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    Tytuł:
    Application of CRISPR/Cas9 Tools for Genome Editing in the White-Rot Fungus Dichomitus squalens .
    Autorzy:
    Kowalczyk JE; Department of Microbiology, University of Helsinki, Viikinkaari 9, 00790 Helsinki, Finland.
    Saha S; Department of Microbiology, University of Helsinki, Viikinkaari 9, 00790 Helsinki, Finland.
    Mäkelä MR; Department of Microbiology, University of Helsinki, Viikinkaari 9, 00790 Helsinki, Finland.
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    Źródło:
    Biomolecules [Biomolecules] 2021 Oct 15; Vol. 11 (10). Date of Electronic Publication: 2021 Oct 15.
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Basidiomycota/*genetics
    CRISPR-Cas Systems/*genetics
    Fungal Proteins/*genetics
    Polyporaceae/*genetics
    Basidiomycota/growth & development ; Gene Editing/methods ; Lignin/genetics ; RNA, Guide, CRISPR-Cas Systems/genetics ; Wood/genetics ; Wood/microbiology
    SCR Organism:
    Dichomitus squalens
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network.
    Autorzy:
    Khosravi C; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Kowalczyk JE; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Chroumpi T; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Battaglia E; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Aguilar Pontes MV; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Peng M; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Wiebenga A; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Ng V; US Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.
    Lipzen A; US Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.
    He G; US Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.
    Bauer D; US Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.
    Grigoriev IV; US Department of Energy Joint Genome Institute, Walnut Creek, CA, USA.; Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
    de Vries RP; Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands. .
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    Źródło:
    BMC genomics [BMC Genomics] 2019 Nov 14; Vol. 20 (1), pp. 853. Date of Electronic Publication: 2019 Nov 14.
    Typ publikacji:
    Journal Article
    MeSH Terms:
    Gene Expression Profiling*
    Mutation*
    Transcriptome*
    Aspergillus niger/*genetics
    Glycine max/*microbiology
    Zea mays/*microbiology
    Aspergillus niger/growth & development ; Biodegradation, Environmental ; Biomass ; Cellulose/chemistry ; Cellulose/metabolism ; Fungal Proteins/genetics ; Fungal Proteins/metabolism ; Gene Deletion ; Gene Expression Regulation, Fungal ; Hydrolysis
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Expression-based clustering of CAZyme-encoding genes of Aspergillus niger.
    Autorzy:
    Gruben BS; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Microbiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.
    Mäkelä MR; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Department of Food and Environmental Sciences, Division of Microbiology and Biotechnology, Viikki Biocenter 1, University of Helsinki, Helsinki, Finland.
    Kowalczyk JE; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.
    Zhou M; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Current affiliation: ATGM, Avans University of Applied Sciences, Lovensdijkstraat 61-63, 4818, AJ, Breda, The Netherlands.
    Benoit-Gelber I; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Microbiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands.; Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands.; Current affiliation: Center for Structural and Functional Genomics, Concordia University, 7141 Sherbrooke St. W, Montreal, QC, Canada.
    De Vries RP; Fungal Physiology, Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands. .; Microbiology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands. .; Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584, CT, Utrecht, The Netherlands. .
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    Źródło:
    BMC genomics [BMC Genomics] 2017 Nov 23; Vol. 18 (1), pp. 900. Date of Electronic Publication: 2017 Nov 23.
    Typ publikacji:
    Journal Article
    MeSH Terms:
    Gene Expression Regulation, Fungal*
    Aspergillus niger/*genetics
    Aspergillus niger/enzymology ; Aspergillus niger/metabolism ; Carbohydrate Metabolism/genetics ; Cluster Analysis ; Fungal Proteins/metabolism ; Gene Expression Profiling ; Gene Expression Regulation, Enzymologic ; Inulin/metabolism ; Mutation ; Pectins/metabolism ; Starch/metabolism ; Sucrose/metabolism ; Trans-Activators/metabolism
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Genetic Interaction of Aspergillus nidulans galR, xlnR and araR in Regulating D-Galactose and L-Arabinose Release and Catabolism Gene Expression.
    Autorzy:
    Kowalczyk JE; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Gruben BS; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.; Microbiology, Utrecht University, Utrecht, the Netherlands.
    Battaglia E; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.; Microbiology, Utrecht University, Utrecht, the Netherlands.
    Wiebenga A; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    Majoor E; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
    de Vries RP; Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre & Fungal Molecular Physiology, Utrecht University, Utrecht, the Netherlands.
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    Źródło:
    PloS one [PLoS One] 2015 Nov 18; Vol. 10 (11), pp. e0143200. Date of Electronic Publication: 2015 Nov 18 (Print Publication: 2015).
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Epistasis, Genetic*
    Gene Expression Regulation, Fungal*
    Aspergillus nidulans/*genetics
    Escherichia coli Proteins/*genetics
    Fungal Proteins/*genetics
    Repressor Proteins/*genetics
    Trans-Activators/*genetics
    Amino Acid Sequence ; Arabinose/metabolism ; Aspergillus nidulans/metabolism ; Escherichia coli Proteins/metabolism ; Fungal Proteins/metabolism ; Galactose/metabolism ; Gene Expression Profiling ; Molecular Sequence Data ; Phenotype ; Repressor Proteins/metabolism ; Sequence Alignment ; Sequence Homology, Amino Acid ; Signal Transduction ; Trans-Activators/metabolism ; Xylose/metabolism
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
      Wyświetlanie 1-5 z 5

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