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Wyszukujesz frazę ""Holliday"" wg kryterium: Temat


Tytuł :
Biochemical and structural characterization of the Holliday junction resolvase RuvC from Pseudomonas aeruginosa.
Autorzy :
Hu Y; College of Chemistry, Fuzhou University, Fuzhou, 350108, China.
He Y; College of Chemistry, Fuzhou University, Fuzhou, 350108, China.
Lin Z; College of Chemistry, Fuzhou University, Fuzhou, 350108, China. Electronic address: .
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Źródło :
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2020 Apr 30; Vol. 525 (2), pp. 265-271. Date of Electronic Publication: 2020 Feb 19.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Crystallography, X-Ray/*methods
DNA, Cruciform/*metabolism
Holliday Junction Resolvases/*chemistry
Pseudomonas aeruginosa/*enzymology
Amino Acid Sequence ; Bacterial Proteins/chemistry ; Biocatalysis ; Holliday Junction Resolvases/genetics ; Holliday Junction Resolvases/metabolism ; Homologous Recombination ; Mutagenesis ; Protein Multimerization ; Protein Stability
Czasopismo naukowe
Tytuł :
The extracellular DNA lattice of bacterial biofilms is structurally related to Holliday junction recombination intermediates.
Autorzy :
Devaraj A; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205.
Buzzo JR; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205.
Mashburn-Warren L; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205.
Gloag ES; Department of Orthopedics, The Ohio State University, Columbus, OH 43210.
Novotny LA; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205.
Stoodley P; Department of Orthopedics, The Ohio State University, Columbus, OH 43210.; Department of Microbial Infection and Immunity, The Ohio State University, Columbus, OH 43210.; National Centre for Advanced Tribology at Southampton, University of Southampton, Southampton SO17 1BJ, United Kingdom.
Bakaletz LO; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205.; Department of Pediatrics, College of Medicine, The Ohio State University, Columbus, Ohio 43210.
Goodman SD; Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205; .; Department of Pediatrics, College of Medicine, The Ohio State University, Columbus, Ohio 43210.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2019 Dec 10; Vol. 116 (50), pp. 25068-25077. Date of Electronic Publication: 2019 Nov 25.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms :
Biofilms*
DNA, Cruciform*/chemistry
DNA, Cruciform*/metabolism
Extracellular Matrix*/chemistry
Extracellular Matrix*/metabolism
Holliday Junction Resolvases*/chemistry
Holliday Junction Resolvases*/metabolism
Recombination, Genetic*
Animals ; Bacterial Proteins/chemistry ; Bacterial Proteins/metabolism ; Chinchilla ; DNA Helicases ; DNA-Binding Proteins ; Disease Models, Animal ; Escherichia coli Proteins ; Otitis Media
Czasopismo naukowe
Tytuł :
Single bacterial resolvases first exploit, then constrain intrinsic dynamics of the Holliday junction to direct recombination.
Autorzy :
Ray S; Single Molecule Analysis Group, Department of Chemistry, University of Michigan Ann Arbor, MI 48109, USA.
Pal N; Single Molecule Analysis Group, Department of Chemistry, University of Michigan Ann Arbor, MI 48109, USA.
Walter NG; Single Molecule Analysis Group, Department of Chemistry, University of Michigan Ann Arbor, MI 48109, USA.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2021 Mar 18; Vol. 49 (5), pp. 2803-2815.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Homologous Recombination*
DNA Helicases/*metabolism
DNA, Cruciform/*chemistry
Escherichia coli Proteins/*metabolism
Holliday Junction Resolvases/*metabolism
DNA Cleavage ; Fluorescence Resonance Energy Transfer ; Magnesium
Czasopismo naukowe
Tytuł :
Structural basis of sequence-specific Holliday junction cleavage by MOC1.
Autorzy :
Lin H; College of Chemistry, Fuzhou University, Fuzhou, China.
Zhang D; College of Chemistry, Fuzhou University, Fuzhou, China.
Zuo K; College of Chemistry, Fuzhou University, Fuzhou, China.
Yuan C; College of Biological Science and Engineering, Fuzhou University, Fuzhou, China.
Li J; College of Chemistry, Fuzhou University, Fuzhou, China. .
Huang M; College of Chemistry, Fuzhou University, Fuzhou, China. .
Lin Z; College of Chemistry, Fuzhou University, Fuzhou, China. .
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Źródło :
Nature chemical biology [Nat Chem Biol] 2019 Dec; Vol. 15 (12), pp. 1241-1248. Date of Electronic Publication: 2019 Oct 14.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chloroplasts/*metabolism
Holliday Junction Resolvases/*metabolism
Plant Proteins/*metabolism
Holliday Junction Resolvases/chemistry ; Molecular Dynamics Simulation ; Protein Conformation ; Substrate Specificity
Czasopismo naukowe
Tytuł :
ATRX and RECQ5 define distinct homologous recombination subpathways.
Autorzy :
Elbakry A; Radiation Biology and DNA Repair, Technical University of Darmstadt, 64287 Darmstadt, Germany.
Juhász S; Radiation Biology and DNA Repair, Technical University of Darmstadt, 64287 Darmstadt, Germany.
Chan KC; Radiation Biology and DNA Repair, Technical University of Darmstadt, 64287 Darmstadt, Germany.
Löbrich M; Radiation Biology and DNA Repair, Technical University of Darmstadt, 64287 Darmstadt, Germany .
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2021 Jan 19; Vol. 118 (3).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
DNA-Binding Proteins/*genetics
Endonucleases/*genetics
Homologous Recombination/*genetics
RecQ Helicases/*genetics
X-linked Nuclear Protein/*genetics
Cell Proliferation/genetics ; Chromatin Assembly and Disassembly/genetics ; DNA Breaks, Double-Stranded ; DNA Repair/genetics ; DNA, Cruciform/genetics ; Holliday Junction Resolvases/genetics ; Humans ; Proliferating Cell Nuclear Antigen/genetics ; Radiation, Ionizing ; Signal Transduction/genetics
Czasopismo naukowe
Tytuł :
Holliday Junction Resolution.
Autorzy :
Carreira R; Departamento de Bioquímica e Bioloxía Molecular, CIMUS, Universidade de Santiago de Compostela-Instituto de Investigación Sanitaria (IDIS), Santiago de Compostela, Spain.
Aguado FJ; Departamento de Bioquímica e Bioloxía Molecular, CIMUS, Universidade de Santiago de Compostela-Instituto de Investigación Sanitaria (IDIS), Santiago de Compostela, Spain.
Lama-Diaz T; Departamento de Bioquímica e Bioloxía Molecular, CIMUS, Universidade de Santiago de Compostela-Instituto de Investigación Sanitaria (IDIS), Santiago de Compostela, Spain.
Blanco MG; Departamento de Bioquímica e Bioloxía Molecular, CIMUS, Universidade de Santiago de Compostela-Instituto de Investigación Sanitaria (IDIS), Santiago de Compostela, Spain. .
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Źródło :
Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2153, pp. 169-185.
Typ publikacji :
Journal Article
MeSH Terms :
DNA/*metabolism
Holliday Junction Resolvases/*metabolism
Saccharomyces cerevisiae/*metabolism
Saccharomyces cerevisiae Proteins/*metabolism
Chromosome Segregation ; DNA/chemistry ; Meiosis ; Phosphorylation ; Protein Processing, Post-Translational ; Recombinational DNA Repair
Czasopismo naukowe
Tytuł :
Junction resolving enzymes use multivalency to keep the Holliday junction dynamic.
Autorzy :
Zhou R; Department of Physics and Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign, Champaign, IL, USA. .; Department of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, USA. .
Yang O; Department of Biophysics and Biophysical Chemistry, Johns Hopkins University, Baltimore, MD, USA.
Déclais AC; Cancer Research UK Nucleic Acid Structure Research Group, School of Life Sciences, The University of Dundee, Dundee, UK.
Jin H; Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea.
Gwon GH; Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea.
Freeman ADJ; Cancer Research UK Nucleic Acid Structure Research Group, School of Life Sciences, The University of Dundee, Dundee, UK.
Cho Y; Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea.
Lilley DMJ; Cancer Research UK Nucleic Acid Structure Research Group, School of Life Sciences, The University of Dundee, Dundee, UK.
Ha T; Department of Physics and Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign, Champaign, IL, USA. .; Department of Biophysics and Biophysical Chemistry, Johns Hopkins University, Baltimore, MD, USA. .; Howard Hughes Medical Institute, Baltimore, MD, USA. .; Department of Biophysics, Johns Hopkins University, Baltimore, MD, USA. .; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA. .
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Źródło :
Nature chemical biology [Nat Chem Biol] 2019 Mar; Vol. 15 (3), pp. 269-275. Date of Electronic Publication: 2019 Jan 21.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
DNA, Cruciform/*metabolism
DNA, Cruciform/*physiology
Holliday Junction Resolvases/*metabolism
Animals ; Arabidopsis Proteins ; Chromosome Segregation/genetics ; DNA Repair/physiology ; DNA-Binding Proteins/physiology ; Deoxyribonuclease I ; Endodeoxyribonucleases ; Endonucleases ; Escherichia coli Proteins ; Fluorescence Resonance Energy Transfer/methods ; Holliday Junction Resolvases/physiology ; Humans ; Protein Binding ; Recombination, Genetic/genetics ; Single Molecule Imaging/methods ; Substrate Specificity
Czasopismo naukowe
Tytuł :
A monovalent ion in the DNA binding interface of the eukaryotic junction-resolving enzyme GEN1.
Autorzy :
Liu Y; Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee, Dow Street, Dundee DD1 5EH, UK.
Freeman AD; Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee, Dow Street, Dundee DD1 5EH, UK.
Déclais AC; Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee, Dow Street, Dundee DD1 5EH, UK.
Lilley DMJ; Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee, Dow Street, Dundee DD1 5EH, UK.
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Źródło :
Nucleic acids research [Nucleic Acids Res] 2018 Nov 16; Vol. 46 (20), pp. 11089-11098.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Protein Interaction Domains and Motifs*/genetics
Chaetomium/*enzymology
DNA, Fungal/*metabolism
Holliday Junction Resolvases/*chemistry
Holliday Junction Resolvases/*metabolism
Catalytic Domain/genetics ; Chaetomium/genetics ; Chaetomium/metabolism ; Cloning, Molecular ; Crystallography, X-Ray ; DNA Cleavage ; DNA, Cruciform/metabolism ; Escherichia coli ; Holliday Junction Resolvases/genetics ; Ions/chemistry ; Protein Binding ; Substrate Specificity/genetics
Czasopismo naukowe
Tytuł :
GEN1 Endonuclease: Purification and Nuclease Assays.
Autorzy :
Chan YW; The Francis Crick Institute, London, United Kingdom.
West SC; The Francis Crick Institute, London, United Kingdom. Electronic address: .
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Źródło :
Methods in enzymology [Methods Enzymol] 2018; Vol. 600, pp. 527-542. Date of Electronic Publication: 2018 Jan 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Recombinational DNA Repair*
DNA, Cruciform/*chemistry
Enzyme Assays/*methods
Holliday Junction Resolvases/*isolation & purification
Enzyme Assays/instrumentation ; Holliday Junction Resolvases/chemistry ; Isotope Labeling/instrumentation ; Isotope Labeling/methods ; Phosphorus Radioisotopes/chemistry ; Plasmids/chemistry ; Recombinant Proteins/chemistry ; Recombinant Proteins/isolation & purification
Czasopismo naukowe
Tytuł :
Preparation and Resolution of Holliday Junction DNA Recombination Intermediates.
Autorzy :
Shah Punatar R; The Francis Crick Institute, London, United Kingdom.
West SC; The Francis Crick Institute, London, United Kingdom. Electronic address: .
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Źródło :
Methods in enzymology [Methods Enzymol] 2018; Vol. 600, pp. 569-590. Date of Electronic Publication: 2018 Jan 09.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Recombinational DNA Repair*
DNA, Cruciform/*chemistry
DNA, Single-Stranded/*chemistry
Endodeoxyribonucleases/*chemistry
Escherichia coli Proteins/*chemistry
Holliday Junction Resolvases/*chemistry
DNA, Single-Stranded/isolation & purification ; Endodeoxyribonucleases/isolation & purification ; Escherichia coli Proteins/isolation & purification ; Holliday Junction Resolvases/isolation & purification ; Isotope Labeling/instrumentation ; Isotope Labeling/methods ; Phosphorus Radioisotopes/chemistry
Czasopismo naukowe
Tytuł :
Disruption of Gen1 Causes Congenital Anomalies of the Kidney and Urinary Tract in Mice.
Autorzy :
Wang H; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.; Neuro-Oncology Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.
Zhang C; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.; Department of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO 80309, USA.
Wang X; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.; Wuhan Children's Hospital (Wuhan Maternal and Child Healthcare Hospital), Tongji Medical College, Huazhong University of Science & Technology, Wuhan 430000, China.
Lian Y; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; MOE Key Laboratory of Contemporary Anthropology, Fudan University, Shanghai 200433, China.
Guo B; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.
Han M; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; MOE Key Laboratory of Contemporary Anthropology, Fudan University, Shanghai 200433, China.
Zhang X; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Zhu X; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.
Xu S; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.
Guo Z; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.
Bi Y; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Shen Q; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Wang X; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Liu J; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Zhuang Y; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; Department of Immunology, Duke University Medical Center, Durham, NC 27710, USA.
Ni T; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; MOE Key Laboratory of Contemporary Anthropology, Fudan University, Shanghai 200433, China.
Xu H; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
Wu X; State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.; Shanghai Kidney Development and Pediatric Kidney Disease Research Center, Children's Hospital of Fudan University, Shanghai 201102, China.
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Źródło :
International journal of biological sciences [Int J Biol Sci] 2018 Jan 01; Vol. 14 (1), pp. 10-20. Date of Electronic Publication: 2018 Jan 01 (Print Publication: 2018).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Holliday Junction Resolvases/*metabolism
Kidney/*abnormalities
Kidney/*metabolism
Urinary Tract/*abnormalities
Urinary Tract/*metabolism
Animals ; HEK293 Cells ; Holliday Junction Resolvases/genetics ; Homeodomain Proteins/genetics ; Homeodomain Proteins/metabolism ; Humans ; Immunoprecipitation ; In Situ Hybridization ; Intracellular Signaling Peptides and Proteins/genetics ; Intracellular Signaling Peptides and Proteins/metabolism ; Mice ; Mutation ; Nuclear Proteins/genetics ; Nuclear Proteins/metabolism ; Polymerase Chain Reaction ; Protein Binding ; Protein Tyrosine Phosphatases/genetics ; Protein Tyrosine Phosphatases/metabolism
Czasopismo naukowe
Tytuł :
Biochemical and Structural Properties of Fungal Holliday Junction-Resolving Enzymes.
Autorzy :
Liu Y; Cancer Research UK Nucleic Acid Structure Research Group, The University of Dundee, Dundee, United Kingdom.
Freeman A; Cancer Research UK Nucleic Acid Structure Research Group, The University of Dundee, Dundee, United Kingdom.
Déclais AC; Cancer Research UK Nucleic Acid Structure Research Group, The University of Dundee, Dundee, United Kingdom.
Gartner A; Cancer Research UK Nucleic Acid Structure Research Group, The University of Dundee, Dundee, United Kingdom.
Lilley DMJ; Cancer Research UK Nucleic Acid Structure Research Group, The University of Dundee, Dundee, United Kingdom. Electronic address: .
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Źródło :
Methods in enzymology [Methods Enzymol] 2018; Vol. 600, pp. 543-568. Date of Electronic Publication: 2018 Feb 01.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Chaetomium/*genetics
DNA, Cruciform/*chemistry
Enzyme Assays/*methods
Fungal Proteins/*chemistry
Holliday Junction Resolvases/*chemistry
Chaetomium/metabolism ; Crystallography, X-Ray/instrumentation ; Crystallography, X-Ray/methods ; Enzyme Assays/instrumentation ; Fungal Proteins/isolation & purification ; Holliday Junction Resolvases/isolation & purification ; Models, Molecular ; Protein Binding ; Protein Multimerization ; Protein Structure, Quaternary ; Recombinant Proteins/chemistry ; Recombinant Proteins/isolation & purification
Czasopismo naukowe

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