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Wyszukujesz frazę ""INDEL Mutation"" wg kryterium: Temat


Tytuł :
Investigation of INDEL variants in apoptosis: the relevance to gastric cancer.
Autorzy :
Cavalcante GC; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil.
de Moraes MR; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil.
Valente CMD; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil.
Silva CS; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil.
Modesto AAC; Núcleo de Pesquisas em Oncologia, Programa de Pós-Graduação em Oncologia e Ciências Médicas, Universidade Federal do Pará, Belém, Pará, 66073-005, Brazil.
de Assumpção PB; Núcleo de Pesquisas em Oncologia, Programa de Pós-Graduação em Oncologia e Ciências Médicas, Universidade Federal do Pará, Belém, Pará, 66073-005, Brazil.
de Assumpção PP; Núcleo de Pesquisas em Oncologia, Programa de Pós-Graduação em Oncologia e Ciências Médicas, Universidade Federal do Pará, Belém, Pará, 66073-005, Brazil.
Santos S; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil.; Núcleo de Pesquisas em Oncologia, Programa de Pós-Graduação em Oncologia e Ciências Médicas, Universidade Federal do Pará, Belém, Pará, 66073-005, Brazil.
Ribeiro-Dos-Santos Â; Laboratório de Genética Humana e Médica, Programa de Pós-Graduação em Genética e Biologia Molecular, Universidade Federal do Pará, Av. Augusto Correa 01, Belém, Pará, 66075-110, Brazil. .; Núcleo de Pesquisas em Oncologia, Programa de Pós-Graduação em Oncologia e Ciências Médicas, Universidade Federal do Pará, Belém, Pará, 66073-005, Brazil. .
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Źródło :
BMC medical genetics [BMC Med Genet] 2020 Oct 19; Vol. 21 (1), pp. 207. Date of Electronic Publication: 2020 Oct 19.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
INDEL Mutation*
Polymorphism, Single Nucleotide*
Apoptosis/*genetics
Genetic Predisposition to Disease/*genetics
Stomach Neoplasms/*genetics
Biomarkers, Tumor/genetics ; Caspase 3/genetics ; Caspase 8/genetics ; Caspase 9/genetics ; Fas-Associated Death Domain Protein/genetics ; Genotype ; Proto-Oncogene Proteins c-bcl-2/genetics ; Stomach Neoplasms/diagnosis ; Tumor Suppressor Protein p53/genetics ; fas Receptor/genetics
Czasopismo naukowe
Tytuł :
CRISPR-induced indels and base editing using the Staphylococcus aureus Cas9 in potato.
Autorzy :
Veillet F; IGEPP, INRAE, Institut Agro, Univ Rennes, Ploudaniel, France.; Germicopa Breeding, Chateauneuf Du Faou, France.
Kermarrec MP; IGEPP, INRAE, Institut Agro, Univ Rennes, Ploudaniel, France.
Chauvin L; IGEPP, INRAE, Institut Agro, Univ Rennes, Ploudaniel, France.
Chauvin JE; IGEPP, INRAE, Institut Agro, Univ Rennes, Ploudaniel, France.
Nogué F; Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, Versailles, France.
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Źródło :
PloS one [PLoS One] 2020 Aug 17; Vol. 15 (8), pp. e0235942. Date of Electronic Publication: 2020 Aug 17 (Print Publication: 2020).
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
Clustered Regularly Interspaced Short Palindromic Repeats*
INDEL Mutation*
CRISPR-Associated Protein 9/*genetics
Solanum tuberosum/*genetics
Staphylococcus aureus/*enzymology
CRISPR-Cas Systems ; Frameshift Mutation ; Gene Editing/methods ; Genome, Plant ; Plasmids/genetics ; Staphylococcus aureus/genetics
Czasopismo naukowe
Tytuł :
HEDGES error-correcting code for DNA storage corrects indels and allows sequence constraints.
Autorzy :
Press WH; Department of Computer Science, The University of Texas at Austin, Austin, TX 78712; .; Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712.
Hawkins JA; Oden Institute of Computational Engineering and Sciences, The University of Texas at Austin, Austin, TX 78712.; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.
Jones SK Jr; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.
Schaub JM; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.
Finkelstein IJ; Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX 78712.; Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712.
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Źródło :
Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2020 Aug 04; Vol. 117 (31), pp. 18489-18496. Date of Electronic Publication: 2020 Jul 16.
Typ publikacji :
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
INDEL Mutation*
DNA/*genetics
DNA Replication ; Information Storage and Retrieval ; Models, Statistical
Czasopismo naukowe
Tytuł :
A 51 bp indel polymorphism within the PTH1R gene is significantly associated with chicken growth and carcass traits.
Autorzy :
Ren T; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Zhang Z; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Fu R; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Yang Y; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.
Li W; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Liang J; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Mo G; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Luo W; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
Zhang X; Department of Animal Genetics, Breeding and Reproduction, College of Animal Science, South China Agricultural University, Guangzhou, 510642, Guangdong, China.; Guangdong Provincial Key Laboratory of Agro-Animal Genomics and Molecular Breeding, Key Laboratory of Chicken Genetics, Breeding and Reproduction, Ministry of Agriculture, Guangzhou, 510642, Guangdong, China.
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Źródło :
Animal genetics [Anim Genet] 2020 Aug; Vol. 51 (4), pp. 568-578. Date of Electronic Publication: 2020 May 13.
Typ publikacji :
Journal Article
MeSH Terms :
INDEL Mutation*
Polymorphism, Genetic*
Avian Proteins/*genetics
Chickens/*physiology
Receptor, Parathyroid Hormone, Type 1/*genetics
Animals ; Avian Proteins/metabolism ; Chickens/genetics ; Chickens/growth & development ; Female ; Meat/analysis ; Receptor, Parathyroid Hormone, Type 1/metabolism
Czasopismo naukowe
Tytuł :
Genomic characterization of classical swine fever virus LOM variants with 3'-UTR INDELs from pigs on Jeju Island, South Korea.
Autorzy :
Jang G; Animal Virology Laboratory, BK21 Plus KNU Creative BioResearch Group, School of Life Sciences, College of Natural Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
Kim JA; Animal Health Division, Jeju Special Self-Governing Province, Jeju, 63122, South Korea.
Yoo H; Farm and Pharm Veterinary Hospital, Jeju, 63029, Republic of Korea.
Yang K; Farm and Pharm Veterinary Hospital, Jeju, 63029, Republic of Korea.
Yang HS; Veterinary Research Institute, Jeju Special Self-Governing Province, Jeju, 63344, South Korea.
Park C; Veterinary Research Institute, Jeju Special Self-Governing Province, Jeju, 63344, South Korea.
Jeong K; Veterinary Research Institute, Jeju Special Self-Governing Province, Jeju, 63344, South Korea.
Park CK; College of Veterinary Medicine, Kyungpook National University, Daegu, 41566, South Korea.
Lyoo YS; College of Veterinary Medicine, Konkuk University, Seoul, 05029, South Korea.
Lee C; Animal Virology Laboratory, BK21 Plus KNU Creative BioResearch Group, School of Life Sciences, College of Natural Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea. .
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Źródło :
Archives of virology [Arch Virol] 2020 Jul; Vol. 165 (7), pp. 1691-1696. Date of Electronic Publication: 2020 May 11.
Typ publikacji :
Journal Article
MeSH Terms :
3' Untranslated Regions*
INDEL Mutation*
Classical Swine Fever/*virology
Classical Swine Fever Virus/*genetics
Animals ; Classical Swine Fever Virus/classification ; Classical Swine Fever Virus/isolation & purification ; Genome, Viral ; Genomics ; Islands ; Phylogeny ; Swine
Czasopismo naukowe
Tytuł :
Association of growth traits with a structural variation downstream of the KCNJ11 gene: a large population-based study in chickens.
Autorzy :
Wang X; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Wei C; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Zhang Z; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Liu D; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Guo Y; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Sun G; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Wang Y; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Li H; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Tian Y; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Kang X; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Han R; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
Li Z; Department of Animal Breeding and Genetics, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.; Henan Innovative Engineering Research Center of Poultry Germplasm Resource, No.15 Longzihu University Area, Zhengdong New District, College of Animal Science and Veterinary Medicine, Henan Agricultural University , Zhengzhou, China.
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Źródło :
British poultry science [Br Poult Sci] 2020 Jun; Vol. 61 (3), pp. 320-327. Date of Electronic Publication: 2020 Feb 14.
Typ publikacji :
Journal Article
MeSH Terms :
Chickens*
INDEL Mutation*
Animals ; Genotype ; Phenotype ; Polymorphism, Genetic
Czasopismo naukowe
Tytuł :
dv-trio: a family-based variant calling pipeline using DeepVariant.
Autorzy :
Ip EKK; Victor Chang Cardiac Research Institute, Sydney, Australia.; St. Vincent's Clinical School, UNSW Sydney, Sydney, Australia.
Hadinata C; Victor Chang Cardiac Research Institute, Sydney, Australia.
Ho JWK; Victor Chang Cardiac Research Institute, Sydney, Australia.; St. Vincent's Clinical School, UNSW Sydney, Sydney, Australia.; School of Biomedical Sciences, The University of Hong Kong, Hong Kong, China.
Giannoulatou E; Victor Chang Cardiac Research Institute, Sydney, Australia.; St. Vincent's Clinical School, UNSW Sydney, Sydney, Australia.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Jun 01; Vol. 36 (11), pp. 3549-3551.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
High-Throughput Nucleotide Sequencing*
INDEL Mutation*
Child ; Humans ; Mutation ; Neural Networks, Computer ; Software
Czasopismo naukowe
Tytuł :
Lean and deep models for more accurate filtering of SNP and INDEL variant calls.
Autorzy :
Friedman S; Data Sciences Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Gauthier L; Data Sciences Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Farjoun Y; Data Sciences Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Banks E; Data Sciences Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
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Źródło :
Bioinformatics (Oxford, England) [Bioinformatics] 2020 Apr 01; Vol. 36 (7), pp. 2060-2067.
Typ publikacji :
Journal Article
MeSH Terms :
Genomics*
INDEL Mutation*
Bayes Theorem ; High-Throughput Nucleotide Sequencing ; Neural Networks, Computer ; Sequence Analysis
Czasopismo naukowe
Tytuł :
Insertions and Deletions Play an Important Role in the Diversity of Conotoxins.
Autorzy :
Yang M; Department of Hepatobiliary and Pancreatic Surgery, NHC Key Laboratory of Nanobiological Technology, Xiangya Hospital, Central South University, 87 Xiangya Road, Changsha, 410008, Hunan, People's Republic of China.
Zhou M; Department of Oncology, Laboratory of Structural Biology, NHC Key Laboratory of Cancer Proteomics, Xiangya Hospital, Central South University, Changsha, 410008, Hunan, People's Republic of China. .
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Źródło :
The protein journal [Protein J] 2020 Apr; Vol. 39 (2), pp. 190-195.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
INDEL Mutation*
Conotoxins/*chemistry
Conus Snail/*genetics
Amino Acid Sequence ; Animals ; Conus Snail/chemistry
Czasopismo naukowe
Tytuł :
A novel splice site indel alteration in the EIF2AK3 gene is responsible for the first cases of Wolcott-Rallison syndrome in Hungary.
Autorzy :
Sümegi A; HAS-UD Vascular Biology and Myocardial Pathophysiology Research Group, Hungarian Academy of Sciences, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Hendrik Z; Department of Pathology, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Gáll T; HAS-UD Vascular Biology and Myocardial Pathophysiology Research Group, Hungarian Academy of Sciences, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Felszeghy E; Department of Pediatrics, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Szakszon K; Department of Pediatrics, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Antal-Szalmás P; Department of Laboratory Medicine, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Beke L; Department of Pathology, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Papp Á; Department of Pediatrics, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Méhes G; Department of Pathology, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Balla J; HAS-UD Vascular Biology and Myocardial Pathophysiology Research Group, Hungarian Academy of Sciences, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.; Division of Nephrology, Department of Internal Medicine, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary.
Balla G; HAS-UD Vascular Biology and Myocardial Pathophysiology Research Group, Hungarian Academy of Sciences, 98, Nagyerdei krt, Debrecen, H-4032, Hungary. .; Department of Pediatrics, Faculty of Medicine, University of Debrecen, 98, Nagyerdei krt, Debrecen, H-4032, Hungary. .
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Źródło :
BMC medical genetics [BMC Med Genet] 2020 Mar 27; Vol. 21 (1), pp. 61. Date of Electronic Publication: 2020 Mar 27.
Typ publikacji :
Case Reports; Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
INDEL Mutation*
Diabetes Mellitus, Type 1/*genetics
Epiphyses/*abnormalities
Osteochondrodysplasias/*genetics
RNA Splice Sites/*genetics
eIF-2 Kinase/*genetics
Child, Preschool ; Consanguinity ; Diabetes Mellitus, Type 1/diagnosis ; Diabetes Mellitus, Type 1/pathology ; Endoplasmic Reticulum Stress/genetics ; Epiphyses/pathology ; Fatal Outcome ; Female ; Frameshift Mutation ; Humans ; Hungary ; Infant ; Liver Failure/complications ; Liver Failure/genetics ; Liver Failure/pathology ; Osteochondrodysplasias/diagnosis ; Osteochondrodysplasias/pathology ; Pedigree ; Siblings ; Virus Diseases/complications ; Virus Diseases/pathology
SCR Disease Name :
Wolcott-Rallison syndrome
Czasopismo naukowe
Tytuł :
Accurate detection of mosaic variants in sequencing data without matched controls.
Autorzy :
Dou Y; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Kwon M; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Rodin RE; Division of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.; Departments of Neurology and Pediatrics, Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.; Harvard/MIT MD-PhD Program, Harvard Medical School, Boston, MA, USA.
Cortés-Ciriano I; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.
Doan R; Division of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.; Departments of Neurology and Pediatrics, Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Luquette LJ; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; Bioinformatics and Integrative Genomics PhD program, Harvard Medical School, Boston, MA, USA.
Galor A; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Bohrson C; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.; Bioinformatics and Integrative Genomics PhD program, Harvard Medical School, Boston, MA, USA.
Walsh CA; Division of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.; Departments of Neurology and Pediatrics, Harvard Medical School, Boston, MA, USA.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Park PJ; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. .; Ludwig Center at Harvard, Boston, MA, USA. .
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Źródło :
Nature biotechnology [Nat Biotechnol] 2020 Mar; Vol. 38 (3), pp. 314-319. Date of Electronic Publication: 2020 Jan 06.
Typ publikacji :
Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms :
INDEL Mutation*
Polymorphism, Single Nucleotide*
Single-Cell Analysis/*methods
Whole Genome Sequencing/*methods
Brain Chemistry ; Germ-Line Mutation ; Humans ; Machine Learning ; Mosaicism ; Software
Raport
Tytuł :
Population genetic data of 30 insertion-deletion markers in Punjabi population of Pakistan.
Autorzy :
Shahzad M; Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan. .
Hussain M; Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Shafique M; Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Perveen R; Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
Sheikh N; Centre for Applied Molecular Biology, University of the Punjab, Lahore, 53700, Pakistan.
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Źródło :
International journal of legal medicine [Int J Legal Med] 2020 Mar; Vol. 134 (2), pp. 511-512. Date of Electronic Publication: 2019 Feb 28.
Typ publikacji :
Journal Article
MeSH Terms :
Genetics, Population*
INDEL Mutation*
Ethnic Groups/*genetics
Genetic Loci ; Genetic Markers ; Humans ; Pakistan/ethnology ; Polymerase Chain Reaction
Czasopismo naukowe
Tytuł :
[Development and application of chloroplast molecular markers in Panax notoginseng].
Autorzy :
Sun JL; Kunming University of Science and Technology Faculty of Life Science and Technology Kunming 650500, China.
Han Y; Kunming University of Science and Technology Faculty of Life Science and Technology Kunming 650500, China.
Cui XM; Kunming University of Science and Technology Faculty of Life Science and Technology Kunming 650500, China Yunnan Provincial Key Laboratory of Panax notoginseng Kunming 650500, China Key Laboratory of Panax notoginseng Resources Sustainable Development and Utilization of State Administration of Traditional Chinese Medicine Kunming 650500, China Kunming Key Laboratory of Sustainable Development and Utilization of Famous-Region Drug Kunming 650500, China.
Liu Y; Kunming University of Science and Technology Faculty of Life Science and Technology Kunming 650500, China Yunnan Provincial Key Laboratory of Panax notoginseng Kunming 650500, China Key Laboratory of Panax notoginseng Resources Sustainable Development and Utilization of State Administration of Traditional Chinese Medicine Kunming 650500, China Kunming Key Laboratory of Sustainable Development and Utilization of Famous-Region Drug Kunming 650500, China.
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Źródło :
Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica [Zhongguo Zhong Yao Za Zhi] 2020 Mar; Vol. 45 (6), pp. 1342-1349.
Typ publikacji :
Journal Article
MeSH Terms :
INDEL Mutation*
Polymorphism, Single Nucleotide*
DNA, Chloroplast/*genetics
Panax notoginseng/*genetics
Genetic Markers ; Genetics, Population ; Sequence Alignment
Czasopismo naukowe
Tytuł :
InDels within caprine IGF2BP1 intron 2 and the 3'-untranslated regions are associated with goat growth traits.
Autorzy :
Wang Z; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Zhang X; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Jiang E; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Yan H; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.; College of Life Sciences, Yulin College, Yulin, Shaanxi, 719000, China.; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin College, Yulin, Shaanxi, 719000, China.
Zhu H; College of Life Sciences, Yulin College, Yulin, Shaanxi, 719000, China.; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin College, Yulin, Shaanxi, 719000, China.
Chen H; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Liu J; College of Life Sciences, Yulin College, Yulin, Shaanxi, 719000, China.; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin College, Yulin, Shaanxi, 719000, China.
Qu L; College of Life Sciences, Yulin College, Yulin, Shaanxi, 719000, China.; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin College, Yulin, Shaanxi, 719000, China.
Pan C; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
Lan X; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
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Źródło :
Animal genetics [Anim Genet] 2020 Feb; Vol. 51 (1), pp. 117-121. Date of Electronic Publication: 2019 Oct 17.
Typ publikacji :
Journal Article
MeSH Terms :
3' Untranslated Regions*
INDEL Mutation*
Introns*
Goats/*genetics
RNA-Binding Proteins/*genetics
Animals ; Body Weight ; Breeding ; Female ; Genotype ; Goats/growth & development
Czasopismo naukowe
Tytuł :
Ancestry informative DIP loci for dissecting genetic structure and ancestry proportions of Qinghai Tibetan and Tibet Tibetan groups.
Autorzy :
Jin XY; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Shen CM; Institute of Brain and Behavioral Sciences, College of Life Sciences, Shaanxi Normal University, Xi'an, China.
Chen C; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Guo YX; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Cui W; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Wang YJ; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Zhang WQ; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Kong TT; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Zhu BF; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China. .; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China. .; Department of Forensic Genetics, School of Forensic Medicine, Southern Medical University, Guangzhou, China. .
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Źródło :
Molecular biology reports [Mol Biol Rep] 2020 Feb; Vol. 47 (2), pp. 1079-1087. Date of Electronic Publication: 2019 Dec 02.
Typ publikacji :
Journal Article
MeSH Terms :
Genetic Loci*
Genetics, Population*
INDEL Mutation*
Polymorphism, Genetic*
Asian Continental Ancestry Group/*genetics
Ethnic Groups/*genetics
Alleles ; China ; Gene Frequency ; Geography ; Humans ; Linkage Disequilibrium ; Tibet
Czasopismo naukowe
Tytuł :
Development and utilization of an InDel marker linked to the fertility restorer genes of CMS-D8 and CMS-D2 in cotton.
Autorzy :
Feng J; Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou, 450000, Henan, China.; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Zhu H; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Zhang M; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Zhang X; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Guo L; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Qi T; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Tang H; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Wang H; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Qiao X; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Zhang B; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Shahzad K; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Xing C; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China. .
Wu J; Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou, 450000, Henan, China. .; State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000, Henan, China. .
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Źródło :
Molecular biology reports [Mol Biol Rep] 2020 Feb; Vol. 47 (2), pp. 1275-1282. Date of Electronic Publication: 2020 Jan 01.
Typ publikacji :
Journal Article
MeSH Terms :
Genes, Plant*
Genetic Markers*
INDEL Mutation*
Gossypium/*genetics
Plant Infertility/*genetics
Chromosome Mapping ; Crosses, Genetic ; Genetic Loci ; Reproducibility of Results ; Sequence Analysis, DNA
Czasopismo naukowe
Tytuł :
Indel locations are determined by template polarity in highly efficient in vivo CRISPR/Cas9-mediated HDR in Atlantic salmon.
Autorzy :
Straume AH; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Kjærner-Semb E; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Ove Skaftnesmo K; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Güralp H; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Kleppe L; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Wargelius A; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway.
Edvardsen RB; Institute of Marine Research, P.O. Box 1870, Nordnes, NO-5817, Bergen, Norway. .
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Źródło :
Scientific reports [Sci Rep] 2020 Jan 15; Vol. 10 (1), pp. 409. Date of Electronic Publication: 2020 Jan 15.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms :
CRISPR-Cas Systems*
DNA Breaks, Double-Stranded*
INDEL Mutation*
Recombinational DNA Repair*
Fish Proteins/*metabolism
Membrane Transport Proteins/*metabolism
Salmo salar/*genetics
Animals ; Embryo, Mammalian/cytology ; Embryo, Mammalian/metabolism ; Fish Proteins/antagonists & inhibitors ; Fish Proteins/genetics ; Gene Editing ; Membrane Transport Proteins/chemistry ; Membrane Transport Proteins/genetics ; Salmo salar/embryology
Czasopismo naukowe
Tytuł :
Genetic Polymorphisms and Forensic Efficiencies of a Set of Novel Autosomal InDel Markers in a Chinese Mongolian Group.
Autorzy :
Zhang W; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Jin X; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Wang Y; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Kong T; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.
Cui W; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Chen C; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Guo Y; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; College of Forensic Medicine, Xi'an Jiaotong University Health Science Center, Xi'an, China.
Zhu B; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Clinical Research Center of Shaanxi Province for Dental and Maxillofacial Diseases, College of Stomatology, Xi'an Jiaotong University, Xi'an, China.; Department of Forensic Genetics, School of Forensic Medicine, Southern Medical University, Guangzhou, China.
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Źródło :
BioMed research international [Biomed Res Int] 2020 Jan 08; Vol. 2020, pp. 3925189. Date of Electronic Publication: 2020 Jan 08 (Print Publication: 2020).
Typ publikacji :
Clinical Trial; Journal Article
MeSH Terms :
Asian Continental Ancestry Group*/ethnology
Asian Continental Ancestry Group*/genetics
INDEL Mutation*
Polymorphism, Genetic*
China/ethnology ; Female ; Genetic Markers ; Humans ; Male ; Multiplex Polymerase Chain Reaction
Czasopismo naukowe
Tytuł :
Development of SNVs and indels markers mined out of the first multi-organ transcriptomes from Hypancistrus zebra (Loricariidae), an endangered Amazonian catfish.
Autorzy :
Magalhães MGP; Laboratório de Genética Molecular de Microrganismos, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil; Laboratório de Toxicologia Ambiental, Escola Nacional de Saúde Pública (ENSP), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil. Electronic address: .
Moreira DA; Laboratório de Genética Molecular de Microrganismos, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil; Laboratório de Toxicologia Ambiental, Escola Nacional de Saúde Pública (ENSP), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil. Electronic address: .
Furtado C; Unidade de Genômica, Instituto Nacional do Câncer (INCA), Rio de Janeiro, Brazil. Electronic address: .
Parente TE; Laboratório de Genética Molecular de Microrganismos, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil; Laboratório de Toxicologia Ambiental, Escola Nacional de Saúde Pública (ENSP), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil. Electronic address: .
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Źródło :
Genomics [Genomics] 2020 Jan; Vol. 112 (1), pp. 971-980. Date of Electronic Publication: 2019 Jun 18.
Typ publikacji :
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms :
Genetic Variation*
INDEL Mutation*
Catfishes/*genetics
Animals ; Catfishes/metabolism ; Endangered Species ; Gene Expression Profiling ; Genetic Markers ; High-Throughput Nucleotide Sequencing ; Rivers ; Transcriptome
Czasopismo naukowe
Tytuł :
An indel polymorphism in the 3' untranslated region of HMGB1 confers risk for hepatocellular carcinoma by regulating HMGB1 transcriptional activity in a Chinese population.
Autorzy :
Wang J; Department of Medical Oncology, The Fifth People's Hospital of Changshu, Changshu, China.
Zhu J; Department of Gastroenterology, JingJiang People's Hospital, Jingjiang, China.
Mao DH; Department of General Surgery, The Fifth People's Hospital of Changshu, Changshu, China.
Zhu S; Department of Gastroenterology, The Fifth People's Hospital of Changshu, Changshu, China.
Mi XG; Department of General Internal Medicine, The Fifth People's Hospital of Changshu, Changshu, China.
Yu Q; Department of Gastroenterology, Suzhou Municipal Hospital, The Affiliated Suzhou Hospital of Nanjing Medical University, Nanjing Medical University, Suzhou, China.
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Źródło :
Neoplasma [Neoplasma] 2020 Jan; Vol. 67 (1), pp. 61-67. Date of Electronic Publication: 2019 Nov 26.
Typ publikacji :
Journal Article
MeSH Terms :
3' Untranslated Regions*
INDEL Mutation*
Carcinoma, Hepatocellular/*genetics
HMGB1 Protein/*genetics
Liver Neoplasms/*genetics
Asian Continental Ancestry Group ; Case-Control Studies ; China ; Genetic Predisposition to Disease ; Genotype ; Humans
Czasopismo naukowe

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