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Tytuł:
Joint application of A-InDels and miniSTRs for forensic personal, full and half sibling identifications, and genetic differentiation analyses in two populations from China.
Autorzy:
Cai M; Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong, China.
Lei F; Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong, China.
Liu Y; Laboratory of Fundamental Nursing Research, School of Nursing, Guangdong Medical University, Dongguan, Guangdong, China.
Wang X; Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong, China.
Wang H; Key Laboratory of Shaanxi Province for Craniofacial Precision Medicine Research, College of Stomatology, Xi'an Jiaotong University, Xi'an, Shanxi, China.
Xie W; School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong, China.
Yang Z; School of Business, Macau University of Science and Technology, Macao, China.
Yang S; The people's hospital of Hezhou, Guangxi, China. .
Zhu B; Guangzhou Key Laboratory of Forensic Multi-Omics for Precision Identification, School of Forensic Medicine, Southern Medical University, Guangzhou, Guangdong, China. .
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Źródło:
BMC genomics [BMC Genomics] 2024 Apr 02; Vol. 25 (1), pp. 329. Date of Electronic Publication: 2024 Apr 02.
Typ publikacji:
Journal Article
MeSH Terms:
Siblings*
Genetics, Population*
Humans ; Phylogeny ; China ; INDEL Mutation ; Microsatellite Repeats ; Forensic Genetics/methods ; Gene Frequency
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Systematic Comparison of Computational Tools for Sanger Sequencing-Based Genome Editing Analysis.
Autorzy:
Aoki K; School of Engineering Science, Kochi University of Technology, Kami 782-8502, Japan.
Yamasaki M; School of Engineering Science, Kochi University of Technology, Kami 782-8502, Japan.
Umezono R; School of Engineering Science, Kochi University of Technology, Kami 782-8502, Japan.
Hamamoto T; School of Engineering Science, Kochi University of Technology, Kami 782-8502, Japan.
Kamachi Y; School of Engineering Science, Kochi University of Technology, Kami 782-8502, Japan.
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Źródło:
Cells [Cells] 2024 Jan 30; Vol. 13 (3). Date of Electronic Publication: 2024 Jan 30.
Typ publikacji:
Journal Article
MeSH Terms:
Gene Editing*/methods
CRISPR-Cas Systems*/genetics
INDEL Mutation/genetics ; Genome/genetics ; Genomics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Illumina reads correction: evaluation and improvements.
Autorzy:
Długosz M; Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Poland.
Deorowicz S; Faculty of Automatic Control, Electronics and Computer Science, Silesian University of Technology, 44-100, Gliwice, Poland. .
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Źródło:
Scientific reports [Sci Rep] 2024 Jan 26; Vol. 14 (1), pp. 2232. Date of Electronic Publication: 2024 Jan 26.
Typ publikacji:
Journal Article
MeSH Terms:
Algorithms*
High-Throughput Nucleotide Sequencing*/methods
Humans ; Aged ; Sequence Analysis, DNA/methods ; INDEL Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Polymorphism within the GATA binding protein 4 gene is significantly associated with goat litter size.
Autorzy:
Wang Z; College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Wang X; College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Lan X; College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Zhu H; Life Science Research Center, Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin University, Yulin, China.
Qu L; Life Science Research Center, Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin University, Yulin, China.
Pan C; College of Animal Science and Technology, Northwest A&F University, Yangling, China.
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Źródło:
Animal biotechnology [Anim Biotechnol] 2023 Dec; Vol. 34 (9), pp. 4291-4300. Date of Electronic Publication: 2022 Nov 24.
Typ publikacji:
Journal Article
MeSH Terms:
Goats*/genetics
Polymorphism, Genetic*/genetics
Humans ; Pregnancy ; Male ; Female ; Animals ; Sheep ; Litter Size/genetics ; Genotype ; INDEL Mutation/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Investigation on mRNA expression and genetic variation within goat SMAD2 gene and its association with litter size.
Autorzy:
Wijayanti D; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.; Department of Animal Science, Perjuangan University of Tasikmalaya, Tasikmalaya, West Java, Indonesia.
Zhang S; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Bai Y; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Pan C; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Chen H; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Qu L; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin University, Yulin, Shaanxi, PR China; Life Science Research Center, Yulin University, Yulin, Shaanxi, PR China.
Guo Z; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.; Institute of Animal Husbandry and Veterinary Science of Bijie City, Guizhou, China.
Lan X; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
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Źródło:
Animal biotechnology [Anim Biotechnol] 2023 Dec; Vol. 34 (7), pp. 2111-2119. Date of Electronic Publication: 2022 May 18.
Typ publikacji:
Journal Article
MeSH Terms:
Goats*/genetics
Reproduction*/genetics
Pregnancy ; Female ; Animals ; Sheep/genetics ; Litter Size/genetics ; Genotype ; INDEL Mutation ; RNA, Messenger/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Insertion/deletion (Indel) variant of the goat RORA gene is associated with growth traits.
Autorzy:
Zhou Q; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Hu H; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Yang Y; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Kang Y; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Lan X; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
Wu X; Institute of Animal Husbandry and Veterinary, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China.
Guo Z; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.; Animal Husbandry and Veterinary Science Institute of Bijie city, Bijie, Guizhou, China.
Pan C; College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.
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Źródło:
Animal biotechnology [Anim Biotechnol] 2023 Dec; Vol. 34 (7), pp. 2175-2182. Date of Electronic Publication: 2022 May 27.
Typ publikacji:
Journal Article
MeSH Terms:
Goats*/physiology
INDEL Mutation*/genetics
Pregnancy ; Female ; Animals ; Litter Size/genetics ; Phenotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Goat CLSTN2 gene: tissue expression profile, genetic variation, and its associations with litter size.
Autorzy:
Wijayanti D; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.; Department of Animal Science, Perjuangan University of Tasikmalaya, Tasikmalaya, Indonesia.
Bai Y; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Hanif Q; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.; National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan.
Chen H; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
Zhu H; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin University, Yulin, Shaanxi, PR China and Life Science Research Center, Yulin University, Yulin, Shaanxi, PR China.
Qu L; Shaanxi Provincial Engineering and Technology Research Center of Cashmere Goats, Yulin University, Yulin, Shaanxi, PR China and Life Science Research Center, Yulin University, Yulin, Shaanxi, PR China.
Guo Z; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.; Institute of Animal Husbandry and Veterinary Science of Bijie City, Guizhou, China.
Lan X; Key Laboratory of Animal Genetics, Breeding and Reproduction of Shaanxi Province, College of Animal Science and Technology, Northwest A&F University, Yangling, China.
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Źródło:
Animal biotechnology [Anim Biotechnol] 2023 Dec; Vol. 34 (7), pp. 2674-2683. Date of Electronic Publication: 2022 Aug 18.
Typ publikacji:
Journal Article
MeSH Terms:
Goats*/genetics
INDEL Mutation*/genetics
Pregnancy ; Animals ; Female ; Sheep/genetics ; Litter Size/genetics ; Genotype ; RNA, Messenger
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Whole-genome resequencing and transcriptome analyses of four generation mutants to reveal spur-type and skin-color related genes in apple (Malus domestica Borkh. Cv. Red delicious).
Autorzy:
Ren J; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Li W; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Guo Z; Tianshui Normal University, Tianshui, 741001, PR China.
Ma Z; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Wan D; College of Ecology, Lanzhou University, Lanzhou, 730000, PR China.
Lu S; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Guo L; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Gou H; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China.
Chen B; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China. .
Mao J; College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, PR China. .
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Źródło:
BMC plant biology [BMC Plant Biol] 2023 Nov 30; Vol. 23 (1), pp. 607. Date of Electronic Publication: 2023 Nov 30.
Typ publikacji:
Journal Article
MeSH Terms:
Malus*/genetics
Malus*/metabolism
Fruit/genetics ; Genes, Plant ; INDEL Mutation ; Gene Expression Profiling ; Gene Expression Regulation, Plant
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
An upstream deletion polymorphism within the goat Period circadian regulator 1 ( PER1 ) gene was associated with growth traits.
Autorzy:
Zhang T; Key Laboratory of Animal Biotechnology, Ministry of Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, PR China.
Liu M; Key Laboratory of Animal Biotechnology, Ministry of Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, PR China.
Yang Y; Key Laboratory of Animal Biotechnology, Ministry of Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, PR China.
Wang K; Key Laboratory of Animal Biotechnology, Ministry of Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, PR China.
Zhao H; School of Life Sciences, Lanzhou University, Lanzhou, PR China.
Pan C; Key Laboratory of Animal Biotechnology, Ministry of Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, PR China.
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Źródło:
Animal biotechnology [Anim Biotechnol] 2023 Nov; Vol. 34 (4), pp. 819-824. Date of Electronic Publication: 2021 Nov 23.
Typ publikacji:
Journal Article
MeSH Terms:
Goats*/genetics
Polymorphism, Genetic*
Animals ; INDEL Mutation ; Phenotype ; Genotype
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Targeted large fragment deletion in plants using paired crRNAs with type I CRISPR system.
Autorzy:
Li Y; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Huang B; Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.; University of Chinese Academy of Sciences, Beijing, China.
Chen J; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Huang L; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Xu J; College of Biological Sciences, China Agricultural University, Beijing, China.
Wang Y; College of Biological Sciences, China Agricultural University, Beijing, China.
Cui G; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Zhao H; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Xin B; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Song W; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.
Zhu JK; Institute of Advanced Biotechnology and School of Life Sciences, Southern University of Science and Technology, Shenzhen, China.; Center for Advanced Bioindustry Technologies, Chinese Academy of Agricultural Sciences, Beijing, China.
Lai J; State Key Laboratory of Maize Bio-breeding, National Maize Improvement Center, Department of Plant Genetics and Breeding, China Agricultural University, Beijing, China.; Frontiers Science Center for Molecular Design Breeding, China Agricultural University, Beijing, China.; Center for Crop Functional Genomics and Molecular Breeding, China Agricultural University, Beijing, China.; Sanya Institute of China Agricultural University, Sanya, China.; Hainan Yazhou Bay Seed Laboratory, Sanya, China.
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Źródło:
Plant biotechnology journal [Plant Biotechnol J] 2023 Nov; Vol. 21 (11), pp. 2196-2208. Date of Electronic Publication: 2023 Aug 29.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Editing*
CRISPR-Cas Systems*/genetics
Plants/genetics ; Genome, Plant ; INDEL Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Validation of a Molecular Diagnostic Test for Circulating Tumor DNA by Next-Gen Sequencing.
Autorzy:
Fernandez SV; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Tan YF; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Rao S; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Fittipaldi P; Protocol Support Laboratory, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Sheriff F; Office of Clinical Research, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Borghaei H; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Dotan E; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Winn JS; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Edelman MJ; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Treat J; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Judd J; Department of Medical Oncology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Alpaugh RK; Protocol Support Laboratory, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Wang YL; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Yu JQ; Department of Radiology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Wasik M; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Baldwin DA; Department of Pathology, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 Oct 30; Vol. 24 (21). Date of Electronic Publication: 2023 Oct 30.
Typ publikacji:
Journal Article
MeSH Terms:
Circulating Tumor DNA*/genetics
Neoplasms*/diagnosis
Neoplasms*/genetics
Humans ; Pathology, Molecular ; INDEL Mutation ; Molecular Diagnostic Techniques ; High-Throughput Nucleotide Sequencing/methods ; Mutation ; Biomarkers, Tumor/genetics
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
VarSCAT: A computational tool for sequence context annotations of genomic variants.
Autorzy:
Wang N; Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.; InFLAMES Research Flagship Center, University of Turku, Turku, Finland.
Khan S; Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Elo LL; Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.; InFLAMES Research Flagship Center, University of Turku, Turku, Finland.; Institute of Biomedicine, University of Turku, Turku, Finland.
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Źródło:
PLoS computational biology [PLoS Comput Biol] 2023 Aug 11; Vol. 19 (8), pp. e1010727. Date of Electronic Publication: 2023 Aug 11 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
INDEL Mutation*/genetics
Genomics*/methods
Humans ; Software ; High-Throughput Nucleotide Sequencing
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Development of SNP and InDel markers by genome resequencing and transcriptome sequencing in radish (Raphanus sativus L.).
Autorzy:
Li Y; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Luo X; Guizhou Province Academy of Agricultural Sciences, Guizhou Institute of Biotechnology, Guiyang, 550003, China.
Peng X; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Jin Y; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Tan H; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Wu L; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Li J; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Pei Y; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Xu X; College of Agriculture, Guizhou University, Guiyang, 550003, China.; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China.
Zhang W; College of Agriculture, Guizhou University, Guiyang, 550003, China. .; Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550003, China. .
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Źródło:
BMC genomics [BMC Genomics] 2023 Aug 08; Vol. 24 (1), pp. 445. Date of Electronic Publication: 2023 Aug 08.
Typ publikacji:
Journal Article
MeSH Terms:
Raphanus*/genetics
Transcriptome ; Polymorphism, Single Nucleotide ; Phylogeny ; Sequence Analysis, DNA ; Genome, Plant ; INDEL Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
CRISPR prime editing for unconstrained correction of oncogenic KRAS variants.
Autorzy:
Jang G; Department of Cell and Genetic Engineering, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.; Stem Cell Immunomodulation Research Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Kweon J; Department of Cell and Genetic Engineering, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.
Kim Y; Department of Cell and Genetic Engineering, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea. .; Stem Cell Immunomodulation Research Center, University of Ulsan College of Medicine, Seoul, Republic of Korea. .
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Źródło:
Communications biology [Commun Biol] 2023 Jun 30; Vol. 6 (1), pp. 681. Date of Electronic Publication: 2023 Jun 30.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Clustered Regularly Interspaced Short Palindromic Repeats*
Proto-Oncogene Proteins p21(ras)*/genetics
Humans ; HEK293 Cells ; INDEL Mutation ; Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
ARPIP: Ancestral Sequence Reconstruction with Insertions and Deletions under the Poisson Indel Process.
Autorzy:
Jowkar G; Zurich University of Applied Sciences, School of Life Sciences and Facility Management, CH-8820 Wädenswil, Switzerland.; Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland.; University of Neuchâtel, Institute of Biology, CH-2000 Neuchâtel, Switzerland.
Pečerska J; Zurich University of Applied Sciences, School of Life Sciences and Facility Management, CH-8820 Wädenswil, Switzerland.; Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland.
Maiolo M; Zurich University of Applied Sciences, School of Life Sciences and Facility Management, CH-8820 Wädenswil, Switzerland.; Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland.; University of Bern, Institute of Pathology, CH-3008 Bern, Switzerland.
Gil M; Zurich University of Applied Sciences, School of Life Sciences and Facility Management, CH-8820 Wädenswil, Switzerland.; Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland.
Anisimova M; Zurich University of Applied Sciences, School of Life Sciences and Facility Management, CH-8820 Wädenswil, Switzerland.; Swiss Institute of Bioinformatics, CH-1015 Lausanne, Switzerland.
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Źródło:
Systematic biology [Syst Biol] 2023 Jun 16; Vol. 72 (2), pp. 307-318.
Typ publikacji:
Journal Article
MeSH Terms:
INDEL Mutation*/genetics
Algorithms*
Phylogeny ; Likelihood Functions ; Sequence Alignment ; Evolution, Molecular
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Indel driven rapid evolution of core nuclear pore protein gene promoters.
Autorzy:
McQuarrie DWJ; School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.; Birmingham Centre for Genome Biology, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Read AM; School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Stephens FHS; School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Civetta A; Department of Biology, University of Winnipeg, Winnipeg, MB, R3B 2E9, Canada. .
Soller M; School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK. .; Birmingham Centre for Genome Biology, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK. .
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Źródło:
Scientific reports [Sci Rep] 2023 May 17; Vol. 13 (1), pp. 8035. Date of Electronic Publication: 2023 May 17.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Nuclear Pore Complex Proteins*/genetics
Nuclear Pore Complex Proteins*/metabolism
Nuclear Pore*/genetics
Nuclear Pore*/metabolism
Animals ; Male ; Female ; Active Transport, Cell Nucleus/genetics ; Drosophila/genetics ; Drosophila/metabolism ; INDEL Mutation
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Structural Dynamics Predominantly Determine the Adaptability of Proteins to Amino Acid Deletions.
Autorzy:
Banerjee A; Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794, USA.
Bahar I; Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794, USA.; Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794, USA.
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Źródło:
International journal of molecular sciences [Int J Mol Sci] 2023 May 08; Vol. 24 (9). Date of Electronic Publication: 2023 May 08.
Typ publikacji:
Journal Article
MeSH Terms:
Amino Acids*/genetics
Proteins*/chemistry
INDEL Mutation ; Protein Engineering
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Comprehensive de novo mutation discovery with HiFi long-read sequencing.
Autorzy:
Kucuk E; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.; Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.
van der Sanden BPGH; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.; Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, The Netherlands.
O'Gorman L; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.
Kwint M; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.
Derks R; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.
Wenger AM; Pacific Biosciences, Menlo Park, CA, USA.
Lambert C; Pacific Biosciences, Menlo Park, CA, USA.
Chakraborty S; Pacific Biosciences, Menlo Park, CA, USA.
Baybayan P; Pacific Biosciences, Menlo Park, CA, USA.
Rowell WJ; Pacific Biosciences, Menlo Park, CA, USA.
Brunner HG; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.; Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, The Netherlands.; Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.; GROW School for Oncology and Developmental Biology, Maastricht University Medical Center, Maastricht, The Netherlands.
Vissers LELM; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands.; Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, The Netherlands.
Hoischen A; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands. .; Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands. .; Department of Internal Medicine, Radboud University Medical Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, the Netherlands. .
Gilissen C; Department of Human Genetics, Radboud University Medical Center, PO Box 9101, 6500 HB, Nijmegen, The Netherlands. .; Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands. .
Pokaż więcej
Źródło:
Genome medicine [Genome Med] 2023 May 08; Vol. 15 (1), pp. 34. Date of Electronic Publication: 2023 May 08.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
High-Throughput Nucleotide Sequencing*
INDEL Mutation*
Humans ; Alleles ; Microsatellite Repeats
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Tytuł:
Test development, optimization and validation of a WGS pipeline for genetic disorders.
Autorzy:
Yang Z; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Yang X; Department of Paediatrics, Pu'er People's Hospital, Pu'er, 665000, China.
Sun Y; BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Wang Y; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Song L; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; DTU Bioengineering, Technical University of Denmark, 2800, Kongens Lyngby, Denmark.
Qiao Z; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Fang Z; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Wang Z; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Liu L; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Chen Y; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Yan S; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Guo X; BGI-Wuhan Clinical Laboratories, BGI-Shenzhen, Wuhan, 430074, China.
Zhang J; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Fan C; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Liu F; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China.
Peng Z; BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Peng H; Clinical Laboratory of BGI Health, BGI-Shenzhen, Shenzhen, 518083, China.
Sun J; Tianjin Medical Laboratory, BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China. .; BGI-Tianjin, BGI-Shenzhen, Tianjin, 300308, China. .
Chen W; Pu'er People's Hospital, Pu'er, 665000, China. .
Pokaż więcej
Źródło:
BMC medical genomics [BMC Med Genomics] 2023 Apr 05; Vol. 16 (1), pp. 74. Date of Electronic Publication: 2023 Apr 05.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
INDEL Mutation*
Whole Genome Sequencing/methods ; Base Sequence
Czasopismo naukowe
Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
Wyświetlanie 1-20 z 1416

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