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Wyświetlanie 1-16 z 16
Tytuł:
Allele frequency spectrum of known ankylosing spondylitis associated variants in a Swedish population.
Autorzy:
Mathioudaki, A
Nordin, J
Kastbom, A
Söderkvist, P
Eriksson, P
Cedergren, J
Lindblad-Toh, K
Meadows, JRS
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Temat:
ANKYLOSING spondylitis
GENE frequency
FREQUENCY spectra
MAJOR histocompatibility complex
HLA-B27 antigen
POLYMERASE chain reaction
Źródło:
Scandinavian Journal of Rheumatology; Jan 2022, Vol. 51 Issue 1, p21-24, 4p
Terminy geograficzne:
SWEDEN
Czasopismo naukowe
Tytuł:
Leveraging base-pair mammalian constraint to understand genetic variation and human disease.
Autorzy:
Sullivan PF; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.; Department of Medical Epidemiology and Biostatistics, Karolinska Institute, 17177 Stockholm, Sweden.
Meadows JRS; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Gazal S; Department of Population and Public Health Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.; Center for Genetic Epidemiology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Phan BN; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Li X; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Genereux DP; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Dong MX; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Bianchi M; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Andrews G; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Sakthikumar S; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Nordin J; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Roy A; Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, 75185 Uppsala, Sweden.
Christmas MJ; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Marinescu VD; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Wang C; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Wallerman O; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.
Xue J; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Center for System Biology, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Yao S; Department of Medical Epidemiology and Biostatistics, Karolinska Institute, 17177 Stockholm, Sweden.
Sun Q; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.
Szatkiewicz J; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.
Wen J; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.
Huckins LM; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Lawler A; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Keough KC; Gladstone Institutes, San Francisco, CA 94158, USA.; Department of Epidemiology and Biostatistics, University of California, San Francisco, CA 94158, USA.
Zheng Z; Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD 4072, Australia.
Zeng J; Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD 4072, Australia.
Wray NR; Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD 4072, Australia.
Li Y; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.
Johnson J; Department of Genetic and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Chen J; Department of Biostatistics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.
Paten B; UC Santa Cruz Genomics Institute, Santa Cruz, CA 95064, USA.
Reilly SK; Department of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
Hughes GM; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Weng Z; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Pollard KS; Gladstone Institutes, San Francisco, CA 94158, USA.; Department of Epidemiology and Biostatistics, University of California, San Francisco, CA 94158, USA.; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Pfenning AR; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Forsberg-Nilsson K; Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, 75185 Uppsala, Sweden.; Biodiscovery Institute, University of Nottingham, Nottingham NG7 2RD, UK.
Karlsson EK; Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Program in Molecular Medicine, UMass Chan Medical School, Worcester, MA 01605, USA.
Lindblad-Toh K; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 75132 Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
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Corporate Authors:
Zoonomia Consortium§
Źródło:
Science (New York, N.Y.) [Science] 2023 Apr 28; Vol. 380 (6643), pp. eabn2937. Date of Electronic Publication: 2023 Apr 28.
Typ publikacji:
Journal Article
MeSH Terms:
Genetic Variation*
Disease*/genetics
Animals ; Humans ; Biological Evolution ; Genome, Human ; Genome-Wide Association Study ; Genomics ; Molecular Sequence Annotation ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
Evolutionary constraint and innovation across hundreds of placental mammals.
Autorzy:
Christmas MJ; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Kaplow IM; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Genereux DP; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Dong MX; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Hughes GM; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Li X; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Morningside Graduate School of Biomedical Sciences, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Sullivan PF; Department of Genetics, University of North Carolina Medical School, Chapel Hill, NC 27599, USA.; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.
Hindle AG; School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV 89154, USA.
Andrews G; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Armstrong JC; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Bianchi M; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Breit AM; School of Biology and Ecology, University of Maine, Orono, ME 04469, USA.
Diekhans M; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Fanter C; School of Life Sciences, University of Nevada Las Vegas, Las Vegas, NV 89154, USA.
Foley NM; Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA.
Goodman DB; Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA 94143, USA.
Goodman L; Fauna Bio, Inc., Emeryville, CA 94608, USA.
Keough KC; Fauna Bio, Inc., Emeryville, CA 94608, USA.; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.
Kirilenko B; Faculty of Biosciences, Goethe-University, 60438 Frankfurt, Germany.; LOEWE Centre for Translational Biodiversity Genomics, 60325 Frankfurt, Germany.; Senckenberg Research Institute, 60325 Frankfurt, Germany.
Kowalczyk A; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lawless C; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Lind AL; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.
Meadows JRS; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Moreira LR; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Redlich RW; Department of Biological Sciences, Mellon College of Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Ryan L; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Swofford R; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Valenzuela A; Department of Experimental and Health Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.
Wagner F; Museum of Zoology, Senckenberg Natural History Collections Dresden, 01109 Dresden, Germany.
Wallerman O; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Brown AR; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Damas J; The Genome Center, University of California Davis, Davis, CA 95616, USA.
Fan K; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Gatesy J; Division of Vertebrate Zoology, American Museum of Natural History, New York, NY 10024, USA.
Grimshaw J; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Johnson J; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Kozyrev SV; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Lawler AJ; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Biological Sciences, Mellon College of Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Marinescu VD; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.
Morrill KM; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Morningside Graduate School of Biomedical Sciences, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Osmanski A; Medical Scientist Training Program, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Paulat NS; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Phan BN; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Medical Scientist Training Program, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Reilly SK; Department of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
Schäffer DE; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Steiner C; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.
Supple MA; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Wilder AP; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.
Wirthlin ME; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Allen Institute for Brain Science, Seattle, WA 98109, USA.
Xue JR; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.
Birren BW; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Gazal S; Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA.
Hubley RM; Institute for Systems Biology, Seattle, WA 98109, USA.
Koepfli KP; Center for Species Survival, Smithsonian's National Zoo and Conservation Biology Institute, Washington, DC 20008, USA.; Computer Technologies Laboratory, ITMO University, St. Petersburg 197101, Russia.; Smithsonian-Mason School of Conservation, George Mason University, Front Royal, VA 22630, USA.
Marques-Bonet T; Catalan Institution of Research and Advanced Studies (ICREA), 08010 Barcelona, Spain.; CNAG-CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08036 Barcelona, Spain.; Department of Medicine and Life Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.; Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallès, Barcelona, Spain.
Meyer WK; Department of Biological Sciences, Lehigh University, Bethlehem, PA 18015, USA.
Nweeia M; Department of Comprehensive Care, School of Dental Medicine, Case Western Reserve University, Cleveland, OH 44106, USA.; Department of Vertebrate Zoology, Canadian Museum of Nature, Ottawa, Ontario K2P 2R1, Canada.; Department of Vertebrate Zoology, Smithsonian Institution, Washington, DC 20002, USA.; Narwhal Genome Initiative, Department of Restorative Dentistry and Biomaterials Sciences, Harvard School of Dental Medicine, Boston, MA 02115, USA.
Sabeti PC; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.; Howard Hughes Medical Institute, Harvard University, Cambridge, MA 02138, USA.
Shapiro B; Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA 95064, USA.; Howard Hughes Medical Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Smit AFA; Institute for Systems Biology, Seattle, WA 98109, USA.
Springer MS; Department of Evolution, Ecology and Organismal Biology, University of California Riverside, Riverside, CA 92521, USA.
Teeling EC; School of Biology and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland.
Weng Z; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.
Hiller M; Faculty of Biosciences, Goethe-University, 60438 Frankfurt, Germany.; LOEWE Centre for Translational Biodiversity Genomics, 60325 Frankfurt, Germany.; Senckenberg Research Institute, 60325 Frankfurt, Germany.
Levesque DL; School of Biology and Ecology, University of Maine, Orono, ME 04469, USA.
Lewin HA; The Genome Center, University of California Davis, Davis, CA 95616, USA.; Department of Evolution and Ecology, University of California Davis, Davis, CA 95616, USA.; John Muir Institute for the Environment, University of California Davis, Davis, CA 95616, USA.
Murphy WJ; Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA.
Navarro A; Catalan Institution of Research and Advanced Studies (ICREA), 08010 Barcelona, Spain.; Department of Medicine and Life Sciences, Institute of Evolutionary Biology (UPF-CSIC), Universitat Pompeu Fabra, 08003 Barcelona, Spain.; BarcelonaBeta Brain Research Center, Pasqual Maragall Foundation, 08005 Barcelona, Spain.; CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08003 Barcelona, Spain.
Paten B; Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Pollard KS; Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94158, USA.; Gladstone Institutes, San Francisco, CA 94158, USA.; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Ray DA; Department of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Ruf I; Division of Messel Research and Mammalogy, Senckenberg Research Institute and Natural History Museum Frankfurt, 60325 Frankfurt am Main, Germany.
Ryder OA; Conservation Genetics, San Diego Zoo Wildlife Alliance, Escondido, CA 92027, USA.; Department of Evolution, Behavior and Ecology, School of Biological Sciences, University of California San Diego, La Jolla, CA 92039, USA.
Pfenning AR; Department of Computational Biology, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.; Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
Lindblad-Toh K; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, 751 32 Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.
Karlsson EK; Broad Institute of MIT and Harvard, Cambridge, MA 02139, USA.; Program in Bioinformatics and Integrative Biology, UMass Chan Medical School, Worcester, MA 01605, USA.; Program in Molecular Medicine, UMass Chan Medical School, Worcester, MA 01605, USA.
Pokaż więcej
Corporate Authors:
Zoonomia Consortium§
Źródło:
Science (New York, N.Y.) [Science] 2023 Apr 28; Vol. 380 (6643), pp. eabn3943. Date of Electronic Publication: 2023 Apr 28.
Typ publikacji:
Journal Article
MeSH Terms:
Eutheria*/genetics
Evolution, Molecular*
Animals ; Female ; Humans ; Conserved Sequence/genetics ; Genome, Human
Czasopismo naukowe
Tytuł:
Bayesian mixed model analysis uncovered 21 risk loci for chronic kidney disease in boxer dogs.
Autorzy:
Lingaas F; Faculty of Veterinary Medicine, Department of Preclinical Sciences and Pathology, Norwegian University of Life Sciences, Ås, Norway.
Tengvall K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Jansen JH; Faculty of Veterinary Medicine, Department of Preclinical Sciences and Pathology, Norwegian University of Life Sciences, Ås, Norway.
Pelander L; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Hurst MH; BioVet Veterinary Laboratory AB, Sollentuna, Sweden.
Meuwissen T; Faculty of Biosciences, Norwegian University of Life Sciences, Ås, Norway.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Sundström E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Thoresen SI; Faculty of Veterinary Medicine, Department of Preclinical Sciences and Pathology, Norwegian University of Life Sciences, Ås, Norway.
Arnet EF; Faculty of Veterinary Medicine, Department of Preclinical Sciences and Pathology, Norwegian University of Life Sciences, Ås, Norway.
Guttersrud OA; Faculty of Veterinary Medicine, Department of Preclinical Sciences and Pathology, Norwegian University of Life Sciences, Ås, Norway.
Kierczak M; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Hytönen MK; Department of Medical and Clinical Genetics, University of Helsinki, Helsinki, Finland.; Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.; Folkhälsan Research Center, Helsinki, Finland.
Lohi H; Department of Medical and Clinical Genetics, University of Helsinki, Helsinki, Finland.; Department of Veterinary Biosciences, University of Helsinki, Helsinki, Finland.; Folkhälsan Research Center, Helsinki, Finland.
Hedhammar Å; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
Wang C; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
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Źródło:
PLoS genetics [PLoS Genet] 2023 Jan 24; Vol. 19 (1), pp. e1010599. Date of Electronic Publication: 2023 Jan 24 (Print Publication: 2023).
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Genome-Wide Association Study*
Renal Insufficiency, Chronic*/genetics
Renal Insufficiency, Chronic*/veterinary
Renal Insufficiency, Chronic*/epidemiology
Dogs ; Humans ; Animals ; Bayes Theorem ; Kidney ; Alleles ; Polymorphism, Single Nucleotide
Czasopismo naukowe
Tytuł:
Bayesian model and selection signature analyses reveal risk factors for canine atopic dermatitis.
Autorzy:
Tengvall K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .
Sundström E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Wang C; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Bergvall K; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Wallerman O; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Pederson E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Harvey ND; School of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington Campus, Leicestershire, UK.
Blott SC; School of Veterinary Medicine and Science, University of Nottingham, Sutton Bonington Campus, Leicestershire, UK.
Olby N; Department of Clinical Sciences, North Carolina State University, Raleigh, NC, USA.
Olivry T; Department of Clinical Sciences, North Carolina State University College of Veterinary Medicine, Raleigh, NC, USA.
Brander G; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Roosje P; Division of Clinical Dermatology, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Leeb T; Institute of Genetics, Vetsuisse Faculty, University of Bern, Bern, Switzerland.
Hedhammar Å; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Andersson G; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .; Broad Institute of MIT and Harvard, Cambridge, MA, USA. .
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Źródło:
Communications biology [Commun Biol] 2022 Dec 08; Vol. 5 (1), pp. 1348. Date of Electronic Publication: 2022 Dec 08.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Dogs*/genetics
Dermatitis, Atopic*/genetics
Dermatitis, Atopic*/veterinary
Animals ; Bayes Theorem ; Risk Factors
Czasopismo naukowe
Tytuł:
Interpretable machine learning identifies paediatric Systemic Lupus Erythematosus subtypes based on gene expression data.
Autorzy:
Yones SA; Science for Life Laboratory, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden. .
Annett A; Science for Life Laboratory, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Stoll P; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland.
Diamanti K; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
Holmfeldt L; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Sweden.
Barrenäs CF; Science for Life Laboratory, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Komorowski J; Science for Life Laboratory, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden. .; Washington National Primate Research Center, Seattle, USA. .; Swedish Collegium for Advanced Study, Uppsala, Sweden. .; The Institute of Computer Science, Polish Academy of Sciences, Warsaw, Poland. .
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Źródło:
Scientific reports [Sci Rep] 2022 May 06; Vol. 12 (1), pp. 7433. Date of Electronic Publication: 2022 May 06.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
MeSH Terms:
Gene Expression Profiling*/methods
Lupus Erythematosus, Systemic*
Child ; Gene Expression ; Gene Regulatory Networks ; Humans ; Machine Learning
Czasopismo naukowe
Tytuł:
The ABCC4 gene is associated with pyometra in golden retriever dogs.
Autorzy:
Arendt M; Faculty of Health and Medical Sciences, Department of Veterinary Clinical Sciences, University of Copenhagen, Copenhagen, Denmark. .; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .
Ambrosen A; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Fall T; Department of Medical Sciences, Molecular Epidemiology and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Kierczak M; Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Tengvall K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Lagerstedt AS; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Bergström T; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Andersson G; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Hagman R; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden. .
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Źródło:
Scientific reports [Sci Rep] 2021 Aug 17; Vol. 11 (1), pp. 16647. Date of Electronic Publication: 2021 Aug 17.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
ATP-Binding Cassette Transporters/*genetics
Dog Diseases/*genetics
Pyometra/*veterinary
Age of Onset ; Animals ; Case-Control Studies ; Chromosome Mapping ; Dogs ; Female ; Gene Frequency ; Genetic Predisposition to Disease ; Genome-Wide Association Study ; Polymorphism, Single Nucleotide ; Pyometra/genetics
Czasopismo naukowe
Tytuł:
Author Correction: Targeted sequencing reveals the somatic mutation landscape in a Swedish breast cancer cohort.
Autorzy:
Mathioudaki A; Science for Life Laboratory, Department of Medical Sciences, Uppsala University, Uppsala, Sweden. .
Ljungström V; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Melin M; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Arendt ML; Department of Veterinary Clinical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Nordin J; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Murén E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Saksena P; Department of Clinical Pathology and Genetics, Sahlgrenska University Hospital, Gothenburg, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Marinescu VD; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Sjöblom T; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .; Broad Institute of MIT and Harvard, Cambridge, MA, USA. .
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Źródło:
Scientific reports [Sci Rep] 2021 Mar 01; Vol. 11 (1), pp. 5310. Date of Electronic Publication: 2021 Mar 01.
Typ publikacji:
Published Erratum
Tytuł:
A novel canine reference genome resolves genomic architecture and uncovers transcript complexity.
Autorzy:
Wang C; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .
Wallerman O; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Arendt ML; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Department of Veterinary Clinical Sciences, University of Copenhagen, Frederiksberg D, Denmark.
Sundström E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Nordin J; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Mäkeläinen S; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Pielberg GR; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Hanson J; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Ohlsson Å; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Saellström S; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Rönnberg H; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Ljungvall I; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Häggström J; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Bergström TF; Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Hedhammar Å; Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .; Broad Institute of MIT and Harvard, Cambridge, MA, USA. .
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Źródło:
Communications biology [Commun Biol] 2021 Feb 10; Vol. 4 (1), pp. 185. Date of Electronic Publication: 2021 Feb 10.
Typ publikacji:
Comparative Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
MeSH Terms:
Genetic Variation*
Genome*
Transcriptome*
Gene Expression Profiling/*standards
Genomics/*standards
Transcription Factors/*genetics
Animals ; Dogs ; Female ; Genotype ; INDEL Mutation ; Phenotype ; Polymorphism, Single Nucleotide ; RNA-Seq/standards ; Reference Values ; Transcription Factors/metabolism
Czasopismo naukowe
Tytuł:
Targeted sequencing reveals the somatic mutation landscape in a Swedish breast cancer cohort.
Autorzy:
Mathioudaki A; Science for Life Laboratory, Department of Medical Sciences, Uppsala University, Uppsala, Sweden. .
Ljungström V; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Melin M; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Arendt ML; Department of Veterinary Clinical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Nordin J; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Karlsson Å; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Murén E; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Saksena P; Department of Clinical Pathology and Genetics, Sahlgrenska University Hospital, Gothenburg, Sweden.
Meadows JRS; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Marinescu VD; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Sjöblom T; Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Rudbeck Laboratory, Uppsala, Sweden.
Lindblad-Toh K; Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. .; Broad Institute of MIT and Harvard, Cambridge, MA, USA. .
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Źródło:
Scientific reports [Sci Rep] 2020 Nov 09; Vol. 10 (1), pp. 19304. Date of Electronic Publication: 2020 Nov 09.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Gene Expression Regulation, Neoplastic*
Mutation*
Biomarkers, Tumor/*genetics
Breast Neoplasms/*genetics
APOBEC-1 Deaminase/genetics ; Adult ; Aged ; Aged, 80 and over ; Algorithms ; Animals ; Antigens, CD/genetics ; Cadherin Related Proteins ; Cadherins/genetics ; Cell Cycle Proteins/genetics ; Class I Phosphatidylinositol 3-Kinases/genetics ; Cyclin-Dependent Kinases/genetics ; DNA Mutational Analysis ; DNA-Binding Proteins/genetics ; Dogs ; Female ; Gene Dosage ; Humans ; Middle Aged ; Oligonucleotide Array Sequence Analysis ; Polymorphism, Single Nucleotide ; Proto-Oncogene Proteins/genetics ; Sequence Analysis, DNA ; Sweden/epidemiology ; Transcription Factors/genetics ; Tumor Suppressor Protein p53/genetics
Czasopismo naukowe
Tytuł:
A potential regulatory region near the EDN3 gene may control both harness racing performance and coat color variation in horses.
Autorzy:
Jäderkvist Fegraeus K; Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Velie BD; Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Axelsson J; Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Ang R; Faculty of Science, University of Sydney, Sydney, Australia.
Hamilton NA; Faculty of Science, University of Sydney, Sydney, Australia.
Andersson L; Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.; Department of Veterinary Integrative Biosciences, Texas A&M University, College Station, Texas.
Meadows JRS; Department of Medical Biochemistry and Microbiology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Lindgren G; Department of Animal Breeding & Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
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Źródło:
Physiological reports [Physiol Rep] 2018 May; Vol. 6 (10), pp. e13700.
Typ publikacji:
Journal Article; Research Support, Non-U.S. Gov't
MeSH Terms:
Regulatory Sequences, Nucleic Acid*
Running*
Selective Breeding*
Endothelin-3/*genetics
Horses/*genetics
Animals ; Female ; Gene Frequency ; Haplotypes ; Male ; Norway ; Polymorphism, Single Nucleotide ; Sweden
Czasopismo naukowe
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