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Wyświetlanie 1-18 z 18
Tytuł:
Chromosomal phase improves aneuploidy detection in non-invasive prenatal testing at low fetal DNA fractions.
Autorzy:
Genovese G; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. .; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. .; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA. .
Mello CJ; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA.
Loh PR; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 02115, USA.
Handsaker RE; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA.
Kashin S; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA.
Whelan CW; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA.
Bayer-Zwirello LA; Steward St. Elizabeth's Medical Center, Tufts University School of Medicine, Boston, MA, 02135, USA.
McCarroll SA; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Genetics, Harvard Medical School, Boston, MA, 02115, USA.
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Źródło:
Scientific reports [Sci Rep] 2022 Jul 14; Vol. 12 (1), pp. 12025. Date of Electronic Publication: 2022 Jul 14.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Cell-Free Nucleic Acids*/genetics
Prenatal Diagnosis*/methods
Aneuploidy ; Chromosomes ; DNA/genetics ; Female ; Fetus ; Humans ; Placenta ; Pregnancy ; Trisomy/diagnosis ; Trisomy/genetics
Czasopismo naukowe
Tytuł:
Protein-coding repeat polymorphisms strongly shape diverse human phenotypes.
Autorzy:
Mukamel RE; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.
Handsaker RE; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard University, Boston, MA, USA.; Department of Genetics, Harvard Medical School, Boston, MA, USA.
Sherman MA; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.; Computer Science and Artificial Intelligence Laboratory, MIT, Boston, MA, USA.
Barton AR; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.; Bioinformatics and Integrative Genomics Program, Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Zheng Y; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard University, Boston, MA, USA.
McCarroll SA; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard University, Boston, MA, USA.; Department of Genetics, Harvard Medical School, Boston, MA, USA.
Loh PR; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.; Program in Medical and Population Genetics, Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard University, Boston, MA, USA.
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Źródło:
Science (New York, N.Y.) [Science] 2021 Sep 24; Vol. 373 (6562), pp. 1499-1505. Date of Electronic Publication: 2021 Sep 23.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome, Human*
Phenotype*
Polymorphism, Genetic*
Minisatellite Repeats/*genetics
Aggrecans/genetics ; Antigens/genetics ; Black People ; Body Height/genetics ; Genetic Association Studies ; Hair ; Haplotypes ; Humans ; Intermediate Filament Proteins/genetics ; Kidney/physiology ; Lipoprotein(a)/blood ; Lipoprotein(a)/genetics ; Mucin-1/genetics ; Polymorphism, Single Nucleotide ; Polynucleotide Adenylyltransferase/genetics ; White People/genetics ; Exome Sequencing
Czasopismo naukowe
Tytuł:
Estimating the effective sample size in association studies of quantitative traits.
Autorzy:
Ziyatdinov A; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.
Kim J; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.
Prokopenko D; Genetics and Aging Unit and McCance Center for Brain Health, Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.; Harvard Medical School, Boston, MA 02115, USA.
Privé F; National Centre for Register-Based Research, Aarhus University, Aarhus 8210, Denmark.
Laporte F; Department of Computational Biology-USR 3756 CNRS, Institut Pasteur, Paris 75015, France.
Loh PR; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Kraft P; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.
Aschard H; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.; Department of Computational Biology-USR 3756 CNRS, Institut Pasteur, Paris 75015, France.
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Źródło:
G3 (Bethesda, Md.) [G3 (Bethesda)] 2021 Jun 17; Vol. 11 (6).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Genome-Wide Association Study*/methods
Multifactorial Inheritance*/genetics
Humans ; Sample Size ; Phenotype ; Linear Models ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
Genetically predicted telomere length is associated with clonal somatic copy number alterations in peripheral leukocytes.
Autorzy:
Brown DW; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, United States of America.; Cancer Prevention Fellowship Program, Division of Cancer Prevention, National Cancer Institute, Rockville, MD, United States of America.
Lin SH; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, United States of America.
Loh PR; Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, United States of America.
Chanock SJ; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, United States of America.
Savage SA; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, United States of America.
Machiela MJ; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2020 Oct 22; Vol. 16 (10), pp. e1009078. Date of Electronic Publication: 2020 Oct 22 (Print Publication: 2020).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Clonal Evolution/*genetics
Neoplasms/*blood
Telomere/*genetics
Telomere Homeostasis/*genetics
Adult ; Aged ; Cell Division/genetics ; DNA Copy Number Variations/genetics ; Female ; Genetics, Population ; Humans ; Leukocytes/metabolism ; Leukocytes/pathology ; Male ; Middle Aged ; Neoplasms/epidemiology ; Neoplasms/genetics ; United Kingdom/epidemiology
Czasopismo naukowe
Tytuł:
Mental Health and Coping in Parents of Children with Autism Spectrum Disorder (ASD) in Singapore: An Examination of Gender Role in Caring.
Autorzy:
Ang KQP; James Cook University, 149 Sims Drive, Singapore, 387380, Singapore. .
Loh PR; National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore, 637616, Singapore.
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Źródło:
Journal of autism and developmental disorders [J Autism Dev Disord] 2019 May; Vol. 49 (5), pp. 2129-2145.
Typ publikacji:
Journal Article
MeSH Terms:
Adaptation, Psychological*
Empathy*
Gender Identity*
Mental Health*
Autism Spectrum Disorder/*psychology
Adult ; Child ; Female ; Humans ; Male ; Middle Aged ; Parents/psychology ; Singapore
Czasopismo naukowe
Tytuł:
Stepwise Distributed Open Innovation Contests for Software Development: Acceleration of Genome-Wide Association Analysis.
Autorzy:
Hill A; Research Business Technology, Pfizer Research, 1 Portland Street, Cambridge, Massachusetts, 02139 USA.
Loh PR; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, Massachusetts, 02142 USA.
Bharadwaj RB; Babbage Analytic and Innovation, Boston Massachusetts, USA.; Current affiliation, Nyrasta LLC.
Pons P; Current affiliation, Criteo Labs, 32 Rue Blanche, 75009, Paris, France.
Shang J; Current affiliation, Computer Science Department, University of Illinois at Urbana-Champaign 201 N Goodwin Ave, Urbana, Illinois, USA.
Guinan E; Department of Radiation Oncology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, Massachusetts, 02215, USA.; Harvard Business School, Boston, Massachusetts, 02163 USA.
Lakhani K; Babbage Analytic and Innovation, Boston Massachusetts, USA.; Harvard Business School, Boston, Massachusetts, 02163 USA.; Harvard-NASA Tournament Lab, Institute for Quantitative Social Science 1737 Cambridge Street, Cambridge Massachusetts, 02138, USA.
Kilty I; Department of Inflammation and Immunology, Pfizer Research, 1 Portland Street, Cambridge, Massachusetts, 02139, USA.
Jelinsky SA; Department of Inflammation and Immunology, Pfizer Research, 1 Portland Street, Cambridge, Massachusetts, 02139, USA.
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Źródło:
GigaScience [Gigascience] 2017 May 01; Vol. 6 (5), pp. 1-10.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural
MeSH Terms:
Crowdsourcing*
Genome-Wide Association Study*
Software*
Genotype ; Humans ; Inventions ; Logistic Models ; Phenotype
Czasopismo naukowe
Tytuł:
Calibrating the Human Mutation Rate via Ancestral Recombination Density in Diploid Genomes.
Autorzy:
Lipson M; Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America.
Loh PR; Department of Epidemiology, Harvard School of Public Health, Boston, Massachusetts, United States of America.; Medical and Population Genetics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
Sankararaman S; Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America.; Medical and Population Genetics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
Patterson N; Medical and Population Genetics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
Berger B; Medical and Population Genetics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.; Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Reich D; Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America.; Medical and Population Genetics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.; Howard Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
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Źródło:
PLoS genetics [PLoS Genet] 2015 Nov 12; Vol. 11 (11), pp. e1005550. Date of Electronic Publication: 2015 Nov 12 (Print Publication: 2015).
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Evolution, Molecular*
Mutation Rate*
Recombination, Genetic*
Mutation/*genetics
Animals ; Diploidy ; Genetics, Population ; Genome, Human ; Hominidae/genetics ; Humans ; Pedigree ; Phylogeny
Czasopismo naukowe
Tytuł:
Partitioning heritability by functional annotation using genome-wide association summary statistics.
Autorzy:
Finucane HK; Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Bulik-Sullivan B; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Gusev A; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Trynka G; Division of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Division of Rheumatology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Partners Center for Personalized Genetic Medicine, Boston, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, UK.
Reshef Y; Department of Computer Science, Harvard University, Cambridge, Massachusetts, USA.
Loh PR; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Anttila V; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Xu H; Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Zang C; Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Farh K; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Epigenomics Program, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Ripke S; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Day FR; Medical Research Council (MRC) Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Purcell S; Division of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Division of Rheumatology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Department of Psychiatry, Mount Sinai School of Medicine, New York, New York, USA.
Stahl E; Department of Psychiatry, Mount Sinai School of Medicine, New York, New York, USA.
Lindstrom S; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Perry JR; Medical Research Council (MRC) Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Okada Y; Department of Human Genetics and Disease Diversity, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.; Laboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Raychaudhuri S; Division of Genetics, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Division of Rheumatology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.; Partners Center for Personalized Genetic Medicine, Boston, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Faculty of Medical and Human Sciences, University of Manchester, Manchester, UK.
Daly MJ; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Patterson N; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Neale BM; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.; Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Price AL; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
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Corporate Authors:
ReproGen Consortium
Schizophrenia Working Group of the Psychiatric Genomics Consortium
RACI Consortium
Źródło:
Nature genetics [Nat Genet] 2015 Nov; Vol. 47 (11), pp. 1228-35. Date of Electronic Publication: 2015 Sep 28.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Polymorphism, Single Nucleotide*
Disease/*genetics
Genetic Predisposition to Disease/*genetics
Genome-Wide Association Study/*methods
Algorithms ; Computer Simulation ; Female ; Gene Frequency ; Histones/metabolism ; Humans ; Inheritance Patterns ; Lysine/metabolism ; Male ; Methylation ; Models, Genetic
Czasopismo naukowe
Tytuł:
An atlas of genetic correlations across human diseases and traits.
Autorzy:
Bulik-Sullivan B; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Finucane HK; Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Anttila V; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Gusev A; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Day FR; Medical Research Council (MRC) Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Loh PR; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Duncan L; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Perry JR; Medical Research Council (MRC) Epidemiology Unit, University of Cambridge School of Clinical Medicine, Institute of Metabolic Science, Cambridge Biomedical Campus, Cambridge, UK.
Patterson N; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Robinson EB; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Daly MJ; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Price AL; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.; Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Neale BM; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Stanley Center for Psychiatric Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA.
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Corporate Authors:
ReproGen Consortium
Psychiatric Genomics Consortium
Genetic Consortium for Anorexia Nervosa of the Wellcome Trust Case Control Consortium 3
Źródło:
Nature genetics [Nat Genet] 2015 Nov; Vol. 47 (11), pp. 1236-41. Date of Electronic Publication: 2015 Sep 28.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Disease/*genetics
Genetic Association Studies/*methods
Genome-Wide Association Study/*methods
Quantitative Trait Loci/*genetics
Algorithms ; Computer Simulation ; Female ; Genetic Association Studies/statistics & numerical data ; Genetic Predisposition to Disease/genetics ; Genome-Wide Association Study/statistics & numerical data ; Genotype ; Humans ; Linkage Disequilibrium ; Male ; Models, Genetic ; Phenotype ; Polymorphism, Single Nucleotide ; Regression Analysis
Czasopismo naukowe
Tytuł:
Efficient Bayesian mixed-model analysis increases association power in large cohorts.
Autorzy:
Loh PR; 1] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [2] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.
Tucker G; 1] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [2] Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA. [3] Computer Science and Artificial Intelligence Laboratory, Cambridge, Massachusetts, USA.
Bulik-Sullivan BK; 1] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA. [2] Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, Massachusetts, USA.
Vilhjálmsson BJ; 1] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [2] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.
Finucane HK; Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Salem RM; 1] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA. [2] Department of Endocrinology, Children's Hospital Boston, Boston, Massachusetts, USA.
Chasman DI; Division of Preventive Medicine, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Ridker PM; Division of Preventive Medicine, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Neale BM; 1] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA. [2] Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, Massachusetts, USA.
Berger B; 1] Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA. [2] Computer Science and Artificial Intelligence Laboratory, Cambridge, Massachusetts, USA.
Patterson N; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA.
Price AL; 1] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [2] Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA. [3] Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
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Źródło:
Nature genetics [Nat Genet] 2015 Mar; Vol. 47 (3), pp. 284-90. Date of Electronic Publication: 2015 Feb 02.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Bayes Theorem*
Genome, Human*
Genetic Association Studies/*methods
Algorithms ; Female ; Genotyping Techniques ; Humans ; Linear Models ; Polymorphism, Single Nucleotide ; Quantitative Trait Loci
Czasopismo naukowe
Tytuł:
LD Score regression distinguishes confounding from polygenicity in genome-wide association studies.
Autorzy:
Bulik-Sullivan BK; 1] Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [2] Analytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA. [3] Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Loh PR; 1] Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [2] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Finucane HK; 1] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [2] Department of Mathematics, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Ripke S; 1] Analytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA. [2] Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Yang J; Queensland Brain Institute, University of Queensland, Brisbane, Queensland, Australia.
Patterson N; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Daly MJ; 1] Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [2] Analytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA. [3] Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Price AL; 1] Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [2] Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA. [3] Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Neale BM; 1] Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [2] Analytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA. [3] Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
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Corporate Authors:
Schizophrenia Working Group of the Psychiatric Genomics Consortium
Źródło:
Nature genetics [Nat Genet] 2015 Mar; Vol. 47 (3), pp. 291-5. Date of Electronic Publication: 2015 Feb 02.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Linkage Disequilibrium*
Genome-Wide Association Study/*methods
Computer Simulation ; Genome, Human ; Humans ; Polymorphism, Single Nucleotide ; Regression Analysis ; Sample Size
Czasopismo naukowe
Tytuł:
Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.
Autorzy:
Meyer P
Cokelaer T
Chandran D
Kim KH
Loh PR
Tucker G
Lipson M
Berger B
Kreutz C
Raue A
Steiert B
Timmer J
Bilal E
Sauro HM
Stolovitzky G
Saez-Rodriguez J
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Źródło:
BMC systems biology [BMC Syst Biol] 2014 Feb 07; Vol. 8, pp. 13. Date of Electronic Publication: 2014 Feb 07.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Regulatory Networks*
Computational Biology/*methods
Computer Simulation ; Kinetics ; Models, Genetic ; Time Factors
Czasopismo naukowe
Tytuł:
A sampling framework for incorporating quantitative mass spectrometry data in protein interaction analysis.
Autorzy:
Tucker G; Mathematics Department and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. .
Loh PR
Berger B
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Źródło:
BMC bioinformatics [BMC Bioinformatics] 2013 Oct 04; Vol. 14, pp. 299. Date of Electronic Publication: 2013 Oct 04.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Computational Biology/*methods
Mass Spectrometry/*methods
Protein Interaction Mapping/*methods
Proteins/*chemistry
Proteins/*metabolism
Chromatography, Affinity/methods ; Databases, Protein
Czasopismo naukowe
Tytuł:
Prize-based contests can provide solutions to computational biology problems.
Autorzy:
Lakhani KR
Boudreau KJ
Loh PR
Backstrom L
Baldwin C
Lonstein E
Lydon M
MacCormack A
Arnaout RA
Guinan EC
Pokaż więcej
Źródło:
Nature biotechnology [Nat Biotechnol] 2013 Feb; Vol. 31 (2), pp. 108-11.
Typ publikacji:
Letter; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Awards and Prizes*
Computational Biology*/economics
Computational Biology*/legislation & jurisprudence
Computational Biology*/methods
Humans
Raport
Tytuł:
Reconstructing Roma history from genome-wide data.
Autorzy:
Moorjani P; Department of Genetics, Harvard Medical School, Boston, Massachusetts, United States of America. />Patterson N
Loh PR
Lipson M
Kisfali P
Melegh BI
Bonin M
Kádaši L
Rieß O
Berger B
Reich D
Melegh B
Pokaż więcej
Źródło:
PloS one [PLoS One] 2013; Vol. 8 (3), pp. e58633. Date of Electronic Publication: 2013 Mar 13.
Typ publikacji:
Historical Article; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Genome, Human*
Ethnicity/*genetics
Ethnicity/*history
Asia/ethnology ; Europe/ethnology ; Founder Effect ; Gene Flow/genetics ; History, Medieval ; Humans ; Oligonucleotide Array Sequence Analysis ; Polymorphism, Single Nucleotide/genetics
Czasopismo naukowe
Tytuł:
Compressive genomics.
Autorzy:
Loh PR; Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Baym M
Berger B
Pokaż więcej
Źródło:
Nature biotechnology [Nat Biotechnol] 2012 Jul 10; Vol. 30 (7), pp. 627-30. Date of Electronic Publication: 2012 Jul 10.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Algorithms*
Genome, Human*
Computational Biology/*methods
Data Mining ; High-Throughput Nucleotide Sequencing ; Humans ; Yeasts/genetics
Czasopismo naukowe
Tytuł:
Assessing statistical significance in causal graphs.
Autorzy:
Chindelevitch L; Computational Sciences Center of Emphasis, Pfizer Worldwide Research & Development, Cambridge, MA, USA.
Loh PR
Enayetallah A
Berger B
Ziemek D
Pokaż więcej
Źródło:
BMC bioinformatics [BMC Bioinformatics] 2012 Feb 20; Vol. 13, pp. 35. Date of Electronic Publication: 2012 Feb 20.
Typ publikacji:
Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Algorithms*
Models, Biological*
Animals ; Chondrocytes/cytology ; Chondrocytes/metabolism ; Dexamethasone ; Gene Expression Profiling ; Hypoxia/drug therapy ; Hypoxia/genetics ; Hypoxia/metabolism ; Mice ; Oligonucleotide Array Sequence Analysis ; Receptors, Glucocorticoid/metabolism ; Statistical Distributions
Czasopismo naukowe
Tytuł:
Phenotype prediction using regularized regression on genetic data in the DREAM5 Systems Genetics B Challenge.
Autorzy:
Loh PR; Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Tucker G
Berger B
Pokaż więcej
Źródło:
PloS one [PLoS One] 2011; Vol. 6 (12), pp. e29095. Date of Electronic Publication: 2011 Dec 28.
Typ publikacji:
Journal Article; Research Support, U.S. Gov't, Non-P.H.S.
MeSH Terms:
Phytophthora/*physiology
Glycine max/*microbiology
Genotype ; Phenotype ; Glycine max/genetics
Czasopismo naukowe
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