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Tytuł:
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network
Autorzy:
Grapotte, Mathys
Saraswat, Manu
Bessière, Chloé
Menichelli, Christophe
Ramilowski, Jordan A.
Severin, Jessica
Hayashizaki, Yoshihide
Itoh, Masayoshi
Tagami, Michihira
Murata, Mitsuyoshi
Kojima-ishiyama, Miki
Noma, Shohei
Noguchi, Shuhei
Kasukawa, Takeya
Hasegawa, Akira
Suzuki, Harukazu
Nishiyori-sueki, Hiromi
Frith, Martin
Abugessaisa, Imad
Aitken, Stuart
Aken, Bronwen L.
Alam, Intikhab
Alam, Tanvir
Alasiri, Rami
Alhendi, Ahmad M. N.
Alinejad-rokny, Hamid
Alvarez, Mariano J.
Andersson, Robin
Arakawa, Takahiro
Araki, Marito
Arbel, Taly
Archer, John
Archibald, Alan L.
Arner, Erik
Arner, Peter
Asai, Kiyoshi
Ashoor, Haitham
Astrom, Gaby
Babina, Magda
Baillie, J. Kenneth
Bajic, Vladimir B.
Bajpai, Archana
Baker, Sarah
Baldarelli, Richard M.
Balic, Adam
Bansal, Mukesh
Batagov, Arsen O.
Batzoglou, Serafim
Beckhouse, Anthony G.
Beltrami, Antonio P.
Beltrami, Carlo A.
Bertin, Nicolas
Bhattacharya, Sharmodeep
Bickel, Peter J.
Blake, Judith A.
Blanchette, Mathieu
Bodega, Beatrice
Bonetti, Alessandro
Bono, Hidemasa
Bornholdt, Jette
Bttcher, Michael
Bougouffa, Salim
Boyd, Mette
Breda, Jeremie
Brombacher, Frank
Brown, James B.
Bult, Carol J.
Burroughs, A. Maxwell
Burt, Dave W.
Busch, Annika
Caglio, Giulia
Califano, Andrea
Cameron, Christopher J.
Cannistraci, Carlo V.
Carbone, Alessandra
Carlisle, Ailsa J.
Carninci, Piero
Carter, Kim W.
Cesselli, Daniela
Chang, Jen-chien
Chen, Julie C.
Chen, Yun
Chierici, Marco
Christodoulou, John
Ciani, Yari
Clark, Emily L.
Coskun, Mehmet
Dalby, Maria
Dalla, Emiliano
Daub, Carsten O.
Davis, Carrie A.
De Hoon, Michiel J. L.
De Rie, Derek
Denisenko, Elena
Deplancke, Bart
Detmar, Michael
Deviatiiarov, Ruslan
Di Bernardo, Diego
Diehl, Alexander D.
Dieterich, Lothar C.
Dimont, Emmanuel
Djebali, Sarah
Dohi, Taeko
Dostie, Jose
Drablos, Finn
Edge, Albert S. B.
Edinger, Matthias
Ehrlund, Anna
Ekwall, Karl
Elofsson, Arne
Endoh, Mitsuhiro
Enomoto, Hideki
Enomoto, Saaya
Faghihi, Mohammad
Fagiolini, Michela
Farach-carson, Mary C.
Faulkner, Geoffrey J.
Favorov, Alexander
Fernandes, Ana Miguel
Ferrai, Carmelo
Forrest, Alistair R. R.
Forrester, Lesley M.
Forsberg, Mattias
Fort, Alexandre
Francescatto, Margherita
Freeman, Tom C.
Fukuda, Shinji
Funayama, Manabu
Furlanello, Cesare
Furuno, Masaaki
Furusawa, Chikara
Gao, Hui
Gazova, Iveta
Gebhard, Claudia
Geier, Florian
Geijtenbeek, Teunis B. H.
Ghosh, Samik
Ghosheh, Yanal
Gingeras, Thomas R.
Gojobori, Takashi
Goldberg, Tatyana
Goldowitz, Daniel
Gough, Julian
Greco, Dario
Gruber, Andreas J.
Guhl, Sven
Guigo, Roderic
Guler, Reto
Gusev, Oleg
Gustincich, Stefano
Ha, Thomas J.
Haberle, Vanja
Hale, Paul
Hallstrom, Bjrn M.
Hamada, Michiaki
Handoko, Lusy
Hara, Mitsuko
Harbers, Matthias
Harrow, Jennifer
Harshbarger, Jayson
Hase, Takeshi
Hashimoto, Kosuke
Hatano, Taku
Hattori, Nobutaka
Hayashi, Ryuhei
Herlyn, Meenhard
Hettne, Kristina
Heutink, Peter
Hide, Winston
Hitchens, Kelly J.
Sui, Shannon Ho
’t Hoen, Peter A. C.
Hon, Chung Chau
Hori, Fumi
Horie, Masafumi
Horimoto, Katsuhisa
Horton, Paul
Hou, Rui
Huang, Edward
Huang, Yi
Hugues, Richard
Hume, David
Ienasescu, Hans
Iida, Kei
Ikawa, Tomokatsu
Ikemura, Toshimichi
Ikeo, Kazuho
Inoue, Norihiko
Ishizu, Yuri
Ito, Yosuke
Ivshina, Anna V.
Jankovic, Boris R.
Jenjaroenpun, Piroon
Johnson, Rory
Jorgensen, Mette
Jorjani, Hadi
Joshi, Anagha
Jurman, Giuseppe
Kaczkowski, Bogumil
Kai, Chieko
Kaida, Kaoru
Kajiyama, Kazuhiro
Kaliyaperumal, Rajaram
Kaminuma, Eli
Kanaya, Takashi
Kaneda, Hiroshi
Kapranov, Philip
Kasianov, Artem S.
Katayama, Toshiaki
Kato, Sachi
Kawaguchi, Shuji
Kawai, Jun
Kawaji, Hideya
Kawamoto, Hiroshi
Kawamura, Yuki I.
Kawasaki, Satoshi
Kawashima, Tsugumi
Kempfle, Judith S.
Kenna, Tony J.
Kere, Juha
Khachigian, Levon
Kiryu, Hisanori
Kishima, Mami
Kitajima, Hiroyuki
Kitamura, Toshio
Kitano, Hiroaki
Klaric, Enio
Klepper, Kjetil
Klinken, S. Peter
Kloppmann, Edda
Knox, Alan J.
Kodama, Yuichi
Kogo, Yasushi
Kojima, Miki
Kojima, Soichi
Komatsu, Norio
Komiyama, Hiromitsu
Kono, Tsukasa
Koseki, Haruhiko
Koyasu, Shigeo
Kratz, Anton
Kukalev, Alexander
Kulakovskiy, Ivan
Kundaje, Anshul
Kunikata, Hiroshi
Kuo, Richard
Kuo, Tony
Kuraku, Shigehiro
Kuznetsov, Vladimir A.
Kwon, Tae Jun
Larouche, Matt
Lassmann, Timo
Law, Andy
Le-cao, Kim-anh
Lecellier, Charles-henri
Lee, Weonju
Lenhard, Boris
Lennartsson, Andreas
Li, Kang
Li, Ruohan
Lilje, Berit
Lipovich, Leonard
Lizio, Marina
Lopez, Gonzalo
Magi, Shigeyuki
Mak, Gloria K.
Makeev, Vsevolod
Manabe, Riichiro
Mandai, Michiko
Mar, Jessica
Maruyama, Kazuichi
Maruyama, Taeko
Mason, Elizabeth
Mathelier, Anthony
Matsuda, Hideo
Medvedeva, Yulia A.
Meehan, Terrence F.
Mejhert, Niklas
Meynert, Alison
Mikami, Norihisa
Minoda, Akiko
Miura, Hisashi
Miyagi, Yohei
Miyawaki, Atsushi
Mizuno, Yosuke
Morikawa, Hiromasa
Morimoto, Mitsuru
Morioka, Masaki
Morishita, Soji
Moro, Kazuyo
Motakis, Efthymios
Motohashi, Hozumi
Mukarram, Abdul Kadir
Mummery, Christine L.
Mungall, Christopher J.
Murakawa, Yasuhiro
Muramatsu, Masami
Nagasaka, Kazunori
Nagase, Takahide
Nakachi, Yutaka
Nakahara, Fumio
Nakai, Kenta
Nakamura, Kumi
Nakamura, Yasukazu
Nakamura, Yukio
Nakazawa, Toru
Nason, Guy P.
Nepal, Chirag
Nguyen, Quan Hoang
Nielsen, Lars K.
Nishida, Kohji
Nishiguchi, Koji M.
Nishiyori, Hiromi
Nitta, Kazuhiro
Notredame, Cedric
Ogishima, Soichi
Ohkura, Naganari
Ohno, Hiroshi
Ohshima, Mitsuhiro
Ohtsu, Takashi
Okada, Yukinori
Okada-hatakeyama, Mariko
Okazaki, Yasushi
Oksvold, Per
Orlando, Valerio
Ow, Ghim Sion
Ozturk, Mumin
Pachkov, Mikhail
Paparountas, Triantafyllos
Parihar, Suraj P.
Park, Sung-joon
Pascarella, Giovanni
Passier, Robert
Persson, Helena
Philippens, Ingrid H.
Piazza, Silvano
Plessy, Charles
Pombo, Ana
Ponten, Fredrik
Poulain, Stéphane
Poulsen, Thomas M.
Pradhan, Swati
Prezioso, Carolina
Pridans, Clare
Qin, Xiang-yang
Quackenbush, John
Rackham, Owen
Ramilowski, Jordan
Ravasi, Timothy
Rehli, Michael
Rennie, Sarah
Rito, Tiago
Rizzu, Patrizia
Robert, Christelle
Roos, Marco
Rost, Burkhard
Roudnicky, Filip
Roy, Riti
Rye, Morten B.
Sachenkova, Oxana
Saetrom, Pal
Sai, Hyonmi
Saiki, Shinji
Saito, Mitsue
Saito, Akira
Sakaguchi, Shimon
Sakai, Mizuho
Sakaue, Saori
Sakaue-sawano, Asako
Sandelin, Albin
Sano, Hiromi
Sasamoto, Yuzuru
Sato, Hiroki
Saxena, Alka
Saya, Hideyuki
Schafferhans, Andrea
Schmeier, Sebastian
Schmidl, Christian
Schmocker, Daniel
Schneider, Claudio
Schueler, Marcus
Schultes, Erik A.
Schulze-tanzil, Gundula
Semple, Colin A.
Seno, Shigeto
Seo, Wooseok
Sese, Jun
Sheng, Guojun
Shi, Jiantao
Shimoni, Yishai
Shin, Jay W.
Simonsanchez, Javier
Sivertsson, Asa
Sjostedt, Evelina
Soderhall, Cilla
Laurent, Georges St
Stoiber, Marcus H.
Sugiyama, Daisuke
Summers, Kim M.
Suzuki, Ana Maria
Suzuki, Kenji
Suzuki, Mikiko
Suzuki, Naoko
Suzuki, Takahiro
Swanson, Douglas J.
Swoboda, Rolf K.
Taguchi, Ayumi
Takahashi, Hazuki
Takahashi, Masayo
Takamochi, Kazuya
Takeda, Satoru
Takenaka, Yoichi
Tam, Kin Tung
Tanaka, Hiroshi
Tanaka, Rica
Tanaka, Yuji
Tang, Dave
Taniuchi, Ichiro
Tanzer, Andrea
Tarui, Hiroshi
Taylor, Martin S.
Terada, Aika
Terao, Yasuhisa
Testa, Alison C.
Thomas, Mark
Thongjuea, Supat
Tomii, Kentaro
Triglia, Elena Torlai
Toyoda, Hiroo
Tsang, H. Gwen
Tsujikawa, Motokazu
Uhlén, Mathias
Valen, Eivind
Van De Wetering, Marc
Van Nimwegen, Erik
Velmeshev, Dmitry
Verardo, Roberto
Vitezic, Morana
Vitting-seerup, Kristoffer
Von Feilitzen, Kalle
Voolstra, Christian R.
Vorontsov, Ilya E.
Wahlestedt, Claes
Wasserman, Wyeth W.
Watanabe, Kazuhide
Watanabe, Shoko
Wells, Christine A.
Winteringham, Louise N.
Wolvetang, Ernst
Yabukami, Haruka
Yagi, Ken
Yamada, Takuji
Yamaguchi, Yoko
Yamamoto, Masayuki
Yamamoto, Yasutomo
Yamamoto, Yumiko
Yamanaka, Yasunari
Yano, Kojiro
Yasuzawa, Kayoko
Yatsuka, Yukiko
Yo, Masahiro
Yokokura, Shunji
Yoneda, Misako
Yoshida, Emiko
Yoshida, Yuki
Yoshihara, Masahito
Young, Rachel
Young, Robert S.
Yu, Nancy Y.
Yumoto, Noriko
Zabierowski, Susan E.
Zhang, Peter G.
Zucchelli, Silvia
Zwahlen, Martin
Chatelain, Clément
Bréhélin, Laurent
Pokaż więcej
Temat:
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]
Article
Machine learning
Genomics
Transcriptomics
Science
Biology
Enhancer
Transcription (biology)
Cap analysis gene expression
Promoter
Sequence motif
Minion
Computational biology
Gene
Tandem repeat
General Physics and Astronomy
General Biochemistry, Genetics and Molecular Biology
General Chemistry
610 Medizin und Gesundheit
Cardiovascular and Metabolic Diseases
FANTOM consortium
Animals
Humans
Mice
Neurodegenerative Diseases
Computational Biology
Base Sequence
Microsatellite Repeats
Polymorphism
Genetic
Genome
Human
Transcription Initiation Site
Enhancer Elements
Promoter Regions
High-Throughput Nucleotide Sequencing
Transcription Initiation
A549 Cells
Deep Learning
Neural Networks
Computer
Clinical Research
Human Genome
Genetics
Generic health relevance
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
Chemistry(all)
Biochemistry, Genetics and Molecular Biology(all)
Physics and Astronomy(all)
Journal Article
Research Support, Non-U.S. Gov't
humanities
Źródło:
Nature Communications
Nature Communications, Nature Publishing Group, 2021, 12, pp.1-18. ⟨10.1038/s41467-021-23143-7⟩
Nature Communications, Vol 12, Iss 1, Pp 1-18 (2021)
Nature communications, vol 12, iss 1
Nature Communications, Nature Publishing Group, 2021, 12 (1), ⟨10.1038/s41467-021-23143-7⟩
Nature communications, 12(1):3297. Nature Publishing Group
Grapotte, M, Saraswat, M, Bessière, C, Menichelli, C, Ramilowski, J A, Severin, J, Hayashizaki, Y, Itoh, M, Tagami, M, Murata, M, Kojima-Ishiyama, M, Noma, S, Noguchi, S, Kasukawa, T, Hasegawa, A, Suzuki, H, Nishiyori-Sueki, H, Frith, M C, Abugessaisa, I, Aitken, S, Aken, B L, Alam, I, Alam, T, Alasiri, R, Alhendi, A M N, Alinejad-Rokny, H, Alvarez, M J, Andersson, R, Arakawa, T, Araki, M, Arbel, T, Bornholdt, J, Boyd, M, Chen, Y, Coskun, M, Dalby, M, Ienasescu, H, Jørgensen, M, Kaczkowski, B, Kere, J, Li, K, Lilje, B, Nepal, C, Nguyen, Q H, Nielsen, L K, Rennie, S, Sandelin, A, Valen, E, Vitezic, M, Vitting-Seerup, K & FANTOM Consortium 2021, ' Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network ', Nature Communications, vol. 12, 3297 . https://doi.org/10.1038/s41467-021-23143-7
Grapotte, M, Saraswat, M, Bessière, C, Menichelli, C, Ramilowski, J A, Severin, J, Hayashizaki, Y, Itoh, M, Tagami, M, Murata, M, Kojima-ishiyama, M, Noma, S, Noguchi, S, Kasukawa, T, Hasegawa, A, Suzuki, H, Nishiyori-sueki, H, Frith, M, Abugessaisa, I, Aitken, S, Aken, B L, Alam, I, Alam, T, Alasiri, R, Alhendi, A M N, Alinejad-rokny, H, Alvarez, M J, Andersson, R, Arakawa, T, Araki, M, Arbel, T, Archer, J, Archibald, A L, Arner, E, Arner, P, Asai, K, Ashoor, H, Astrom, G, Babina, M, Baillie, J K, Bajic, V B, Bajpai, A, Baker, S, Baldarelli, R M, Balic, A, Bansal, M, Batagov, A O, Batzoglou, S, Beckhouse, A G, Beltrami, A P, Beltrami, C A, Bertin, N, Bhattacharya, S, Bickel, P J, Blake, J A, Blanchette, M, Bodega, B, Bonetti, A, Bono, H, Bornholdt, J, Bttcher, M, Bougouffa, S, Boyd, M, Breda, J, Brombacher, F, Brown, J B, Bult, C J, Burroughs, A M, Burt, D W, Busch, A, Caglio, G, Califano, A, Cameron, C J, Cannistraci, C V, Carbone, A, Carlisle, A J, Carninci, P, Carter, K W, Cesselli, D, Chang, J, Chen, J C, Chen, Y, Chierici, M, Christodoulou, J, Ciani, Y, Clark, E L, Coskun, M, Dalby, M, Dalla, E, Daub, C O, Davis, C A, De Hoon, M J L, De Rie, D, Denisenko, E, Deplancke, B, Detmar, M, Deviatiiarov, R, Di Bernardo, D, Diehl, A D, Dieterich, L C, Dimont, E, Djebali, S, Dohi, T, Dostie, J, Drablos, F, Edge, A S B, Edinger, M, Ehrlund, A, Ekwall, K, Elofsson, A, Endoh, M, Enomoto, H, Enomoto, S, Faghihi, M, Fagiolini, M, Farach-carson, M C, Faulkner, G J, Favorov, A, Fernandes, A M, Ferrai, C, Forrest, A R R, Forrester, L M, Forsberg, M, Fort, A, Francescatto, M, Freeman, T C, Frith, M, Fukuda, S, Funayama, M, Furlanello, C, Furuno, M, Furusawa, C, Gao, H, Gazova, I, Gebhard, C, Geier, F, Geijtenbeek, T B H, Ghosh, S, Ghosheh, Y, Gingeras, T R, Gojobori, T, Goldberg, T, Goldowitz, D, Gough, J, Greco, D, Gruber, A J, Guhl, S, Guigo, R, Guler, R, Gusev, O, Gustincich, S, Ha, T J, Haberle, V, Hale, P, Hallstrom, B M, Hamada, M, Handoko, L, Hara, M, Harbers, M, Harrow, J, Harshbarger, J, Hase, T, Hasegawa, A, Hashimoto, K, Hatano, T, Hattori, N, Hayashi, R, Hayashizaki, Y, Herlyn, M, Hettne, K, Heutink, P, Hide, W, Hitchens, K J, Sui, S H, ’t Hoen, P A C, Hon, C C, Hori, F, Horie, M, Horimoto, K, Horton, P, Hou, R, Huang, E, Huang, Y, Hugues, R, Hume, D, Ienasescu, H, Iida, K, Ikawa, T, Ikemura, T, Ikeo, K, Inoue, N, Ishizu, Y, Ito, Y, Itoh, M, Ivshina, A V, Jankovic, B R, Jenjaroenpun, P, Johnson, R, Jorgensen, M, Jorjani, H, Joshi, A, Jurman, G, Kaczkowski, B, Kai, C, Kaida, K, Kajiyama, K, Kaliyaperumal, R, Kaminuma, E, Kanaya, T, Kaneda, H, Kapranov, P, Kasianov, A S, Kasukawa, T, Katayama, T, Kato, S, Kawaguchi, S, Kawai, J, Kawaji, H, Kawamoto, H, Kawamura, Y I, Kawasaki, S, Kawashima, T, Kempfle, J S, Kenna, T J, Kere, J, Khachigian, L, Kiryu, H, Kishima, M, Kitajima, H, Kitamura, T, Kitano, H, Klaric, E, Klepper, K, Klinken, S P, Kloppmann, E, Knox, A J, Kodama, Y, Kogo, Y, Kojima, M, Kojima, S, Komatsu, N, Komiyama, H, Kono, T, Koseki, H, Koyasu, S, Kratz, A, Kukalev, A, Kulakovskiy, I, Kundaje, A, Kunikata, H, Kuo, R, Kuo, T, Kuraku, S, Kuznetsov, V A, Kwon, T J, Larouche, M, Lassmann, T, Law, A, Le-cao, K, Lecellier, C, Lee, W, Lenhard, B, Lennartsson, A, Li, K, Li, R, Lilje, B, Lipovich, L, Lizio, M, Lopez, G, Magi, S, Mak, G K, Makeev, V, Manabe, R, Mandai, M, Mar, J, Maruyama, K, Maruyama, T, Mason, E, Mathelier, A, Matsuda, H, Medvedeva, Y A, Meehan, T F, Mejhert, N, Meynert, A, Mikami, N, Minoda, A, Miura, H, Miyagi, Y, Miyawaki, A, Mizuno, Y, Morikawa, H, Morimoto, M, Morioka, M, Morishita, S, Moro, K, Motakis, E, Motohashi, H, Mukarram, A K, Mummery, C L, Mungall, C J, Murakawa, Y, Muramatsu, M, Murata, M, Nagasaka, K, Nagase, T, Nakachi, Y, Nakahara, F, Nakai, K, Nakamura, K, Nakamura, Y, Nakamura, Y, Nakazawa, T, Nason, G P, Nepal, C, Nguyen, Q H, Nielsen, L K, Nishida, K, Nishiguchi, K M, Nishiyori, H, Nitta, K, Noguchi, S, Noma, S, Notredame, C, Ogishima, S, Ohkura, N, Ohno, H, Ohshima, M, Ohtsu, T, Okada, Y, Okada-hatakeyama, M, Okazaki, Y, Oksvold, P, Orlando, V, Ow, G S, Ozturk, M, Pachkov, M, Paparountas, T, Parihar, S P, Park, S, Pascarella, G, Passier, R, Persson, H, Philippens, I H, Piazza, S, Plessy, C, Pombo, A, Ponten, F, Poulain, S, Poulsen, T M, Pradhan, S, Prezioso, C, Pridans, C, Qin, X, Quackenbush, J, Rackham, O, Ramilowski, J, Ravasi, T, Rehli, M, Rennie, S, Rito, T, Rizzu, P, Robert, C, Roos, M, Rost, B, Roudnicky, F, Roy, R, Rye, M B, Sachenkova, O, Saetrom, P, Sai, H, Saiki, S, Saito, M, Saito, A, Sakaguchi, S, Sakai, M, Sakaue, S, Sakaue-sawano, A, Sandelin, A, Sano, H, Sasamoto, Y, Sato, H, Saxena, A, Saya, H, Schafferhans, A, Schmeier, S, Schmidl, C, Schmocker, D, Schneider, C, Schueler, M, Schultes, E A, Schulze-tanzil, G, Semple, C A, Seno, S, Seo, W, Sese, J, Severin, J, Sheng, G, Shi, J, Shimoni, Y, Shin, J W, Simonsanchez, J, Sivertsson, A, Sjostedt, E, Soderhall, C, Laurent, G S, Stoiber, M H, Sugiyama, D, Summers, K M, Suzuki, A M, Suzuki, H, Suzuki, K, Suzuki, M, Suzuki, N, Suzuki, T, Swanson, D J, Swoboda, R K, Tagami, M, Taguchi, A, Takahashi, H, Takahashi, M, Takamochi, K, Takeda, S, Takenaka, Y, Tam, K T, Tanaka, H, Tanaka, R, Tanaka, Y, Tang, D, Taniuchi, I, Tanzer, A, Tarui, H, Taylor, M S, Terada, A, Terao, Y, Testa, A C, Thomas, M, Thongjuea, S, Tomii, K, Triglia, E T, Toyoda, H, Tsang, H G, Tsujikawa, M, Uhlén, M, Valen, E, Van De Wetering, M, Van Nimwegen, E, Velmeshev, D, Verardo, R, Vitezic, M, Vitting-seerup, K, Von Feilitzen, K, Voolstra, C R, Vorontsov, I E, Wahlestedt, C, Wasserman, W W, Watanabe, K, Watanabe, S, Wells, C A, Winteringham, L N, Wolvetang, E, Yabukami, H, Yagi, K, Yamada, T, Yamaguchi, Y, Yamamoto, M, Yamamoto, Y, Yamamoto, Y, Yamanaka, Y, Yano, K, Yasuzawa, K, Yatsuka, Y, Yo, M, Yokokura, S, Yoneda, M, Yoshida, E, Yoshida, Y, Yoshihara, M, Young, R, Young, R S, Yu, N Y, Yumoto, N, Zabierowski, S E, Zhang, P G, Zucchelli, S, Zwahlen, M, Chatelain, C, Carninci, P, De Hoon, M J L, Wasserman, W W, Bréhélin, L & Lecellier, C 2021, ' Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network ', Nature Communications, vol. 12, no. 1 . https://doi.org/10.1038/s41467-021-23143-7
Nature Communications, 12 (1)
Opis pliku:
application/pdf; application/application/pdf
Dostępność:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::071cc9b35fa8ab5830f24ee8cb404eaf
https://hal.inrae.fr/hal-03255754
Tytuł:
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
Autorzy:
FANTOM Consortium
Arner, Erik
Daub, Carsten O.
Vitting-Seerup, Kristoffer
Andersson, Robin
Lilje, Berit
Drabløs, Finn
Lennartsson, Andreas
Rönnerblad, Michelle
Hrydziuszko, Olga
Vitezic, Morana
Freeman, Tom C.
Alhendi, Ahmad M. N.
Arner, Peter
Axton, Richard
Baillie, J. Kenneth
Beckhouse, Anthony
Bodega, Beatrice
Briggs, James
Brombacher, Frank
Davis, Margaret
Detmar, Michael
Ehrlund, Anna
Endoh, Mitsuhiro
Eslami, Afsaneh
Fagiolini, Michela
Fairbairn, Lynsey
Faulkner, Geoffrey J.
Ferrai, Carmelo
Fisher, Malcolm E.
Forrester, Lesley
Goldowitz, Daniel
Guler, Reto
Ha, Thomas
Hara, Mitsuko
Herlyn, Meenhard
Ikawa, Tomokatsu
Kai, Chieko
Kawamoto, Hiroshi
Khachigian, Levon M.
Klinken, S. Peter
Kojima, Soichi
Koseki, Haruhiko
Klein, Sarah
Mejhert, Niklas
Miyaguchi, Ken
Mizuno, Yosuke
Morimoto, Mitsuru
Morris, Kelly J.
Mummery, Christine
Nakachi, Yutaka
Ogishima, Soichi
Okada-Hatakeyama, Mariko
Okazaki, Yasushi
Orlando, Valerio
Ovchinnikov, Dmitry
Passier, Robert
Patrikakis, Margaret
Pombo, Ana
Qin, Xian-Yang
Roy, Sugata
Sato, Hiroki
Savvi, Suzana
Saxena, Alka
Schwegmann, Anita
Sugiyama, Daisuke
Swoboda, Rolf
Tanaka, Hiroshi
Tomoiu, Andru
Winteringham, Louise N.
Wolvetang, Ernst
Yanagi-Mizuochi, Chiyo
Yoneda, Misako
Zabierowski, Susan
Zhang, Peter
Abugessaisa, Imad
Bertin, Nicolas
Diehl, Alexander D.
Fukuda, Shiro
Furuno, Masaaki
Harshbarger, Jayson
Hasegawa, Akira
Hori, Fumi
Ishikawa-Kato, Sachi
Ishizu, Yuri
Itoh, Masayoshi
Kawashima, Tsugumi
Kojima, Miki
Kondo, Naoto
Lizio, Marina
Meehan, Terrence F.
Mungall, Christopher J.
Murata, Mitsuyoshi
Nishiyori-Sueki, Hiromi
Sahin, Serkan
Nagao-Sato, Sayaka
Severin, Jessica
de Hoon, Michiel J. L.
Kawai, Jun
Kasukawa, Takeya
Lassmann, Timo
Suzuki, Harukazu
Kawaji, Hideya
Summers, Kim M.
Wells, Christine
Hume, David A.
Forrest, Alistair R. R.
Sandelin, Albin
Carninci, Piero
Hayashizaki, Yoshihide
Pokaż więcej
Źródło:
Science. 347(6225):1010-1014
Dostęp URL:
http://www.jstor.org/stable/24746227  Link otwiera się w nowym oknie
Czasopismo naukowe
Tytuł:
Functional annotation of human long noncoding RNAs via molecular phenotyping
Autorzy:
Ramilowski, Jordan A.
Yip, Chi Wai
Agrawal, Saumya
Chang, Jen-Chien
Ciani, Yari
Kulakovskiy, Ivan V.
Mendez, Mickaël
Ooi, Jasmine Li Ching
Ouyang, John F.
Parkinson, Nicholas J.
Petri, Andreas
Roos, Leonie
Severin, Jessica
Yasuzawa, Kayoko
Abugessaisa, Imad
Akalin, Altuna
Antonov, Ivan V.
Arner, Erik
Bonetti, Alessandro
Bono, Hidemasa
Borsari, Beatrice
Brombacher, Frank
Cameron, Christopher J.F.
Cannistraci, Carlo V.
Cardenas, Ryan
Cardon, Melissa
Chang, Howard
Dostie, Josée
Ducoli, Luca
Favorov, Alexander V.
Fort, Alexandre
Garrido, Diego
Gil, Noa
Gimenez, Juliette
Guler, Reto
Handoko, Lusy
Harshbarger, Jayson
Hasegawa, Akira
Hasegawa, Yuki
Hashimoto, Kosuke
Hayatsu, Norihito
Heutink, Peter
Hirose, Tetsuro
Imada, Eddie L.
Itoh, Masayoshi
Kaczkowski, Bogumil
Kanhere, Aditi S.
Kawabata, Emily
Kawaji, Hideya
Kawashima, Tsugumi
Kelly, S. Thomas
Kojima, Miki
Kondo, Naoto
Koseki, Haruhiko
Kouno, Tsukasa
Kratz, Anton
Kurowska-Stolarska, Mariola S.
Kwon, Andrew Tae Jun
Leek, Jeffrey T.
Lennartsson, Andreas
Lizio, Marina
López-Redondo, Fernando
Luginbühl, Joachim
Maeda, Shiori
Makeev, Vsevolod
Marchionni, Luigi
Medvedeva, Yulia A.
Minoda, Aki
Müller, Ferenc
Muñoz-Aguirre, Manuel
Murata, Mitsuyoshi
Nishiyori, Hiromi
Nitta, Kazuhiro R.
Noguchi, Shuhei
Noro, Yukihiko
Nurtdinov, Ramil N.
Okazaki, Yasushi
Orlando, Valerio
Paquette, Denis
Parr, Callum J.C.
Rackham, Owen J.L.
Rizzu, Patrizia
Sánchez Martinez, Diego Fernando
Sandelin, Albin
Sanjana, Pillay
Semple, Colin A.M.
Shibayama, Youtaro
Sivaraman, Divya M.
Szumowski, Suzannah C.
Tagami, Michihira
Taylor, Martin S.
Terao, Chikashi
Thodberg, Malte
Thongjuea, Supat
Tripathi, Vidisha
Ulitsky, Igor
Verardo, Roberto
Vorontsov, Ilya E.
Yamamoto, Chinatsu
Baillie, J. Kenneth
Forrest, Alistair R.R.
Guigó, Roderic
Hoffman, Michael
Hon, Chungchau
Kasukawa, Takeya
Kauppinen, Sakari
Kere, Jura
Lenhard, Boris
Schneider, Claudio
Suzuki, Harukazu
Yagi, Ken
De Hoon, Michiel J.L.
Shin, Jay W.
Carninci, Piero
Pokaż więcej
Źródło:
Genome Research, 30 (7)
Opis pliku:
application/application/pdf
Dostępność:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d5a1f97f79581c06928dffa7f9fe536
Tytuł:
Functional Annotation of Human Long Non-Coding RNAs via Molecular Phenotyping
Autorzy:
Ramilowski, Jordan
Yip, Chi Wai
Agrawal, Saumya
Chang, Jen-Chien
Ciani, Yari
Kulakovskiy, Ivan V
Mendez, Mickael
Ooi, Jasmine Li Ching
Ouyang, John F
Parkinson, Nick
Petri, Andreas
Roos, Leonie
Severin, Jessica
Yasuzawa, Kayoko
Abugessaisa, Imad
Akalin, Altuna
Antonov, Ivan
Arner, Erik
Bonetti, Alessandro
Bono, Hidemasa
Borsari, Beatrice
Brombacher, Frank
Cannistraci, Carlo Vittorio
Cardenas, Ryan
Cardon, Melissa
Chang, Howard
Dostie, Josée
Ducoli, Luca
Favorov, Alexander
Fort, Alexandre
Garrido, Diego
Gil, Noa
Gimenez, Juliette
Guler, Reto
Handoko, Lusy
Harshbarger, Jayson
Hasegawa, Akira
Hasegawa, Yuki
Hashimoto, Kosuke
Hayatsu, Norihito
Heutink, Peter
Hirose, Tetsuro
Imada, Eddie L
Itoh, Masayoshi
Kaczkowski, Bogumil
Kanhere, Aditi
Kawabata, Emily
Kawaji, Hideya
Kawashima, Tsugumi
Kelly, Tom
Kojima, Miki
Kondo, Naoto
Koseki, Haruhiko
Kouno, Tsukasa
Kratz, Anton
Kurowska-Stolarska, Mariola
Kwon, Andrew Tae Jun
Leek, Jeffrey
Lennartsson, Andreas
Lizio, Marina
Lopez, Fernando
Luginbühl, Joachim
Maeda, Shiori
Makeev, Vsevolod
Marchionni, Luigi
Medvedeva, Yulia A
Minoda, Aki
Müller, Ferenc
Aguirre, Manuel Munoz
Murata, Mitsuyoshi
Nishiyori, Hiromi
Nitta, Kazuhiro
Noguchi, Shuhei
Noro, Yukihiko
Nurtdinov, Ramil
Okazaki, Yasushi
Orlando, Valerio
Paquette, Denis
Parr, Callum
Rackham, Owen JL
Rizzu, Patrizia
Sanchez, Diego Fernando
Sandelin, Albin
Sanjana, Pillay
Semple, Colin AM
Sharma, Harshita
Shibayama, Youtaro
Sivaraman, Divya
Suzuki, Takahiro
Szumowski, Suzannah
Tagami, Michihira
Taylor, Martin S
Terao, Chikashi
Thodberg, Malte
Thongjuea, Supat
Tripathi, Vidisha
Ulitsky, Igor
Verardo, Roberto
Vorontsov, Ilya
Yamamoto, Chinatsu
Young, Robert S
Baillie, J Kenneth
Forrest, Alistair RR
Guigó, Roderic
Hoffman, Michael M
Hon, Chung Chau
Kasukawa, Takeya
Kauppinen, Sakari
Kere, Juha
Lenhard, Boris
Schneider, Claudio
Suzuki, Harukazu
Yagi, Ken
de Hoon, Michiel
Shin, Jay W
Carninci, Piero
FANTOM consortium
Pokaż więcej
Temat:
Functional annotation
Biology
Biological pathway
Promoter activity
Computational biology
Transcriptome
Cell growth
Genome
Phenotype
Gene expression
Dostępność:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a46b53a4c59f5aa48e139d767d36993
Tytuł:
慢性期脳卒中後片麻痺患者に対する反復性低頻度経頭蓋磁気刺激と集中的リハビリテーションの併用療法の有効性を評価する指標の検討:JASMIDを用いた評価の妥当性について (原著)
Autorzy:
Haga, Yusuke
Yoshida, Yutaka
Kojima, Miki
Harashima, Hiroaki
Abo, Masahiro
Pokaż więcej
Temat:
JASMID
hemiparesis after stroke
LF-rTMS
rehabilitation
Źródło:
The Jikei University School of Medicine
Dostępność:
https://explore.openaire.eu/search/publication?articleId=jairo_______::9904ef0604fb30aaa4029511661fbab6
http://hdl.handle.net/10328/8943
Tytuł:
Data Descriptor : FANTOM5 CAGE profiles of human and mouse samples
Autorzy:
Noguchi, Shuhei
Arakawa, Takahiro
Fukuda, Shiro
Furuno, Masaaki
Hasegawa, Akira
Hori, Fumi
Ishikawa-Kato, Sachi
Kaida, Kaoru
Kaiho, Ai
Kanamori-Katayama, Mutsumi
Kawashima, Tsugumi
Kojima, Miki
Kubosaki, Atsutaka
Manabe, Ri-ichiroh
Murata, Mitsuyoshi
Nagao-Sato, Sayaka
Nakazato, Kenichi
Ninomiya, Noriko
Nishiyori-Sueki, Hiromi
Noma, Shohei
Saijyo, Eri
Saka, Akiko
Sakai, Mizuho
Simon, Christophe
Suzuki, Naoko
Tagami, Michihira
Watanabe, Shoko
Yoshida, Shigehiro
Arner, Peter
Axton, Richard A.
Babina, Magda
Baillie, J. Kenneth
Barnett, Timothy C.
Beckhouse, Anthony G.
Blumenthal, Antje
Bodega, Beatrice
Bonetti, Alessandro
Briggs, James
Brombacher, Frank
Carlisle, Ailsa J.
Clevers, Hans C.
Davis, Carrie A.
Detmar, Michael
Dohi, Taeko
Edge, Albert S. B.
Edinger, Matthias
Ehrlund, Anna
Ekwall, Karl
Endoh, Mitsuhiro
Enomoto, Hideki
Eslami, Afsaneh
Fagiolini, Michela
Fairbairn, Lynsey
Farach-Carson, Mary C.
Faulkner, Geoffrey J.
Ferrai, Carmelo
Fisher, Malcolm E.
Forrester, Lesley M.
Fujita, Rie
Furusawa, Jun-ichi
Geijtenbeek, Teunis B.
Gingeras, Thomas
Goldowitz, Daniel
Guhl, Sven
Guler, Reto
Gustincich, Stefano
Ha, Thomas J.
Hamaguchi, Masahide
Hara, Mitsuko
Hasegawa, Yuki
Herlyn, Meenhard
Heutink, Peter
Hitchens, Kelly J.
Hume, David A.
Ikawa, Tomokatsu
Ishizu, Yuri
Kai, Chieko
Kawamoto, Hiroshi
Kawamura, Yuki I.
Kempfle, Judith S.
Kenna, Tony J.
Kere, Juha
Khachigian, Levon M.
Kitamura, Toshio
Klein, Sarah
Klinken, S. Peter
Knox, Alan J.
Kojima, Soichi
Koseki, Haruhiko
Koyasu, Shigeo
Lee, Weonju
Lennartsson, Andreas
Mackay-sim, Alan
Mejhert, Niklas
Mizuno, Yosuke
Morikawa, Hiromasa
Morimoto, Mitsuru
Moro, Kazuyo
Morris, Kelly J.
Motohashi, Hozumi
Mummery, Christine L.
Nakachi, Yutaka
Nakahara, Fumio
Nakamura, Toshiyuki
Nakamura, Yukio
Nozaki, Tadasuke
Ogishima, Soichi
Ohkura, Naganari
Ohno, Hiroshi
Ohshima, Mitsuhiro
Okada-Hatakeyama, Mariko
Okazaki, Yasushi
Orlando, Valerio
Ovchinnikov, Dmitry A.
Passier, Robert
Patrikakis, Margaret
Pombo, Ana
Pradhan-Bhatt, Swati
Qin, Xian-Yang
Rehli, Michael
Rizzu, Patrizia
Roy, Sugata
Sajantila, Antti
Sakaguchi, Shimon
Sato, Hiroki
Satoh, Hironori
Savvi, Suzana
Saxena, Alka
Schmidl, Christian
Schneider, Claudio
Schulze-Tanzil, Gundula G.
Schwegmann, Anita
Sheng, Guojun
Shin, Jay W.
Sugiyama, Daisuke
Sugiyama, Takaaki
Summers, Kim M.
Takahashi, Naoko
Takai, Jun
Tanaka, Hiroshi
Tatsukawa, Hideki
Tomoiu, Andru
Toyoda, Hiroo
van de Wetering, Marc
van den Berg, Linda M.
Verardo, Roberto
Vijayan, Dipti
Wells, Christine A.
Winteringham, Louise N.
Wolvetang, Ernst
Yamaguchi, Yoko
Yamamoto, Masayuki
Yanagi-Mizuochi, Chiyo
Yoneda, Misako
Yonekura, Yohei
Zhang, Peter G.
Zucchelli, Silvia
Abugessaisa, Imad
Arner, Erik
Harshbarger, Jayson
Kondo, Atsushi
Lassmann, Timo
Lizio, Marina
Sahin, Serkan
Sengstag, Thierry
Severin, Jessica
Shimoji, Hisashi
Suzuki, Masanori
Suzuki, Harukazu
Kawai, Jun
Kondo, Naoto
Itoh, Masayoshi
Daub, Carsten O.
Kasukawa, Takeya
Kawaji, Hideya
Carninci, Piero
Forrest, Alistair R. R.
Hayashizaki, Yoshihide
Pokaż więcej
Temat:
UCSC GENOME BROWSER
MAMMALIAN-CELLS
GENE-EXPRESSION
IN-VITRO
TRANSCRIPTION
ATLAS
VISUALIZATION
ENHANCERS
UPDATE
GROWTH
3111 Biomedicine
Dostępność:
https://explore.openaire.eu/search/publication?articleId=od______1593::7cb515c24c3039e73360173f85dbfa3f
http://hdl.handle.net/10138/224407
Tytuł:
FANTOM5 CAGE profiles of human and mouse samples
Autorzy:
Noguchi, Shuhei
Arakawa, Takahiro
Fukuda, Shiro
Furuno, Masaaki
Hasegawa, Akira
Hori, Fumi
Ishikawa-Kato, Sachi
Kaida, Kaoru
Kaiho, Ai
Kanamori-Katayama, Mutsumi
Kawashima, Tsugumi
Kojima, Miki
Kubosaki, Atsutaka
Manabe, Ri-ichiroh
Murata, Mitsuyoshi
Nagao-Sato, Sayaka
Nakazato, Kenichi
Ninomiya, Noriko
Nishiyori-Sueki, Hiromi
Noma, Shohei
Saijyo, Eri
Saka, Akiko
Sakai, Mizuho
Simon, Christophe
Suzuki, Naoko
Tagami, Michihira
Watanabe, Shoko
Yoshida, Shigehiro
Arner, Peter
Axton, Richard A.
Babina, Magda
Baillie, J. Kenneth
Barnett, Timothy C.
Beckhouse, Anthony G.
Blumenthal, Antje
Bodega, Beatrice
Bonetti, Alessandro
Briggs, James
Brombacher, Frank
Carlisle, Ailsa J.
Clevers, Hans C.
Davis, Carrie A.
Detmar, Michael
Dohi, Taeko
Edge, Albert S.B.
Edinger, Matthias
Ehrlund, Anna
Ekwall, Karl
Endoh, Mitsuhiro
Enomoto, Hideki
Eslami, Afsaneh
Fagiolini, Michela
Fairbairn, Lynsey
Farach-Carson, Mary C.
Faulkner, Geoffrey J.
Ferrai, Carmelo
Fisher, Malcolm E.
Forrester, Lesley M.
Fujita, Rie
Furusawa, Jun-ichi
Geijtenbeek, Teunis B.
Gingeras, Thomas
Goldowitz, Daniel
Guhl, Sven
Guler, Reto
Gustincich, Stefano
Ha, Thomas J.
Hamaguchi, Masahide
Hara, Mitsuko
Hasegawa, Yuki
Herlyn, Meenhard
Heutink, Peter
Hitchens, Kelly J.
Hume, David A.
Ikawa, Tomokatsu
Ishizu, Yuri
Kai, Chieko
Kawamoto, Hiroshi
Kawamura, Yuki I.
Kempfle, Judith S.
Kenna, Tony J.
Kere, Juha
Khachigian, Levon M.
Kitamura, Toshio
Klein, Sarah
Klinken, S. Peter
Knox, Alan J.
Kojima, Soichi
Koseki, Haruhiko
Koyasu, Shigeo
Lee, Weonju
Lennartsson, Andreas
Mackay-sim, Alan
Mejhert, Niklas
Mizuno, Yosuke
Morikawa, Hiromasa
Morimoto, Mitsuru
Moro, Kazuyo
Morris, Kelly J.
Motohashi, Hozumi
Mummery, Christine L.
Nakachi, Yutaka
Nakahara, Fumio
Nakamura, Toshiyuki
Nakamura, Yukio
Nozaki, Tadasuke
Ogishima, Soichi
Ohkura, Naganari
Ohno, Hiroshi
Ohshima, Mitsuhiro
Okada-Hatakeyama, Mariko
Okazaki, Yasushi
Orlando, Valerio
Ovchinnikov, Dmitry A.
Passier, Robert
Patrikakis, Margaret
Pombo, Ana
Pradhan-Bhatt, Swati
Qin, Xian-Yang
Rehli, Michael
Rizzu, Patrizia
Roy, Sugata
Sajantila, Antti
Sakaguchi, Shimon
Sato, Hiroki
Satoh, Hironori
Savvi, Suzana
Saxena, Alka
Schmidl, Christian
Schneider, Claudio
Schulze-Tanzil, Gundula G.
Schwegmann, Anita
Sheng, Guojun
Shin, Jay W.
Sugiyama, Daisuke
Sugiyama, Takaaki
Summers, Kim M.
Takahashi, Naoko
Takai, Jun
Tanaka, Hiroshi
Tatsukawa, Hideki
Tomoiu, Andru
Toyoda, Hiroo
van de Wetering, Marc
van den Berg, Linda M.
Verardo, Roberto
Vijayan, Dipti
Wells, Christine A.
Winteringham, Louise N.
Wolvetang, Ernst
Yamaguchi, Yoko
Yamamoto, Masayuki
Yanagi-Mizuochi, Chiyo
Yoneda, Misako
Yonekura, Yohei
Zhang, Peter G.
Zucchelli, Silvia
Abugessaisa, Imad
Arner, Erik
Harshbarger, Jayson
Kondo, Atsushi
Lassmann, Timo
Lizio, Marina
Sahin, Serkan
Sengstag, Thierry
Severin, Jessica
Shimoji, Hisashi
Suzuki, Masanori
Suzuki, Harukazu
Kawai, Jun
Kondo, Naoto
Itoh, Masayoshi
Daub, Carsten O.
Kasukawa, Takeya
Kawaji, Hideya
Carninci, Piero
Forrest, Alistair R.R.
Hayashizaki, Yoshihide
Pokaż więcej
Temat:
Library and Information Sciences
Statistics, Probability and Uncertainty
Computer Science Applications
Education
Information Systems
Statistics and Probability
Animals
Gene Expression Regulation
Humans
Mice
Promoter Regions, Genetic
Species Specificity
Gene Expression Profiling
Genome
Settore BIO/11 - Biologia Molecolare
Journal Article
Transcription (biology)
Cap analysis gene expression
Regulation of gene expression
Promoter
Enhancer
Computational biology
Gene expression profiling
Biology
Molecular biology
Cell activation
Data Descriptor
Systems biology
Cell biology
Computational biology and bioinformatics
Developmental biology
Research Support
Non-U.S. Gov't
Research Support, Non-U.S. Gov't
Cardiovascular and Metabolic Diseases
Źródło:
Scientific Data, 4
Noguchi, S, Arakawa, T, Fukuda, S, Furuno, M, Hasegawa, A, Hori, F, Ishikawa-Kato, S, Kaida, K, Kaiho, A, Kanamori-Katayama, M, Kawashima, T, Kojima, M, Kubosaki, A, Manabe, R-I, Murata, M, Nagao-Sato, S, Nakazato, K, Ninomiya, N, Nishiyori-Sueki, H, Noma, S, Saijyo, E, Saka, A, Sakai, M, Simon, C, Suzuki, N, Tagami, M, Watanabe, S, Yoshida, S, Arner, P, Axton, R A, Babina, M, Baillie, J K, Barnett, T C, Beckhouse, A G, Blumenthal, A, Bodega, B, Bonetti, A, Briggs, J, Brombacher, F, Carlisle, A J, Clevers, H C, Davis, C A, Detmar, M, Dohi, T, Edge, A S B, Edinger, M, Ehrlund, A, Ekwall, K, Endoh, M, Enomoto, H, Eslami, A, Fagiolini, M, Fairbairn, L, Farach-Carson, M C, Faulkner, G J, Ferrai, C, Fisher, M E, Forrester, L M, Fujita, R, Furusawa, J-I, Geijtenbeek, T B, Gingeras, T, Goldowitz, D, Guhl, S, Guler, R, Gustincich, S, Ha, T J, Hamaguchi, M, Hara, M, Hasegawa, Y, Herlyn, M, Heutink, P, Hitchens, K J, Hume, D A, Ikawa, T, Ishizu, Y, Kai, C, Kawamoto, H, Kawamura, Y I, Kempfle, J S, Kenna, T J, Kere, J, Khachigian, L M, Kitamura, T, Klein, S, Klinken, S P, Knox, A J, Kojima, S, Koseki, H, Koyasu, S, Lee, W, Lennartsson, A, Mackay-Sim, A, Mejhert, N, Mizuno, Y, Morikawa, H, Morimoto, M, Moro, K, Morris, K J, Motohashi, H, Mummery, C L, Nakachi, Y, Nakahara, F, Nakamura, T, Nakamura, Y, Nozaki, T, Ogishima, S, Ohkura, N, Ohno, H, Ohshima, M, Okada-Hatakeyama, M, Okazaki, Y, Orlando, V, Ovchinnikov, D A, Passier, R, Patrikakis, M, Pombo, A, Pradhan-Bhatt, S, Qin, X-Y, Rehli, M, Rizzu, P, Roy, S, Sajantila, A, Sakaguchi, S, Sato, H, Satoh, H, Savvi, S, Saxena, A, Schmidl, C, Schneider, C, Schulze-Tanzil, G G, Schwegmann, A, Sheng, G, Shin, J W, Sugiyama, D, Sugiyama, T, Summers, K M, Takahashi, N, Takai, J, Tanaka, H, Tatsukawa, H, Tomoiu, A, Toyoda, H, van de Wetering, M, van den Berg, L M, Verardo, R, Vijayan, D, Wells, C A, Winteringham, L N, Wolvetang, E, Yamaguchi, Y, Yamamoto, M, Yanagi-Mizuochi, C, Yoneda, M, Yonekura, Y, Zhang, P G, Zucchelli, S, Abugessaisa, I, Arner, E, Harshbarger, J, Kondo, A, Lassmann, T, Lizio, M, Sahin, S, Sengstag, T, Severin, J, Shimoji, H, Suzuki, M, Suzuki, H, Kawai, J, Kondo, N, Itoh, M, Daub, C O, Kasukawa, T, Kawaji, H, Carninci, P, Forrest, A R R & Hayashizaki, Y 2017, ' FANTOM5 CAGE profiles of human and mouse samples ', Scientific Data, vol. 4, 170112 . https://doi.org/10.1038/sdata.2017.112
Scientific Data
Scientific data, 4. Nature Publishing Group
Opis pliku:
application/application/pdf; application/pdf
Dostępność:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::076c9afc5abce3ac80b1dc4baa06a13d
Tytuł:
Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
Autorzy:
Arner, Erik
Daub, Carsten O.
Vitting-Seerup, Kristoffer
Andersson, Robin
Lilje, Berit
Drabløs, Finn
Lennartsson, Andreas
Rönnerblad, Michelle
Hrydziuszko, Olga
Vitezic, Morana
Freeman, Tom C.
M. N. Alhendi, Ahmad
Arner, Peter
Axton, Richard
Baillie, J. Kenneth
Beckhouse, Anthony
Bodega, Beatrice
Briggs, James
Brombacher, Frank
Davis, Margaret
Detmar, Michael
Ehrlund, Anna
Endoh, Mitsuhiro
Eslami, Afsaneh
Fagiolini, Michela
Fairbairn, Lynsey
Faulkner, Geoffrey J.
Ferrai, Carmelo
Fisher, Malcolm E.
Forrester, Lesley
Goldowitz, Daniel
Guler, Reto
Ha, Thomas
Hara, Mitsuko
Herlyn, Meenhard
Ikawa, Tomokatsu
Kai, Chieko
Kawamoto, Hiroshi
M. Khachigian, Levon
Klinken, S. Peter
Kojima, Soichi
Koseki, Haruhiko
Klein, Sarah
Mejhert, Niklas
Miyaguchi, Ken
Mizuno, Yosuke
Morimoto, Mitsuru
Morris, Kelly J.
Mummery, Christine
Nakachi, Yutaka
Ogishima, Soichi
Okada-Hatakeyama, Mariko
Okazaki, Yasushi
Orlando, Valerio
Ovchinnikov, Dmitry
Passier, Robert
Patrikakis, Margaret
Pombo, Ana
Qin, Xian-Yang
Roy, Sugata
Sato, Hiroki
Savvi, Suzana
Saxena, Alka
Schwegmann, Anita
Sugiyama, Daisuke
Swoboda, Rolf
Tanaka, Hiroshi
Tomoiu, Andru
Winteringham, Louise N.
Wolvetang, Ernst
Yanagi-Mizuochi, Chiyo
Yoneda, Misako
Zabierowski, Susan
Zhang, Peter
Abugessaisa, Imad
Bertin, Nicolas
Diehl, Alexander D.
Fukuda, Shiro
Furuno, Masaaki
Harshbarger, Jayson
Hasegawa, Akira
Hori, Fumi
Ishikawa-Kato, Sachi
Ishizu, Yuri
Itoh, Masayoshi
Kawashima, Tsugumi
Kojima, Miki
Kondo, Naoto
Lizio, Marina
Meehan, Terrence F.
Mungall, Christopher J.
Murata, Mitsuyoshi
Nishiyori-Sueki, Hiromi
Sahin, Serkan
Nagao-Sato, Sayaka
Severin, Jessica
de Hoon, Michiel J. L.
Kawai, Jun
Kasukawa, Takeya
Lassmann, Timo
Suzuki, Harukazu
Kawaji, Hideya
Summers, Kim M.
Wells, Christine
Hume, David A.
Forrest, Alistair R. R.
Sandelin, Albin
Carninci, Piero
Hayashizaki, Yoshihide
FANTOM Consortium
Pokaż więcej
Temat:
General
Settore BIO/11 - Biologia Molecolare
Article
Multidisciplinary
Transcription (biology)
Promoter
Regulation of gene expression
Enhancer
Enhancer RNAs
Gene
Transcription factor
Cellular differentiation
Cell biology
Biology
Genetics
Źródło:
Science, 347(6225), 1010-1014. American Association for the Advancement of Science
Dostępność:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c3d2bcd692a9ce63f7ea1e9d11c1f4c6
https://research.utwente.nl/en/publications/transcribed-enhancers-lead-waves-of-coordinated-transcription-in-transitioning-mammalian-cells(a3939bdd-2748-4116-8a7c-ec40cef307f9).html

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