; Genome, Bacterial/genetics ; Homologous Recombination/genetics ; Polymorphism, Single Nucleotide/genetics ; Whole Genome Sequencing/methods
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
The impact of serotype-specific vaccination on phylodynamic parameters of Streptococcus pneumoniae and the pneumococcal pan-genome.
Autorzy:
Azarian T; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University; Cambridge, Massachusetts, United States of America.
Grant LR; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Arnold BJ; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University; Cambridge, Massachusetts, United States of America.
Hammitt LL; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Reid R; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Santosham M; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Weatherholtz R; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Goklish N; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Thompson CM; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University; Cambridge, Massachusetts, United States of America.
Bentley SD; Wellcome Trust Sanger Institute, Cambridge, United Kingdom.
O'Brien KL; Center for American Indian Health, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; United States of America.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University; Cambridge, Massachusetts, United States of America.
Lipsitch M; Center for Communicable Disease Dynamics, Department of Epidemiology, T.H. Chan School of Public Health, Harvard University; Cambridge, Massachusetts, United States of America.
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Źródło:
PLoS pathogens [PLoS Pathog] 2018 Apr 04; Vol. 14 (4), pp. e1006966. Date of Electronic Publication: 2018 Apr 04 (Print Publication: 2018).
Typ publikacji:
Journal Article; Observational Study; Randomized Controlled Trial; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Bacterial*
Serogroup*
Heptavalent Pneumococcal Conjugate Vaccine/*administration & dosage
Pneumococcal Infections/*prevention & control
Pneumococcal Vaccines/*administration & dosage
Streptococcus pneumoniae/*immunology
Adolescent ; Adult ; Aged ; Child ; Genetics, Population ; Humans ; Middle Aged ; Nasopharynx/microbiology ; Phylogeny ; Pneumococcal Infections/epidemiology ; Pneumococcal Infections/immunology ; Pneumococcal Infections/microbiology ; Population Dynamics ; Prospective Studies ; Serotyping ; Streptococcus pneumoniae/genetics ; Vaccination ; Young Adult
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Use of Genome Sequencing to Define Institutional Influenza Outbreaks, Toronto, Ontario, Canada, 2014-15.
Autorzy:
MacFadden DR
McGeer A
Athey T
Perusini S
Olsha R
Li A
Eshaghi A
Gubbay JB
Hanage WP
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Źródło:
Emerging infectious diseases [Emerg Infect Dis] 2018 Mar; Vol. 24 (3), pp. 492-497.
Typ publikacji:
Historical Article; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Viral*
Genomics*/methods
Influenza A virus/*genetics
Influenza, Human/*epidemiology
Influenza, Human/*virology
Disease Outbreaks ; High-Throughput Nucleotide Sequencing ; History, 21st Century ; Humans ; Influenza A virus/classification ; Influenza, Human/history ; Ontario ; Phylogeny ; Public Health Surveillance ; ROC Curve ; Retrospective Studies ; Seasons
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Speciation trajectories in recombining bacterial species.
Autorzy:
Marttinen P; Helsinki Institute for Information Technology HIIT, Department of Computer Science, Aalto University, Espoo, Finland.; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, MA, USA.
Hanage WP; Center for Communicable Disease Dynamics, Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, MA, USA.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2017 Jul 03; Vol. 13 (7), pp. e1005640. Date of Electronic Publication: 2017 Jul 03 (Print Publication: 2017).
Typ publikacji:
Journal Article
MeSH Terms:
Evolution, Molecular*
Genetic Speciation*
Models, Genetic*
Bacteria/*genetics
Cluster Analysis ; Ecosystem ; Genetic Variation ; Recombination, Genetic
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Understanding pneumococcal serotype 1 biology through population genomic analysis.
Autorzy:
Chaguza C; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK. .; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi. .
Cornick JE; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi.
Harris SR; Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, UK.
Andam CP; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T. H. Chan School of Public Health, Massachusetts, MA, 02115, USA.
Bricio-Moreno L; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.
Yang M; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.
Yalcin F; Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, UK.
Ousmane S; Unité de Biologie, Centre de Recherche Médicale et Sanitaire (CERMES), Niamey, Niger.
Govindpersad S; National Institute for Communicable Diseases (NICD), Johannesburg, South Africa.
Senghore M; Bacterial Diseases Programme, Medical Research Council (MRC), Banjul, The Gambia.; Division of Translational and Systems Medicine, Warwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.
Ebruke C; Bacterial Diseases Programme, Medical Research Council (MRC), Banjul, The Gambia.; Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK.
Du Plessis M; National Institute for Communicable Diseases (NICD), Johannesburg, South Africa.
Kiran AM; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi.
Pluschke G; Swiss Tropical and Public Health Institute, Basel, Switzerland.
Sigauque B; Centro de Investigação em Saúde da Manhiça, Maputo, Mozambique.
McGee L; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, GA 30329, USA.
Klugman KP; Hubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA.; Bill and Melinda Gates Foundation, Seattle, WA, 98109, USA.
Turner P; Cambodia Oxford Medical Research Unit, Angkor Hospital for Children, Siem Reap, Cambodia.; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7FZ, UK.
Corander J; Department of Mathematics and Statistics, University of Helsinki, Helsinki, Finland.
Parkhill J; Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, UK.
Collard JM; Unité de Biologie, Centre de Recherche Médicale et Sanitaire (CERMES), Niamey, Niger.
Antonio M; Bacterial Diseases Programme, Medical Research Council (MRC), Banjul, The Gambia.; Division of Translational and Systems Medicine, Warwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.; Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UK.
von Gottberg A; National Institute for Communicable Diseases (NICD), Johannesburg, South Africa.; School of Pathology, University of the Witwatersrand, Johannesburg, South Africa.
Heyderman RS; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi.; Division of Infection and Immunity, University College London, London, WC1E 6BT, UK.
French N; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi.
Kadioglu A; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.
Hanage WP; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T. H. Chan School of Public Health, Massachusetts, MA, 02115, USA.
Everett DB; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK.; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Queen Elizabeth Central Hospital, Blantyre, Malawi.
Bentley SD; Department of Clinical Infection, Microbiology and Immunology, Institute of Infection and Global Health, University of Liverpool, Liverpool, L69 7BE, UK. .; Pathogen Genomics, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SA, UK. .
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Corporate Authors:
PAGe Consortium
Źródło:
BMC infectious diseases [BMC Infect Dis] 2016 Nov 08; Vol. 16 (1), pp. 649. Date of Electronic Publication: 2016 Nov 08.
Typ publikacji:
Journal Article
MeSH Terms:
Pneumococcal Infections/*microbiology
Streptococcus pneumoniae/*genetics
Africa ; Asia ; Drug Resistance, Bacterial/genetics ; Genetic Variation ; Humans ; Nasopharynx/microbiology ; Phylogeny ; Pneumococcal Infections/epidemiology ; Recombination, Genetic ; Selection, Genetic ; Serogroup ; Streptococcus pneumoniae/drug effects ; Streptococcus pneumoniae/isolation & purification ; Tetracycline Resistance/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Tytuł:
Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus.
Autorzy:
Chang HH; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, USA. .
Dordel J; Pathogen Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SA, UK. .; Department of Biology, Drexel University, Philadelphia, PA, USA. .
Donker T; Nuffield Department of Medicine, University of Oxford, Oxford, UK. .
Worby CJ; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, USA. .
Feil EJ; Department of Biology and Biochemistry, University of Bath, Bath, BA2 7AY, UK. .
Hanage WP; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, USA. .
Bentley SD; Pathogen Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, CB10 1SA, UK. .
Huang SS; Division of Infectious Diseases and Health Policy Research Institute, University of California Irvine School of Medicine, Irvine, CA, USA. .
Lipsitch M; Department of Epidemiology, Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, USA. .
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Źródło:
Genome medicine [Genome Med] 2016 Feb 13; Vol. 8 (1), pp. 18. Date of Electronic Publication: 2016 Feb 13.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Cross Infection/*transmission
Methicillin-Resistant Staphylococcus aureus/*genetics
Sequence Analysis, DNA/*methods
Staphylococcal Infections/*transmission
California/epidemiology ; Computer Simulation ; Cross Infection/microbiology ; Gene Flow ; Genetic Variation ; Genome, Bacterial ; Humans ; Methicillin-Resistant Staphylococcus aureus/isolation & purification ; Phylogeny ; Staphylococcal Infections/microbiology
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknieSzczegóły
Wyświetlanie 1-20 z 48

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