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    Wyświetlanie 1-6 z 6
    Tytuł:
    Evolution and codon usage bias of mitochondrial and nuclear genomes in Aspergillus section Flavi.
    Autorzy:
    Hugaboom M; Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.
    Hatmaker EA; Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.; Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN 37235, USA.
    LaBella AL; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
    Rokas A; Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA.; Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN 37235, USA.
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    Źródło:
    G3 (Bethesda, Md.) [G3 (Bethesda)] 2023 Jan 12; Vol. 13 (1).
    Typ publikacji:
    Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Codon Usage*
    Genome, Mitochondrial*
    Phylogeny ; Codon/genetics ; Genomics ; Aspergillus/genetics
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Mosaic patterns of selection in genomic regions associated with diverse human traits.
    Autorzy:
    Abraham A; Vanderbilt University Medical Center, Vanderbilt University, Nashville, Tennessee, United States of America.
    LaBella AL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.; Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America.; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, North Carolina, United States of America.; North Carolina Research Center, Kannapolis, North Carolina, United States of America.
    Capra JA; Bakar Computational Health Sciences Institute, University of California, San Francisco, California, United States of America.; Department of Epidemiology and Biostatistics, University of California, San Francisco, California, United States of America.
    Rokas A; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.; Evolutionary Studies Initiative, Vanderbilt University, Nashville, Tennessee, United States of America.; Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America.; Vanderbilt Genetics Institute, Vanderbilt University, Nashville, Tennessee, United States of America.
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    Źródło:
    PLoS genetics [PLoS Genet] 2022 Nov 07; Vol. 18 (11), pp. e1010494. Date of Electronic Publication: 2022 Nov 07 (Print Publication: 2022).
    Typ publikacji:
    Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't
    MeSH Terms:
    Genome-Wide Association Study*
    Selection, Genetic*
    Humans ; Linkage Disequilibrium ; Phenotype ; Genomics ; Polymorphism, Single Nucleotide/genetics ; Genome, Human/genetics
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Signatures of optimal codon usage in metabolic genes inform budding yeast ecology.
    Autorzy:
    LaBella AL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Opulente DA; Department of Biology, Villanova University, Villanova, Pennsylvania, United States of America.
    Steenwyk JL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Hittinger CT; Laboratory of Genetics, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, Center for Genomic Science Innovation, J.F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
    Rokas A; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
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    Źródło:
    PLoS biology [PLoS Biol] 2021 Apr 19; Vol. 19 (4), pp. e3001185. Date of Electronic Publication: 2021 Apr 19 (Print Publication: 2021).
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Ecosystem*
    Saccharomycetales*/classification
    Saccharomycetales*/genetics
    Saccharomycetales*/metabolism
    Codon Usage/*physiology
    Metabolic Networks and Pathways/*genetics
    Carbohydrate Metabolism/genetics ; Codon ; Galactose/metabolism ; Gene-Environment Interaction ; Genes, Fungal/physiology ; Genetic Association Studies ; Organisms, Genetically Modified ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/growth & development ; Saccharomyces cerevisiae/metabolism
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknieSzczegóły
    Tytuł:
    Variation and selection on codon usage bias across an entire subphylum.
    Autorzy:
    LaBella AL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Opulente DA; Laboratory of Genetics, Genome Center of Wisconsin, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Wisconsin, United States of America.
    Steenwyk JL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Hittinger CT; Laboratory of Genetics, Genome Center of Wisconsin, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Wisconsin, United States of America.
    Rokas A; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
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    Źródło:
    PLoS genetics [PLoS Genet] 2019 Jul 31; Vol. 15 (7), pp. e1008304. Date of Electronic Publication: 2019 Jul 31 (Print Publication: 2019).
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Codon Usage*
    Saccharomycetales/*genetics
    Bias ; Genetic Variation ; Genome, Fungal ; Selection, Genetic
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
    Tytuł:
    Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts.
    Autorzy:
    Steenwyk JL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Opulente DA; Laboratory of Genetics, Genome Center of Wisconsin, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Wisconsin, United States of America.
    Kominek J; Laboratory of Genetics, Genome Center of Wisconsin, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Wisconsin, United States of America.
    Shen XX; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Zhou X; Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, China.
    Labella AL; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Bradley NP; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Eichman BF; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
    Čadež N; University of Ljubljana Biotechnical Faculty, Department of Food Science and Technology, University of Ljubljana, Ljubljana, Slovenia.
    Libkind D; Laboratorio de Microbiología Aplicada, Biotecnología y Bioinformática, Instituto Andino Patagónico de Tecnologías Biológicas y Geoambientales, Universidad Nacional del Comahue-CONICET, San Carlos de Bariloche, Río Negro, Argentina.
    DeVirgilio J; Mycotoxin Prevention and Applied Microbiology Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, United States Department of Agriculture, Peoria, Illinois, United States of America.
    Hulfachor AB; Laboratory of Genetics, Genome Center of Wisconsin, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
    Kurtzman CP; Mycotoxin Prevention and Applied Microbiology Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, United States Department of Agriculture, Peoria, Illinois, United States of America.
    Hittinger CT; Laboratory of Genetics, Genome Center of Wisconsin, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, J. F. Crow Institute for the Study of Evolution, University of Wisconsin-Madison, Wisconsin, United States of America.
    Rokas A; Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, United States of America.
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    Źródło:
    PLoS biology [PLoS Biol] 2019 May 21; Vol. 17 (5), pp. e3000255. Date of Electronic Publication: 2019 May 21 (Print Publication: 2019).
    Typ publikacji:
    Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
    MeSH Terms:
    Genes, Fungal*
    Phylogeny*
    Cell Cycle/*genetics
    DNA Repair/*genetics
    Saccharomycetales/*cytology
    Saccharomycetales/*genetics
    Base Sequence ; DNA Damage/genetics ; Evolution, Molecular ; Phenotype
    Czasopismo naukowe
    Pełny tekst  Link otwiera się w nowym oknie Pełny tekstSzczegóły
      Wyświetlanie 1-6 z 6

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