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Wyszukujesz frazę ""McDonald, Daniel"" wg kryterium: Autor


Tytuł :
Context-aware dimensionality reduction deconvolutes gut microbial community dynamics
Autorzy :
Martino, CameronAff1, Aff2, Aff3
Shenhav, Liat
Marotz, Clarisse A.
Armstrong, GeorgeAff2, Aff3
McDonald, Daniel
Vázquez-Baeza, YoshikiAff1, Aff5
Morton, James T.
Jiang, Lingjing
Dominguez-Bello, Maria GloriaAff8, Aff9
Swafford, Austin D.
Halperin, EranAff4, Aff10, Aff11, Aff12, Aff13
Knight, RobAff1, Aff3, Aff14, Aff15
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Źródło :
Nature Biotechnology: The Science and Business of Biotechnology. 39(2):165-168
Czasopismo naukowe
Tytuł :
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
Autorzy :
Tripathi, AnupriyaAff1, Aff2, Aff3
Vázquez-Baeza, YoshikiAff4, Aff5
Gauglitz, Julia M.Aff3, Aff6
Wang, Mingxun
Dührkop, Kai
Nothias-Esposito, Mélissa
Acharya, Deepa D.Aff3, Aff8
Ernst, MadeleineAff3, Aff6, Aff9
van der Hooft, Justin J. J.
Zhu, Qiyun
McDonald, Daniel
Brejnrod, Asker D.
Gonzalez, Antonio
Handelsman, Jo
Fleischauer, Markus
Ludwig, Marcus
Böcker, Sebastian
Nothias, Louis-Félix
Knight, RobAff2, Aff4, Aff5, Aff11
Dorrestein, Pieter C.Aff3, Aff5, Aff6
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Źródło :
Nature Chemical Biology. 17(2):146-151
Czasopismo naukowe
Tytuł :
Reply to: Examining microbe–metabolite correlations by linear methods
Autorzy :
Morton, James T.Aff1, Aff2
McDonald, DanielAff1, Aff3
Aksenov, Alexander A.Aff4, Aff5
Nothias, Louis FelixAff4, Aff5
Foulds, James R.
Quinn, Robert A.
Badri, Michelle H.
Swenson, Tami L.
Van Goethem, Marc W.
Northen, Trent R.Aff9, Aff10
Vazquez-Baeza, YoshikiAff3, Aff11
Wang, MingxunAff4, Aff5
Bokulich, Nicholas A.Aff12, Aff13
Watters, Aaron
Song, Se JinAff1, Aff3
Bonneau, RichardAff8, Aff14, Aff15, Aff16
Dorrestein, Pieter C.Aff4, Aff5
Knight, RobAff1, Aff2, Aff17, Aff18
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Źródło :
Nature Methods: Techniques for life scientists and chemists. 18(1):40-41
Czasopismo naukowe
Tytuł :
SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment
Autorzy :
Marotz, ClarisseAff1, Aff2
Belda-Ferre, PedroAff1, Aff3
Ali, Farhana
Das, PromiAff1, Aff2
Huang, ShiAff1, Aff3
Cantrell, KalenAff3, Aff4
Jiang, LingjingAff3, Aff5
Martino, CameronAff1, Aff3, Aff6
Diner, Rachel E.Aff1, Aff2
Rahman, GibraanAff1, Aff6
McDonald, Daniel
Armstrong, GeorgeAff1, Aff3, Aff6
Kodera, ShoAff1, Aff2
Donato, Sonya
Ecklu-Mensah, GertrudeAff1, Aff2
Gottel, NeilAff1, Aff2
Salas Garcia, Mariana C.Aff1, Aff2
Chiang, Leslie Y.
Salido, Rodolfo A.
Shaffer, Justin P.
Bryant, Mac Kenzie
Sanders, Karenina
Humphrey, Greg
Ackermann, Gail
Haiminen, Niina
Beck, Kristen L.
Kim, Ho-Cheol
Carrieri, Anna Paola
Parida, Laxmi
Vázquez-Baeza, Yoshiki
Torriani, Francesca J.
Knight, RobAff1, Aff3, Aff4, Aff12
Gilbert, JackAff1, Aff2, Aff3
Sweeney, Daniel A.
Allard, Sarah M.Aff1, Aff2
Pokaż więcej
Źródło :
Microbiome. 9(1)
Czasopismo naukowe
Tytuł :
Assessment of the microbiome during bacteriophage therapy in combination with systemic antibiotics to treat a case of staphylococcal device infection
Autorzy :
Mu, AndreAff1, Aff2
McDonald, Daniel
Jarmusch, Alan K.Aff4, Aff5
Martino, CameronAff3, Aff6, Aff7
Brennan, Caitriona
Bryant, Mackenzie
Humphrey, Gregory C.
Toronczak, Julia
Schwartz, Tara
Nguyen, Dominic
Ackermann, Gail
D’Onofrio, Anthony
Strathdee, Steffanie A.
Schooley, Robert T.
Dorrestein, Pieter C.Aff3, Aff4, Aff5, Aff7
Knight, RobAff3, Aff7, Aff10, Aff11
Aslam, Saima
Pokaż więcej
Źródło :
Microbiome. 9(1)
Czasopismo naukowe
Tytuł :
Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment
Autorzy :
Minich, Jeremiah J.
Ali, Farhana
Marotz, Clarisse
Belda-Ferre, Pedro
Chiang, Leslie
Shaffer, Justin P.
Carpenter, Carolina S.
McDonald, Daniel
Gilbert, JackAff1, Aff3, Aff5
Allard, Sarah M.
Allen, Eric E.Aff1, Aff5, Aff6
Knight, RobAff3, Aff5, Aff7, Aff8
Sweeney, Daniel A.
Swafford, Austin D.
Pokaż więcej
Źródło :
Microbiome. 9(1)
Czasopismo naukowe
Tytuł :
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Autorzy :
Bolyen, Evan
Rideout, Jai Ram
Dillon, Matthew R.
Bokulich, Nicholas A.
Abnet, Christian C.
Al-Ghalith, Gabriel A.
Alexander, HarrietAff4, Aff5
Alm, Eric J.Aff6, Aff7
Arumugam, Manimozhiyan
Asnicar, Francesco
Bai, YangAff10, Aff11, Aff12
Bisanz, Jordan E.
Bittinger, KyleAff14, Aff15
Brejnrod, Asker
Brislawn, Colin J.
Brown, C. Titus
Callahan, Benjamin J.Aff17, Aff18
Caraballo-Rodríguez, Andrés Mauricio
Chase, John
Cope, Emily K.Aff1, Aff20
Da Silva, Ricardo
Diener, Christian
Dorrestein, Pieter C.
Douglas, Gavin M.
Durall, Daniel M.
Duvallet, Claire
Edwardson, Christian F.
Ernst, MadeleineAff19, Aff25
Estaki, Mehrbod
Fouquier, JenniferAff27, Aff28
Gauglitz, Julia M.
Gibbons, Sean M.Aff21, Aff29
Gibson, Deanna L.Aff30, Aff31
Gonzalez, Antonio
Gorlick, Kestrel
Guo, Jiarong
Hillmann, Benjamin
Holmes, Susan
Holste, HannesAff32, Aff36
Huttenhower, CurtisAff37, Aff38
Huttley, Gavin A.
Janssen, Stefan
Jarmusch, Alan K.
Jiang, Lingjing
Kaehler, Benjamin D.Aff39, Aff42
Kang, Kyo BinAff19, Aff43
Keefe, Christopher R.
Keim, Paul
Kelley, Scott T.
Knights, DanAff34, Aff45
Koester, IrinaAff19, Aff46
Kosciolek, Tomasz
Kreps, Jorden
Langille, Morgan G. I.
Lee, Joslynn
Ley, RuthAff50, Aff51
Liu, Yong-XinAff10, Aff11
Loftfield, Erikka
Lozupone, Catherine
Maher, Massoud
Marotz, Clarisse
Martin, Bryan D.
McDonald, Daniel
McIver, Lauren J.Aff37, Aff38
Melnik, Alexey V.
Metcalf, Jessica L.
Morgan, Sydney C.
Morton, Jamie T.Aff32, Aff52
Naimey, Ahmad Turan
Navas-Molina, Jose A.Aff32, Aff52, Aff56
Nothias, Louis Felix
Orchanian, Stephanie B.
Pearson, Talima
Peoples, Samuel L.Aff58, Aff59
Petras, Daniel
Preuss, Mary Lai
Pruesse, Elmar
Rasmussen, Lasse Buur
Rivers, Adam
Robeson, II, Michael S.
Rosenthal, Patrick
Segata, Nicola
Shaffer, MichaelAff27, Aff28
Shiffer, Arron
Sinha, Rashmi
Song, Se Jin
Spear, John R.
Swafford, Austin D.
Thompson, Luke R.Aff64, Aff65
Torres, Pedro J.
Trinh, Pauline
Tripathi, AnupriyaAff19, Aff32, Aff68
Turnbaugh, Peter J.
Ul-Hasan, Sabah
van der Hooft, Justin J. J.
Vargas, Fernando
Vázquez-Baeza, Yoshiki
Vogtmann, Emily
von Hippel, Max
Walters, William
Wan, Yunhu
Wang, Mingxun
Warren, Jonathan
Weber, Kyle C.Aff61, Aff74
Williamson, Charles H. D.
Willis, Amy D.
Xu, Zhenjiang Zech
Zaneveld, Jesse R.
Zhang, Yilong
Zhu, Qiyun
Knight, RobAff32, Aff57, Aff79
Caporaso, J. GregoryAff1, Aff20
Pokaż więcej
Źródło :
Nature Biotechnology: The Science and Business of Biotechnology. 37(8):852-857
Czasopismo naukowe
Tytuł :
Author Correction: Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity
Autorzy :
Kaplan, Robert C.Aff1, Aff2
Wang, Zheng
Usyk, Mykhaylo
Sotres-Alvarez, Daniela
Daviglus, Martha L.
Schneiderman, Neil
Talavera, Gregory A.
Gellman, Marc D.
Thyagarajan, Bharat
Moon, Jee-Young
Vázquez-Baeza, YoshikiAff9, Aff10
McDonald, Daniel
Williams-Nguyen, Jessica S.
Wu, Michael C.
North, Kari E.
Shaffer, Justin
Sollecito, Christopher C.
Qi, Qibin
Isasi, Carmen R.
Wang, Tao
Knight, RobAff10, Aff11, Aff13, Aff14
Burk, Robert D.Aff1, Aff3, Aff15
Pokaż więcej
Źródło :
Genome Biology. 21(1)
Czasopismo naukowe
Tytuł :
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea
Autorzy :
Zhu, Qiyun
Mai, Uyen
Pfeiffer, Wayne
Janssen, StefanAff1, Aff4
Asnicar, Francesco
Sanders, Jon G.
Belda-Ferre, Pedro
Al-Ghalith, Gabriel A.
Kopylova, Evguenia
McDonald, Daniel
Kosciolek, TomaszAff1, Aff7
Yin, John B.Aff8, Aff9
Huang, ShiAff1, Aff10
Salam, Nimaichand
Jiao, Jian-Yu
Wu, ZijunAff1, Aff12
Xu, Zhenjiang Z.
Cantrell, Kalen
Yang, Yimeng
Sayyari, Erfan
Rabiee, Maryam
Morton, James T.Aff1, Aff2
Podell, Sheila
Knights, Dan
Li, Wen-Jun
Huttenhower, CurtisAff14, Aff15
Segata, Nicola
Smarr, LarryAff2, Aff16, Aff17
Mirarab, Siavash
Knight, RobAff1, Aff2, Aff16, Aff18
Pokaż więcej
Źródło :
Nature Communications. 10(1)
Czasopismo naukowe
Tytuł :
Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity
Autorzy :
Kaplan, Robert C.Aff1, Aff2
Wang, Zheng
Usyk, Mykhaylo
Sotres-Alvarez, Daniela
Daviglus, Martha L.
Schneiderman, Neil
Talavera, Gregory A.
Gellman, Marc D.
Thyagarajan, Bharat
Moon, Jee-Young
Vázquez-Baeza, YoshikiAff9, Aff10
McDonald, Daniel
Williams-Nguyen, Jessica S.
Wu, Michael C.
North, Kari E.
Shaffer, Justin
Sollecito, Christopher C.
Qi, Qibin
Isasi, Carmen R.
Wang, Tao
Knight, RobAff10, Aff11, Aff13, Aff14
Burk, Robert D.Aff1, Aff3, Aff15
Pokaż więcej
Źródło :
Genome Biology. 20(1)
Czasopismo naukowe
Tytuł :
GABA-modulating bacteria of the human gut microbiota
Autorzy :
Strandwitz, Philip
Kim, Ki HyunAff2, Aff3
Terekhova, Darya
Liu, Joanne K.
Sharma, AnukritiAff6, Aff7
Levering, Jennifer
McDonald, Daniel
Dietrich, David
Ramadhar, Timothy R.Aff2, Aff10
Lekbua, Asama
Mroue, Nader
Liston, Conor
Stewart, Eric J.
Dubin, Marc J.
Zengler, KarstenAff8, Aff9
Knight, RobAff8, Aff9, Aff11
Gilbert, Jack A.Aff6, Aff7, Aff12
Clardy, Jon
Lewis, Kim
Pokaż więcej
Źródło :
Nature Microbiology. 4(3):396-403
Czasopismo naukowe
Tytuł :
Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny
Autorzy :
Amato, Katherine R.
Mallott, Elizabeth K.
McDonald, DanielAff2, Aff3
Dominy, Nathaniel J.
Goldberg, Tony
Lambert, Joanna E.
Swedell, Larissa
Metcalf, Jessica L.
Gomez, Andres
Britton, Gillian A. O.
Stumpf, Rebecca M.
Leigh, Steven R.
Knight, RobAff2, Aff3, Aff12, Aff13
Pokaż więcej
Źródło :
Genome Biology. 20(1)
Czasopismo naukowe
Tytuł :
Regional variation limits applications of healthy gut microbiome reference ranges and disease models
Autorzy :
He, Yan
Wu, WeiAff2, Aff3
Zheng, Hui-MinAff1, Aff2
Li, PanAff1, Aff2
McDonald, Daniel
Sheng, Hua-Fang
Chen, Mu-Xuan
Chen, Zi-Hui
Ji, Gui-Yuan
Zheng, Zhong-Dai-Xi
Mujagond, Prabhakar
Chen, Xiao-Jiao
Rong, Zu-HuaAff1, Aff2
Chen, Peng
Lyu, Li-Yi
Wang, Xian
Wu, Chong-Bin
Yu, Nan
Xu, Yan-Jun
Yin, Jia
Raes, JeroenAff10, Aff11, Aff12
Knight, RobAff4, Aff13, Aff14
Ma, Wen-Jun
Zhou, Hong-WeiAff1, Aff2, Aff15
Pokaż więcej
Źródło :
Nature Medicine. 24(10):1532-1535
Czasopismo naukowe
Tytuł :
The impact of skin care products on skin chemistry and microbiome dynamics
Autorzy :
Bouslimani, Amina
da Silva, Ricardo
Kosciolek, Tomasz
Janssen, StefanAff2, Aff3
Callewaert, ChrisAff2, Aff4
Amir, Amnon
Dorrestein, Kathleen
Melnik, Alexey V.
Zaramela, Livia S.
Kim, Ji-Nu
Humphrey, Gregory
Schwartz, Tara
Sanders, Karenina
Brennan, Caitriona
Luzzatto-Knaan, Tal
Ackermann, Gail
McDonald, Daniel
Zengler, KarstenAff2, Aff5, Aff6
Knight, RobAff2, Aff5, Aff6, Aff7
Dorrestein, Pieter C.Aff1, Aff2, Aff5, Aff8
Pokaż więcej
Źródło :
BMC Biology. 17(1)
Czasopismo naukowe

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